# Database: RMSF (Integerized Interval) DB # Date of preparation: Jan.3, 2007 # Total number of sequences: 1997 # Total number of residues: 182751 # Size: 468.078 kB # Version: 1 # This database consists of a subset of non-redundant proteins in the PDB selected from the PISCES server [1] that were solved by NMR and for which multiple chain models exist. The RMSF values were determined from the PDB files using RMSF values calculated from GROMACS [2] and integerized by multiplying the RMSF values by 10 and rounding to the nearest integer. # Database Example Format File: # >Sequence name to 25 characters; SwissProt ID; PDB ID # MEILPQCDFKLGGAPRALDNQAGTRKEALKHLIAVNMAQPGDSGG # 984328231023213987543211219384787432349999223 # ANGLKCNMCSVLRIAGSSTHQNELANGAILVTQNGCLDIPANNAL # 328321039485023942129383249857293842929112345 # INASSTGLK # 123923845 # where # 0=0-0.30 Angstroms RMSF # 1=0.31-0.60 Angstroms RMSF # 2=0.61-0.90 B Angstroms RMSF # etc. etc. # Reference: # 1. Wang G, Dunbrack RL Jr. PISCES: a protein sequence culling server. Bioinformatics. 2003 Aug 12;19(12):1589-91. # 2. Van Der Spoel D, Lindahl E, Hess B, Groenhof G, Mark AE, Berendsen HJ. GROMACS: fast, flexible, and free. J Comput Chem. 2005 Dec;26(16):1701-18. >CALCYCLIN (RABBIT, CA2+); SWP:P30801; PDB:1A03A MASPLDQAIGLLIGIFHKYSGKEGDKHTLSKKELKELIQKELTIG 642111111111011011111233321111111111112222344 SKLQDAEIVKLMDDLDRNKDQEVNFQEYITFLGALAMIYNEALKG 443332222111122123221100000001101111122223245 >INTESTINAL FATTY ACID-BIN; SWP:P02693; PDB:1A57_ AFDGTWKVDRNENYSGAHDNLKLTITQEGNKFTVKESSNFRNIDV 110000001245676654311000001111000000011111100 VFELGVDFAYSLADGTELTGTWTMEGNKLVGKFKRVDNGKELIAV 000100000001111100000000110000000001112100000 REISGNELIQTYTYEGVEAKRIFKKE 00011000000000110000100001 >TUMOR SUPPRESSOR P16INK4A; SWP:P42771; PDB:1A5E_ MEPAAGSSMEPSADWLATAAARGRVEEVRALLEAGALPNAPNSYG 999999764332100000000000000000000000000010100 RRPIQVMMMGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF 100000000000000000000000000000000000000000000 LDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAG 000000000000000000011000000000000000000000001 GTRGSNHARIDAAEGPSDIPD 224566677999999999999 >B-MYB; SWP:Q03237; PDB:1A5J_ GIPDLVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQC 999999999888755543355468878876654554568887876 RERWHNHLNPEVKKSSWTEEEDRIIFEAHKVLGNRWAEIAKLLPG 654345544455788643453355467779997654554567687 RTDNAVKNHWNSTIKRKVDT 65465356568877999999 >GAG POLYPROTEIN; SWP:P03322; PDB:1A6S_ GEAVIKVISSACKTYCGKTSPSKKEIGAMLSLLQKEGLLMSPSDL 110000000000000001122210000000000000011111111 YSPGSWDPITAALSQRAMILGKSGELKTWGLVLGALKAAREE 111100000000000001123331100000000000000001 >INSULIN; SWP:P01308; PDB:1A7FA GIVEQCCTSICSLYQLENYCN ------8-5------------ >LEUKEMIA INHIBITORY FACTO; SWP:P15018; PDB:1A7M_ SPLPITPVNATCAIRHPCHGNLMNQIKNQLAQLNGSANALFISYY 998776543221233222221010000000000000000000000 TAQGEPFPNNLDKLCGPNVTDFPPFHANGTEKAKLVELYRMVAYL 000000000000000112221000001110000000000000000 SASLTNITRDQKVLNPSAVSLHSKLNATIDVMRGLLSNVLCRLCN 000000000000000000000000000000000000000000124 KYRVGHVDVPPVPDHSDKEVFQKKKLGCQLLGTYKQVISVVVQAF 211122111121110110000000000000000000000000000 >ALPHA-T-ALPHA; SWP:NA; PDB:1ABZ_ DWLKARVEQELQALEARGTDSNAELRAMEAKLKAEIQK 11000000000000011121111100000000011112 >NATURAL SCORPION PEPTIDE; SWP:P56215; PDB:1ACW_ VSCEDCPEHCSTQKAQAKCDNDKCVCEPI 00000000000000000000000000001 >P22 C2 REPRESSOR; SWP:P69202; PDB:1ADR_ MNTQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEP 754210000000000000000000000000000000000111000 NGENLLALSKALQCSPDYLLKGDLSQTNVAY 0000000000000000000111134668899 >ACTINORHODIN POLYKETIDE S; SWP:Q02054; PDB:1AF8_ MATLLTTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLAL 653110000000000111223443223210011001112110110 METAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA 00000011111111111110100000000000000000012 >MERP; SWP:P04129; PDB:1AFI_ ATQTVTLAVPGMTCAACPITVKKALSKVEGVSKVDVGFEKREAVV 000000000000000000000000000000000000000000000 TFDDTKASVQKLTKATADAGYPSSVKQ 000000000000000000000000001 >ANTIFUNGAL PROTEIN FROM A; SWP:P17737; PDB:1AFP_ ATYNGKCYKKDNICKYKAQSGKTAICKCYVKKCPRDGAKCEFDSY 000000000000000001112221000011000000000000011 KGKCYC 110000 >OMEGA-AGATOXIN-IVB; SWP:P37045; PDB:1AGG_ EDNCIAEDYGKCTWGGTKCCRGRPCRCSMIGTNCECTPRLIMEGL 631000000000001100000000000000000000013468999 SFA 999 >AGITOXIN 2; SWP:P46111; PDB:1AGT_ GVPINVSCTGSPQCIKPCKDAGMRFGKCMNRKCHCTPK 00000000000000000000000000000000000001 >SERINE PROTEASE PB92; SWP:P27693; PDB:1AH2_ AQSVPWGISRVQAPAAHNRGLTGSGVKVAVLDTGISTHPDLNIRG 321100010000000000010000000000001110100000000 GASFVPGEPSTQDGNGHGTHVAGTIAALNNSIGVLGVAPNAELYA 000011332101110000000000000011111000000000000 VKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLGSPSPSATLEQ 000011321100000000000000010000000011111110000 AVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQNNNR 000000000000000011222110000001210000000112211 ASFSQYGAGLDIVAPGVNVQSTYPGSTYASLNGTSMATPHVAGAA 111111111000000000000001111000000000000000000 ALVKQKNPSWSNVQIRNHLKNTATSLGSTNLYGSGLVNAEAATR 00000001100000000000000011223211110000000001 >INITIATION FACTOR 1; SWP:P69222; PDB:1AH9_ AKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIR 542100000000000000000000000000000000111111121 ILTGDKVTVELTPYDLSKGRIVFRSR 00000000000011000000001357 >ANTHOPLEURIN-A; SWP:P01530; PDB:1AHL_ GVSCLCDSDGPSVRGNTLSGTLWLYPSGCPSGWHNCKAHGPTIGW 100000111234554211000000000000000000011101100 CCKQ 0000 >ENDOGLUCANASE Z; SWP:P07103; PDB:1AIW_ MGDCANANVYPNWVSKDWAGGQPTHNEAGQSIVYKGNLYTANWYT 421111000000000122221100000000000000000000000 ASVPGSDSSWTQVGSCN 00000111000000012 >TROPONIN C; SWP:P09860; PDB:1AJ4_ ADIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMR 000000000000000000000000000000000000000000000 MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 000000000000000000000000000000000000000000000 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEEL 000000000000000000000000000000000000000000000 MKDGDKNNDGRIDYDEFLEFMKGVE 0000000000000000000000000 >APOKEDARCIDIN; SWP:P41249; PDB:1AKP_ ASAAVSVSPATGLADGATVTVSASGFATSTSATALQCAILADGRG 210000000000000000000000001000000000000000000 ACNVAEFHDFSLSGGEGTTSVVVRRSFTGYVMPDGPEVGAVDCDT 000000000000110000000000000000011101000000000 APGGCEIVVGGNTGEYGNAAISFG 000000000000110000000001 >P11; SWP:P00390; PDB:1ALG_ QGLGCDEMLQGFAVAVKMGATKAD 643000000000000000123434 >AMYLOID BETA-PEPTIDE; SWP:P05067; PDB:1AMB_ DAEFRHDSGYEVHHQKLVFFAEDVGSNK 0000000000000000000000000000 >ARGININE REPRESSOR; SWP:P0A6D0; PDB:1AOY_ MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSK 976421000000000000000000000000000000000000000 VSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTT 000000000000000000000000011234679 >MODIFIER PROTEIN 1; SWP:P83917; PDB:1AP0_ HMVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTW 999999999875310000000000010000000001122210000 EPEENLDCPDLIAEFLQSQKTAHETDKS 0000000000000000111233456799 >TRANSLATION INITIATION FA; SWP:P07260; PDB:1AP8_ MSVEEVSKKFEENVSVDDTTATPKTVLSDSAHFDVKHPLNTKWTL 999999999999999999999999999997644332111100000 WYTKPAVDKSESWSDLLRPVTSFQTVEEFWAIIQNIPEPHELPLK 000012322210000000000000000000000000001000000 SDYHVFRNDVRPEWEDEANAKGGKWSFQLRGKGADIDELWLRTLL 000000011010000000001000000000111100000000000 AVIGETIDEDDSQINGVVLSIRKGGNKFALWTKSEDKEPLLRIGG 000111222121100000000111100000000110000000000 KFKQVLKLTDDGHLEFFPHSSANGRHPQPSITL 000000111222100000000011223211011 >ANTHOPLEURIN-B; SWP:P01531; PDB:1APF_ GVPCLCDSDGPRPRGNTLSGILWFYPSGCPSGWHNCKAHGPNIGW 000000012344565321000000000000000000000000000 CCKK 0000 >FIBRILLIN; SWP:P35555; PDB:1APJ_ SAQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWGDPC --1100000000000100000000000000000000000000000 ELCPTEPDEAFRQICPYGSGIIVGPDDSA 00000000000000001011113234457 >EGF-LIKE MODULE OF BLOOD; SWP:P00743; PDB:1APO_ KDGDQCEGHPCLNQGHCKDGIGDYTCTCAEGFEGKNCEFSTR 422200121000000000011100000000000000000001 >COMPLEMENT PROTEASE C1R; SWP:P00736; PDB:1APQ_ AVDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQE 765311124467889877541000000000100000000100001 DRHSCQAE 10000002 >ACYLPHOSPHATASE; SWP:P00818; PDB:1APS_ STARPLKSVDYEVFGRVQGVCFRMYAEDEARKIGVVGWVKNTSKG 533210000000012322211111110000011000000011222 TVTGQVQGPEEKVNSMKSWLSKVGSPSSRIDRTNFSNEKTISKLE 100000002011100000000112233321210001000001111 YSNFSVRY 11000111 >CARTILAGE MATRIX PROTEIN; SWP:P05099; PDB:1AQ5A GSHMEEDPCECKSIVKFQTKVEELINTLQQKLEAVAKRIEALENK 999742100000000000000000000000000000000000000 II 00 >NEBULIN; SWP:P20929; PDB:1ARK_ TAGKIFRAMYDYMAADADEVSFKDGDAIINVQAIDEGWMYGTVQR 532110000000001111000000000011111122100000000 TGRTGMLPANYVEAI 000000000000001 >ASCARIS TRYPSIN INHIBITOR; SWP:P19398; PDB:1ATA_ EAEKCTKPNEQWTKCGGCEGTCAQKIVPCTRECKPPRCECIASAG 000000000000000000000000000000000000000000000 FVRDAQGNCIKFEDCPK 00000000000000000 >ATX IA; SWP:P01533; PDB:1ATX_ GAACLCKSDGPNTRGNSMSGTIWVFGCPSGWNNCEGRAIIGYCCK 100000112334354311100000111111000001111100000 Q 1 >SACY; SWP:P15401; PDB:1AUUA MKIKRILNHNAIVVKDQNEEKILLGAGIAFNKKKNDIVDPSKIEK 000000000000000000000000000000000000000000000 TFIRKDTPDY 0000111333 >SPOIIAA; SWP:P10727; PDB:1AUZ_ SLGIDMNVKESVLCIRLTGELDHHTAETLKQKVTQSLEKDDIRHI 100000000000000000000000000000000000000000000 VLNLEDLSFMDSSGLGVILGRYKQIKQIGGEMVVCAISPAVKRLF 000000000000000000000000001120000000000000000 DMSGLFKIIRFEQSEQQALLTLGVAS 00000000000000000000000101 >MENKES COPPER-TRANSPORTIN; SWP:Q04656; PDB:1AW0_ LTQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTV 100000000000100000000000000000000000000000000 EYDPLLTSPETLRGAIEDMGFDATLSD 000000000000000000000000002 >BRUTON'S TYROSINE KINASE; SWP:Q06187; PDB:1AWW_ GSMSTSELKKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWR 999754321000000000000000000000000000011100000 ARDKNGQEGYIPSNYVTEAEDS 0000000000000000000135 >ATRACOTOXIN-HVI; SWP:P56207; PDB:1AXH_ SPTCIPSGQPCPYNENCCSQSCTFKENENGNTVKRCD 4200000000000000000000000000000000000 >ANTIFUNGAL PROTEIN 1; SWP:P30231; PDB:1AYJ_ KLCERPSGTWSGVCGNNNACKNQCINLEKARHGSCNYVFPAHKCI 100000110010000000000000000000000000111110000 CYFPC 00011 >CELLOBIOHYDROLASE I; SWP:P62694; PDB:1AZ6_ TQSHAGQCGGIGYSGPTVCASGTTCQVLNPYYSQCL 443331001112233432222221000000000001 >PROTEIN (PRION PROTEIN); SWP:P04273; PDB:1B10A LGGYMLGSAMSRPMMHFGNDWEDRYYRENMNRYPNQVYYRPVDQY 111000000011111101000000000000000000000000011 NNQNNFVHDCVNITIKQHTVTTTTKGENFTETDIKIMERVVEQMC 100000000000000000000000110000000000000000000 TTQYQKESQAYYDG 00000000000012 >PROTEIN (PLASMATOCYTE-SPR; SWP:O61704; PDB:1B1VA ENFNGGCLAGYMRTADGRCKPTF 64321000000000000000001 >DNA REPAIR PROTEIN RAD51; SWP:Q06609; PDB:1B22A MAMQMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAG ---------------322221100000000000000000000000 FHTVEAVAYAPKKELINIKGISEAKADKILAEAAKLVPMGFTTAT 0000001110000000000000000000000000000124----- EFHQRRSEIIQITTGSKELDKLLQ ------------------------ >PROTEIN (NEUROTOXIN CSE-I; SWP:P01491; PDB:1B3CA KDGYLVEKTGCKKTCYKLGENDFCNRECKWKHIGGSYGYCYGFGC 100000111111000000000000000011121111000000000 YCEGLPDSTQTWPLPNKTC 0000011111001112222 >PROTEIN (S-100 PROTEIN, B; SWP:P04631; PDB:1B4CA MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFL 000000000000000000000000000000000000000000000 EEIKEQEVVDKVMETLDEDGDGECDFQEFMAFVSMVTTACHEFFE 000000000000000000000000000000000000000011111 HE 11 >PROTEIN (HUMAN THIOLTRANS; SWP:P35754; PDB:1B4QA AQEFVNSKIQPGKVVVFIKPTCPYSRRAQEILSQLPIKQGLLEFV 000000000000000000000000000000000000000000000 DITATNHTNEIQDYLQQLTGARTVPRVFIGKDSIGGSSDLVSLQQ 000000000000000000000000000000000000000000000 SGELLTRLKQIGALQ 000000000000000 >PROTEIN (PKD1_HUMAN); SWP:P98161; PDB:1B4RA ATLVGPHGPLASGQLAAFHIAAPLPVTATRWDFGDGSAEVDAAGP 000000000000000000000000000000000000000000000 AASHRYVLPGRYHVTAVLALGAGSALLGTDVQVEA 00000000000000000000000000000000000 >MIP-1A; SWP:P10147; PDB:1B50A SLAADTPTACCFSYTSRQIPQNFIAAYFETSSQCSKPGVIFLTKR 998764321111111110000000000001122121110000000 SRQVCADPSEEWVQKYVSDLELSA 010000011000000001124666 >ELONGATION FACTOR 1-BETA; SWP:P24534; PDB:1B64_ MLVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVP 531000000000000000000000000000000100000000000 VGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNK 111000000000000110000000000000000000000000000 I 1 >PROTEIN (MAJOR POLLEN ALL; SWP:P15494; PDB:1B6FA GVFNYETETTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIE 100000000000000000000000000000000000000000000 GNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGP 111000000000001222110000000000000000000000000 IGDTLEKISNEIKIVATPDGGSILKISNKYHTKGDHEVKAEQVKA 011000000000000001110000000000000110000000000 SKELGETLLRAVESYLLAHSDAYN 000000000000000000123467 >PROTEIN (CRP1); SWP:P67966; PDB:1B8TA MPNWGGGKKCGVCQKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLD 999999999999999999999999999999999999999999999 STTVAVHGDEIYCKSCYGKKYGPKGKGKGMGAGTLSTDKGESLGI 999999999999999999999999999999999999999999999 KYEEGQSHRPTNPNASRMAQKVGGSDGCPRCGQAVYAAEKVIGAG 999999999999999999999999999999999999999999999 KSWHKSCFRCAKCGKSLESTTLADKDGEIYCKGCYAKNFGPKGFG 999999999999999999999999999999999999999999999 FGQGAGALIHSQ 999999999999 >PROTEIN (DEFENSIN-LIKE PE; SWP:P82172; PDB:1B8WA FVQHRPRDCESINGVCRHKDTVNCREIFLADCYNDGQKCCRK 643211000000000000000000000000000000000000 >PROTEIN (COLLAGEN ALPHA 1; SWP:P32018; PDB:1B9PA CAVELRSPGISRFRRKIAKRSIKTLEHKRENAKE 0000000000000000000000000000000000 >PROTEIN (TERPREDOXIN); SWP:P33007; PDB:1B9RA PRVVFIDEQSGEYAVDAQDGQSLMEVATQNGVPGIVAECGGSCVC 000000000000000000000000000000000111111111111 ATCRIEIEDAWVEIVGEANPDENDLLQSTGEPMTAGTRLSCQVFI 010000000000000011000000000011110010000000000 DPSMDGLIVRVPLPA 000000000001124 >G-PROTEIN COUPLED RECEPTO; SWP:P25098; PDB:1BAK_ GSHMGKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGEA 998542100000000001121111100000000000000012332 PQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFILQCDSDPELV 210000000000000000000000000000000000000000000 QWKKELRDAYREAQQLVQRVPKMKNKPRS 00000000000000010113467789999 >DIHYDROLIPOAMIDE SUCCINYL; SWP:P0AFG6; PDB:1BAL_ YASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVE 998987776532111000000000011111111122211000000 KHLAKA 001246 >BOVINE PANCREATIC POLYPEP; SWP:P01302; PDB:1BBA_ APLEPEYPGDNATPEQMAQYAAELRRYINMLTRPRY 000000000000000000000000000000000000 >HUMAN ENHANCER-BINDING PR; SWP:P15822; PDB:1BBO_ KYICEECGIRKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLT ----1-----10000000000000000000000000000000000 KHMKSKAHSKK 00000111124 >7-FE FERREDOXIN; SWP:Q45560; PDB:1BC6_ AYVITEPCIGTKDASCVEVCPVDCIHEGEDQYYIDPDVCIDCGAC 000000000012211000000000000000000000000001100 EAVCPVSAIYHEDFVPEEWKSYIQKNRDFFKK 00001100000000000000000000000013 >VPR PROTEIN; SWP:P12520; PDB:1BDE_ YGDTWAGVEAIIRILQQLLFIHFRIGCRHSRIG 321000000000000000000000000011346 >BDS-I; SWP:P11494; PDB:1BDS_ AAPCFCSGKPGRGDLWILRGTCPGGYGYTSNCYKWPNICCYPH 0000000000000000000000000000000000000000000 >CALCICLUDINE; SWP:P81658; PDB:1BF0_ WQPPWYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNAN 000000000000001111000000000000000000000110110 RFQTIGECRKKCLGK 000000000000000 >CHAPERONE PROTEIN FIMC; SWP:P31697; PDB:1BF8_ GVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKD 211111110001112210000001111100000000001111111 GRFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAI 100000000000001110000000001121111111000000000 PSMDKSKLTENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRR 113467899986432111110000000111111100000000000 SANSLTLINPTPYYLTVTELNAGTRVLENALVPPMGESTVKLPSD 111000000000000000000001000000000100000000111 AGSNITYRTINDYGALTPKMTGVM 111000000111111111111001 >BGK; SWP:P29186; PDB:1BGK_ VCRDWFKETACRHAKSLGNCRTSQKYRANCAKTCELC 1100000000000000000000000000000000001 >MELITTIN; SWP:P01501; PDB:1BH1_ GIGAVLKVLTTGLPALISWIKRKRQQ 21110000011000000000000001 >CIRCULIN A; SWP:P56871; PDB:1BH4_ CGESCVWIPCISAALGCSCKNKVCYRNGIP 456678764310000014579874445666 >CRE-BP1; SWP:NA; PDB:1BHI_ MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG 86532000011111000000000000000000123356 >TOXIN BMTX1; SWP:NA; PDB:1BIG_ FTDVKCTGSKQCWPVCKQMFGKPNGKCMNGKCRCYS 001100000000000000000000000000000001 >PROTEIN DISULFIDE ISOMERA; SWP:NA; PDB:1BJX_ AATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAID 000000000000000000000000000000000000000000001 DIPFGITSNSDVFSKYQLDKDGVVLFKKFDEGRNNFEGEVTKENL 000000000000000000000000000000000000000000000 LDFIKHNQLPLVIEFTEQTA 00000000112345799999 >ANTIMICROBIAL PROTEIN 1; SWP:NA; PDB:1BK8_ LCNERPSQTWSGNCGNTAHCDKQCQDWEKASHGACHKRENHWKCF 000000000010001000000000000000000000000000000 CYFNC 00000 >BMKTX; SWP:NA; PDB:1BKT_ VGINVKCKHSGQCLKPCKDAGMRFGKCINGKCDCTPK 1000000000000000000000000000000000000 >CALCITONIN; SWP:NA; PDB:1BKU_ CSNLSTCVLGKLSQELHKLQTYPRTDVGAGTP 11100000000000000001234566789999 >PARATHYROID HORMONE RECEP; SWP:NA; PDB:1BL1_ SEAVKFLTNETREREVFDRLGMIYTVGYSVC 0000000000000000000000000000000 >P55 BLK PROTEIN TYROSINE; SWP:NA; PDB:1BLJ_ GSVAPVETLEVEKWFFRTISRKDAERQLLAPMNKAGSFLIRESES 998766544321000010000000000000000000000000001 NKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQA 110000000000011000000000000001000000000000000 LVQHYSKKGDGLCQKLTLPCVNLA 000000001000000000001124 >PROTEIN (MOLONEY MURINE L; SWP:NA; PDB:1BM4A CAKVKGITQGPNESPSAFLERLKEAYRRYTPY 99999999996532110000000000001134 >LQH III ALPHA-LIKE TOXIN; SWP:NA; PDB:1BMR_ VRDGYIAQPENCVYHCFPGSSGCDTLCKEKGGTSGHCGFKVGHGL 000000001110000011100000000000000000000111000 ACWCNALPDNVGIIVEGEKCHS 0000000000000012321112 >POLLEN ALLERGEN PHL P2; SWP:NA; PDB:1BMW_ VPKVTFTVEKGSNEKHLAVLVKYEGDTMAEVELREHGSDEWVAMT 321000000111111100000111111000000011112000000 KGEGGVWTFDSEEPLQGPFNFRFLTEKGMKNVFDDVVPEKYTIGA 011100000111122210000000001100000000011111111 TYAP 1111 >BOVINE NEUTROPHIL BETA-DE; SWP:NA; PDB:1BNB_ APLSCGRNGGVCIPIRCPVPMRQIGTCFGRPVKCCRSW 86531121100000001011000000000000000012 >TRANSCRIPTION FACTOR PML; SWP:NA; PDB:1BOR_ EEEFQFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQA 000000000000000000000000000000000000000000000 PWPLGADTPAL 00000000000 >TITIN; SWP:NA; PDB:1BPV_ SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLP 110000000000000000000000000000000100000000000 NGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAKNAAGAISPPS 101000000100000000000000000000000001000000000 EPSDAITCRDDVEA 00000000000112 >PROTEIN (GROWTH-BLOCKING; SWP:NA; PDB:1BQFA ENFSGGCVAGYMRTPDGRCKPTFYQ 9986421000000001000000124 >ETS-1; SWP:NA; PDB:1BQV_ MECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPRQWT 999999999999999987654432211101000100000000000 ETHVRDWVMWAVNEFSLKGVDFQKFCMSGAALCALGKECFLELAP 000000000000000001000000000000000000000000000 DFVGDILWEHLEILQKEDVK 00000000000000012246 >PROTEIN G; SWP:NA; PDB:1BRV_ VPCSTCEGNLACLSLCHIE 1000000000000000113 >BRAZZEIN; SWP:NA; PDB:1BRZ_ DKCKKVYENYPVSKCQLANQCNYDCKLDKHARSGECFYDEKRNLQ 320000011111111111000000000000000000012322100 CICDYCEY 00000134 >BARWIN, BASIC BARLEY SEED; SWP:NA; PDB:1BW3_ EQANDVRATYHYYRPAQNNWDLGAPAVSAYCATWDASKPLSWRSK 000000000111121111111121221100011111111010011 YGWTAFCGPAGPRGQAACGKCLRVTNPATGAQITARIVDQCANGG 111001111111111100000000000000000000000111221 LDLDWDTVFTKIDTNGIGYQQGHLNVNYQFVDCRD 11121110000111211111110000000000001 >INSULIN GENE ENHANCER PRO; SWP:NA; PDB:1BW5_ MKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPR 875433211100000000000000000000000000000000000 VIRVWFQNKRCKDKKRSIMMK 000000000001123345679 >PROTEIN (ALPHA-BETA T CEL; SWP:NA; PDB:1BWMA AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIH 100001111111111000000000000100000001122100000 YSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYFCA 0011111111011111----------------------------- SGGQGRAEQFFGPGTRLTVLGSDYKDDDDKRSGGGGSGGGGSGGS --1------------------------------------------ GAQQQVRQSPQSLTVWEGETTILNCSYEDSTFDYFPWYRQFPGKS --------------------------------------------- PALLIAISLVSNKKEDGRFTIFFNKREKKLSLHITDSQPGDSATY ---------------------------9----------------- FCAATGSFNKLTFGAGTRLAVSPY ------------------------ >PARATHYROID HORMONE; SWP:NA; PDB:1BWX_ SVSEIQLMHNLGKHLNSMERVEWLRKKLQDVHNFVALGA 766533323334565444333321211222334456899 >PROTEIN (HEART FATTY ACID; SWP:NA; PDB:1BWYA VDAFVGTWKLVDSKNFDDYMKSLGVGFATRQVGNMTKPTTIIEVN 011000000000100000001111112221112211100000000 GDTVIIKTQSTFKNTEISFKLGVEFDETTADDRKVKSIVTLDGGK 110000011122110000000000000111221000000001110 LVHVQKWNGQETSLVREMVDGKLILTLTHGTAVCTRTYEKQA 000000001000000000000000000001100000000011 >PROTEIN (OSMOLARITY SENSO; SWP:NA; PDB:1BXDA TGQEMPMEMADLNAVLGEVIAAESGYEREIETALYPGSIEVKMHP 987431000000000000000011111100000000000000000 LSIKRAVANMVVNAARYGNGWIKVSSGTEPNRAWFQVEDDGPGIA 000000000000000111110000000001000000000111111 PEQRKHLFQPFVRGDSARTISGTGLGLAIVQRIVDNHNGMLELGT 221122123567899999999997643210000000000000001 SERGGLSIRAWLPVPVTRAQGTTKEG 23321000000001124579999999 >PROTEIN (PIX); SWP:NA; PDB:1BY1A MKGFDTTAINKSYYNVVLQNILETENEYSKELQTVLSTYLRPLQT 443234444321100000000000000000000000000001112 SEKLSSANISYLMGNLEEICSFQQMLVQSLEECTKLPEAQQRVGG 122111100000000000000000000000000011112110000 CFLNLMPQMKTLYLTYCANHPSAVNVLTEHSEELGEFMETKGASS 000000000000000000000000000000000001111122111 PGILVLTTGLSKPFMRLDKYPTLLKELERHMEDYHTDRQDIQKSM 110000110011110000000000000011223332111100000 AAFKNLSAQCQEVRKRKELELQILTEAIR 00000000001113434577777678999 >PROTEIN (SODIUM CHANNEL A; SWP:NA; PDB:1BYYA DNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPAN ------------522100000000000001345------------ KFQGMVFD -------- >PARATHYROID HORMONE-RELAT; SWP:NA; PDB:1BZG_ AVSEHQLLHDKGKSIQDLRRRFFLHHLIAEIHTA 9865432333454434321231123223579999 >ANTIMICROBIAL PEPTIDE 1; SWP:NA; PDB:1C01A SAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYN 000000000001000000000000000000000000010000000 QAGCSGVAHTRFGSSARACNPFGWKSIFIQC 0000000000000000000000000000001 >PROTEIN (EPIDERMAL GROWTH; SWP:NA; PDB:1C07A TWVVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTL 101000000000000000000000000000000000000000000 LAHIWSLCDTKDCGKLSKDQFALAFHLISQKLIKGIDPPHVLTPE 000000000000000000000000000000000000000000000 MIPPS 00013 >PROTEIN (1D8 UBIQUITIN); SWP:NA; PDB:1C3TA MQLFVKTLTGKTLTVELEPSDTVENLKAKIQDKEGIPPDQQRLIF 000000000000000000000000000000000000000000000 AGKQLEDGRTLSDYNLQKESTIHLVLRLRGG 0000000000000000000000000012357 >THP12 CARRIER PROTEIN; SWP:NA; PDB:1C3YA ETPREKLKQHSDACKAESGVSEESLNKVRNREEVDDPKLKEHAFC 999987653211000000011100000011111110000000000 ILKRAGFIDASGEFQLDHIKTKFKENSEHPEKVDDLVAKCAVKKD 000000000000000000000000111211100000000000000 TPQHSSADFFKCVHDNRS 000000000100001135 >TOXIN K-BETA; SWP:NA; PDB:1C49A TISCTNEKQCYPHCKKETGYPNAKCMNRKCKCFGR 10000000000000000000000000000000112 >PROTEIN (GURMARIN); SWP:NA; PDB:1C4EA QCVKKDELCIPYYLDCCEPLECKKVNWWDHKCIG 0000000000000000000000000000000001 >BUTANTOXIN; SWP:NA; PDB:1C55A WCSTCLDLACGASRECYDPCFKAFGRAHGKCMNNKCRCYT 2110000000000000000000000000000000000001 >CYTOCHROME C6; SWP:NA; PDB:1C6S_ ADLANGAKVFSGNCAACHMGGGNVVMANKTLKKEALEQFGMYSED 200000000000000000000000011000001101111111000 AIIYQVQHGKNAMPAFAGRLTDEQIQDVAAYVLDQAAKGWAG 000000000000000100001000000000000000001013 >MAUROCALCIN; SWP:NA; PDB:1C6WA GDCLPHLKLCKENKDCCSKKCKRRGTNIEKRCR 210000000000000000000000111000000 >CALCIUM VECTOR PROTEIN; SWP:NA; PDB:1C7VA WVRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDA ------211000000000011100000000000122344332111 EVEEAMKEADEDGNGVIDIPEFMDLIKKSKNALKES 00000000001121000000000000125------- >CYTOKINE RECEPTOR COMMON; SWP:NA; PDB:1C8PA MIQMAPPSLNVTKDGDSYSLRWETMKMRYEHIDHTFEIQYRKDTA 311100000000011100000000121111210000000000000 TWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTGYNGIWS 000000000000000000000000000000000001122111100 EWSEARSWDTES 100000000001 >CASPASE-ACTIVATED DNASE; SWP:NA; PDB:1C9FA VPHMCAVLRQPKCVKLRALHSACKFGVAARSCQELLRKGCVRFQL ---753111000000000000000000000000000000000000 PMPGSRLCLYEDGTEVTDDCFPGLPNDAELLLLTAGETWHGYVSD 011100000000000000000000000000000000000000124 >CALBINDIN D9K; SWP:NA; PDB:1CB1_ SAQKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKG 653211000000000000012000000000000000011122233 PRTLDDLFQELDKNGDGEVSFEEFQVLVKKISQ 321010000101113321000000000001134 >PROTEIN (CYTOTOXIN 2); SWP:NA; PDB:1CB9A LKCKKLVPLFSKTCPAGKNLCYKMFMVAAPHVPVKRGCIDVCPKS 000000000000000000000000000000000000000000000 SLLVKYVCCNTDKCN 000000000000000 >CYTOCHROME C551; SWP:NA; PDB:1CCH_ QDGEALFKSKPCAACHSVDTKMVGPALKEVAAKNAGVEGAADTLA 000000000000000000000000000000000000000000000 LHIKNGSQGVWGPIPMPPNPVTEEEAKILAEWVLSLK 0000000000000000000000000000000000000 >CHYMOTRYPSIN INHIBITOR; SWP:NA; PDB:1CCVA EECGPNEVFNTCGSACAPTCAQPKTRICTMQCRIGCQCQEGFLRN 310000000000000000000000000000000000000000000 GEGACVLPENC 00000000000 >CD59; SWP:NA; PDB:1CDQ_ LQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQVYNKCWKFEHC 000000000011000000111000000000010000000000000 NFNDVTTRLRENELTYYCCKKDLCNFNEQLEN 00000000000000000000000001001123 >PROTEIN (V3 LOOP OF HIV-1; SWP:NA; PDB:1CE4A CTRPNNNTRKSIHIGPGRAFYTTGEIIGDIRQAHC 45666776543323332221100000000000011 >PROTEIN (MEROZOITE SURFAC; SWP:NA; PDB:1CEJA NISQHQCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENP 543211112110000000011111110000000000000000001 NPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSYPLFDGI 100111111101000000012344421100000111211000000 FCSSSN 012358 >PATHOGENESIS-RELATED PROT; SWP:NA; PDB:1CFE_ QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCN 110000000000000000000000000000000000000011111 LIHSGAGENLAKGGGDFTGRAAVQLWVSERPSYNYATNQCVGGKK 111221000000011100000000000000100011111111211 CRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY 100000000000000000000012300000000000000111000 >PROTEIN (CALCIUM PUMP); SWP:NA; PDB:1CFFB LRRGQILWFRGLNRIQTQIK 98642100000000000014 >COAGULATION FACTOR VIII; SWP:NA; PDB:1CFG_ TRYLRIHPQSWVHQIALRMEVL 4211110000000000000013 >PROTEIN (NON HISTONE PROT; SWP:NA; PDB:1CG7A MVTPREPKKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPD 999999999999865432221221000000000000000111111 ITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRYESEKELYNA 111100000000000000000000000000000000000000000 TLA 112 >EQUINE HERPES VIRUS-1 RIN; SWP:NA; PDB:1CHC_ MATVAERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPL 000000000000000000000000000000000000000000000 CKVPVESVVHTIESDSEFGDQLI 00000000000000000000000 >CHLOROTOXIN; SWP:NA; PDB:1CHL_ MCMPCFTTDHQMARKCDDCCGGKGRGKCYGPQCLCR 110012332210000000000010000001000001 >PROTEIN (LYMPHOCYTE FUNCT; SWP:NA; PDB:1CI5A SSQQIYGVKYGNVTFHVPSNQPLKEVLWKKQKDKVAELENSEFRA 200000000000000000000000000000000000000000000 FSSFKNRVYLDTKSGSLTIYNLTSSDEDEYEMESPNITDSMKFFL 010000000000000000000000000000000000000000000 YVGES 00000 >PROTEIN (TACHYSTATIN A); SWP:NA; PDB:1CIXA YSRCQLQGFNCVVRSYGLPTIPCCRGLTCRSYFPGSTYGRCQRY 43111000000001233221110000000000121100000001 >PROTEIN (RAT CA2+/CALMODU; SWP:NA; PDB:1CKKB VKLIPSWTTVILVKSMLRKRSFGNPF 75532100000000000112467878 >PROTEIN (PROTEIN B); SWP:NA; PDB:1CKV_ MSVNSNAYDAGIMGLKGKDFADQFFADENQVVHESDTVVLVLKKS 999999999999999999999999999997542210000000000 DEINTFIEEILLTDYKKNVNPTVNVEDRAGYWWIKANGKIEVDCD 000000000000000000000000000001000000000000000 EISELLGRQFNVYDFLVDVSSTIGRAYTLGNKFTITSELMGLDRK 000000000011000000000000000000000000001344678 LEDYHA 799999 >PROTEIN (CYSTIC FIBROSIS; SWP:NA; PDB:1CKWA MPGTIKENIIGVSYDEYRYRSVIKA 5421100000000000000001124 >PROTEIN (CYSTIC FIBROSIS; SWP:NA; PDB:1CKXA MPGTIKENIIFGVSYDEYRYRSVIKA 43211000000010000000111224 >POLYOMAVIRUS ENHANCER BIN; SWP:NA; PDB:1CL3A VVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQTRFQNAC 432111000000000000000000000000000000000000000 RDGRSEIAFVATGTNLSLQFFPASWQGEQRQTPSREYVDLEREAG 000000000000000000000000121111100000000000000 KVYLKAPMILNGVCVIWKGWIDLHRLDGMGCLEFDEERAQQEDAL 000000000000000000000000000000000000000000000 AQQ 012 >FERREDOXIN; SWP:NA; PDB:1CLF_ AYKIADSCVSCGACASECPVNAISQGDSIFVIDADTCIDCGNCAN 100000010001110000000000000000000000011111000 VCPVGAPVQE 0011000011 >CHARYBDOTOXIN, ALPHA CHIM; SWP:NA; PDB:1CMR_ CTTSKECWSVCQRLHNTSKGWCDHRGCICES 1110000100011111100000000000001 >PROTEIN (GAIP (G-ALPHA IN; SWP:NA; PDB:1CMZA SPGISGGGGGIPSPEEVQSWAQSFDKLMHSPAGRSVFRAFLRTEY -----------0000000000000000000000000000000000 SEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSL 000000000000000011000000000000000000111110000 DSRVREGINKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTY 100000000000000000000000000000000000000000000 RALLPWVDSSSSLIHRD 0000------------- >TOXIN 2; SWP:NA; PDB:1CN2_ KEGYLVDKNTGCKYECLKLGDNDYCLRECKQQYGKGAGGYCYAFA 100000122211111110000000000000000111000000000 CWCTHLYEQAIVWPLPNKRCS 000000001100011222223 >PROTEIN (ACTIVATOR OF MET; SWP:NA; PDB:1CO4A MVVINGVKYACDSCIKSHKAAQCEHNDRPLKILKPRGRPPTT 000000000000000010000001001000000123578999 >PROTEIN (NEMATODE ANTICOA; SWP:NA; PDB:1COUA KATMQCGENEKYDSCGSKECDKKCKYDGVEEEDDEEPNVPCLVRV 855332321000111122221111224555667665545544333 CHQDCVCEEGFYRNKDDKCVSAEDCELDNMDFIYPGTRNP 3210000011001111100000000011234445789999 >PROTEIN (COPZ); SWP:NA; PDB:1CPZA AQEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFD 100000000011000000000000000000000001000000000 EANVQATEICQAINELGYQAEVI 00000000000000000000000 >PROTEIN (NEW HYPOTHALAMIC; SWP:NA; PDB:1CQ0A FSGPPGLQGRLQRLLQASGNHAAGILTM 0000000000000000000000000000 >PROTEIN (LOW DENSITY LIPO; SWP:NA; PDB:1CR8A PGGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCEGV 310000000000000000000000000000000000011246 >CARDIOTOXIN II; SWP:P01442; PDB:1CRE LKCNKLVPLFYKTCPAGKNLCYKMFMVSNLTVPVKRGCIDVCPKN 000000000000000000000000000000000000000000000 SALVKYVCCNTDRCN 000000000000000 >TYPE IIA BACTERIOCIN CARN; SWP:NA; PDB:1CW5A VNYGNGVSCSKTKCSVNWGQAFQERYTAGINSFVSGVASGAGSIG 999999999999975321000000000000000000000125789 RRP 999 >TYPE IIA BACTERIOCIN LEUC; SWP:NA; PDB:1CW6A KYYGNGVHCTKSGCSVNWGEAFSAGVHRLANGGNGFW 0111000000110000000000000000000257899 >ENDOGLUCANASE C; SWP:NA; PDB:1CX1A ASLDSEVELLPHTSFAESLGPWSLYGTSEPVFADGRMCVDLPGGQ 642211000010000000000000000000000100000001111 GNPWDAGLVYNGVPVGEGESYVLSFTASATPDMPVRVLVGEGGGA 110110000000000000000000000000000000000001122 YRTAFEQGSAPLTGEPATREYAFTSNLTFPPDGDAPGQVAFHLGK 110000000000000000000000001000111111000000000 AGAYEFCISQVSLTTSAT 110000000000001136 >VCP-LIKE ATPASE; SWP:NA; PDB:1CZ4A MESNNGIILRVAEANSTDPGMSRVRLDESSRRLLDAEIGDVVEIE 000000000000000000000000000000000000000000000 KVRKTVGRVYRARPEDENKGIVRIDSVMRNNCGASIGDKVKVRKV 000000000000000000000000000000000000000000000 RTEIAKKVTLAPIIRKDQRLKFGEGIEEYVQRALIRRPMLEQDNI 000000000000000000000000000000000000000000000 SVPGLTLAGQTGLLFKVVKTLPSKVPVEIGEETKIEIREEPASEV 000000000000000000000000000000000000000000000 LEEGG 00000 >PROTEIN (ANDROCTONIN); SWP:NA; PDB:1CZ6A RSVCRQIKICRRRGGCYYKCTNRPY 4310000000012200000000234 >GLUCAGON-LIKE PEPTIDE-1-(; SWP:NA; PDB:1D0RA HAEGTFTSDVSSYLEGQAAKEFIAWLVKGR 666554321211111221221121233455 >HANATOXIN TYPE 1; SWP:NA; PDB:1D1HA ECRYLFGGCKTTSDCCKHLGCKFRDKYCAWDFTFS 10000000000000000000001210000013578 >INITIATION FACTOR 2; SWP:NA; PDB:1D1NA YEEKVIGQAEVRQTFKVSKVGTIAGCYVTDGKITRDSKVRLIRQG 321000000000000000000000000000000000000000000 IVVYEGEIDSLKRYKDDVREVAQGYECGLTIKNFNDIKEGDVIEA 000000000000001000000000000000000000000000000 YVMQEVARA 001110112 >HYPOTHETICAL 11.4 KD PROT; SWP:NA; PDB:1D1RA MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKGK ---------------------------421000000000123421 GVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRD 000000000010000000000000112111001110000000000 LLKSLLEAKGMKVKLAGGLEHHHHHH 00000000000000112235------ >TRNA SYNTHETASE; SWP:NA; PDB:1D2DA MVYDKIAAQGEVVRKLKAEKAPKAKVTEAVECLLSLKAEYKEKTG 200000000000000000000000000000000000000000000 KEYVPGLEHHHHHH 00000000023--- >LOW-DENSITY LIPOPROTEIN R; SWP:NA; PDB:1D2JA VATCRPDEFQCSDGNCIHGSRQCDREYDCKDLSDEVGCVN 1000000000000100000000000000000000001123 >LIPOPROTEIN RECEPTOR RELA; SWP:NA; PDB:1D2LA GSPPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPALCHQH 421110000000000000000000000000000000000000013 >HUMAN CELL DEATH-INDUCING; SWP:NA; PDB:1D4BA MEYLSALNPSDLLRSVSNISSEFGRRVWTSAPPPQRPFRVCDHKR 999999999999999999999999999765322000000000000 TIRKGLTAATRQELLAKALETLLLNGVLTLVLEEDGTAVDSEDFF 000000000000000000000000000000000000000000000 QLLEDDTCLMVLQSGQSWSPTRSGVLHHHHHH 00000000000000110112356899999999 >HUMAN PHOSPHATASE HPTP1E; SWP:NA; PDB:1D5GA PKPGDIFEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGA -------5-6----------------------------------- AESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLE --------------------------------------------- KGQSPT ------ >S12 TRANSCRIPTION FACTOR; SWP:NA; PDB:1D5VA MLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENK 211000000000000000000000000000000000000000000 QGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFEN 000000000000000000000112222211000001244677999 GSFL 9999 >DEFENSIN-LIKE PEPTIDE-2; SWP:NA; PDB:1D6BA IMFFEMQACWSHSGVCRDKSERNCKPMAWTYCENRNQKCCEY 653210000000000000000000000000000000000000 >RIBONUCLEASE P; SWP:NA; PDB:1D6TA MLLEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHFRL 543222111111000000000000000000000012222111000 GISVSKKLGNAVLRNKIKRAIRENFKVHKSHILAKDIIVIARQPA 100001111100000000000000000000000000000000000 KDMTTLQIQNSLEHVLKIAKVFNKKIK 010000000000000000000011223 >SGS1 RECQ HELICASE; SWP:NA; PDB:1D8BA ELNNLRMTYERLRELSLNLGNRMVPPVGNFMPDSILKKMAAILPM 321000000000000000000001111100000000000000000 NDSAFATLGTVEDKYRRRFKYFKATIADLSKKRSSE 000000001100000000000000000000001124 >GENERAL TRANSCRIPTION FAC; SWP:NA; PDB:1D8JA ALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLD 999753110000000000000000000000000000000000001 IGLKQKQWLMTEALVNNPKIEVIDGKYAFKPKYNVR 000000000000000000000010000000024579 >CECROPIN A(1-8)-MAGAININ; SWP:NA; PDB:1D9MA KWKLFKKIPKFLHSAKKF 999666431000000011 >METHYL-CPG-BINDING PROTEI; SWP:NA; PDB:1D9NA MAEDWLDCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRS 531000000000000000001234555421000000000000000 KVELTRYLGPACDLTLFDFKQGILCYPAPK 000000000000000000000000012357 >CYCLIN-DEPENDENT KINASE 4; SWP:NA; PDB:1D9SA GSPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFG 999999975321100000000000000000000000000001100 RRPIQVMMMGSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGF 000000000000000000000000000000000000000000000 LDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 000000000000000000111100000000000000000000001 D 3 >CHLOROPLAST THIOREDOXIN M; SWP:NA; PDB:1DBYA MEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIA 310000000000000000000000000000000000000000000 GEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETII 000111010000000000000000001000000001110000001 GAVPKATIVQTVEKYLN 11001000000000113 >YHHP PROTEIN; SWP:NA; PDB:1DCJA MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADD 310000000000000000000000000000000000000000000 PATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG 000000000000000000000000000000000002 >PROTEIN (BID); SWP:NA; PDB:1DDBA MDSEVSNGSGLGAKHITDLLVFGFLQSSGCTRQELEVLGRELPVQ 999999999986310000000000000111110000000135899 AYWEADLEDELQTDGSQASRSFNQGRIEPDSESQEEIIHNIARHL 999999999999999999999999999999999641000000000 AQIGDEMDHNIQPTLVRQLAAQFMNGSLSEEDKRNCLAKALDEVK 000000001110110000000000123334321000000000001 TAFPRDMENDKAMLIMTMLLAKKVASHAPSLLRDVFHTTVNFINQ 000011110000000000000000111111100000000000001 NLFSYVRNLVRNEMD 111112222134457 >RIBONUCLEASE ALPHA-SARCIN; SWP:NA; PDB:1DE3A AVTWTCLNDQKNPKTNKYETKRLLYNQNKAESNSHHAPLSDGKTG 100000000000000000000000000000000000000000000 SSYPHWFTNGYDGDGKLPKGRTPIKFGKSDCDRPPKHSKDGNGKT 000000000001111111211000000000000000000001111 DHYLLEFPTFPDGHDYKFDSKKPKENPGPARVIYTYPNKVFCGII 000000000000000000000000000000000000000000000 AHTKENQGELKLCSH 000000000000000 >DECORSIN; SWP:NA; PDB:1DEC_ APRLPQCQGDDQEKCLCNKDECPPGQCRFPRGDADPYCE 210000000000000000000000000000000000000 >DENDROTOXIN I; SWP:NA; PDB:1DEM_ QPLRKLCILHRNPGRCYQKIPAFYYNQKKKQCEGFTWSGCGGNSN 000000000000000000000000000000000000000000000 RFKTIEECRRTCIRK 000000000000000 >METALLOTHIONEIN-1; SWP:NA; PDB:1DFSA KSCCSCCPVGCSKCAQGCVCKGAADKCTCCA 0000000000000000000000000000000 >METALLOTHIONEIN-1; SWP:NA; PDB:1DFTA MDPNCSCSTGGSCTCTSSCACKNCKCTSCK 000000000000000000000000000000 >LUNG SURFACTANT PROTEIN B; SWP:NA; PDB:1DFWA FPIPLPYCWLCRALIKRIQAMIPKG 6432100000000000000000001 >ICEBERG (PROTEASE INHIBIT; SWP:NA; PDB:1DGNA ADQLLRKKRRIFIHSVGAGTINALLDCLLEDEVISQEDMNKVRDE 000000000000000000000000000000000000000000000 NDTVMDKARVLIDLVTGKGPKSCCKFIKHLCEEDPQLASKMGLH 00000000000000000000000000000000000000000001 >DELTA-SLEEP-INDUCING PEPT; SWP:NA; PDB:1DIPA MDLVKNHLMYAVREEVEILKEQIRELVEKNSQLERENTLLKTLAS 999999978865542000000000000000000000000000001 PEQLEKFQSRLSPEEPAPETPEAPEAPGGSAV 24799999999999999999999999999999 >ANTIFUNGAL PEPTIDE; SWP:NA; PDB:1DKCA AGCIKNGGRCNASAGPPYCCSSYCFQIAGQSYGVCKNR 11000000000122122100000000001100000001 >J-ATRACOTOXIN-HV1C; SWP:NA; PDB:1DL0A AICTGADRPCAACCPCCPGTSCKAESNGVSYCRKDEP 0000000000000000000000000000000000124 >CD6 METALLOTHIONEIN-1; SWP:NA; PDB:1DMC_ SPCQKCTSGCKCATKEECSKTCTKPCSCCPK 0000000000000000000000000000000 >CD6 METALLOTHIONEIN-1; SWP:NA; PDB:1DME_ PGPCCNDKCVCQEGGCKAGCQCTSCRCS 0000000000000000000000000000 >NON-RIBOSOMAL PEPTIDE SYN; SWP:NA; PDB:1DNYA MPVTEAQYVAPTNAVESKLAEIWERVLGVSGIGILDNFFQIGGHS -------23111000000000000000000000000000111210 LKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATRSHHHHH 00000000000000000000000000000000000000------- H - >CYTOCHROME B5; SWP:NA; PDB:1DO9A DKDVKYYTLEEIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEV 653110000000001011000000000000000000000000000 LREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDDRSKLSKP 000000000000000000000000000000000001112245799 METL 9999 >TRAM PROTEIN; SWP:NA; PDB:1DP3A AKVQAYVSDEIVYKINKIVERRRAEGAKSTDVSFSSISTMLLELG 998655431100100000000000112223210000000000000 LRVYEAQMER 0111112347 >INTEGRIN ALPHA-IIB SUBUNI; SWP:NA; PDB:1DPKA KVGFFKRNRPPLEEDDEEGE 00000000000000000012 >INTEGRIN ALPHA-IIB SUBUNI; SWP:NA; PDB:1DPQA KVGFFKRNRAALEEDDEEGE 00000000000000122456 >TACHYCITIN; SWP:NA; PDB:1DQCA YLAFRCGRYSPCLDDGPNVNLYSCCSFYNCHKCLARLENCPKGLH 753211101101111000000000000000010000000111100 YNAYLKVCDWPSKAGCTSVNKECHLWKT 0001000000010011111111222346 >BETA-SPECTRIN; SWP:NA; PDB:1DRO_ GSGTGAGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRIS 987654321000000001112444555542100000000010000 FYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKKHVLRVK 000000000000100010000000000000011211100000000 LANGALFLLQAHDDTEMSQWVTSLKAQSDSTA 00100000000000000000000000001356 >DENDROASPIN; SWP:NA; PDB:1DRS_ RICYNHLGTKPPTTETCQEDSCYKNIWTFDNIIRRGCGCFTPRGD 000000011111000000000000001111100000000123444 MPGPYCCESDKCNL 31100000000011 >VPR PROTEIN; SWP:NA; PDB:1DSK_ AIIRILQQLLFIHFRIGCRHSRIGVTRQ 0000000000000000000112346789 >NUCLEIC ACID BINDING PROT; SWP:NA; PDB:1DSVA PPGLCPRCKKGYHWKSECKSKFDKDGNPLPP 4210000000010111100000000000012 >ACETYL-DELTA-TOXIN; SWP:NA; PDB:1DTC_ MAQDIISTIGDLVKWIIDTVNKFTKK 31011100000000000000000024 >DENDROTOXIN K; SWP:NA; PDB:1DTK_ AAKYCKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRF 100000000000000000000000000000000000000000000 KTIEECRRTCVG 000000000001 >DNA POLYMERASE III; SWP:NA; PDB:1DU2A MLKNLAKLDQTEMDKVNVDLAAAGVAFKERYNMPVIAEAVEREQP 999975432100000000001111111111111111110000000 EHLRSWFRERLIAHRLASVNLSRLPYEPKLK 0000000001222333322234556899999 >HOMEOBOX PROTEIN PBX1; SWP:NA; PDB:1DU6A SSGHIEGRHMNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGI 999997542211000000000000000010000000000000000 TVSQVSNWFGNKRIRYKKN 0000000000001111246 >BMP02 NEUROTOXIN; SWP:NA; PDB:1DU9A VGCEECPMHCKGKNAKPTCDDGVCNCNV 2101000000121000000000000001 >MAGAININ 2; SWP:NA; PDB:1DUMA GIGKYLHSAKKFGKAWVGEIMNS 21000000000000000000001 >APO-D-ALANYL CARRIER PROT; SWP:NA; PDB:1DV5A ADEAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLL 310000000000000000000000000000000000000000000 LELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQAQ 00000000000001000000000000000000000 >CYTOCHROME C553; SWP:NA; PDB:1DVH_ ADGAALYKSCIGCHGADGSKAAMGSAKPVKGQGAEELYKKMKGYA 200000000000000010000000000000010000000000000 DGSYGGERKAMMTNAVKKYSDEELKALADYMSKL 0000111000000000000000000000000001 >CYTOCHROME C551; SWP:NA; PDB:1DVVA EDPEVLAKNKGCMACHAIDTKMVGPAYKDVAAKYAGQAGAEAYLA 100000000000000000000000000000000000000000000 QRIKNGSQGVWGPIPMPPNAVSDDEAQTLAKWILSQK 0000000000000000000000000000000000002 >LINUM USITATISSINUM TRYPS; SWP:NA; PDB:1DWMA SRRCPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTK 321000000000000000000000000000000000000000000 DFRCDRVWVIVNDHGVVTSVPHIT 000000000000000000000000 >RUBREDOXIN; SWP:NA; PDB:1DX8A MEIDEGKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPA 321110000000000000000000000000000000000000000 CRSPKNQFKSIKKVIAGFAENQKYG 0000000000001235679999999 >MODIFIER 1 PROTEIN; SWP:P83917; PDB:1DZ1A HMKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADL 975433211000000000000000001110000001011110000 VPAKEANVKCPQVVISFYEERLTWH 0000000000000000000000112 >CHORIONIC GONADOTROPIN; SWP:P01215; PDB:1DZ7A APDVQDCPECTLQENPFFSQPGAPILQCMGCCFSRAYPTPLRSKK 999976432112223443445443322112223579999999999 TMLVQKNVTSESTCCVAKSYNRVTVMGGFKVENHTACHCSTCYYH 999999997531000111122333344432222221100001356 KS 89 >CARCINOEMBRYONIC ANTIGEN; SWP:P06731; PDB:1E07A KLTIESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQI 000000000000000000000000000000000000000000000 IGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDTGFYTLHV 000000000000000000000000000000000000000000000 IKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAVAFTCEP 000000000000000000000000000000000000000000000 ETQDATYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYK 000000000000000000000000000000000000000000000 CETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSC 000000000000000000000000000000000000000000000 HAASNPPAQYSWFVNGTFQQSTQELFIPNITVNNSGSYTCQAHNS 000000000000000000000000000000000000000000000 DTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEI 000000000000000000000000000000000000000000000 QNTTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECG 000000000000000000000000000000000000000000000 IQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHA 000000000000000000000000000000000000000000000 ASNPPAQYSWLIDGNIQQHTQELFISNITEKNSGLYTCQANNSAS 000000000000000000000000000000000000000000000 GHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEAQN 000000000000000000000000000000000000000000000 TTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQ 000000000000000000000000000000000000000000000 NSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSAS 000000000000000000000000000000000000000000000 NPSPQYSWRINGIPQQHTQVLFIAKITPNNNGTYACFVSNLATGR 000000000000000000000000000000000000000000000 NNSIVKSITVSA 000000000000 >PRU AV 1; SWP:O24248; PDB:1E09A GVFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILE 000000000000000000000000000000000000000000000 GDGGPGTIKKITFGEGSQYGYVKHKIDSIDKENYSYSYTLIEGDA 000000000000012221000000000000000000000000000 LGDTLEKISYETKLVASPSGGSIIKSTSHYHTKGNVEIKEEHVKA 000000000000000000000000000000000110000000000 GKEKASNLFKLIETYLKGHPDAYN 000000000000000000000000 >SERINE/THREONINE-PROTEIN; SWP:P35465; PDB:1E0AB GSISLPSDFEHTIHVGFDAVTGEFTGMPEQWARLLQTSNITKSEQ 999999999889976422234221132222222245678999999 K 9 >HUMAN IMMUNODEFICIENCY VI; SWP:P04584; PDB:1E0EA FLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQ 000000000000000000000000000000000000000000000 KGEAIHGQVN 1--------- >MEMBRANE-BOUND LYTIC MURE; SWP:P0AEZ7; PDB:1E0GA DSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTL 000000000000000000000000000000000000000000000 FVK 001 >WWPROTOTYPE; SWP:NA; PDB:1E0MA SMGLPPGWDEYKTHNGKTYYYNHNTKTSTWTDPRMSS 4200000000000000000000000000000000023 >HYPOTHETICAL PROTEIN; SWP:P46995; PDB:1E0NA PGWEIIHENGRPLYYNAEQKTKLHYPP 000000000000000000000000124 >FERREDOXIN; SWP:NA; PDB:1E0ZA PTVEYLNYETLDDQGWDMDDDDLFEKAADAGLDGEDYGTMEVAEG 000000000000000001111000000000000000000000000 EYILEAAEAQGYDWPFSCRAGACANCASIVKEGEIDMDMQQILSD 000000000000000000000000000000000000001110000 EEVEEKDVRLTCIGSPAADEVKIVYNAKHLDYLQNRVI 00000000000000000000000000000001111224 >AFX; SWP:NA; PDB:1E17A GSSHHHHHHSSGLVPRGSHMLEDPGAVTGPRKGGSRRNAWGNQSY ----------------------------------75332221000 AELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWK 000000000000000000000000000000000001111110000 NSIRHNLSLHSKFIKVHNEATGKSSWWMLNPEGGKSGKAPRRRAA 0000000000000000001122100000001223----------- SMDSSSKLLRGRSKA --------------- >BETA-DEFENSIN 8; SWP:NA; PDB:1E4RA NEPVSCIRNGGICQYRCIGLRHKIGTCGSPFKCCK 54421001000000000111000000000000000 >BETA-DEFENSIN 1; SWP:NA; PDB:1E4SA DHYNCVSSGGQCLYSACPIFTKIQGTCYRGKAKCCK 211000000000000000000000000010100000 >BETA-DEFENSIN 7; SWP:NA; PDB:1E4TA NSKRACYREGGECLQRCIGLFHKIGTCNFRFKCCKFQ 6431000001000000011000000001110000012 >TRANSCRIPTIONAL REPRESSOR; SWP:NA; PDB:1E4UA MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRI 999998664211001001111111001000011100000000000 RTDENGLCPACRKPYPEDPAVYKPLSQEELQRI 000010001111000113567899999999999 >EXCINUCLEASE ABC SUBUNIT; SWP:NA; PDB:1E52A MHHHHHHLEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEA -------99987764321100000000000000000000011000 AQIRDQLHQLRELFIAAS 000000000000000101 >FIBRONECTIN; SWP:P02751; PDB:1E88A YGHCVTDSGVVYSVGMQWLKTQGNKQMLCTCLGNGVSCQETAVTQ 542222333221122111223334433222233432233454556 TYGGNSNGEPCVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQ 566545665433343345655332234445776542113344344 DQKYSFCTDHTVLVQTRGGNSNGALCHFPFLYNNHNYTDCTSEGR 322234456644322222321111122332222222233334444 RDNMKWCGTTQNYDADQKFGFCPMA 5554322111221222211223456 >ILEAL LIPID BINDING PROTE; SWP:P10289; PDB:1EAL_ AFTGKYEIESEKNYDEFMKRLALPSDAIDKARNLKIISEVKQDGQ 100000000111000000000111111111111110000000110 NFTWSQQYPGGHSITNTFTIGKECDIETIGGKKFKATVQMEGGKV 000000001121110000000110001111111100000001100 VVNSPNYHHTAEIVDGKLVEVSTVGGVSYERVSKKLA 0001110000000011000000001100000000012 >ECTATOMIN; SWP:P49343; PDB:1ECIA GVIPKKIWETVCPTVEPWAKKCSGDIATYIKRECGKL ---------2-211----1122-2-232-21--1-3- >ECTATOMIN; SWP:P49344; PDB:1ECIB WSTIVKLTICPTLKSMAKKCEGSIATMIKKKCDK 3332112122112211113332023212123124 >CHITINASE A1; SWP:P20533; PDB:1ED7A AWQVNTAYTAGQLVTYNGKTYKCLQPHTSLAGWEPSNVPALWQLQ 000000000000000010000000000000000000000000000 >DNA-DIRECTED RNA POLYMERA; SWP:O26147; PDB:1EF4A MIPVRCLSCGKPVSAYFNEYQRRVADGEDPKDVLDDLGLKRYCCR 101100000000000000000000000000000000000100000 RMLISHVETW 0000000123 >MINI-PROINSULIN; SWP:P01308; PDB:1EFEA FVNQHLCGSHLVEALYLVCGERGFFYTPKTRRYPGDVKRGIVEQC 211000000000000000011222222223343433211110000 CTSICSLYQLENYCN 000000000000001 >GLUTAREDOXIN; SWP:P68688; PDB:1EGO_ MQTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITK 100000011211100000000000011111000000000000011 EDLQQKAGKPVETVPQIFVDQQHIGGYTDFAAWVKENLDA 1100101122221110000110000000000000000013 >VASODILATOR-STIMULATED PH; SWP:P50552; PDB:1EGXA MSETVICSSRATVMLYDDGNKRWLPAGTGPQAFSRVQIYHNPTAN 210000000000000000000000000000100000000000000 SFRVVGRKMQPDQQVVINCAIVRGVKYNQATPNFHQWRDARQVWG 000000000000000000000000000000000000000000000 LNFGSKEDAAQFAAGMASALEALEG 0000000000000000000000001 >EPS15; SWP:P42566; PDB:1EH2_ PWAVKPEDKAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDIL 100000000000000000000000000000000000000000000 GRVWELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMSLPPALV 000000000000000000000000000000000000000000000 PPSKR 01112 >SCAFFOLDIN PROTEIN; SWP:Q45996; PDB:1EHXA MQDPTINPTSISAKAGSFADTKITLTPNGNTFNGISELQSSQYTK 110000000000000000000000000000000000000000000 GTNEVTLLASYLNTLPENTTKTLTFDFGVGTKNPKLTITVLPKDI 000000000000000000000000000000110000000001135 PGLE 7899 >HYPOTHETICAL PROTEIN MTH1; SWP:O27652; PDB:1EIJA MRQQLEMQKKQIMMQILTPEARSRLANLRLTRPDFVEQIELQLIQ 999754210000000000000000000000000000000000000 LAQMGRVRSKITDEQLKELLKRVAGKKREIKISRK 000121100000000000000000135-------- >RNA POLYMERASE SUBUNIT RP; SWP:O27122; PDB:1EIKA MKREILKHQLVPEHVILNESEAKRVLKELDAHPEQLPKIKTTDPV 999999763100000000000000000000000000000000000 AKAIGAKRGDIVKIIRKSPTAEEFVTYRLVQD 00000000000000000001000000000000 >MU-AGATOXIN-I; SWP:P11057; PDB:1EIT_ ECVPENGHCRDWYDECCEGFYCSCRQPPKCICRNNN 210000000133211001000000000000000001 >HYPOTHETICAL PROTEIN MTH5; SWP:NA; PDB:1EIWA VTAEIRLYITEGEVEDYRVFLERLEQSGLEWRPATPEDADAVIVL 431100000000100000000000001111000001100000000 AGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENVPPELEAVSS 000010000000000000011100000000011111000000000 EVVGWNPHCIRDALEDALDVI 000000000000000001135 >WISKOTT-ALDRICH SYNDROME; SWP:NA; PDB:1EJ5A SGFKHVSHVGWDPQNGFDVNNLDPDLRSLFSRAGISEAQLTDAET 986442110000000000000000000000000000000000000 SKLIYDFIEDQGGLEAVRQEMRRQGGSGGSQSSEGLVGALMHVMQ 000000000000000000000000135653210000000000000 KRSRAIHSSDEGEDQAG 00011234689999999 >I-309; SWP:NA; PDB:1EL0A SKSMQVPFSRCCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLK 999998753200000001100000000000001111100000000 RGKEACALDTVGWVQRHRKMLRHCPSKRK 00000000000000000000000012357 >TRANSCRIPTION ELONGATION; SWP:NA; PDB:1ENWA GSHMPRNSKNDGVDTAIYHHKLRDQVLKALYDVLAKESEHPPQSI 999999997766554555554333212211122233444554432 LHTAKAIESEMNKVNNCDTNEAAYKARYRIIYSNVISKNNPDLKH 343233323333444445544443333223323434555555455 KIANGDITPEFLATCDAKDLAPAP 455455456777999999999999 >TRANSCRIPTION ELONGATION; SWP:NA; PDB:1EO0A MDSKEVLVHVKNLEKNKSNDAAVLEILHVLDKEFVPTEKLLRETK 000000000000000000000000000000000000000000000 VGVEVNKFKKSTNVEISKLVKKMISSWKDAIN 00000000000000000000000000000000 >HYPOTHETICAL PROTEIN MTH1; SWP:NA; PDB:1EO1A MKIAIASSGTDLGSEVSRFFGRAPYFMIVEMKKGNIESSEVIENP 000000121111111111111100000000011100000000012 SASASGGAGIRTAQIIANNGVKAVIASSPGPNAFEVLNELGIKIY 223333210000000000000000000000000000000000000 RATGTSVEENLKLFTEGNLEEIRSPGSGRGRRRR 0011100000000000001010124678999999 >APOLIPOPHORIN-III; SWP:NA; PDB:1EQ1A DAPAGGNAFEEMEKHAKEFQKTFSEQFNSLVNSKNTQDFNKALKD 987654311000000000000000000000111111110000000 GSDSVLQQLSAFSSSLQGAISDANGKAKEALEQARQNVEKTAEEL 000000000000000000000101100000000000000000000 RKAHPDVEKEANAFKDKLQAAVQTTVQESQKLAKEVASNMEETNK 000000000000000000000000000000000000011221110 KLAPKIKQAYDDFVKHAEEVQKKLHEAATKQ 0000000000000000000000000000012 >ORYZACYSTATIN-I; SWP:NA; PDB:1EQKA MSSDGGPVLGGVEPVGNENDLHLVDLARFAVTEHNKKANSLLEFE 999999986420000100000000000000000000000000000 KLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKEL 000000000000000000000000000000000000000000000 QEFKPVDASANA 000000123568 >PHEROMONE ER-2; SWP:NA; PDB:1ERD_ DPMTCEQAMASCEHTMCGYCQGPLYMTCIGITTDPECGLP 3100000000000000000000000000000000000112 >TRANSMEMBRANE GLYCOPROTEI; SWP:NA; PDB:1ERFA AVGIGALFLGFLGAAGSTMGARS 21000000000000112223445 >PHEROMONE ER-10; SWP:NA; PDB:1ERP_ DLCEQSALQCNEQGCHNFCSPEDKPGCLGMVWNPELCP 00000000000000000000000000000000000001 >PHEROMONE ER-11; SWP:NA; PDB:1ERY_ DECANAAAQCSITLCNLYCGPLIEICELTVMQNCEPPFS 000000000000000000000000000000000000001 >MINE; SWP:NA; PDB:1EV0A RSDAEPHYLPQLRKDILEVICKYVQIDPEMVTVQLEQKDGDISIL 000000000000000000000000000000000000000000000 ELNVTLPEAEELK 0000000011247 >RK-1 DEFENSIN; SWP:P81655; PDB:1EWSA MPCSCKKYCDPWEVIDGSCGLFNSKYICCREK 31000000000000000000000000000013 >TRANSCRIPTION FACTOR 1; SWP:P04445; PDB:1EXEA MNKTELIKAIAQDTGLTQVSVSKMLASFEKIITETVAKGDKVQLT 000000000000000000000000000000000000000000001 GFLNIKPVARQARKGFNPQTQEALEIAPSVGVSVKPGESLKKAAE 000000011223467899999987543211111111102000000 GLKYEDFAK 000001111 >DNAJ PROTEIN; SWP:P08622; PDB:1EXKA GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQG 999998753211001101000001111000000000100000112 FFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERS 1110111111111100000000111101011123 >ANTITERMINATION FACTOR NU; SWP:P0A780; PDB:1EY1A MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDV 766533200000000000000000000000000001111231110 LYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALY 000000000000000000000000110001111000000000000 ELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAAPVIR 000001111000000000000000001110000000000000001 PNKK 1122 >CHOLESTERYL ESTER TRANSFE; SWP:P34929; PDB:1EZEA APDVSSALDKLKEFGNTLEDKAWEVINRIKQSEFPAKT 64333110000000000000000000000001113456 >DIADENOSINE 5',5'''-P1,P4; SWP:O04841; PDB:1F3YA GPLGSMDSPPEGYRRNVGICLMNNDKKIFAASRLDIPDAWQMPQG 421110000111110000000000000000000000000000000 GIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFPPKVRE 000000000000000000000000000000000000001122111 KLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWS 211122222110000000000000000001012322110000000 WVTPEQLIDLTVEFKKPVYKEVLSVFAPHL 000000000000000000000000000000 >YEAST KILLER TOXIN-LIKE P; SWP:NA; PDB:1F53A IDHVPCRGGENFLKIWSHSGGQQSVDCYANRGRIDFGGWWVDKIS 000000000000000000000000000000000000000000000 TGNNDLIYYDANGDSVRVDRWHDITYPNRPPKVNSIEIL 000000000000000000000000000000000000000 >CALMODULIN; SWP:P06787; PDB:1F54A SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSE 421000000000000000000000000000000000000000000 AEVNDLMNEIDVDGNHQIEFSEFLALMSRQLK 00000000000010100000000000000113 >RHO-GEF VAV; SWP:P27870; PDB:1F5XA MKGDEIYEDLMRLESVPTPPKMTEYDKRCCCLREIQQTEEKYTDT 310000000112222234444423211110000000000000000 LGSIQQHFMKPLQRFLKPQDMETIFVNIEELFSVHTHFLKELKDA 000000000000000000000000000000000000000000000 LAGPGATTLYQVFIKYKERFLVYGRYCSQVESASKHLDQVATARE 001110000000000000000000000000000000000000000 DVQMKLEECSQRANNGRFTLRDLLMVPMQRVLKYHLLLQELVKHT 000000000000000000000000000000000000000000000 QDATEKENLRLALDAMRDLAQCVNEVKR 1110000000000000000000000124 >LOW-DENSITY LIPOPROTEIN R; SWP:P01130; PDB:1F5YA GSAVGDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCL 876443335442112332211223223454433444323433333 SVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 4443433212235533211224334565544554335544 >TRANSCRIPTION FACTOR WSTF; SWP:Q9UIG0; PDB:1F62A ARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCP 110000111111000000000000000000011111112221101 ACQPAT 111234 >HISTONE ACETYLTRANSFERASE; SWP:Q92830; PDB:1F68A GDQLYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPID 310000000000000000000000000000110000000000000 LKTMTERLRSRYYVTRKLFVADLQRVIANCREYNPPDSEYCRCAS 000000000000000000000000000000000000100000000 ALEKFFYFKLKEG 0000000000114 >DNA TRANSPOSITION PROTEIN; SWP:P03763; PDB:1F6VA GSRIAKRTAINKTKKADVKAIADAWQINGEKELELLQQIAQKPGA 999865311100000000000000000000000000000000000 LRILNHSLRLAAMTAHGKGERVNEDYLRQAFRELDLDVDISTLLR 000000000000000010000000000000000000000001122 N 3 >PROTEIN (Blood Coagulatio; SWP:P08709; PDB:1F7EA SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDGS 421110000000000000001100000000000000000001358 A 9 >CREB-BINDING PROTEIN; SWP:P45481; PDB:1F81A MSPQESRRLSIQRCIQSLVHACQCRNANCSLPSCQKMKRVVQHTK -00000000000000000000000000000000000000000000 GCKRKTNGGCPVCKQLIALCCYHAKHCQENKCPVPFCLNIKHK 0000100000000000000000000000000000000000000 >NEUROPEPTIDE Y (PNPY); SWP:P01304; PDB:1F8PA YPSKPDNPGEDAPAEDLARYYSALRHYINLITRQRY 999999999643210000000000000000000001 >PROTEIN (FADD PROTEIN); SWP:Q61160; PDB:1FADA GSHMAAPPGEAYLQVAFDIVCDNVGRDWKRLARELKVSEAKMDGI ----00000000000000000000000000000000000000000 EEKYPRSLSERVRESLKVWKNAEKKNASVAGLVKALRTCRLNLVA 000000000000000000000000000000000000000000000 DLVEEAQES 000000012 >LARGE T ANTIGEN; SWP:P03074; PDB:1FAFA MDRVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDK 321000000000000000000000000000000000000000000 GGSHALMQELNSLWGTFKTEVYNLRMNLGGTGFQ 0000000000000000000000000112478999 >RAF-1; SWP:P04049; PDB:1FAQ_ LTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKV 642100000001100000000000000000000000000001111 PTMCVD 222357 >IMMUNOGLOBULIN G BINDING; SWP:P19909; PDB:1FCLA TTFKLIINGKTLKGETTTEAVDAATAEKVLKQYINDNGIDGEWTY 100000000000000000000000000000000000000000000 DDATKTWTVTE 00000000000 >FERREDOXIN CHLOROPLASTIC; SWP:P07839; PDB:1FCT_ MAMAMRSTFAARVGAKPAVRGARPASRMSCMA 20000000000001145667999999999999 >IMMUNOGLOBULIN G BINDING; SWP:P19909; PDB:1FD6A MTTFKLIINGKTLKGETTTEAVDAATAEKVFKQYANDNGIDGEWT 000000000000000000000000000000000000000000000 YDDATKTFTVTE 000000000000 >TRF2-INTERACTING TELOMERI; SWP:Q9NYB0; PDB:1FEXA GRIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHS 431100000000000000000101000010000000000111100 WQSLKDRYLKHLRG 00000000000013 >NODULATION PROTEIN F; SWP:P04685; PDB:1FH1A MADQLTLEIISAINKLVKAENGERTSVALGEITTDTELTSLGIDS ----0000000000000---------------------------- LGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVVEAVRGLLTK 0000000000000-----------------00000000000---- EV -- >UNC-89; SWP:O01761; PDB:1FHOA MGDTGKLGRIIRHDAFQVWEGDEPPKLRYVFLFRNKIMFTEQDAS 999876431110000000012211100000001110000001124 TSPPSYTHYSSIRLDKYNIRQHTTDEDTIVLQPQEPGLPSFRIKP 544322321100011110100112211000011112211100001 KDFETSEYVRKAWLRDIAEEQEKYAAERD 12233221111101001111122335799 >VPR PROTEIN; SWP:P05954; PDB:1FI0A EPYNEWTLELLEELKSEAVRH 111100000000000000000 >EH DOMAIN PROTEIN REPS1; SWP:O54916; PDB:1FI6A WKITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILEL 211000000000000000011110000000000000010000000 SHIWELSDFDKDGALTLDEFCAAFHLVVARKNGYDLPEKLPESLM 000000000000000000000000000000011211222234443 PK 57 >NUCLEOLIN RBD1; SWP:P08199; PDB:1FJ7A GSHMLEDPVEGSESTTPFNLFIGNLNPNKSVAELKVAISELFAKN 999999999764310000000000000000000000000000000 DLAVVDVRTGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKLE 000000000011000000000000000000000000100000000 KPKGRDGTRGC 00135799999 >PEPTIDYL PROLYL CIS/TRANS; SWP:Q9Y237; PDB:1FJDA GSGPKGGGNAVKVRHILCEKHGKIMEAMEKLKSGMRFNEVAAQYS 999986530000000000000000000000000000000000000 EDKARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDKPVFTDPPVK 111121210000000111000000000100010111110000000 TKFGYHIIMVEGRK 01100000000001 >DEFENSIN MGD-1; SWP:P80571; PDB:1FJNA GFGCPNNYQCHRHCKSIPGRCGGYCGGWHRLRCTCYRCG 000000000000000000000000000000000000000 >FLI-1; SWP:Q01543; PDB:1FLIA PGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARR 643210100000000000000010001112210000000000000 WGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGI 000000011100000000000000000000111000000111221 AQALQPHP 22223446 >FSD-EY PEPTIDE; SWP:NA; PDB:1FMEA EQYTAKYKGRTFRNEKELRDFIEKFKGR 2100000000000000000000000124 >GENERAL CONTROL PROTEIN G; SWP:P03069; PDB:1FMHA EVAQLEKEVAQAEAENYQLEQEVAQLEHECG 00--0-0-0----0-00---0-0--0-0-12 >GENERAL CONTROL PROTEIN G; SWP:P03069; PDB:1FMHB EVQALKKRVQALKARNYAAKQKVQALRHKCG 0000000000000000000000000000012 >THIOREDOXIN; SWP:Q57755; PDB:1FO5A MSKVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMEN 310000000001123311000000000000000000000000111 PQKAMEYGIMAVPTIVINGDVEFIGAPTKEALVEAIKKRL 1111111111100000000000000000000000000013 >GLUTAREDOXIN 3; SWP:P0AC62; PDB:1FOVA ANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIK 100000000100000000000000000000000111100000000 RSGRTTVPQIFIDAQHIGGYDDLYALDARGGLDPLLK 0000000000000000000000000000000000001 >KAP-1 COREPRESSOR; SWP:Q13263; PDB:1FP0A MRGSHHHHHHGSDIIDEFGTLDDSATICRVCQKPGDLVMCNQCEF 000000000000000000000000000000000000000000000 CFHLDCHLPALQDVPGEEWSCSLCHVLPDLKEEDVDLQACKLN 0000000000000000000000000000000000000000000 >CALCIUM-BINDING PROTEIN N; SWP:Q06389; PDB:1FPWA MGAKTSKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQLAR 997543111111111112111111100000000011111100000 EDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLS 000000001111100000000000000111110000000000000 TTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSM 011111101000000000000000000000000000000012346 VTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSII 666643211000000000001111111000000000001112211 GALNLYDGLI 2112135779 >NUCLEAR FACTOR XNF7; SWP:Q92021; PDB:1FRE_ EKCSEHDERLKLYCKDDGTLSCVICRDSLKHASHNFLPI 000000000000000000000000000000000000000 >P-SELECTIN; SWP:P16109; PDB:1FSB_ TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRE 3211111100000000112110000000000000000012 >DISHEVELLED-1; SWP:P51141; PDB:1FSHA TSSVPGAPQLEEAPLTVKSDMSAIVRVMQLPDSGLEIRDRMWLKI -----------1100000000000000000000000000000000 TIANAVIGADVVDWLYTHVEGFKERREARKYASSMLKHGFLRHTV 000000000000000000000000000000000000000000010 NKITFSEQCYYVFGD 100000001000001 >THYROID TRANSCRIPTION FAC; SWP:P23441; PDB:1FTT_ MRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQ 999985421000000000000011110000000000000000000 VKIWFQNHRYKMKRQAKDKAAQQ 00000000000000135689999 >FUSHI TARAZU PROTEIN; SWP:P02835; PDB:1FTZ_ MDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSER 999997531000000000000000000000000000000000000 QIKIWFQNRRMKSKKDRTLDSSPEH 0000000000113234568999999 >DELTA-CONOTOXIN TXVIA; SWP:P18511; PDB:1FU3A WCKQSGEMCNLLDQNCCDGYCIVLVCT 100000000000000000000000000 >U-SHAPED TRANSCRIPTIONAL; SWP:Q9VPQ6; PDB:1FU9A GSAAEVMKKYCSTCDISFNYVKTYLAHKQFYCKNKP 997653210000000000000000000000000136 >FIRST ZINC FINGER OF U-SH; SWP:Q9VPQ6; PDB:1FV5A GSLLKPARFMCLPCGIAFSSPSTLEAHQAYYCSHRI 111111100000000000000000000000000011 >ORYZAIN BETA CHAIN; SWP:P25777; PDB:1FWOA DHVCDDNFSCPAGSTCSSAFGFRNLSLVWGCSPVE 21122221111110001123565432111000113 >MULTIFUNCTIONAL AMINOACYL; SWP:P07814; PDB:1FYJA DSLVLYNRVAVQGDVVRELKAKKAPKEDVDAAVKQLLSLKAEYKE 100000000000000000000000000000000000000000000 KTGQEYKPGNPP 000111112223 >PHOSPHOGLYCERATE MUTASE; SWP:P36623; PDB:1FZTA MTTEAAPNLLVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLG 112211000000000000000000000000000000000000000 GERLKSRGYKFDIAFTSALQRAQKTCQIILEEVGEPNLETIKSEK 000000000000000000000000000000000000000000000 LNERYYGDLQGLNKDDARKKWGAEQVQIWRRSYDIAPPNGESLKD 000000000000000000000000000000000000000000000 TAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRALIMDLEGLTGD 000000000000000000000000000000000000000000000 QIVKRELATGVPIVYHLDKDGKYVSKELIDN 0000000000000000000000000000001 >CDK-ACTIVATING KINASE ASS; SWP:P51948; PDB:1G25A MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGN 212110000000000001000000000000000000000000000 CPECGTPLRKSNFRVQLFED 00001001111000001235 >GRANULIN A; SWP:P28799; PDB:1G26A VVHCDMEVICPDGYTCCRLPSGAWGCCPFTQ 0000011000110000000111000000123 >TRANSCRIPTIONAL REGULATOR; SWP:P44694; PDB:1G2HA SAVISLDEFENKTLDEIIGFYEAQVLKLFYAEYPSTRKLAQRLGV 211000000000000000000000000000000000000000000 SHTAIANKLKQYGIGK 0000000000000012 >PINCH PROTEIN; SWP:P48059; PDB:1G47A ISEFMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQC ----99875310000000000010000000110000000000000 FQQFPEGLFYEFEGRKYCEHDFQMLFAPCWIL 00000110000000000000000000235--- >FATTY ACID-BINDING PROTEI; SWP:P05413; PDB:1G5WA VDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKN 000000000000000000000000011000000000000000001 GDILTLKTHSTFKNTEISFKLGVEFDETTADDRKVKSIVTLDGGK 100000000011100000000000000000000000000000000 LVHLQKWDGQETTLVRELIDGKLILTLTHGTAVCTRTYEKEA 000000000000000000000000000011000000000001 >ANTIFUNGAL PROTEIN; SWP:Q9RCK8; PDB:1G6EA MINRTDCNENSYLEIHNNEGRDTLCFANAGTMPVAIYGVNWVESG 100000001100000000000000000000000000000000000 NNVVTLQFQRNLSDPRLETITLQKWGSWNPGHIHEILSIRIY 000000000000000000000000000000000000000000 >SHORT NEUROTOXIN 1; SWP:P82849; PDB:1G6MA LECHNQQSSQTPTTTGCSGGENNCYKKEWRDNRGYRTERGCGCPS 000001112221000001110000000000111000000000011 VKKGIGINCCTTDRCNN 22111110000000000 >COLD SHOCK PROTEIN TMCSP; SWP:O54310; PDB:1G6PA MRGKVKWFDSKKGYGFITKDEGGDVFVHWSAIEMEGFKTLKEGQV 000000000000000000000000000000011133311000000 VEFEIQEGKKGPQAAHVKVVE 000000111110000000000 >CLR4 PROTEIN; SWP:NA; PDB:1G6ZA ISSPKQEEYEVERIVDEKLDRNGAVKLYRIRWLNYSSRSDTWEPP --9987544211000000001000000000011223321000000 ENLSGCSAVLAEWKRRKRRLKGSNS 0000000000000000012356899 >ENDOPLASMIC RETICULUM PRO; SWP:P52555; PDB:1G7DA PGCLPAYDALAGQFIEASSREARQAILKQGQDGLSGVKETDKKWA 310000000000000000000000000000000000000000000 SQYLKIMGKILDQGEDFPASELARISKLIENKMSEGKKEELQRSL 000000000000000000000000000000011111100000000 NILTAFRKKGAEKEEL 0000001112122233 >ENDOPLASMIC RETICULUM PRO; SWP:P52555; PDB:1G7EA LHTKGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGEKQDEFKRLA 100110000000000000000000000000111111100000000 ENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFR 011111100000000000111000000000000001100000001 DGDFENPVPYSGAVKVGAIQRWLKGQGVYLGM 11111100000000000000000000101122 >GLUTAREDOXIN 2; SWP:P0AC59; PDB:1G7OA MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVGQ 000000000000000000000000000000000000000000000 KQVPILQKDDSRYMPESMDIVHYVDKLDGKPLLTGKRSPAIEEWL 000000000000000000000000000000000000000000000 RKVNGYANKLLLPRFAKSAFDEFSTPAARKYFVDKKEASAGNFAD 000000000000000000000000000000000111211110000 LLAHSDGLIKNISDDLRALDKLIVKPNAVNGELSEDDIQLFPLLR 000000000000000000000000000000000000000000000 NLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI 00000000000000000000000000000000000 >IMMUNOGLOBULIN E; SWP:P01854; PDB:1G84A SRDFTPPTVKILQSSSDGGGHFPPTIQLLCLVSGYTPGTINITWL 421111000000000134555430000000000000000000000 EDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQV 000111110000000000000000000000000000000000000 TYQGHTFEDSTKKSA 000000000000024 >MYELOID PROGENITOR INHIBI; SWP:P55773; PDB:1G91A MDRFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTK 999998542100100000000000000000001111000000000 KGRRFCANPSDKQVQVCMRMLKLDTRIKTRKN 00000000000000000000012456899999 >PONERATOXIN; SWP:P41736; PDB:1G92A FLPLLILGSLLMTPPVIQAIHDAQR 1111000011111111221111112 >H14; SWP:A2KD53; PDB:1G9EA QVQLQESGGGLVQAGGSLRLSCAASGRTGSTYDMGWFRQAPGKER 210000000000000000000000111111100000000010000 ESVAAINWDSARTYYASSVRGRFTISRDNAKKTVYLQMNSLKPED 000000011210000000000000000000100000000000000 TAVYTCGAGEGGTWDSWGQGTQVTVSS 000000000000000000000000012 >POLYADENYLATE-BINDING PRO; SWP:P11940; PDB:1G9LA GPLGSAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAV 999999999999999999999999999999999999999999999 HVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKIT 976431000000000011000000000000000000000000000 GMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKAV 000000000000000000000000000000000000112345789 NSATGVPTV 999999999 >OMEGA-ATRACOTOXIN-HV2A; SWP:P82852; PDB:1G9PA LLACLFGNGRCSSNRDCCELTPVCKRGSCVSSGPGLVGGILGGIL 210000000000000000000000000000001356899999999 >INTERLEUKIN-13; SWP:P35225; PDB:1GA3A GGPVPPSTALRELIEELVNITQNQKAPLCNGSMVWSINLTAGMYC 864321100000000000000011111111100000001110000 AALESLINVSGCSAIEKTQRMLSGFCPHKVSAGQFSSLHVRDTKI 000000000010000000000000001000112334443321100 EVAQFVKDLLLHLKKLFREGRFN 00000000000000000001357 >GB1-C3B4; SWP:P19909; PDB:1GB4_ MTTFKLIINGKTLKGEITIEAVDAAEAEKIFKQYANDNGIDGEWT 100000000001100000000000000000000000000000000 YDDATKTFTVTE 000000000000 >RIBOSOME RECYCLING FACTOR; SWP:O66928; PDB:1GE9A MIKELEDIFKEAEKDMKKAVEYYKNEIAGLRTSRASTALVEEIKV 421101111111111111111111111111111111111111111 EYYGSKVPIKQLGTISVPEHNQIVIQVWDQNAVPAIEKAIREELN 122222111121111111211111111111111111111011111 LNPTVQGNVIRVTLPPLTEERRRELVRLLHKITEEARVRVRNVRR 110001111111111111111111000000000000010011111 EAKEMIEELEGISEDEKKRALERLQKLTDKYIDEINKLMEAKEKE 111111221222221111101110111011001100111111112 IMSV 1122 >PITUITARY ADENYLATE CYCLA; SWP:P18509; PDB:1GEAA HSDGIFTDSYSRYRKQMAVK 21000000000000000000 >PROTEIN (CDC4P); SWP:Q09196; PDB:1GGWA STDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITE 999775456535545555543345543443345455567786577 IESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDAT 668876653345434544567766654333322332233446656 GMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVKDGMVNYHDFVQ 543222212222333443334443343344333332334344445 MILAN 55679 >TRANSLATION ELONGATION FA; SWP:O27734; PDB:1GH8A MGDVVATIKVMPESPDVDLEALKKEIQERIPEGTELHKIDEEPIA 100000000000000000000000000000000000000000000 FGLVALNVMVVVGDAEGGTEAAEESLSGIEGVSNIEVTDVRRLM 00000000000000000000000000000000000000000001 >8.3 KDA PROTEIN (GENE MTH; SWP:O27252; PDB:1GH9A MYIIFRCDCGRALYSREGAKTRKCVCGRTVNVKDRRIFGRADDFE 000000000000000000000000000000000000000000000 EASELVRKLQEEKYGSCHFTNPSKRE 00000000000124568999999999 >GH1; SWP:P08287; PDB:1GHC_ MAGPSVTELITKAVSASKERKGLSLAALKKALAAGGYDVEKNNSR 422111000000001222221222111000111222110110000 IKLGLKSLVSKGTLVQTKGTGASGSFRLSK 000000000000101122345432211112 >DNA-DAMAGE-INDUCIBLE PROT; SWP:P0ABR1; PDB:1GHHA MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRYA 000000000000000000000000000000000000000000000 AANNLSVIGATKEDKQRISEILQETWESADDWFVSE 000000000000000000000000000000000000 >LAP2; SWP:P42166; PDB:1GJJA MPEFLEDPSVLTKDKLKSELVANNVTLPAGEQRKDVYVQLYLQHL 000000000000000000000000000000000000000000000 TARNRPPLPAGTNSKGPPDFSSDEEREPTPVLGSGAAAAGRSRAA 00000---------------------------------------- VGRKATKKTDKPRQEDKDDLDVTELTNEDLLDQLVKYGVNPGPIV --------------------0000000000000000000000000 GTTRKLYEKKLLKLREQGTESRSSTPLPTISSS 000000000000000000--------------- >IMMUNOGLOBULIN G BINDING; SWP:P19909; PDB:1GJSA MKAIFVLNAQHDEAVDANSLAEAKVLANRELDKYGVSDYYKNLIN 999999999999754210000000000000000000000000000 NAKTVEGVKALIDEILAALP 00000000000000000113 >PYRUVATE DEHYDROGENASE; SWP:Q9JZ09; PDB:1GJXA ALVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKATM 100000000011100000000000000000000000000001000 DVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAEGTA 000000000000000000000000000000000134 >MEGF/TGFALPHA44-50 CHIMER; SWP:P48030; PDB:1GK5A NSYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCEHA 543211000000000000000000000000000001011100111 DLLA 1224 >COMPLEMENT RECEPTOR TYPE; SWP:P17927; PDB:1GKGA EAEAKSCKTPPDPVNGMVHVITDIQVGSRITYSCTTGHRLIGHSS 653221111121111111111111111100011112211111110 AECILSGNTAHWSTKPPICQRIPCGLPPTIANGDFISTNRENFHY 001112222110000111111111111122222222222222211 GSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQC 111111223345544432211111111122333322112122112 I 2 >COMPLEMENT RECEPTOR TYPE; SWP:P17927; PDB:1GKNA EAEAHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEYYGRPF 642211111111111001111211111111100000111111111 SITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVITDIQVGSRI 001121211111111111111111111111100011111111100 TYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQRIP 00011111111110000011121110000001111122 >CYTOCHROME C551; SWP:P00122; PDB:1GKS_ DGESIYINGTAPTCSSCHDRGVAGAPELNAPEDWADRPSSVDELV 110000000000000000000000000000000000000000000 ESTLAGKGAMPAYDGRADREDLVKAIEYMLSTL 000000000000000000000000000000001 >TYROSINE-PROTEIN KINASE T; SWP:P24604; PDB:1GL5A GSEIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYG 311000000000111100000000000000011100000000111 SEGYIPSNYVTGKKSNNLDQYD 1000000000011234679999 >TRANSCRIPTION FACTOR GATA; SWP:P17679; PDB:1GNF_ GSEARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPLI 422110000000111111111111000000000000000000113 R 4 >PROTEIN (SCAFFOLDING PROT; SWP:P26748; PDB:1GP8A ITGDVSAANKDAIRKQMDAAASKGDVETYRKLKAKLKGIR 7631100000000000000000000000000000001113 >GAMMA-1-P THIONIN; SWP:P20158; PDB:1GPS_ KICRRRSAGFKGPCMSNKNCAQVCQQEGWGGGNCDGPFRRCKCIR 100000011111111110000000000000000011111000000 QC 01 >GAMMA-1-H THIONIN; SWP:P20230; PDB:1GPT_ RICRRRSAGFKGPCVSNKNCAQVCMQEGWGGGNCDGPLRRCKCMR 100000011111111100000000000000000001221000000 RC 11 >MYOSIN BINDING PROTEIN C,; SWP:Q14896; PDB:1GXEA MHHHHHHSSRQEPPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGD ---------100000001111100000000000000000000000 PAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCET 000000000012356899999999999999999999999986433 EGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTV 431000000000000000010121000000000000000000000 KVID 0000 >COLICIN E8 IMMUNITY PROTE; SWP:P09881; PDB:1GXGA MELKNSISDYTETEFKKIIEDIINCEGDEKKQDDNLEHFISVTEH 000000000000000000000000000000000000000000000 PSGSDLIYYPEGNNDGSPEAVIKEIKEWRAANGKSGFKQG 0000000000000000000000000000000000000000 >PHOTOSYSTEM I REACTION CE; SWP:P12975; PDB:1GXIE ALNRGDKVRIKRTESYWYGDVGTVASVEKSGILYPVIVRFDRVNY 110100000001111000000000001011111000000011123 NGFSGSASGVNTNNFAENELELVQAAAK 3467654431000000000000000012 >SERINE PROTEASE INHIBITOR; SWP:Q9NQ38; PDB:1H0ZA ESGKATSYAELCNEYRKLVRNGKLACTRENDPIQGPDGKVHGNTC 975321000000000000011110011111110000110000000 SMCEVFFQAEEEEKKKKEGESRN 00000000000001123457899 >THO1 PROTEIN; SWP:P40040; PDB:1H1JS GSADYSSLTVVQLKDLLTKRNLSVGGLKNELVQRLIKDDEESKGE 42000000000000000000000000000000000000001356- SEVSPQ ------ >METALLOCARBOXYPEPTIDASE I; SWP:P01075; PDB:1H20A EQHADPICNKPCKTHDDCSGAWFCQACWNSARTCGPYVG 642100000000000000000000000000000000012 >HYPOTHETICAL 62.8 KDA PRO; SWP:O94312; PDB:1H3ZA GSERVNYKPGMRVLTKMSGFPWWPSMVVTESKMTSVARKSKPKRA -42100000000000000000000000000000000000000100 GTFYPVIFFPNKEYLWTGSDSLTPLTSEAISQFLEKPKPKTASLI 000000000000000000000000000000000000000000000 KAYKMAQSTPDLDSLSVPS 0000000000000000112 >POLCALCIN BET V 4; SWP:Q39419; PDB:1H4BA ADDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDE 210000000000000000000000000000000000000000000 VKHMMAEIDTDGDGFISFQEFTDFGRANRGLLKDVAKIF 000000000000000000000000000000000000000 >MYOTOXIN; SWP:P01475; PDB:1H5OA YKQCHKKGGHCFPKEKICLPPSSDFGKMDCRWRWKCCKKGSG 100000000000001111112210000001010000002466 >NUCLEAR AUTOANTIGEN SP100; SWP:P23497; PDB:1H5PA MDENINFKQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWF 311101001000000000000000000000000000000010000 TPREFEIEGDRGASKNWKLSIRCGGYTLKVLMENKFLPEPPSTRK 000000000000010000000000000000000000011343445 KVTIK 55444 >CALPONIN ALPHA; SWP:P26932; PDB:1H67A MPQTERQLRVWIEGATGRRIGDNFMDGLKDGVILCELINKLQPGS 211211000000000000111110000000100000000000000 VQKVNDPVQNWHKLENIGNFLRAIKHYGVKPHDIFEANDLFENTN 011000011000000000000000000000000000000000000 HTQVQSTLIALASQAKTK 000000000000000011 >TRANSLATIONALLY CONTROLLE; SWP:Q10344; PDB:1H6QA MLLYKDVISGDELVSDAYDLKEVDDIVYEADCQMVTVKQGGDVDI 000000000000000000000000000000000000000000000 GANPSAEDAEENAEEGTETVNNLVYSFRLSPTSFDKKSYMSYIKG 000000000000000000000000000000000000000000000 YMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGES 000000000000000000000000000000000000000000000 MDPDAMVVLMNYREDGITPYMIFFKDGLVSEKF 000000000000000000000000000000000 >AMINOLEVULINIC ACID SYNTH; SWP:P08680; PDB:1H7DA MVAAAMLLRSCPVLSQGPTGLLGKVAKTYQFLFSIGRCPILATQG 999999999999999865432111000000000113567999999 PTCS 9999 >ALPHA-ACTININ 2, SKELETAL; SWP:P35609; PDB:1H8BA GAMADTDTAEQVIASFRILASDKPYILAEELRRELPPDQAQYCIK -------------------------------------776----- RMPAYSGPGSVPGALDYAAFSSALYGESDL 7----------------------------- >TITIN; SWP:O97791; PDB:1H8BB GAMGKVGVGKKAEAVATVVAAVDQARVREPREPGLPEDSYAQQTT --------32111101111212233346789-------------- LEYGYKEH -------- >FAS-ASSOCIATED FACTOR 1; SWP:Q9UNN5; PDB:1H8CA NAEPVSKLRIRTPSGEFLERRFLASNKLQIVFDFVASKGFPWDEY 542000000000000000000000000000000000000011110 KLLSTFPRRDVTQLDPNKSLLEVKLFPQETLFLEAKE 0000000000000000000000000000000000012 >SYNAPTOBREVIN HOMOLOG 1; SWP:P36015; PDB:1H8MA MRIYYIGVFRSGGEKALELSEVKDLSQFGFFERSSVGQFMTFFAE 000000000000000000000000000000000000000000000 TVASRTGAGERQSIEEGNYIGHVYARSEGICGVLITDKQYPVRPA 000000000000000000000000000000000000000000000 YTLLNKILDEYLVAHPKEEWADVTETNDALKMKQLDTYISKYQDP 000000000000000000000000000000000000000000000 SQADA 00000 >Y-BOX BINDING PROTEIN; SWP:P67809; PDB:1H95A MKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNN 642000000000011011211000000100000000000001245 PRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPG 5555443211000000000022110000001124 >MACROPHAGE INFLAMMATORY P; SWP:O89093; PDB:1HA6A ASNYDCCLSYIQTPLPSRAIVGFTRQMADEACDINAIIFHTKKRK 642110000000000000000000000000000000000000000 SVCADPKQNWVKRAVNLLSLRVKKM 0000000000000000000000123 >PHEROMONE; SWP:P58547; PDB:1HA8A GECEQCFSDGGDCTTCFNNGTGPCANCLAGYPAGCSNSDCTAFLS 000000000000000000000000000000000000000000000 QCYGGC 000001 >REGULATORY PROTEIN GAL4; SWP:P04386; PDB:1HBWA TRAHLTEVESRLERLEQLFLLIFPREDLDMILKMDSLRDIEALLT 776543222222122223344335666533212222212221222 GLFVQDNVNKDA 223467999999 >HISACTOPHILIN; SWP:P13231; PDB:1HCD_ MGNRAFKSHHGHFLSAEGEAVKTHHGHHDHHTHFHVENHGGKVAL 000000000000000000000000000000000000000000000 KTHCGKYLSIGDHKQVYLSHHLHGDHSLFHLEHHGGKVSIKGHHH 000000000000000000000000000000000000000000000 HYISADHHGHVSTKEHHDHDTTFEEIII 0000000000000000000000000000 >BBA1; SWP:NA; PDB:1HCW_ YTVPSTFSRSDELAKLLRLHAG -----10110000000000001 >PHEROMONE ER-22; SWP:P58548; PDB:1HD6A DICDIAIAQCSLTLCQDCENTPICELAVKGSCPPPWS 0000000000000000000000000000000001112 >HUMAN HSP40; SWP:P25685; PDB:1HDJ_ MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKF 532100000001111000000000000011112222222100000 KEIAEAYDVLSDPRKREIFDRYGEEGLKGSGC 00000000000011000000111222234689 >SERINE PROTEINASE INHIBIT; SWP:Q9NQ38; PDB:1HDLA KNEDQEMCHEFQAFMKNGKLFCPQDKKFFQSLDGIMFINKCATCK 755433111111111111111111111000000000000000000 MILEKEAKSQ 0000000134 >OCT-2 POU HOMEODOMAIN; SWP:P09086; PDB:1HDP_ RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVI 000000000000000000000000000000000000000000000 RVWFCNRRQKEKRINPCS 000000000000000000 >FACTOR H, 15TH AND 16TH C; SWP:P08603; PDB:1HFH EKIPCSQPPQIEHGTINSSRSSQESYAHGTKLSYTCEGGFRISEE 000000000000000000000000000000000000000000000 NETTCYMGKWSSPPQCEGLPCKSPPEISHGVVAHMSDSYQYGEEV 000000000000000000000000000000000000000000000 TYKCFEGFGIDGPAIAKCLGEKWSHPPSCI 000000000000000000000000000000 >CALRETICULIN; SWP:P18418; PDB:1HHNA SKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKK 999999999999987554321223333323222211110011111 PEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEI 122111111110000111111222222211123444567999999 DNPEYSPDANI 99999999999 >THYMOSIN BETA9; SWP:P21752; PDB:1HJ0A ADKPDLGEINSFDKAKLKKTETQEKNTLPTKETIEQEKQAK 00000000000000000000000000000000000000000 >HEAT-SHOCK TRANSCRIPTION; SWP:P22813; PDB:1HKS_ GSGVPAFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKEL 000000000000000000000000000000000000000000000 LPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFDRDEIEFSHP 000000000000000000000000000000000000000000000 FFKRNSPFLLDQIKRK 0000000000000000 >MICRONEME PROTEIN 5 PRECU; SWP:Q9U966; PDB:1HKYA DYKDDDDKVKLTCYQNGVSFTGGKAISEAKAASSQACQELCEKDA 999999999975321110000000000000000000000000000 KCRFFTLASGKCSLFADDAALRPTKSDGAVSGNKRCILLED 00000000000000001111000111100000122467999 >ALPHA-2A ADRENERGIC RECEP; SWP:P08913; PDB:1HLLA TSSIVHLCAISLDRYWSITQAIEYNLKRTPRR 00000000000000000000000000000000 >HONGOTOXIN 1; SWP:P59847; PDB:1HLYA TVIDVKCTSPKQCLPPCKAQFGIRAGAKCMNGKCKCYPH 000000000000000000000010000000000000001 >HIGH MOBILITY GROUP PROTE; SWP:P63159; PDB:1HME_ FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMW 000000000000000000000000000000000000000000000 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 00000000000000000000000000000000 >PROTEIN (SUBUNIT H); SWP:Q58443; PDB:1HMJA MKVTDHILVPKHEIVPKEEVEEILKRYNIKIQQLPKIYEDDPVIQ ---------000000000000000000000000000000000000 EIGAKEGDVVRVIRKSPTAGVSIAYRLVIKRII 00000000000000000000000000000000- >P19 ARF PROTEIN; SWP:NA; PDB:1HN3A GSHMGRRFLVTVRIQRAGRPLQERVFLVKFVRSRRPRTAS 9997533322222122222343222222233347899999 >INSULIN; SWP:P01317; PDB:1HO0A FVNQHLSGSHLVEALYLVSGERGFFYTPKA 999874200000000000001222234689 >TITYUSTOXIN K ALPHA; SWP:P46114; PDB:1HP2A VFINAKCRGSPECLPKCKEAIGKAAGKCMNGKCKCYP 1000100010000000000000000000000000001 >PHENOL HYDROXYLASE P2 PRO; SWP:P19731; PDB:1HQI_ MSSLVYIAFQDNDNARYVVEAIIQDNPHAVVQHHPAMIRIEAEKR 542211111111213222322322433211122221111111221 LEIRRETVEENLGRAWDVQEMLVDVITIGGNVDEDDDRFVLEWKN 111223222223212322222221232222222233321112479 >HEREGULIN ALPHA; SWP:Q02297; PDB:1HRE GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGA 000000000000000000000000000000000000000000000 RCTENVPMKVQNQEKAEELYQK 0000000000000000000000 >PARALYTIC PEPTIDE I; SWP:P30253; PDB:1HRLA ENFAGGCATGYLRTADGRCKPTF 11121000000000000000001 >SYNTAXIN VAM3; SWP:Q12241; PDB:1HS7A TNQKTKELSNLIETFAEQSRVLEKECTKIGSKRDSKELRYKIETE 300000000000000000000000000000000000000000000 LIPNCTSVRDKIESNILIHQNGKLSADFKNLKTKYQSLQQSYNQR 000000000000000000000000000000000000000000000 KSLFPLK 0000001 >PHOSPHOLIPASE C-GAMMA (SH; SWP:P19174; PDB:1HSQ_ GSPTFKCAVKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGD 000000000000000000000000000000000000000000000 YGGKKQLWFPSNYVEEMVNPEGIHRD 00000000000000000000000000 >HU PROTEIN; SWP:P0A3H0; PDB:1HUEA MNKTELINAVAETSGLSKKDATKAVDAVFDSITEALRKGDKVQLI 211110011011111110000000000011111111222111001 GFGNFEVRERAARKGRNPQTGEEMEIPASKVPAFKPGKALKDAVK 101111122222123579998642212222221111111111122 >INSULIN; SWP:P01308; PDB:1HUIB EVNQHLCGSELVEALELVCGERGFFYEPK 999965432211000000023-------- >OMEGA-ATRACOTOXIN-HV1A; SWP:P56207; PDB:1HVWA CIPSGQPCPYNENCCSQSCTGGRCD 0000000000000000000000000 >BSTI; SWP:Q90248; PDB:1HX2A NFVCPPGQTFQTCASSCPKTCETRNKLVLCDKKCNQRCGCISGTV 210001000000001000000010011001110000000000000 LKSKDSSECVHPSKC 000000000000011 >TRIGGER FACTOR; SWP:P47480; PDB:1HXVA MRGSHHHHHHGSEKLAKTKSTMVDVSDKKLANGDIAIIDFTGIVD ----------------------------00000000000000000 NKKLASASAQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFP 000000000000000000000000000000000000000000000 SDYHVKELQSKPVTFEVVLKAIK 00000000000000000000000 >COCAINE AND AMPHETAMINE R; SWP:Q16568; PDB:1HY9A YGQVPMCDAGEQCAVRKGARIGKLCDCPRGTSCNSFLLKCL 42110001111000000110000000011111011111011 >AGOUTI RELATED PROTEIN; SWP:O00253; PDB:1HYKA CVRLHESCLGQQVPCCDPCATCYCRFFNAFCYCRKLGTAMNPCSR 000000000000000000000000000000000000001110011 T 2 >HEAD-TO-TAIL JOINING PROT; SWP:P68660; PDB:1HYWA MTRQEELAAARAALHDLMTGKRVATVQKDGRRVEFTATSVSDLKK 320000000000000000000000000000000000000000000 YIAELEVQTGMTQRRRGPAGFYV 0000000001124---------- >DUAL SPECIFICITY PROTEIN; SWP:Q16828; PDB:1HZMA MIDTLRPVPFASEMAISKTVAWLNEQLELGNERLLLMDCRPQELY 000000000000000000000000000000000000000000000 ESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRC 000000000000000000000000000000000000000000000 GTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCRAFYLEGG 000000000000000000000000000000000000000000000 FSKFQAEFSLHCETNLDGS 0000000000000000000 >TRANSCRIPTION FACTOR SOX-; SWP:P35710; PDB:1I11A GSPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKA --6433221000000000000000110100010000000000000 MTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRT 010000000000000001112223456--------- >INTERLEUKIN 16; SWP:Q14005; PDB:1I16_ MPDLNSSTDSAASASAASDVSVESTAEATVCTVTLEKMSAGLGFS 999999999999999999999998742000000000011100000 LEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAM 000113443211000000001221221100000000000000000 QGLTRFEAWNIIKALPDGPVTIVIRRKSLQSKETTAAGDS 0000000000000000000000000012468999999999 >PRION-LIKE PROTEIN; SWP:Q9QUG3; PDB:1I17A RVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGC 753100000000000000000000000000000000000000000 SEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIK 000000000000000000000000000000000000000000000 EICSAKHCDFWLERGAA 00000000111123589 >HUWENTOXIN-II; SWP:P82959; PDB:1I25A LFECSFSCEIEKEGDKPCKKKKCKGGWKCKFNMCVKV 2211111011111222111111000000000000000 >PTU-1; SWP:P58606; PDB:1I26A AEKDCIAPGAPCFGTDKPCCNPRAWCSSYANKCL 4322111100000221000100000000000000 >PROTEIN KINASE BYR2; SWP:P28829; PDB:1I35A CILRFIACNGQTRAVQSRGDYQKTLAIALKKFSLEDASKFIVCVS 100000001100000011110000000000000000001000001 QSSRIKLITEEEFKQICFNSSSPERDRLIIVPKEKPCPSFEDLRR 221110000000000011133334311000001111121111122 SWEIE 32333 >APOLIPOPROTEIN CII; SWP:P02655; PDB:1I5JA TQQPQQDEMPSPTFLTQVKESLSSYWESAKTAAQNLYEKTYLPAV ------------998765554433432343345556777789999 DEKLRDLYSKSTAAMSTYTGIFTDQVLSVLKGEE 9999999999999999978755545567889998 >BAG-FAMILY MOLECULAR CHAP; SWP:Q60739; PDB:1I6ZA GSPEFMLIGEKSNPEEEVELKKLKDLEVSAEKIANHLQELNKELS 999999998754211100000000000000000000000000111 GIQQGFLAKELQAEALCKLDRKVKATIEQFMKILEEIDTMVLPEQ 111222111100000000000000000000000000011111221 FKDSRLKRKNLVKKVQVFLAECDTVEQYICQETERLQSTNLALAE 110000000000000000000000000000011111234689999 >GRANULIN-1; SWP:P81013; PDB:1I8XA VIHCDAATICPDGTTCSLSPYGVWYCSPFS 001000100001000000000000000001 >GLUCOSE PERMEASE; SWP:P69786; PDB:1IBA_ MAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGA 000000000000000000000000000000111100000000000 AGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNFG 000000000000011100000000000010011 >DNA FRAGMENTATION FACTOR; SWP:P19909; PDB:1IBXA MLQKPKSVKLRALRSPRKFGVAGRSCQEVLRKGCLRFQLPERGSR ---99--------3--------------------9---------- LCLYEDGTELTEDYFPSVPDNAELVLLTLGQAWQGHHHHHH 5-3-6654----3---------------------------- >CHIMERA OF IGG BINDING PR; SWP:P19909; PDB:1IBXB MQYKLILNGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTY --------------------------------------------- DDATKTFTVTESGEIRTLKPCLLRRNYSREQHGVAASCLEDLRSK --------------------------------------------- ACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSNTKFVALAS --------------------------------------------- NEKWAYNNSD ---------- >INSECT DEFENSIN A; SWP:P10891; PDB:1ICA_ ATCDLLSGTGINHSACAAHCLLRGNRGGYCNGKGVCVCRN 3211234543211000000000000000000010000001 >NEURAL CELL ADHESION MOLE; SWP:P13590; PDB:1IE5A GKDIQVIVNVPPSVRARQSTMNATANLSQSVTLACDADGFPEPTM 755653221000000000000000000000000000000000000 TWTKDGEPIEQEDNEEKYSFNYDGSELIIKKVDKSDEAEYICIAE 000000000001100000000111000000000000000000000 NKAGEQDATIHLKVFAK 00000000000000001 >BRUC.D4.4; SWP:NA; PDB:1IEHA DVQLQASGGGLVQPGGSLRVSCAASGFTFSSYHMAWVRQAPGKGL 100000000000000000000000001010000000000011100 EWVSTINPGDGSTYYADSVKGRFTISRDNAKNTLYLQMNSLKSED 000000001200000000010000000011000000000000000 TAVYYCAKYSGGALDAWGQGTQVTVSSQSEQKLISEEDLNHHHHH 000000000111100010000000001357999999999999999 >PROTEIN TIA; SWP:P58811; PDB:1IENA FNWRCCLIPACRRNHKKFC 1100000000000010111 >POLYADENYLATE-BINDING PRO; SWP:P04147; PDB:1IFWA GPLGSPRNANDNNQFYQQKQRQALGEQLYKKVSAKTSNEEAAGKI 999999999997643310000000000000000000000000000 TGMILDLPPQEVFPLLESDELFEQHYKEASAAYESFKKEQEQQTE 000000000000000000000000000000000000000123346 QA 78 >MODULATOR RECOGNITION FAC; SWP:Q14865; PDB:1IG6A RADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKL 000000000000000000111001111111110000000000000 GGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYER 000000000000000000001121111000000000000000000 FIKGEEDKPLPPIKPRK 00011245899999999 >INSULIN-LIKE GROWTH FACTO; SWP:P01344; PDB:1IGL_ AYRPSETLCGGELVDTLQFVCGDRGFYFSRPASRVSRRSRGIVEE 653321111110000000000011001112346998754311001 CCFRSCDLALLETYCATPAKSE 0011111100000001234679 >CHIMERIC PEPTIDE GlyTM1bZ; SWP:P04692; PDB:1IHQA GAGSSSLEAVRRKIRSLQEQNYHLENEVARLKKLVGER 99642000000000000000000000000000000012 >PROTEIN (HLA-DR ANTIGENS; SWP:P04233; PDB:1IIEA YGNMTEDHVMHLLQNADPLKVYPPLKGSFPENLRHLKNTMETIDW 321000000000000000000000000000000000000000000 KVFESWMHHWLLFEMSRHSLEQKPTDAPPK 000000000000000000112234679999 >conserved hypothetical pr; SWP:NA; PDB:1IIOA GSHMKMGVKEDIRGQIIGALAGADFPINSPEELMAALPNGPDTTC ---422000000000000000000000000000000000010000 KSGDVELKASDAGQVLTADDFPFKSAEEVADTIVNKAGL 001000000000000000000000000000000000000 >conserved hypothetical pr; SWP:O26981; PDB:1ILOA MMKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIKEMDQILE 000000001100000000000000000000000000000000000 AGLTALPGLAVDGELKIMGRVASKEEIKKILS 00000000000000000000000000000001 >CYSTEINE RICH INTESTINAL; SWP:P63255; PDB:1IML_ PKCPKCDKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEH 100000000000000000000000000000000000001100000 EGKPYCNHPCYSAMFGPKGFGRGGAESHTFK 1100000000000113579999999999999 >INTESTINAL TOXIN 1; SWP:P25687; PDB:1IMT_ AVITGACERDLQCGKGTCCAVSLWIKSVRVCTPVGTSGEDCHPAS 764310000000101000000112111100000000000000000 HKIPFSGQRMHHTCPCAPNLACVQTSPKKFKCLSK 00000110000000000000000000000000002 >HYPOTHETICAL PROTEIN HI02; SWP:P71346; PDB:1IMUA MTLNITSKQMDITPAIREHLEERLAKLGKWQTQLISPHFVLNKVP 110000000000000000000000000000000000000000000 NGFSVEASIGTPLGNLLASATSDDMYKAINEVEEKLERQLNKLQH 000000000000000000000000000000000000000000000 KSESRRADERLKDSFEN 13568999999999999 >APOC-I; SWP:P02654; PDB:1IOJ_ TPDVSSALDKLKEFGNTLEDKARELISRIKQSELSAKMREWFSET 999999988865444322232244446656655543332222232 FQKVKEKLKIDS 232344567999 >Betacellulin; SWP:P35070; PDB:1IOXA RKGHFSRCPKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCER 432100000000000000000000000000000000000000000 VDLFY 00134 >BEM1 PROTEIN; SWP:P29366; PDB:1IP9A GAMGSSTSGLKTTKIKFYYKDDIFALMLKGDTTYKELRSKIAPRI 999999974310000000000000000000000000000000000 DTDNFKLQTKLFDGSGEEIKTDSQVSNIIQAKLKISVHDI 0000000000000000000000000000000000000000 >RALBP1-INTERACTING PROTEI; SWP:Q8NFH8; PDB:1IQ3A GSLQDNSSYPDEPWRITEEQREYYVNQFRSLQPDPSSFISGSVAK 999999986644322221111000000000001011000100000 NFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLIVARKN 000123211111000000000000000000000000000000011 GYPLPEGLPPTLQPEFIVTD 21233223567899999999 >HYPOTHETICAL PROTEIN MTH1; SWP:O27908; PDB:1IQOA LFIATLKGIFTLKDLPEEFRPFVDYKAGLEKKKLSDDDEIAIISI 211100000011121112111100000001111111110000001 KGTQSNHVLFLSSYNSVDEIRKELEEAGAKINHTTLKILEGHL 1222110000111111100000000000011211100000011 >tissue factor pathway inh; SWP:P10646; PDB:1IRHA EFHGPSWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNE 432111000000011111100000000000000000001111000 NNFTSKQECLRACKKG 0000000000000012 >paralytic peptide; SWP:Q95YI2; PDB:1IRRA ENFVGGCATGFKRTADGRCKPTF 98652100000000000000000 >hMTH1; SWP:P36639; PDB:1IRYA MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETI 421000000000000000000000001000000000000000000 EDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDS 000000000000000000000000000000000000000000000 IQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHG 001000000000000000000000000000000000000000000 YFKFQGQDTILDYTLREVDTV 000000000000000000123 >ARR10-B; SWP:O49397; PDB:1IRZA TAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLT 754322211110000000000000000000000000000000000 RENVASHLQKFRVALKKVS 0000000000000111346 >INTERFERON ALPHA-2A; SWP:P01563; PDB:1ITF_ CDLPQTHSLGSRRTLMLLAQMRKISLFSCLKDRHDFGFPQEEFGN 222333221000000000000000000000000000000000000 QFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQ 001100000000000000000000000000000000000000000 QLNDLEACVIQGVGVTETPLMKEDSILAVRKYFQRITLYLKEKKY 000000000001111222111000000000000000000000000 SPCAWEVVRAEIMRSFSLSTNLQESLRSKE 000000000000000000000012235699 >centromere abp1 protein; SWP:NA; PDB:1IUFA GIHMGKIKRRAITEHEKRALRHYFFQLQNRSGQQDLIEWFREKFG 000000000000000000000000000000000000000000000 KDISQPSVSQILSSKYSYLDNTVEKPWDVKRNRPPKYPLLEAALF 000000000000000000000000000000000000000000000 EWQVQQGDDATLSGETIKRAAAILWHKIPEYQDQPVPNFSNGWLE 000000000000000000000000000000000000000000000 GFRKRHILH 000000000 >KIAA0730 protein; SWP:Q9NZJ4; PDB:1IURA MHHHHHHLVPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWH 999999864232100000000000000010000000000000000 PDKNPENHDIANEVFKHLQNEINRLEKQAFLDQNADRASRRTF 0111110000000000000000000000011245799999999 >cullin-3 homologue; SWP:Q9JLV5; PDB:1IUYA MAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNV 999999999999999976532110000000000000000000000 LVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTY 000000000000001000000000000000000000000000000 VA 00 >hypothetical protein; SWP:P83694; PDB:1IV0A MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLD 000000001100000000012122221000000000000000000 FVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVEL 000000000000112344566655431000000000000000000 WDERFTTK 12357999 >lysozyme M; SWP:P08905; PDB:1IVMA KVYERCEFARTLKRNGMAGYYGVSLADWVCLAQHESNYNTRATNY 100000000000000000000000000000000000000000000 NRGDQSTDYGIFQINSRYWCNDGKTPRAVNACGINCSALLQDDIT 111110000000000000001122111110001000000000000 AAIQCAKRVVRDPQGIRAWVAWRAHCQNRDLSQYIRNCGV 0000000000000000000000000000000000000122 >hypothetical protein 1110; SWP:Q9D1H1; PDB:1IVZA GSSGSSGSSSSQHFNLNFTITNLPYSQDIAQPSTTKYQQTKRSIE 999987542100000000000000000000011000000000000 NALNQLFRNSSIKSYFSDCQVLAFRSVSNNNNHTGVDSLCNFSPL 000000000000000000000000001111000000000000000 ARRVDRVAIYEEFLRMTHNGTQLLNFTLDRKSVFVDSGPSSG 010000000000000000000000000000000000012467 >trypsin inhibitor; SWP:P16589; PDB:1IW4A AHMDCTEFNPLCRCNKMLGDLICAVIGDAKEEHRNMCALCCEHPG 311111211100001111100000000100000000000000012 GFEYSNGPCE 1100000111 >gastric H/K-ATPase; SWP:P19156; PDB:1IWCA MGKAENYELYQVELGPGPSGDMAAKMSKKKAGRG 8643333222222224466555433344456899 >FKBP; SWP:O52980; PDB:1IX5A MVDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPL 110111100000000011110000000000011111111111000 EFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAYGNRNEMLIQ 000011000000000000111100000000010010111111110 KIPRDAFKEADFEPEEGMVILAEGIPATITEVTDNEVTLDFNHEL 000000011121100110001111100000011110000001110 AGKDLVFTIKIIEVVE 1110000000000112 >Cylindromatosis tumour-su; SWP:Q9NQC7; PDB:1IXDA GSSGSSGLAMPPGNSHGLEVGSLAEVKENPPFYGVIRWIGQPPGL 999999763233211000000000000000000000000000000 NEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCRPD 000000000000000000000000000000000000000000000 SRFASLQPSGPSSG 00011245799999 >spasmodic protein tx9a-li; SWP:Q9GU57; PDB:1IXTA SCNNSCQSHSDCASHCICTFRGCGAVN 100000000000000000000000000 >OMSVP3; SWP:P67954; PDB:1IY6A AVSVDCSEYPKCACTMEYRPLCGSDNKTYGNKCNFCCAVVESNGT 311111211111111111000000000000000000000000000 LTLSHFGKC 000000001 >scarabaecin; SWP:Q86SC0; PDB:1IYCA ELPKLPDDKVLIRSRSNCPKGKVWNGFDCKSPFAFS 321000112110111000000000000000000002 >parkin; SWP:O60260; PDB:1IYFA GPLGSMIVFVRFNSSHGFPVEVDSDTSIFQLKEVVAKRQGVPADQ -----0000000011100000000000000000000000000000 LRVIFAGKELRNDWTVQNCDLDQQSIVHIVQRPWRK 000000000000000000000000000000112456 >Hypothetical protein (201; SWP:NA; PDB:1IYGA GSSGSSGMEAVLNELVSVEDLKNFERKFQSEQAAGSVSKSTQFEY 997531000000000000000000000000001100000000000 AWCLVRSKYNEDIRRGIVLLEELLPKGSKEEQRDYVFYLAVGNYR 000000000000000000000000000100000000000000000 LKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKKSGPSSG 0000000000000000000000000000000000001135589 >EL5; SWP:Q9LRB7; PDB:1IYMA AMDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHST 543210000000000000000000000000000000000000000 CPLCRLTVVV 0000000011 >DNA FRAGMENTATION FACTOR; SWP:O00273; PDB:1IYRA GSHMTGISRETSSDVALASHILTALREKQAPELSLSSQDLELVTK ----64345788754210000000000001101100000000000 EDPKALAVALNWDIKKTETVQEACERELALRLQQTQSLHSLRSIS 000000000000000000000000000000011234699999--- ASKASPPGDLQNPKRARQDPT --------------------- >Hypothetical Protein 1810; SWP:NA; PDB:1J0GA GSEGAATMSKVSFKITLTSDPRLPYKVLSVPESTPFTAVLKFAAE 987654310000000000111100000000000000000000000 EFKVPAATSAIITNDGIGINPAQTAGNVFLKHGSELRIIPRDRVG 000000000000001010000000000000000000000002445 SC 79 >Interleukin-18; SWP:Q14116; PDB:1J0SA YFGKLESKLSVIRNLNDQVLFIDQGNRPLFEDMTDSDCRDNAPRT 100000000000000000000000000000001233333332220 IFIISMYKDSQPRGMAVTISVKCEKISTLSCENKIISFKEMNPPD 000000000111100000000000000000000000000000000 NIKDTKSDIIFFQRSVPGHDNKMQFESSSYEGYFLACEKERDLFK 000000000000000001110000000000000000000000000 LILKKEDELGDRSIMFTVQNED 0000000000000000000001 >MOLT-INHIBITING HORMONE; SWP:P55847; PDB:1J0TA ASFIDNTCRGVMGNRDIYKKVVRVCEDCTNIFRLPGLDGMCRNRC 432100000000000000000000000000000000000000000 FYNEWFLICLKAANREDEIEKFRVWISILNAGQ 000000000000000000000000000000011 >Small Protein B; SWP:Q8RR57; PDB:1J1HA MAPVLENRRARHDYEILETYEAGIALKGTEVKSLRAGKVDFTGSF 321000000000000000000000000000000000000000000 ARFEDGELYLENLYIAPYEKGSYANVDPRRKRKLLLHKHELRRLL 000000000000000001345667542122110000000000000 GKVEQKGLTLVPLKIYFNERGYAKVLLGLARGKKAYEKRREDKKE 000010000000000000000000000000003------------ AVRRALEEL --------- >immature colon carcinoma; SWP:Q8R035; PDB:1J26A GSSGSSGEHAKQASSYIPLDRLSISYCRSSGPGGQNVNKVNSKAE 999999997543210000000000000012344433222110000 VRFHLASADWIEEPVRQKIALTHKNKINKAGELVLTSESSRYQFR 000000000000000000000000000000000000000000000 NLAECLQKIRDMIAEASGPSSG 0000000000000000012457 >Fusion of Rhombotin-2 and; SWP:P25801; PDB:1J2OA GSLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGR 431111122111111100001111000111111223334578998 RLYYKLGRKLCRRDYLRLGGSGGHMGSGGDVMVVGEPTLMGGEFG 642223322111111112323445656689999999987765555 DEDERLITRLENTQFDAANGIDDE 554321111011233568999989 >High mobility group prote; SWP:P17741; PDB:1J3CA MKKKDPNAPKRPPSAFFLFCSEYRPKIKSEHPGLSIGDTAKKLGE 643212110100000000000000000000000000000000000 MWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAK 0000000000000000000000000000001123 >AmpD protein; SWP:P82974; PDB:1J3GA MLLDEGWLAEARRVPSPHYDCRPDDENPSLLVVHNISLPPGEFGG 211121100000000010000000000000000000000000000 PWIDALFTGTIDPNAHPYFAGIAHLRVSAHCLIRRDGEIVQYVPF 000000000000000000000000000000000000000000000 DKRAWHAGVSSYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAA 000000000000000000000000000000000000000000000 VTNALITRYPAIANNMTGHCNIAPERKTDPGPSFDWARFRALVTP 000000000000000000000000000000000000000000001 SSHKEMT 1122356 >Cytochrome c; SWP:P99999; PDB:1J3SA GDVEKGKKIFIMKCSQCHTVEKGGKHKTGPNLHGLFGRKTGQAPG 110000000000000000000010000000000000000001011 YSYTAANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEE 000000000000000000000000000000000001111111000 RADLIAYLKKATNE 00000000000001 >Intersectin 2; SWP:Q9NZM3; PDB:1J3TA GSSGSSGVENLKAQALCSWTAKKDNHLNFSKHDIITVLEQQENWW 999765421000000000000000000000000000000000000 FGEVHGGRGWFPKSYVKIIPGSESGPSSG 00000000000000000000123468999 >High mobility group prote; SWP:P17741; PDB:1J3XA MGKGDPNKPRGKMSSYAFFVQTSREEHKKKHPDSSVNFAEFSKKC 765667643221100000000000000111111110100000000 SERWKTMSAKEKSKFEDMAKSDKARYDREMKN 00000000000000000000000001112234 >Apo-Neocarzinostatin; SWP:P0A3R9; PDB:1J5HA HHHHHHLQGAAPTATVTPSSGLSDGTVVKVAGAGLQAGTAYDVGQ ---------421000000011100000000000000000000000 CAWVDTGVLACNPADFSSVTADANGSASTSLTVRRSFEGFLFDGT 001112100000000000000010000000000000000001221 RWGTVDCTTAACQVGLSDAAGNGPEGVAISFN 11110000000000000012211111000001 >BeKm-1 toxin; SWP:Q9BKB7; PDB:1J5JA RPTDIKCSESYQCFPVCKSRFGKTNGRCVNGFCDCF 000000000000000000000000000000000000 >peptidyl-prolyl cis-trans; SWP:NA; PDB:1J6YA MGSSHHHHHHSSGLVPRGSHMASRDQVKASHILIKHQGSRRKASW -------------------55432100000000000112233322 KDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATRVSDCS 222332222110000000000000000011110000000000100 SAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHII 000000000000111100000000000111100100000000000 KRTA 0012 >HYPOTHETICAL PROTEIN HI07; SWP:P44839; PDB:1J7HA MMTQIIHTEKAPAAIGPYVQAVDLGNLVLTSGQIPVNPATGEVPA 210100000000111110000000000000000000112111000 DIVAQARQSLENVKAIIEKAGLTAADIVKTTVFVKDLNDFAAVNA 000000000000000000000000000000000000000000000 EYERFFKENNHPNFPARSCVEVARLPKDVGLEIEAIAVRK 0000000000000000000000000000000000000001 >MATRIX METALLOPROTEINASE; SWP:P08253; PDB:1J7MA LAAHPPFASWMSTVGGNSGGAPCVFPFTFLGNKYESCTSAGRSDG --------4210000000110000000000000000000000110 KMWCATTANYDDDRKWGFCPDQGWISS 00000000000000000001124---- >Calcium Vector Protein; SWP:P04573; PDB:1J7QA AAPKARALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQ 999999963210000000000000133110000000000000011 TYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSKWVRQDD 00110000000000123433200000000000000001368 >ubiquitin-like protein hP; SWP:Q9UHD9; PDB:1J8CA MAENGESSGPPRPSRGPAAAQGSAAAPAEPKIIKVTVKTPKEKEE 999999999999999999999998754211000000000000000 FAVPENSSVQQFKEAISKRFKSQTDQLVLIFAGKILKDQDTLIQH 000000000000000000000000000000000000000000000 GIHDGLTVHLVIKRDPNSSSVDKYAAALEHHHHHH 0000000000001---------------------- >Lymphotactin; SWP:P47992; PDB:1J8IA VGSEVSDKRTCVSLTTQRLPVSRIKTYTITEGSLRAVIFITKRGL 998755431000000000000000000000000000000000000 KVCADPQATWVRDVVRSMDRKSNTRNNMIQTKPTGTQQSTNTAVT 000000000000000000000011246689999999999999999 LTG 999 >FIBRONECTIN; SWP:P02751; PDB:1J8KA NIDRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIHE 211101000000000000000001111110000000001110000 LFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQST 001111111000000001110000000000111000000000000 AIPA 0123 >TERMINASE SMALL SUBUNIT; SWP:P03707; PDB:1J9IA MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAA 000000000000000000000000000000011122110000000 VIKWYAERDAEIENEKLRREVEE 00000000011123356679999 >DNA POLYMERASE BETA-LIKE; SWP:P42494; PDB:1JAJA MLTLIQGKKIVNHLRSRLAFEYNGQLIKILSKNIVAVGSLRREEK 100000000000000000000000000000000000000000000 MLNDVDLLIIVPEKKLLKHVLPNIRIKGLSFSVKVCGERKCVLFI 000000000000000000000000000000000000000000000 EWEKKTYQLDLFTALAEEKPYAIFHFTGPVSYLIRIRAALKKKNY 000000000000000000000000000000000000000000000 KLNQYGLFKNQTLVPLKITTEKELIKELGFTYRIPKKRL 000000000000000000000000000000000000001 >UBIQUITIN-CONJUGATING ENZ; SWP:P63146; PDB:1JASA MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEG 210000000000000000000000000000000000000000000 TPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLD 000000000000000000000000000000000000000000000 ILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKR 000000000000000000000000000000000000000000000 EYEKRVSAIVEQSWNDS 00000000000000124 >TRANSMEMBRANE GLYCOPROTEI; SWP:P04624; PDB:1JAUA KWASLWNWFNITNWLWYIK 1100000000000000000 >PROTEIN (GUANYLATE CYCLAS; SWP:P51177; PDB:1JBAA MGQQFSWEEAEENGAVGAADAAQLQEWYKKFLEECPSGTLFMHEF -99752233344443222111111111111111212110000000 KRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLR 001111222110000000000001111110000000000001111 GTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEV 221110000000000111110000000000000000011122333 EAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWV 335654321110000000000111121110001101111111211 MKMLQMDLNPSSWISQQRRKSAMF 1100112245-------------- >cochlin; SWP:O43405; PDB:1JBIA TAPIAITCFTRGLDIRKEKADVLCPGGCPLEEFSVYGNIVYASVS 210000000000000000000000000001100000000000000 SICGAAVHRGVISNSGGPVRVYSLPGRENYSSVDANGIQSQMLSR 000000000000000000000000000000000000000000000 WSASFTVTLE 0000000001 >CD3 Epsilon and gamma Ect; SWP:NA; PDB:1JBJA DDAENIEYKVSISGTSVELTCPLDSDENLKWEKNGQELPQKHDKH 643211100000011000000101011100000111001000000 LVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAA 000000011221000001111111100000000013578899999 KKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGLTDKT 999999999999999998653210000011111000000111110 IKWLKDGSIISPLNATKNTWNLGNNAKDPRGTYQCQGAKETSNPL 000000000000110000000001111110000000111100000 QVYYRM 000123 >VENOM BASIC PROTEASE INHI; SWP:P25660; PDB:1JC6A KNRPTFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNAN 432100000000011111000000000000000000001100000 NFKTIDECQRTCAAKYGRSS 00000000000012457999 >conserved protein MTH1692; SWP:O27727; PDB:1JCUA MLIRKITRKNPSPDVLEEAISVMEGGGIVIYPTDTIYGLGVNALD 999865434321110000000000000000000000000000000 EDAVRRLFRVKGRSPHKPVSICVSCVDEIPRFSRPSGDAMELMER 000000000001111100000000000000000000000000000 ILPGPYTVVLERNELIPDVITGGSSRVGIRVPDDEICRRIAARFP 000000000000000110000010000000000000000000000 VTATSANISGKPPSPRLEEIVRDLDAVDLVLDAGDCLDMEPSTVI 000000122110000000000000000000000111111110000 DLTVNPPRVLRRGKGPLDPVLLRGAGDV 0000000000012234456789999999 >HYPOTHETICAL PROTEIN TM09; SWP:Q9X078; PDB:1JDQA GSSHHHHHHSSGLVPRGSHMAKYQVTKTLDVRGEVCPVPDVETKR 999999999999999998764321000000011112111000000 ALQNMKPGEILEVWIDYPMSKERIPETVKKLGHEVLEIEEVGPSE 000000000000000010000000000000000000000000000 WKIYIKVK 00000000 >HYPOTHETICAL 8.6 KDA PROT; SWP:P0AA31; PDB:1JE3A MGSSHHHHHHSSGLVPRGSHMKNIVPDYRLDMVGEPCPYPAVATL 999999999999999999998643211000000012231000000 EAMPQLKKGEILEVVSDCPQSINNIPLDARNHGYTVLDIQQDGPT 000000000000000000111110000000000000000000100 IRYLIQK 0000000 >EMERIN; SWP:P50402; PDB:1JEIA DNYADLSDTELTTLLRRYNIPHGPVVGSTRRLYEKKIFEYETQRR 100011000000000000000000001100000000000001112 RLSPPSSS 33357899 >CALCIUM-BINDING PROTEIN; SWP:P38505; PDB:1JFJA MAEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSI 998986898899986555566457667998887667656765887 DADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDG 899998644454466568887776556545645776899999999 KLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLEFSL 85444545778999999976886799999997777688568879 >TAT PROTEIN; SWP:P04610; PDB:1JFWA MEPVDPRLEPWKHPGSQPKTACTTCYCKKCCFHCQVCFTTKALGI 100000111111000111111111112211111111000000000 SYGRKKRRQRRRPPQGSQTHQVSLSKQPTSQPRGDPTGPKE 00000000011111111110111111121211111111222 >CANDOXIN; SWP:P81783; PDB:1JGKA MKCKICNFDTCRAGELKVCASGEKYCFKESWREARGTRIERGCAA 100001122112110000111110000000001110000000000 TCPKGSVYGLYVLCCTTDDCN 111112211000000111112 >TYROSYL-TRNA SYNTHETASE; SWP:P00952; PDB:1JH3A ALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLVSAGISP 544321111000000000000000000000000000000000000 SKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLEGRFTVIRRGK 000000000000000000000000000000000000000000000 KKYYLIRYALEHHHHHH 000000000-------- >dissimilatory siroheme-su; SWP:Q8ZUX1; PDB:1JI8A MPVKCPGEYQVDGKKVILDEDCFMQNPEDWDEKVAEWLARELEGI 421100000001100000011001000110000000000000000 QKMTEEHWKLVKYLREYWETFGTCPPIKMVTKETGFSLEKIYQLF 000000000000000000111111111111111111000000000 PSGPAHGACKVAGAPKPTGCV 111000000000012235679 >M156R; SWP:Q9Q8E9; PDB:1JJGA MTVIKPSSRPRPRKNKNIKVNTYRTSAMDLSPGSVHEGIVYFKDG 999999999999999999999999876432110000000000011 IFKVRLLGYEGHECILLDYLNYRQDTLDRLKERLVGRVIKTRVVR 000000001100000001123444433211111000000000000 ADGLYVDLRRFF 010000000012 >CREB-BINDING PROTEIN; SWP:P45481; PDB:1JJSA GAHMALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQRTA ----0000000000000113----000000000000000000011 KYVAN 11102 >DEFENSE-RELATED PEPTIDE 1; SWP:P81929; PDB:1JKZA KTCEHLADTYRGVCFTNASCDDHCKNKAHLISGTCHNWKCFCTQN 100000000011000000000000000000000000100000000 C 0 >Tityustoxin alpha-KTx; SWP:P83243; PDB:1JLZA ACGSCRKKCKGSGKCINGRCKCY 00000000000000000000000 >BRCA1-ASSOCIATED RING DOM; SWP:Q99728; PDB:1JM7B MEPDGRGAWAHSRAALDRLEKLLRCSRCTNILREPVCLGGCEHIF 999999985312355332233576699878999999999999999 CSNCVSDCIGTGCPVCYTPAWIQDLKINRQLDSMIQLCSKLRNLL 999999999999999999999998887645434------------ HDNELSDLKEDKPRKSLFNDAGNKKGK --------------------------- >viscotoxin A2; SWP:P32880; PDB:1JMNA KSCCPNTTGRNIYNTCRFGGGSRQVCASLSGCKIISASTCPSDYP 100000000000000000000000000000000001111111100 K 0 >viscotoxin B; SWP:P08943; PDB:1JMPA KSCCPNTTGRNIYNTCRLGGGSRERCASLSGCKIISASTCPSDYP 210000000000000000000000000000000112222122212 K 2 >PEPTIDYL-PROLYL CIS-TRANS; SWP:P0A9L5; PDB:1JNSA AKTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKHSICPSGKR 210000000000000000000000000000000000000000000 GGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKVLY 000000012212100000000001000000000000000000000 RN 12 >potassium large conductan; SWP:Q9Y691; PDB:1JO6A MFIWTSGRTSSSYRHDEKRNIYQKIRDHDLLDKRKTVTALKAGED 999999999976543211100000000000134456899999999 >PROTEIN (ENVZ_ECOLI); SWP:P0AEJ4; PDB:1JOYA MAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLA 976543221111100000000000000000000000000000000 ESINKDIEECNAIIEQFIDYLR 0000000000000000000112 >METHANE MONOOXYGENASE COM; SWP:P22868; PDB:1JQ4A MQRVHTITAVTEDGESLRFECRSDEDVITAALRQNIFLMSSCREG 100000000000000000000000000000000000000001100 GCATCKALCSEGDYDLKGCSVQALPPEEEEEGLVLLCRTYPKTDL 000100000000000000000000000000000000100000000 EIELPYTH 00000001 >10 KDA Anti-Sigma Factor; SWP:P32267; PDB:1JR5A MNKNIDTVREIITVASILIKFSREDIVENRANFIAFLNEIGVTHE 000000000000000000000000000000000000000000000 GRKLNQNSFRKIVSELTQEDKKTLIDEFNEGFEGVYRYLEMYTNK 000000000000000000000000000000000000000000001 >Helicase NS3; SWP:P27958; PDB:1JR6A GSHMGSVTVPHPNIEEVALSTTGEIPFYGKAIPLEVIKGGRHLIF ----21100001000000000000000000000000000000000 CHSKKKCDELAAKLVALGINAVAYYRGLDVSVIPTNGDVVVVATD 000000000000000000000000000000000011000000000 ALMTGFTGDFDSVIDCNTSDGKPQDAVSRTQRRGRTGRGKPGIYR 001111000000000000011000000000000000000000000 FVAPGER 0012245 >SUBGROUP A ROUS SARCOMA V; SWP:P98162; PDB:1JRFA GSSRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCG 653221112221111111111111111000111111100000000 TS 12 >Exendin-4; SWP:P26349; PDB:1JRJA HGEGTFTSDLSKQMEEEAVRLFIEWLKNGGPSSGAPPPS 875421100000000000000000000000111111111 >CONSERVED HYPOTHETICAL PR; SWP:O26734; PDB:1JRMA VITMDCLREVGDDLLVNIEVSPASGKFGIPSYNEWRKRIEVKIHS 000000000000000000000000000000000000000000000 PPQKGKANREIIKEFSETFGRDVEIVSGQKSRQKTIRIQGMGRDL 000000000000000000000000000000000000000000000 FLKLVSEKFGLEIP 00000000000000 >PROBABLE TRANSLATION INIT; SWP:Q57887; PDB:1JT8A MAEQQQEQQIRVRIPRKEENEILGIIEQMLGASRVRVRCLDGKTR 999999865433334433322110111222221111111222110 LGRIPGRLKNRIWVREGDVVIVKPWEVQGDQKCDIIWRYTKTQVE 001111111111222211001111111111100100001344322 WLKRKGYLDELL 211112234556 >Leginsulin; SWP:Q39837; PDB:1JU8A ADCNGACSPFEVPPCRSRDCRCVPIGLFVGFCIHPTG 0000000000000000000000000000000000000 >HUMAN T-CELL LEUKEMIA VIR; SWP:P03353; PDB:1JVR_ HMGQIHGLSPTPIPKAPRGLSTHHWLNFLQAAYRLQPGPSDFDFQ 999999999999876554311000000000000001234432100 QLRRFLKLALKTPIWLNPIDYSLLASLIPKGYPGRVVEIINILVK 000000000000000000000000000011101110000000000 NQVSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVEPTTTQ 113468999999999999999999999999999999999999999 CF 99 >HEMOLYSIN EXPRESSION MODU; SWP:P0ACE3; PDB:1JW2A MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYS 333221000000000000000000000000000000000000000 AADHRLAELTMNKLYDKIPSSVWKFIR 000000000001001110111001112 >Conserved Hypothetical Pr; SWP:O27635; PDB:1JW3A MKGFEFFDVTADAGFWAYGHDLEEVFENAALAMFEVMTDTSLVEA 210000001111000000000000000000000000111121110 AEERRVEITSEDRVSLLYDWLDELLFIHDTEFILFSKFKVKIDEK 000000000000000000000000000000111110000000011 DDGLHLTGTAMGEEIKEGHERRDEVKAVTFHMMEILDEDGLIKAR 220000000000001112111111111111100000000000000 VILDL 00011 >lipocalin Q83; SWP:Q9I9P7; PDB:1JZUA MTVPDRSEIAGKWYVVALASNTEFFLREKDKMKMAMARISFLGED 753211111000000000000112322233211000000000110 ELKVSYAVPKPNGCRKWETTFKKTSDDGEVYYSEEAKKKVEVLDT 000000001244311000000000011110000012110000000 DYKSYAVIYATRVKDGRTLHMMRLYSRSPEVSPAATAIFRKLAGE 111000000000011111000000000001000000000000111 RNYTDEMVAMLPRQEECTVDEV 2221111000123443211235 >gpFII; SWP:P03714; PDB:1K0HA MADFDNLFDAAIARADETIRGYMGTSATITSGEQSGAVIRGVFDD 999999999999999998753110000000000000000000000 PENISYAGQGVRVEGSSPSLFVRTDEVRQLRRGDTLTIGEENFWV 011355555655553100000000000000000000000000000 DRVSPDDGGSCHLWLGRGVPPAVNRRR 001123332101000000135667999 >DNA polymerase alpha cata; SWP:P09884; PDB:1K0PA ICEEPTCRNRTRHLPLQFSRTGPLCPACMKA 1100000000000000011111100110111 >CHEMOTAXIS PROTEIN CHEW; SWP:Q56311; PDB:1K0SA MKTLADALKEFEVLSFEIDEQALAFDVDNIEMVIEKSDITPVPKS 987753210000000000000000000000000001111011112 RHFVEGVINLRGRIIPVVNLAKILGISFDEQKMKSIIVARTKDVE 221000001111000000000000000000000000000000000 VGFLVDRVLGVLRITENQLDLTNVSDKFGKKSKGLVKTDGRLIIY 000000000000000001122332211011101000001100000 LDIDKIIEEITVKEGV 0000000000000134 >CopZ; SWP:O32221; PDB:1K0VA MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVS 100000000000000000000000000000000000000000000 FDADKVSVKDIADAIEDQGYDVAKIEGR 0000000000000000000000000111 >MafG; SWP:O54790; PDB:1K1VA LTDEELVTMSVRELNQHLRGLSKEEIIQLKQRRRTLKNRGY 00000000000000000000000000000000000001111 >S-100 protein, alpha chai; SWP:P35467; PDB:1K2HA GSELETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFL 200000000000000000001210000000000000000000000 DVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTVACNNFFW 000000000000000000000000000000000000000001111 ENS 234 >Epiregulin; SWP:O14944; PDB:1K36A VSITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCEHFF 210000121111000000000000000000000100111000111 L 1 >Xylanase; SWP:P96988; PDB:1K42A MLVANINGGFESTPAGVVTDLAEGVEGWDLNVGSSVTNPPVFEVL 110000000000000000000000000000000000000000000 ETSDAPEGNKVLAVTVNGVGNNPWDIEATAFPVNVRPGVTYTYTI 000000000000000000000000000000000000000000000 WARAEQDGAVVSFTVGNQSFQEYGRLHEQQITTEWQPFTFEFTVS 000000000000000000010000000000000000000000000 DQETVIRAPIHFGYAANVGNTIYIDGLAIASQP 000000000000000000000000000000113 >TAT protein; SWP:P04613; PDB:1K5KA MDPVDPNLEPWNHPGSQPRTPCNKCYCKKCCYHCQMCFITKGLGI 000000000000000000000000000000000000000000000 SYGRKKRRQRRRPPQGNQAHQDPLPEQPSSQHRGDHPTGPKE 000000000000000000000000000000000000000000 >alpha-conotoxin EI; SWP:P50982; PDB:1K64A RDCCYHPTCNMSNPQIC --000000000000001 >PROBABLE TRANSLATION INIT; SWP:Q57562; PDB:1K81A VICRECGKPDTKIIKEGRVHLLKCMACGAIRPIRMI 532321211000000000000000000000000124 >CHITINASE A1; SWP:P20533; PDB:1K85A HMAPTAPTNLASTAQTTSSITLSWTASTDNVGVTGYDVYNGTALA 310000000000000000000000000011000000000010000 TTVTGTTATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 0000000000000000000000000000000000000000000 >PROBABLE TRANSLATION INIT; SWP:Q57562; PDB:1K8BA EILIEGNRTIIRNFRELAKAVNRDEEFFAKYLLKETGSAGNLEGG 000000000000000000000000000000000000000000000 RLILQRR 0000002 >Small protein B; SWP:O66640; PDB:1K8HA GKSDKIIPIAENKEAKAKYDILETYEAGIVLKGSEVKSLREKGTV 764210000000000011000000000001111100000001122 SFKDSFVRIENGEAWLYNLYIAPYKHATIENHDPLRKRKLLLHKR 321000000000000000111112333444321111000000000 EIMRLYGKVQEKGYTIIPLKLYWKNNKVKVLIALAKGKKLYDR 0000000000000000000000000000000000001245668 >NEUROPEPTIDE F; SWP:P41967; PDB:1K8VA PDKDFIVNPSDLVLDNKAALRDYLRQINEYFAIIGRPRF 999999999999753211000000000000000002468 >Upstream binding factor 1; SWP:P17480; PDB:1K99A MKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKIL 999986556532110000000000000000000110100000000 SKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAK 000000000000000000000000001122223456899999999 KLEHHHHHH 9-------- >PHOSPHOCARRIER PROTEIN HP; SWP:P0A0E3; PDB:1KA5A MEQNSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLK 000000000000000000000000000000000000000000000 SIMGVMSLGVGKDAEITIYADGSDESDAIQAISDVLSKEGLTK 0000000000000000000000000000000000000000000 >Phage-Derived Peptide Ant; SWP:NA; PDB:1KATX GGNECDIARMWEWECFERL ----------421111122 >e109 zeta peptide; SWP:NA; PDB:1KCNA ALCPAVCYVGGKALCPDVCYV 210001001223110000000 >GOMESIN; SWP:P82358; PDB:1KFPA CRRLCYKQRCVTYCRGR 00000000000000012 >Excinuclease ABC subunit; SWP:P0A8G0; PDB:1KFTA MGSSHHHHHHSSGLVPRGSHMNTSSLETIEGVGPKRRQMLLKYMG ----------------------99666433321100000000000 GLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH 000000000000000000010000000000012 >Necrosis Inducing Protein; SWP:Q02039; PDB:1KG1A DRCRYTLCCDGALKAVSACLHESESCLVPGDCCRGKSRLTLCSYG 310000000001110000000010000000000000000000001 EGGNGFQCPTGYRQC 233311100000000 >SERINE PROTEASE INHIBITOR; SWP:O46162; PDB:1KGMA EVTCEPGTTFKDKCNTCRCGSDGKSAACTLKACPQ 21111110000000000011111111101112223 >Beta-defensin 3; SWP:P81534; PDB:1KJ6A GIINTLQKYYCRVRGGRCAVLSCLPKEEQIGKCSTRGRKCCRRKK 974210000000000000000000000000000111000000012 >integrase; SWP:P03700; PDB:1KJKA MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAI ----------10000000000000000001100000000000000 TEAIQANIELFSGHKHKPL 00000000000124----- >ribosome-binding factor A; SWP:P0A7G2; PDB:1KKGA MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSR 210000000000000000000000000000000000000000000 DLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLR 000000000000000000000000000000000000000000000 IVPELTFFYDNSLVEGMR 000000000000000001 >Transcription regulatory; SWP:P09547; PDB:1KKXA MRGSGSHHHHHHGSNNKQYELFMKSLIENCKKRNMPLQSIPEIGN --------------2111000000000000000001110000111 RKINLFYLYMLVQKFGGADQVTRTQQWSMVAQRLQISDYQQLESI 110000000000000000000000000000000000000000000 YFRILLPYERHMISQEGIKETQAKRILQPSLIS 00000000000112346888799999------- >TRANSFORMING GROWTH FACTO; SWP:P01137; PDB:1KLAA ALDTNYCFSSTEKNCCVRQLYIDFRKDLGWKWIHEPKGYHANFCL 000000011211100000000000000000000000000000000 GPCPYIWSLDTQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVY 000011010100000000000011110000000000000000000 YVGRKPKVEQLSNMIVRSCKCS 0000000000000000000000 >MEROMYCOLATE EXTENSION AC; SWP:P0A4W6; PDB:1KLPA MPVTQEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMV 310000000000000000000000000000000000000000000 EIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLEEENPEAAQA 000000000000000000000000000000000000111111111 LRAKIESENPDAVANVQARLEAESK 1232223335546789999999999 >ZINC FINGER Y-CHROMOSOMAL; SWP:P08048; PDB:1KLRA KTYQCQYCEFRSADSSNLKTHIKTKHSKEK 210000000000010000000000001357 >DIPETALIN; SWP:O96790; PDB:1KMAA FQGNPCECPRALHRVCGSDGNTYSNPCMLTCAKHEGNPDLVQVHE 010000000000000000000000000000000000000000000 GPCDEHDHDF 0001244679 >Vacuolar morphogenesis pr; SWP:P32912; PDB:1KMDA KMSEKLRIKVDDVKINPKYVLYGVSTPNKRLYKRYSEFWKLKTRL 432100000000000000000000000000000000000000000 ERDVGSTIPYDFPEKPGVLDRRWQRRYDDPEMIDERRIGLERFLN 000000000000011223222221100000000000000000000 ELYNDRFDSRWRDTKIAQDFLQLSKPN 000001000000000000000001245 >vascular endothelial grow; SWP:P15692; PDB:1KMXA ARQENPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELNE 976431101112221100000110000000000000000000000 RTCRCDKPRR 0000001135 >Prohormone Convertase 1; SWP:P63239; PDB:1KN6A MHHHHHHKRQFVNEWAAEIPGGQEAASAIAEELGYDLLGQIGSLE ----------21100000001000000000000000000111110 NHYLFKHKSHPRRSRRSALHITKRLSDDDRVTWAEQQYEKERSKR 00000001222212222100000000000000000001------- >VOLTAGE-GATED POTASSIUM C; SWP:P15385; PDB:1KN7A GSTMEVAMVSAESSGCNSHMPYGYAAQARARERERLAHSRAAAAA ---999999999999999999876543211122233344455532 AVAAATAAVEGTGGSGGGPHHHHQTRGAYSSHD 322235789999999999999999999999999 >Voltage-dependent Channel; SWP:P60590; PDB:1KOZA DCVRFWGKCSQTSDCCPHLACKSKWPRNICVWDGSV 000000000111100000000011100000000123 >HEPATOCYTE NUCLEAR FACTOR; SWP:Q63244; PDB:1KQ8A PKPPYSYIALITMAIRDSAGGRLTLAEINEYLMGKFPFFRGSYTG ------000000000000000000000000000000000011110 WRNSVRHNLSLNDCFVKVLRDPSRPWGKDNYWMLNPNSEYTFADG 000000000000000000111223444200000000--------- VFRRRRYRLS ---------- >ACTX-Hi:OB4219; SWP:P60272; PDB:1KQHA KCLAEAADCSPWSGDSCCKPYLCSCIFFYPCSCRPKGW 00000000012211000000000000000000000012 >TRANSFORMING GROWTH FACTO; SWP:Q90999; PDB:1KS6A QLPRLCKFCDVKATTCSNQDQCTSNCNITSICEKNNEVCAAVWRR 321000000000000000000000000000001111000000000 NDENVTLETICHDPQKRLYGHMLDDSSSEQCVMKEKKDDGGLMFM 000000000000000000000001000000000000000000000 CSCTGEECNDVLIFSAI 00000000000000001 >LATENT TRANSFORMING GROWT; SWP:P22064; PDB:1KSQA SADQPKEEKKECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGD 643211100000001111000101110000000000001000000 NCEIFPCPVLGTAEFTEMCPKGKGFVPAGE 000000000000000000001001112224 >GELATION FACTOR; SWP:P13466; PDB:1KSR_ ADPEKSYAEGPGLDGGECFQPSKFKIHAVDPDGVHRTDGGDGFVV 100000000000000000000000000000000000000000000 TIEGPAPVDPVMVDNGDGTYDVEFEPKEAGDYVINLTLDGDNVNG 000000000000000000000000000000000000000000000 FPKTVTVKPA 0000000010 >KALIOTOXIN; SWP:P24662; PDB:1KTX_ GVEINVKCSGSPQCLKPCKDAGMRFGKCMNRKCHCTP 1000110000000000000000000000000000000 >moricin; SWP:P82818; PDB:1KV4A AKIPIKAIKTVGKAVGKGLRAINIASTANDVFNFLKPKKRKA 643221110000001111111111000000111123467799 >Copper-transporting ATPas; SWP:Q04656; PDB:1KVIA MDPSMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEE 643211000000000001100000000000000000000000000 KNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNPD 0000000000110100000000000000001122 >SRP19; SWP:O29010; PDB:1KVNA MKESVVWTVNLDSKKSRAEGRRIPRRFAVPNVKLHELVEASKELG 100000000000010111011101011000010000000000000 LKFRAEEKKYPKSWWEEGGRVVVEKRGTKTKLMIELARKIAEIRE 000000013455555321000000111100000000000000000 QKREQKKDKKKKKK 00001333234568 >RC-RNase4; SWP:Q9DFY6; PDB:1KVZA MQDWATFKKKHLTDTWDVDCDNLMPTSLFDCKDKNTFIYSLPGPV 100000000000000000000000000000000000000000000 KALCRGVIFSADVLSNSEFYLAECNVKPRKPCKYKLKKSSNRICI 000000000000000000000000000000000000000000000 RCEHELPVHFAGVGICP 00000000000000011 >CELL DIVISION CONTROL PRO; SWP:P32797; PDB:1KXLA MRMSKMARKDPTIEFCQLGLDTFETKYITMFGMLVSCSFDKPAFI ----98531100011101101111100000000000001111100 SFVFSDFTKNDIVQNYLYDRYLIDYENKLELNEGFKAIMYKNQFE 000001111111111111111101122111100000000000000 TFDSKLRKIFNNGLRDLQNGRDENLSQYGIVCKMNIKVKMYNGKL 000000000000000001222321100100000000000010000 NAIVRECEPVPHSQISSIASPSQCEHLRLFYQRAFKRIGESAISR 000000000011100110111100000000000001000000000 YFEEYRRFFPIHRNGSHLA 00001112222-------- >Vpr PROTEIN; SWP:P12520; PDB:1KZSA FPRIWLHNLGQHIYETYG 110000000000000001 >INTESTINAL FATTY ACID-BIN; SWP:P12104; PDB:1KZWA AFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGN 210000000000000000000000000000010000000000010 KFTVKESSAFRNIEVVFELGVTFNYNLADGTELRGTWSLEGNKLI 000000000000000000000000001111000000000110000 GKFKRTDNGNELNTVREIIGDELVQTYVYEGVEAKRIFKKD 00000000000000000000000000000100000000001 >trigger factor; SWP:P0A850; PDB:1L1PA GSHMQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLA 975311100000000000000000000000000000000000000 MGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKF 000000000000000000000000000000000000000000000 AINLKKVEERELPELT 0000000000012346 >TC5b; SWP:NA; PDB:1L2YA NLYIQWLKDGGPSSGRPPPS 10000000000000000001 >Integrin beta-2:CYSTEINE-; SWP:P05107; PDB:1L3YA ECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQA 31121111112111000000000000000000001110001 >NEUROPHYSIN 1; SWP:P01175; PDB:1L5CA AVLDLDVRTCLPCGPGGKGRCFGPSICCGDELGCFVGTAEALRCQ 655578643210000000000000000000000000000000001 EENYLPSPCQSGQKPCGSGGRCAAAGICCSPDGCEEDPACDPEAA 112445554332100000000000000000000000000000000 FS 00 >DNA LIGASE; SWP:P26996; PDB:1L7BA MEKGGEALKGLTFVITGELSRPREEVKALLRRLGAKVTDSVSRKT 875421000000000000000000000000000000000000000 SYLVVGENPGSKLEKARALGVPTLTEEELYRLLEARTGKKAEELV 000000000000000000000000000000000000000001234 GS 57 >HYPOTHETICAL PROTEIN ZK65; SWP:P34661; PDB:1L7YA MSGGTAATTAGSKVTFKITLTSDPKLPFKVLSVPESTPFTAVLKF 999999997530000000000112321000000000000000000 AAEEFKVPAATSAIITNDGVGVNPAQPAGNIFLKHGSELRLIPRD 000000000000000000000000000000000000000000013 RVGH 5799 >upstream binding factor 1; SWP:P17480; PDB:1L8YA MGKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNM -43321000000000000000000000000000000000000000 EKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKLEHHHHH 0000000000000000000001111223455898899999----- H - >SGTx1; SWP:P56855; PDB:1LA4A TCRYLFGGCKTTADCCKHLACRSDGKYCAWDGTF 1000000000000000000000000000000135 >DIHYDROLIPOAMIDE ACETYLTR; SWP:P11961; PDB:1LAB_ AFEFKLPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVV 100000100011100000000001120000100010000012110 EIPSPVKGKVLEILVPEGTVATVGQTLITLDAPGY 00000000000000000000000000000001112 >motilin; SWP:P12872; PDB:1LBJA FVPIFTYGELQRMQEKERNKGQ 2111100000000000000001 >PANCREATIC TRYPSIN INHIBI; SWP:P00974; PDB:1LD6A RPDFCLEPPYAGACRAAAARYFYNAKAGLCQTFAYGACAAKRNNF 000000000112212221000000000000000111111110000 KSAEDCLRTCGGA 0000000000023 >Prion-like protein; SWP:Q9UKY0; PDB:1LG4A VQTRGIKHRIKWNRKALPSTAQITEAQVAENRPGAFIKQGRKLDI ----------------------------00000000000000000 DFGAEGNRYYEANYWQFPDGIHYNGCSEANVTKEAFVTGCINATQ 001000000000000000000011222211100000000000000 AANQGEFQKPDNKLHQQVLWRLVQELCSLKHCEFWLERG 0000000111110000000000000000111111122-- >LQ2; SWP:P45628; PDB:1LIR_ FTQESCTASNQCWSICKRLHNTNRGKCMNKKCRCYS 000000000000000000000000000000000001 >Calmodulin; SWP:P06787; PDB:1LKJA SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSE 999899976764554466679999765666545545776778899 AEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFK 987886798899999876656544544565678875576579889 VFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDGSGEI 999999999765775797799999999999899879988999776 NIQQFAALLSK 66775577679 >INSULIN; SWP:P01308; PDB:1LKQA GGGEQCCTSICSLYQLENYCN ------8-5------------ >PAS Kinase; SWP:Q96RG2; PDB:1LL8A GAMDPEFNKAIFTVDAKTTEILVANDKACGLLGYSSQDLIGQKLT 765322210000000000000000000000000000000000000 QFFLRSDSDVVEALSEEHMEADGHAAVVFGTVVDIISRSGEKIPV 000000000000001111123332211000000000000000000 SVWMKRMRQERRLCCVVVLEPVER 000000110000000000000013 >fibrillin 1; SWP:P35555; PDB:1LMJA TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMD 211111111111111100001111000001100011222111100 IDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 00000111100111000000000001112221111111111 >Psalmotoxin 1; SWP:P60514; PDB:1LMMA EDCIPKWKGCVNRHGDCCEGLECWKRRRSFEVCVPKTPKT 3211110001112111100000000011100000001245 >TOXIN ADO1; SWP:P58608; PDB:1LMRA ADDDCLPRGSKCLGENKQCCKGTTCMFYANRCVGV 86421000000000111000000000000000002 >3-methyladenine DNA glyco; SWP:P05100; PDB:1LMZA MERCGWVSQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLS 221122111110000001110000000000000000000000000 WITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRG 000000000000000011000000000000000000111101000 KIQAIIGNARAYLQMEQNGEPFADFVWSFVNHQPQMTQATTLSEI 000000000000000001100000000000000000111111110 PTSTPASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGCC 000000000000000000000000000000000000000111212 CYPGNKP 2123345 >CYCLIC 3',5'-AMP SPECIFIC; SWP:P54748; PDB:1LOI_ MPLVDFFCETCSKPWLVGWWDQFKR 4322221233465575454221355 >Alpha3W; SWP:NA; PDB:1LQ7A GSRVKALEEKVKALEEKVKALGGGGRIEELKKKWEELKKKIEELG 210000000000000000000000000000000000000000000 GGGEVKKVEEEVKKLEEEIKKL 1100000000000000000000 >dna-binding protein h-ns; SWP:P0ACF8; PDB:1LR1A GSHMSEALKILNNIRTLRAQARESTLETLEEMLEKLEVVVNERRE ----00000000000000000000000000000000000000000 EESAAAAEVEERTRKL 0000000012443446 >LSIII; SWP:P01379; PDB:1LSI_ RECYLNPHDTQTCPSGQEICYVKSWCNAWCSSRGKVLEFGCAATC 110111111110011100000000001211111100000000000 PSVNTGTEIKCCSADKCNTYP 011110000000000000124 >venom toxin peptide MTx4; SWP:Q7YT39; PDB:1LU8A GCLEFWWKCNPNDDKCCRPKLKCSKLFKLCNFSF 1000000000010000000000000000000024 >Tyrosine-protein kinase I; SWP:Q03526; PDB:1LUIA NNLETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVS 210000000000000000000000000000000000100000000 VFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQY 000010111110000000000012200000000000000000000 HQYNGGGLVTRLRYPVCG 000011100000000001 >HYPOTHETICAL PROTEIN YacG; SWP:P0A8H8; PDB:1LV3A GSHMSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAA ---642100000000000000001010000000000000000024 EEKRIPSSGDLSESDDWSEEPKQ 57999999999999999999999 >Neural Cell Adhesion Mole; SWP:P13596; PDB:1LWRA AGPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVKYRALAS 100000000000000000000000000000000000000000000 EWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFV 000000000000000000000000000000000000000000000 FRTSAQ 000000 >CAP18; SWP:P25230; PDB:1LYP_ GLRKRLRKFRNKIKEKLKKIGQKIQGLLPKLA 00000000000000000000000000000000 >metallothionein MT_nc; SWP:P62339; PDB:1M0GA SCCPCCPSGCTKCASGCVCKGKTCDTSCCQ 100000000000000100001000000000 >metallothionein MT_nc; SWP:P62339; PDB:1M0JA DPCECSKSGTCNCGGSCTCTNCSCKSCK 5311010134556887653332457766 >Toxin BmTX3; SWP:Q9NBG9; PDB:1M2SA FGLIDVKCFASSECWTACKKVTGSGQGKCQNNQCRCY 2000000000000000000000000000000000000 >Placental calcium-binding; SWP:P26447; PDB:1M31A MACPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSF 310000000000000000012122110000000000000000000 LGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIAMMCNEFF 011121000000000000112110000000000000000000112 EGFPDKQPRKK 22222123567 >Monocytic leukemia zinc f; SWP:Q92794; PDB:1M36A GSRLPKLYLCEFCLKYMKSRTILQQHMKKCGWF 875321000010000000000000000000113 >Caltractin, isoform 1; SWP:P41208; PDB:1M39A MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKR --1110111112233222211000000000011110000000000 VAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY 0000111110000000000000111100000000012------- >DUAL SPECIFICITY PROTEIN; SWP:Q05923; PDB:1M3GA QGGPVEILPYLFLGSCSHSSDLQGLQACGITAVLNVSASCPNHFE 000000000000000000000000000000000000000000000 GLFRYKSIPVEDNQMVEISAWFQEAIGFIDWVKNSGGRVLVHSQA 000000000000000000000000000000000000000000000 GISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVISPNFSFMGQL 000000000000000000000000000000000000000000000 LQFETQVLCH 0000000000 >fusion of the LIM interac; SWP:P70662; PDB:1M3VA GSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDI 986433222223333332211112211111211111111121222 GTSSYTKSGMILCRNDYIRLFGNSGAGGSGGHMGSGGDVMVVGEP 221111111100111111112244567898887655789999999 TLMGGEFGDEDERLITRLENTQFDAANGIDDE 99976533342211112233445666779999 >Hepcidin; SWP:P81172; PDB:1M4EA ICIFCCGCCHRSKCGMCCKT 00000001111000000012 >RC-RNase2 ribonuclease; SWP:Q9DFY8; PDB:1M58A MQNWETFQKKHLTDTRDVKCDAEMKKALFDCKQKNTFIYARPGRV 210000000000000000000000010000000000000000000 QALCKNIIVSKNVLSTDEFYLSDCNRIKLPCHYKLKKSSNTICIT 000000000000000000000000000000000000000000000 CENKLPVHFVAVEECP 0000000000000011 >AMPA receptor interacting; SWP:P97879; PDB:1M5ZA SPTPVELHKVTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPG 222000000000000111100000000000000000000000000 DLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN 000000000000000000000000000000000000000000000 P 1 >Silencer of Death Domains; SWP:O95429; PDB:1M7KA NQDQSSSLPEECVPSDESTPPSIKKIIHVLEKVQYLEQEVEEFVG ------------------222000000000000000000000000 KKTDKAYWLLEEMLTKELLELDSVETGGQDSVRQARKEAVCKIQA 000000000000000000000000111100000000000000000 ILEKLEKKG 000000001 >Chimera of Human and E. c; SWP:P10599; PDB:1M7TA MVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSL 100000000000000000000000000000000000000000000 SEKYSNVIFLEVDVDDAQDVAPKYGIRGIPTLLLFKNGEVAATKV 000000000000000000000000000000000000000000000 GALSKGQLKEFLDANLV 00000000000000001 >Protein YNR032c-a; SWP:Q6Q546; PDB:1M94A MGSSHHHHHHSSGLVPRGSHMIEVVVNDRLGKKVRVKCLAEDSVG --------------------0000000012210000000000000 DFKKVLSLQIGTQPNKIVLQKGGSVLKDHISLEDYEVHDQTNLEL 000000000000000000000100000000000000000000000 YYL 001 >Outer Arm Dynein Light Ch; SWP:Q9XHH2; PDB:1M9LA HMAKATTIKDAIRIFEERKSVVATEAEKVELHGMIPPIEKMDATL -00000000000000000000000000000000000000000000 STLKACKHLALSTNNIEKISSLSGMENLRILSLGRNLIKKIENLD 000000000000000000000000000000000000000000000 AVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKITNWGEID 000000000000000000000000000000000000000000000 KLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKL 000000000000010000000000000000000000000000000 DGMPVDVDEREQANVARGG 0000000000000000001 >huwentoxin-iv; SWP:P83303; PDB:1MB6A ECLEIFKACNPSNDQCCKSSKLVCSRKTRWCKYQI 10000000000000000000000000000000001 >Segment polarity protein; SWP:P51141; PDB:1MC7A TVTLNMERHHFLGISIVGQSNDRGDGGIYIGSIMKGGAVAADGRI 000012111111000000012233210000000001100010100 EPGDMLLQVNDVNFENMSNDDAVRVLREIVSQTGPISLTVAKAWD 000000000000000000000000000000000000000000113 PTPRS 44678 >PROTEIN DISULFIDE ISOMERA; SWP:P07237; PDB:1MEK_ DAPEEEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPE 532101100000000000000000000000000001100000000 YAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRN 000000111111100000000000000000000110000000000 GDTASPKEYTAGREADDIVNWLKKRTGPAA 011100000011000000000000112468 >FIBRONECTIN; SWP:P11276; PDB:1MFN_ GLDSPTGFDSSDITANSFTVHWVAPRAPITGYIIRHHAEHSVGRP 776656655444333332334567798876532223457889886 RQDRVPPSRNSITLTNLNPGTEYVVSIIAVNGREESPPLIGQQAT 554456676553334444444433222334666554444444333 VSDIPRDLEVIASTPTSLLISWEPPAVSVRYYRITYGETGGNSPV 333333333343334332223344344433221112345677654 QEFTVPGSKSTATINNIKPGADYTITLYAVTGRGDSPASSKPVSI 332223444332223434444432211222345675443333222 NYKT 3333 >Parkin; SWP:NA; PDB:1MG8A MGMIVFVRFNSSYGFPVEVDSDTSILQLKEVVAKRQGVPADQLRV 110000000111000000000000000000000000000000000 IFAGKELPNHLTVQNCDLEQQSIVHIVQRPRRR 000000000000000000000000000001234 >HUMAN MELANOMA GROWTH STI; SWP:P09341; PDB:1MGSA ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLK 975421000000000000000000000000000000000000000 NGRKACLNPASPIVKKIIEKMLNSDKSN 0000000000000000000000001356 >MACROPHAGE INFLAMMATORY P; SWP:P10889; PDB:1MI2A AVVASELRCQCLKTLPRVDFKNIQSLSVTPPGPHCAQTEVIATLK 998753321100000000000000000000011111000000000 GGQKVCLDPEAPLVQKIIQKILNKGKAN 0000000000000000000000000124 >Fusion protein consisting; SWP:NA; PDB:1MKEA DLPPPEPYVQTTKSYPSKLARNESRGSGSGSLFSFLGKKCVTMSS 100000001121100000112367999999999876431000000 AVVQLYAADRNCMWSKKCSGVACLVKDNPQRSYFLRIFDIKDGKL 000000000110000000000000000122100000000000000 LWEQELYNNFVYNSPRGYFHTFAGDTCQVALNFANEEEAKKFRKA 000000010000000000000000100000000000000000000 VTDLLGRRQRKSEKRRD 000000013-------- >Termicin; SWP:P82321; PDB:1MM0A ACNFQSCWATCQAQHSIYFRRAFCDRSQCKCVFVRG 100000000000000000000000000000000001 >Mi2-beta(Chromodomain hel; SWP:Q14839; PDB:1MM3A GPLGSDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLRPALYEVPD 998754321100001011110000100000000111111111112 GEWQCPRCTCPALKGK 1111112235789999 >MNT REPRESSOR; SWP:P03049; PDB:1MNTA ARDDPHFNFRMPMEVREKLKFRAEANGRSMNSELLQIVQDALSKP 531111010000000000000000010000000000000011123 SPVTGYRNDAERLADEQSELVKKMVFDTLKD 444454432221111221333---------- >Sodium/Potassium-transpor; SWP:P06685; PDB:1MO7A QNPMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWFALSRIAGL 532100000000000111234456554433321000000000000 CNRAVFQANQENLPILKRAVAGDASESALLKCIEVCCGSVMEMRE 001000112221110000000111100000000001110000000 KYTKIVEIPFNSTNKYQLSIHKNPNASEPKHLLVMKGAPERILDR 000000000123321000000000111000000000000000000 CSSILLHGKEQPLDEELKDAFQNAYLELGGLGERVLGFCHLLLPD 000000000000000000000000000011222100000000000 EQFPEGFQFDTDEVNFPVDNLCFVGLISMIDPP 100000000001000000000000100000111 >Glycine Receptor alpha-1; SWP:P23415; PDB:1MOTA APARVGLGITTVLTMTTQSSGSRASLPK 4210000000000001246899999999 >Ser/Arg-related nuclear m; SWP:Q8IYB3; PDB:1MP1A SHMQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVI 211000000000000000000000000000000000000000000 EFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQ 000000000000000000000000000000000000000000000 ENIAGIPSAFLELKKEEIKQR 000000000000012457899 >Nicotiana alata plant def; SWP:Q8GTM0; PDB:1MR4A RECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILRRCLCTK 100000000011000000000000000000000001110000000 PC 01 >neurotoxin; SWP:Q9YGJ0; PDB:1MR6A MQCKTCSFYTCPNSETCPDGKNICVKRSWTAVRGDGPKREIRREC 100111111212211001110000000001124454311000000 AATCPPSKLGLTVFCCTTDNCNH 00022333421000000111111 >DNA-binding protein SMUBP; SWP:NA; PDB:1MSZA MGSLNGGSPEGVESQDGVDHFRAMIVEFMASKKMQLEFPPSLNSH ----------------11000000000000000000000000000 DRLRVHQIAEEHGLRHDSSGEGKRRFITVSKRAGSHHHHHH 000000000000000000000100000000000-------- >alpha-conotoxin GID; SWP:NA; PDB:1MTQA IRDCCSNPACRVNNHVC ---00000000000--- >MARGATOXIN; SWP:NA; PDB:1MTX_ TIINVKCTSPKQCLPPCKAQFGQSAGAKCMNGKCKCYPH 310000000000000000000000000000100000000 >NUCLEOSIDE TRIPHOSPHATE P; SWP:NA; PDB:1MUT_ MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGET 221100000000111100000123444542110001110012211 PEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWLVERW 100000000111111111100000000111111110000000000 EGEPWGKEGQPGEWMSLVGLNADDFPPANEPVIAKLKRL 101001112210000112211000001100000000011 >Myc box dependent interac; SWP:NA; PDB:1MV3A DGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPP 999999999999999999999999987654332111000000001 KHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQP 133556789999999999999999999999999999999999999 AAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAGRL 999999999999999999999999999999999877765431000 DLPPGFMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDE 000000000000000000000000000000000000000000000 GWLMGVKESDWNQHKKLEKCRGVFPENFTERVP 000000000000000000000000000000000 >Bowman-Birk type protease; SWP:NA; PDB:1MVZA TKSTTTACCDFCPCTRSIPPQCQCTDVREKCHSACKSCLCTRSFP 864311000000011111111100000000000000000000000 PQCRCYDITDFCYPSCS 00000000111111111 >ZntA; SWP:NA; PDB:1MWYA SGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVV 100000000000010000000000000000000000000000000 DADNDIRAQVESALQKAGYSLRDEQAAE 0000000000000000000000000012 >DROSOMYCIN; SWP:NA; PDB:1MYN_ DCLSGRYKGPCAVWDNETCRRVCKEEGRSSGHCSPSLKCWCEGC 00000000000000000000000000000000000100000000 >MYOTROPHIN; SWP:NA; PDB:1MYO_ MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADC 210000000000000000000000000000000000000000000 GQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSK 000000000000000000000000000000000000000000000 GADKTVKGPDGLTALEATDNQAIKALLQ 0000000000000000000000000001 >KINASE ASSOCIATED PROTEIN; SWP:NA; PDB:1MZKA GPLGSSWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSPSDLA --2110000000000000000000000000000000001100000 LKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHSISHPDL 000000000000000011000000000010010000000001223 GSRKWGNPVELASDDIITLGTTTKVYVRISSQNEFQIPFKIGVAS 2110000000000000000000000000000012----------- DPMA ---- >Cyanovirin-N; SWP:NA; PDB:1N02A GLGKFIETCRNTQLAGSSELAAECKTRAQQFVSTKINLDDHIANI -10000000000000000000000000000000000000000000 DGTLKWQPSNFSQTCYNSAIQGSVLTSTCERTNGGYNTSSIDLNS 000000000000000000000000000000000000000000000 VIENVDGSLKYE 000000000001 >Hepatoma-derived growth f; SWP:NA; PDB:1N27A GSSGSSGEYKAGDLVFAKMKGYPHWPARIDELPEGAVKPPANKYP 776543100000000000000000000000001221110010000 IFFFGTHETAFLGPKDLFPYKEYKDKFGKSNKRKGFNEGLWEIEN 000000000000000000000000000000000000000000000 SGPSSG 013445 >Protein yfiA; SWP:NA; PDB:1N3GA MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKEP 110000010000000000000000000000010000000000000 QGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQH 000000000000000000000000000000000000000000011 KGEARRAATSVKDANFVEEVEEE 23568999999999999999999 >SHC Transforming protein; SWP:NA; PDB:1N3HA MNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKV 000000000000000000000000000000000000000000000 MGPGVSYLVRYMGCVEVLQSMRALDFNTRTQVTREAISLVCEAVP 000000000000000000000000000000000000000000000 GAKGATRRRKPCSRPLSSILGRSNLKFAGMPITLTVSTSSLNLMA 000000000000000000000000000000000000000000000 ADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHIL 000000000000000000000000000000000000000000000 ECPEGLAQDVISTIGQAFELRFKQYLR 000000000000000000000000000 >Astrocytic phosphoprotein; SWP:NA; PDB:1N3KA MAEYGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAW 000000000000000000000000000000000000000000000 FSFLESHNKLDKDNLSYIEHIFEISRRPDLLTMVVDYRTRVLKIS 000000000000000000000000000000000000000000000 EEDELDTKLTRIPSAKKYKDIIRQPSEEEIIKLAPPPKKA 0112233556778876778999888899999999999999 >Auxilin; SWP:Q27974; PDB:1N4CA GPLGSPEFSMPHSSPQNRPNYNVSFSSMPGGQNERGKAAANLEGK 999999999999999999999999999999999999999999999 QKAADFEDLLSGQGFNAHKDKKGPRTIAEMRKEEMAKEMDPEKLK 999999999999999999999876432222111111111000000 ILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVK 000000000000000000000000000000000000000000000 KVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKP 000000000000000010000000000000000000000011112 LY 12 >floral defensin-like prot; SWP:Q8H6Q1; PDB:1N4NA ATCKAECPTWDSVCINKKPCVACCKKAKFSDGHCSKILRRCLCTK 000000000010000000000000000000000000000000000 EC 00 >Interferon-alpha/beta rec; SWP:P48551; PDB:1N6UA SYDSPDYTDESCTFKISLRNFRSILSWELKNHSIVPTHYTLLYTI 999886542210000000000000000000111110000000000 MSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGNT 000000000010000000000000000000000000000000000 TLFSCSHNFWLAIDMSFEPPEFEIVGFTNHINVMVKFPSIVEEEL 000000000000000000000000000010000000000001111 QFDLSLVIEEQSEGIVKKHKPEIKGNMSGNFTYIIDKLIPNTNYC 111000000000000000000001000000000000011000000 VSVYLEHSDEQAVIKSPLKCTLLPPGQESEFS 00000000000000000000000011245789 >Hypothetical 12.3 kDa pro; SWP:Q03759; PDB:1N6ZA MSKSNTYRMLVLLEDDTKINKEDEKFLKGKPGKMHEFVDELILPF 122100000000000012346676798975331000000000000 NVDELDELNTWFDKFDAEICIPNEGHIKYEISSDGLIVLMLDKEI 000000000000000000000000000000000000000000000 EEVVEKVKKFVEENN 000000000000000 >Potassium channel blockin; SWP:P58498; PDB:1N8MA IEAIRCGGSRDCYRPCQKRTGCPNAKCINKTCKCYGCS 21000000000000000000000000000000000012 >orf, hypothetical protein; SWP:NA; PDB:1N91A MDGVMSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAP 643100000000000000000000000000000000000000000 PVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQ 000000000000000000000000000000000000000000000 IPPEVAALINLEHHHHHH 000000000013235699 >Prolactin; SWP:P01236; PDB:1N9DA LPICPGGAARCQVTLRDLFDRAVVLSHYIHNLSSEMFSEFDKRYT 221111000000000000000000000000000000000000000 HGRGFITKAINSCHTSSLATPEDKEQAQQMNQKDFLSLIVSILRS 000000000011111222210000000000000000000000000 WNEPLYHLVTEVRGMQEAPEAILSKAVEIEEQTKRLLEGMELIVS 000000000000000000000000000000000000000000000 QVHPETKENEIYPVWSGLPSLQMADEESRLSAYYNLLHCLRRDSH 000000000000000011110000000000000000000000000 KIDNYLKLLKCRIIHNNNC 0000000001358999998 >Glucagon; SWP:P01275; PDB:1NAUA SQGTTSEYSKYLDSRRAQDFVQWLMNT 654321111001100000000000011 >Hellethionin D; SWP:P60057; PDB:1NBLA KSCCRNTLARNCYNACRFTGGSQPTCGILCDCIHVTTTTCPSSHP 000000000000000000000000000000000000000000000 S 0 >TRANSCRIPTIONAL FACTOR SW; SWP:P08153; PDB:1NCS_ TLPRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 642210000000000000000000000000000000000000001 DR 24 >Translation initiation fa; SWP:P0A705; PDB:1ND9A TDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQTLI 000000000000000000000000000000100000000000110 DHLN 0001 >30S ribosomal protein S28; SWP:O26356; PDB:1NE3A MDDATPAEVIEVLKRTGMTGEVMQVKCRILDGRDKGRILTRNVMG 320000000000001133321000000000000000000000000 PIREGDILMLLDTIREAKEIRTP 00000000000011112234568 >ergtoxin; SWP:Q86QT3; PDB:1NE5A DRDSCVDKSRCAKYGYYQECQDCCKNAGHNGGTCMFFKCKCA 211000000000000000000000000000000000000000 >Probable translation init; SWP:O27797; PDB:1NEEA GSHMDDYEKLLERAIDQLPPEVFETKRFEVPKAYSVIQGNRTFIQ ---999999999999999999999999975421000001000000 NFREVADALNRDPQHLLKFLLRELGTAGNLEGGRAILQGKFTHFL 000000000000000000000000000000000000000000000 INERIEDYVNKFVICHECNRPDTRIIREGRISLLKCEACGAKAPL 000000000000000000111111100111110000000000011 KNV 246 >Genome polyprotein [Core; SWP:P03300; PDB:1NG7A MGPLQYKDLKIDIKTSPPPECINDLLQAVDSQEVRDYCEKKGWIV 999999999865310000000000000000000000000000000 NITSQVQTERNINRA 013457999999999 >P75 LOW AFFINITY NEUROTRO; SWP:P07174; PDB:1NGR_ GNLYSSLPLTKREEVEKLLNGDTWRHLAGELGYQPEHIDSFTHEA 210000011000000000000000000000000000000000000 CPVRALLASWGAQDSATLDALLAALRRIQRADIVESLCSE 0000000000000100000000000000000000000113 >Probable Thioredoxin; SWP:O26898; PDB:1NHOA MVVNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDR 000000000001100000000000000000000000000000000 EKAIEYGLMAVPAIAINGVVRFVGAPSREELFEAINDEME 0000000000000000000000000000000000000000 >Hypothetical protein ygdK; SWP:P0AGF2; PDB:1NI7A MTNPQFAGHPFGTTVTAETLRNTFAPLTQWEDKYRQLIMLGKQLP 765432110001100000000000000100000000000000000 ALPDELKAQAKEIAGCENRVWLGYTVAENGKMHFFGDSEGRIVRG 000000000000011100000000000000000000000000000 LLAVLLTAVEGKTAAELQAQSPLALFDELGLRAQLSASRSQGLNA 000000000000000000000000000000011111111100000 LSEAIIAATKQVLEHHHHHH 00000000000000------ >HAINANTOXIN-I; SWP:P83591; PDB:1NIXA ECKGFGKSCVPGKNECCSGYACNSRDKWCKVLL 110000000000000000000000000000012 >HAINANTOXIN-IV; SWP:P83471; PDB:1NIYA ECLGFGKGCNPSNDQCCKSSNLVCSRKHRWCKYEI 10000000000000000000000000000000001 >NPL4; SWP:Q9ES54; PDB:1NJ3A GSTSAMWACQHCTFMNQPGTGHCEMCSLPRT 4200000000000000000000000000000 >superman protein; SWP:Q38895; PDB:1NJQA WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL 5321000000000000000000000000246899999 >NK-LYSIN; SWP:Q29075; PDB:1NKL_ GYFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKILRGLC 100000000000000000010000000000000000000000000 KKIMRSFLRRISWDILTGKKPQAICVDIKICKE 000000000000000000000000000000012 >Transcriptional repressor; SWP:P03050; PDB:1NLAA MKGMSKMPQFLNRWPREVLDLVRKVAEENGRSVNSEIYQRVMESF 975421000000000000000000000000000000000000000 KKEGRIGAHHHHHHKNQHE 00000112----------- >amyloid beta-peptide from; SWP:P08592; PDB:1NMJA DAEFGHDSGFEVRHQKLVFFAEDVGSNK 0000000000000000000000000000 >poly(A)-binding protein; SWP:NA; PDB:1NMRA GSSLASQGQNLSTVLANLTPEQQKNVLGERLYNHIVAINPAAAAK 999999875443221111111000000000000000000000000 VTGMLLEMDNGEILNLLDTPGLLDAKVQEALEVLNRHMNV 0000000000000000000000000000000001324556 >Hypothetical protein HI14; SWP:NA; PDB:1NNVA GSHMTTEIKKLDPDTAIDIAYDIFLEMAGENLDPADILLFNLQFE ---764221100000000000000000000000000000000000 ERGGVEFVETADDWEEEIGVLIDPEEYAEVWVGLVNEQDEMDDVF 101000000001111111111100100000000011221111000 AKFLISHREEDREFHVIWKK 00000000111000000001 >ALY; SWP:NA; PDB:1NO8A SRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDADI ----------------------------00000000011000000 QELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYN 000000000000000012444331000000000000000000000 GVPLDGRPMNIQLVTS 0000100000000135 >Oxytetracycline polyketid; SWP:NA; PDB:1NQ4A MTLLTLSDLLTLLRECAGEEESIDLGGDVEDVAFDALGYDSLALL 100000000000000000111111121000000000000000000 NTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASLTGASPSAGG 000000000000000000000000000000000000001368999 AARDK 99999 >DNA-binding protein tfx; SWP:NA; PDB:1NR3A MRERGWSQKKIARELKTTRQNVSAIERKAMENIEKSRNTLDFVKS 753210100000000000111110000001111122110000000 LKSPVRILCRRGDTLDEIIKRLLEESNKEGIHVIHDSITLAFLIR 110000000000000000000000000000000000000000000 EKASHRIVHRVVKSDFEIGVTRDGEIIVDLNS 00000000000000000000000000000001 >NEUROTOXIN V, CSE-V; SWP:NA; PDB:1NRA_ KKDGYPVDSGNCKYECLKDDYCNDLCLERKADKGYCYWGKVSCYC 000000000000000000000000000000000000000000000 YGLPDNSPTKTSGKCNPA 000000000000000000 >Calgizzarin; SWP:NA; PDB:1NSHA SRPTETERCIESLIAVFQKYAGKDGHSVTLSKTEFLSFMNTELAA 521000000000000000000123321000000000000000000 FTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLAVACHES 001221110000000111123321000000000000000000011 FVKAAPPQKRF 01222444578 >PROTEASE; SWP:NA; PDB:1NSOA WVQPITAQKPSLTLWLDDKMFTGLINTGADVTIIKLEDWPPNWPI 321212221110000010000000111111111111111122222 TDTLTNLRGIGQSNNPKQSSKYLTWRDKENNSGLIKPFVIPNLPV 233232333322121221111100000110000011111122211 NLWGRDLLSQMKIMMAS 11111101111122447 >PROTEIN (NITROGEN REGULAT; SWP:NA; PDB:1NTCA MDLPGELFEASTPDSPSHLPPDSWATLLAQWADRALRSGHQNLLS 999999999999999999864200000000000000011010000 EAQPELERTLLTTALRHTQGHKQEAARLLGWGAATLTAKLKELGM 000000000000000000000000000000000000000000001 E 2 >Hypothetical protein AQ_1; SWP:NA; PDB:1NWBA MQEQAQQFIFKVTDKAVEEIKKVAQENNIENPILRIRVVPGGCSG 432111100000000000000000000000000000000112432 FQYAMGFDDTVEEGDHVFEYDGVKVVIDPFSMPYVNGAELDYVVD 100000011011110000000000000000001000100000011 FMGGGFTIRNPNATGSCGCGSSFSCGLEHHHHHH 22110000011----------------------- >Glutamate decarboxylase; SWP:NA; PDB:1NWDB GSHKKTDSEVQLEMITAWKKFVEEKKKK 9998532122121122122122234456 >Complement decay-accelera; SWP:NA; PDB:1NWVA FRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSL 877655434343211234345566665433211123454545554 SPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGILFGA 321123456543323343455543332221221112334334433 TISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREH 221111233221221112233455544332222222234 >conserved hypothetical pr; SWP:NA; PDB:1NXIA MSHQDDYLSVEELIEIQKEETRDIIQALLEDGSDPDALYEIEHHL 999975421000000000000000000000011000000000000 FAEDFDKLEKAAVEAFKMGFEVLEAEETEDEDGNKLLCFDATMQS 000000000000000000000000000001222100000000000 ALDAKLIDEQVEKLVNLAEKFDIIYDGWGTYYEGLEHHHHHH 000000000000000000000000000000001224578999 >30S ribosomal protein S28; SWP:NA; PDB:1NY4A MAEDEGYPAEVIEIIGRTGTTGDVTQVKVRILEGRDKGRVIRRNV 754320000000000001124200000000000000000000000 RGPVRVGDILILRETEREAREIKSRRAAALEHHHHHH 00000000000012234689999999----------- >Protein yrbA; SWP:NA; PDB:1NY8A MIEDPMENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDGM 997542100000000000000000000011000000000000000 SRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGFL 000000000000000000000000000000000000000000000 EHHHHHH 1345689 >Transcriptional activator; SWP:NA; PDB:1NY9A GINLTPEEKFEVFGDFDPDQYEEEVRERWGNTDAYRQSKEKTASY --------------------------------------------- TKEDWQRIQDEADELTRRFVALMDAGEPADSEGAMDAAEDHRQGI ----42100000000000000000000000000000000000000 ARNHYDCGYEMHTCLGEMYVSDERFTRNIDAAKPGLAAYMRDAIL 000111100000000000000000000000000000000000000 ANAVRHTP 00000002 >Calerythrin; SWP:NA; PDB:1NYAA TTAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAG 430000000000000100000000000000000000000001000 AAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFE 000000000000000000000000000000000000000000000 QGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSK 000000000000000000000000000000000000000000000 AEAAEAFNQVDTNGNGELSLDELLTAVRDFHFGRLDVELLG 00000000000000000000000000111121112211123 >Hypothetical 12.0 kDa pro; SWP:NA; PDB:1NYNA MGSSHHHHHHSSGLVPRGSHMSTVTKYFYKGENTDLIVFAASEEL --------------------5310000000000000000000000 VDEYLKNPSIGKLSEVVELFEVFTPQDGRGAEGELGAASKAQVEN 000000001000000000000000012332122110000000000 EFGKGKKIEEVIDLILRNGKPNSTTSSLKTKGGNAGTKAYN 01111100000000000101346899999999999999999 >Immunogenic protein MPT70; SWP:NA; PDB:1NYOA GDLVGPGCAEYAAANPTGPASVQGMSQDPVAVAASNNPELTTLTA 310000000000000000000000000000000000000000000 ALSGQLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTN 000000000000000000000000000000000000000000000 SSLLTSILTYHVVAGQTSPANVVGTRQTLQGASVTVTGQGNSLKV 000000000000000000000000000000000000001111000 GNADVVCGGVSTANATVYMIDSVLMPPA 0000000000000000000000000001 >PINCH protein; SWP:NA; PDB:1NYPA GSMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHR 432100000000000000000000000000000000000000000 HYERKGLAYCETHYNQLFGDV 000000000000000000012 >TRANSCRIPTION ANTITERMINA; SWP:NA; PDB:1NZ8A SIEWYAVHTLVGQEEKAKANLEKRIKAFGLQDKIFQVLIPTEEVV 100000000011101100000000011110110000000111112 ELREGGKKEVVRKKLFPGYLFIQMDLGDEEEPNEAWEVVRGTPGI 345665432111111010000000011222111100000000111 TGFVGAGMRPVPLSPDEVRHILEVSGLLG 12123332100000000000000111112 >TRANSCRIPTION ANTITERMINA; SWP:NA; PDB:1NZ9A AQVAFREGDQVRVVSGPFADFTGTVTEINPERGKVKVMVTIFGRE 753110000000000000000000000000100000000011100 TPVELDFSQVVKA 0000000000000 >Apoptosis regulator Bcl-W; SWP:NA; PDB:1O0LA GPLGSMATPASAPDTRALVADFVGYKLRQKGYVCGAGPGEGPAAD 999999975321000000000000000000000000000000000 PLHQAMRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQVSDE 000000000000000000000000000000000000000000000 LFQGGPNWGRLVAFFVFGAALCAESVNKEMEPLVGQVQEWMVEYL 000000000000000000000000000000000000000000000 ETRLADWIHSSGGWAEFTALYGDGALEEARRLREGNWASVRTVLT 000000000000000000000000000000000000000000000 GAVALGAL 00000002 >Gastrotropin; SWP:NA; PDB:1O1UA AFTGKFEMESEKNYDEFMKLLGISSDVIEKARNFKIVTEVQQDGQ 100000000000000000000000000000000000000000000 DFTWSQHYSGGHTMTNKFTVGKESNIQTMGGKTFKATVQMEGGKL 000000012210000000000000000012210000000001000 VVNFPNYHQTSEIVGDKLVEVSTIGGVTYERVSKRLA 0000000000000000000000001000000000001 >PRE-MRNA PROCESSING PROTE; SWP:NA; PDB:1O6WA MSIWKEAKDASGRIYYYNTLTKKSTWEKPKELISQEELLLRENGW 200000000000000000000000000000000000000000000 KAAKTADGKVYYYNPTTRETSWTIPAFEKK 000011110000000000000000000012 >BIOTIN CARBOXYL CARRIER P; SWP:NA; PDB:1O78A MKLKVTVNGAGKAGEGEIPAPLAGTVSKILVKEGDTVKAGQTVLV 999999986432111111111111001000010000000000000 LEAMKMETEINAPTDGKVEKVLVKERDAVQGGQGLIKIG 012343210000000000000001111122111000001 >TUMOR NECROSIS FACTOR-IND; SWP:NA; PDB:1O7BT GVYHREARSGKYKLTYAEAKAVCEFEGGHLATYKQLEAARKIGFH 000000011000000000000000000000000000000000000 VCAAGWMAKGRVGYPIVKPGPNCGFGKTGIIDYGIRLNRSERWDA 000000000000000000011100110000000000000000000 YCYNPHAK 00000001 >GUANYLIN; SWP:NA; PDB:1O8RA VTVQDGNFSFSLESVKKLKDLQEPQEPRVGKLRNFAPIPGEPVVP 000000000000000000001222223433211111211111112 ILCSNPNFPEELKPLCKEPNAQEILQRLEEIAEDPGTCEICAYAA 211000000000000000000000000000000000000000000 CTGC 0001 >OCT-3; SWP:NA; PDB:1OCP_ METLVQARKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQL 999999998753210000000000000000000000000000000 GLEKDVVRVWFCNRRQKGKRSS 0000000000000000112346 >APOLIPOPROTEIN E; SWP:NA; PDB:1OEF_ SWFEPLVEDMQRQWAGLVEKVQAA 110000000000000000000001 >APOLIPOPROTEIN E; SWP:NA; PDB:1OEG_ PLVEDMQRQWAGLVEKVQAAVGT 11000000000000000000046 >PORE-FORMING PEPTIDE AMEO; SWP:NA; PDB:1OF9A GEILCNLCTGLINTLENLLTTKGADKVKDYISSLCNKASGFIATL 321100000000000000001110000000000000000000000 CTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 00000000000000000000000000000001 >STAPHOSTATIN A; SWP:NA; PDB:1OH1A GSMEQFELFSIDKFKCNSEAKYYLNIIEGEWHPQDLNDSPLKFIL 432110000000011111000000000000011221110000000 STSDDSDYICKYINTEHKQLTLYNKNNSSIVIEIFIPNDNKILLT 012211000000001110000000001100000000000000000 IMNTEALGTSPRMTFIKHK 0000112221100000012 >BACTERIOCIN SAKACIN P; SWP:NA; PDB:1OHMA KYYGNGVHCGKHSCTVDWGTAIGCIGNNAAANWATGGNAGWNKC 98765446799986421000000000000000000111111111 >DUMPY; SWP:NA; PDB:1OIGA RPECVLNSDCPSNQACVNQKCRDP 110000000012100000000001 >SENSOR PROTEIN DCUS; SWP:NA; PDB:1OJGA SDMTRDGLANKALAVARTLADSPEIRQGLQKKPQESGIQAIAEAV 111000000000000000100000000000100100000000011 RKRNDLLFIVVTDMQSLRYSHPEAQRIGQPFKGDDILKALNGEEN 111111000000011000001100000111111111111111000 VAINRGFLAQALRVFTPIYDENHKQIGVVAIGLELSRVTQQINDS 000111111100000000011110000000000111111222233 R 2 >TUMOR SUPPRESSOR P53 (OLI; SWP:NA; PDB:1OLGA KKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPG 100100000000000000000000000000000000000010 >Neural-cadherin; SWP:NA; PDB:1OP4A GHHHHHHHHHHSSGHIDDDDKHMEASGEIALCKTGFPEDVYSAVL -----------------------0000000000000000000000 PKDVHEGQPLLNVKFSNCNRKRKVQYESSEPADFKVDEDGTVYAV 000000000000000000000000000000000000000000000 RSFPLTAEQAKFLIYAQDKETQEKWQVAVNLSREPTLTEEPMKEP 000000000000000000000000000000000000000000000 HEIEEIVFPRQLAKHSGALQRQKR 000000000000000000000000 >conserved protein MTH11; SWP:NA; PDB:1OQKA GSHMLITPRNIFRHELIGLSVRIARSVHRDIQGISGRVVDETRNT ------------542100000000000000000000000000000 LRIEMDDGREITVPKGIAVFHFRTPQGELVEIDGRALVARPEERI 000000000000000000000000000000000001111123445 KKKFRKP ------- >UV excision repair protei; SWP:NA; PDB:1OQYA GPLGSSAVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDA -----9999999999999999999999999999999999999999 FPVAGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMVTKTKAGQGT 999999999999999999999999999999999999999999999 SAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAP 999999999999999999999999999999999999999999999 TTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGY 999999999999999999999999999999999999999999999 ERERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSE 999999999999999999999999999999999999999999999 QPATEAAGENPLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQE 999999999999999999999999999999999999999999999 NPQLLQQISRHQEQFIQMLNEPPGELADISDVEGEVGAIGEEAPQ 999999999999999999999999999999999999999999999 MNYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFL 999999999999999999999999999999999999999999999 LSQNFDDE 99999999 >acyl carrier protein; SWP:NA; PDB:1OR5A MSALTVDDLKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLE -00000000000000000000000000000000000000000000 TAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTPATA 00000000000000000000000000000000000000 >Viscotoxin C1; SWP:NA; PDB:1ORLA KSCCPNTTGRNIYNTCRFAGGSRERCAKLSGCKIISASTCPSDYP 100000000000000000000000000000000000011011000 K 0 >50S ribosomal protein L1; SWP:NA; PDB:1OT0A AKKVFKRLEKLFSKIQNWK 2110000000000000000 >protein Cue2; SWP:NA; PDB:1OTRA NDDHESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKEN -------2-----------655-5-----------1-------6- DDKS ---- >Alpha-2-macroglobulin rec; SWP:NA; PDB:1OV2A YSREKNQPKPSPKRESGEEFRMEKLNQLWEKAQRLHLPPVRLAEL ----------------21000000000000000000000000000 HADLKIQERDELAWKKLKLDGLDEDGEKEARLIRNLNVILAKYGL 000000000000000000000000000000000000000000000 DGKKDARQV 02457899- >50S Ribosomal Protein L18; SWP:NA; PDB:1OVYA MITKVDRNAVRKKRHARIRKKIFGTTERPRLSVFRSNKHIYAQII -----------------------4653210000000100000000 DDTKSATIVSASTLDKEFGLDSTNNIEAAKKVGELVAKRALEKGI 001111110000111111121111110000000000000011111 KQVVFDRGGYLYHGRVKALADAAREAGLEF 100100111111100000000000000101 >Serine/threonine-protein; SWP:NA; PDB:1OW5A GHHHHHHGDEKTNDLPFVQLFLEEIGCTQYLDSFIQCNLVTEEEI ---------------000000000000000000000000000000 KYLDKDILIALGVNKIGDRLKILRKSKSFQRDKRIEQVNR 000000000000000000000000000000---------- >Spectrin alpha chain, ery; SWP:NA; PDB:1OWAA MEQFPKETVVESSGPKVLETAEEIQERRQEVLTRYQSFKERVAER 999999999999999999999999999999999997765555677 GQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDKSYEDPTNIQGK 899999999999877656645655786899999999999999999 YQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEE 898678668768978999999999999999999999999998899 LRHLWDLLLELTLEKGDQLLR 678657744553455467667 >Fibronectin first type II; SWP:NA; PDB:1OWWA GPLGSSGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPK -----1000000122221100000000000111000000000000 NSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVT 111100000000000000000000000000000000011000000 RFDFTTTS 00000011 >Lupus La protein; SWP:NA; PDB:1OWXA MRGSHHHHHHGSLEEKIGCLLKFSGDLDDQTCREDLHILFSNHGE --------9999876431000000011111100000000000010 IKWIDFVRGAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTW 000000001000000000000000000000000000000000000 EVLEGEVEKEALKKIIEDQQESLNKWKSKGR 0000000000000000000011225799999 >double-stranded RNA-bindi; SWP:NA; PDB:1OYIA GSHMASKIYIDERSNAEIVCEAIKTIGIEGATAAQLTRQLNMEKR ------------110000000000000000000000000000000 EVNKALYDLQRSAMVYSSDDIPPRWFMTTEADEADAD 00000000000000000000100000001-------- >defensin ARD1; SWP:NA; PDB:1OZZA DKLIGSCVWGAVNYTSNCNAECKRRGYKGGHCGSFANVNCWCET 00000000010000000000000000000000001100000000 >19-mer peptide from 50S r; SWP:NA; PDB:1P0GA AKKVFKRLEKLFSKIQNDK 1100000000000000134 >19-mer peptide from 50S r; SWP:NA; PDB:1P0LA AKKVFKRLEKLFSKIWNDK 2100000000000000000 >19-mer peptide from 50S r; SWP:NA; PDB:1P0OA AKKVFKRLEKLFSKIWNWK 2100000000000000000 >Glutamate receptor intera; SWP:NA; PDB:1P1DA QVVHTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEA 211000000000000111100000011121222221100000111 DSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKV 110011110000000000000001111000000000000000000 TLEIEFDVAESVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGD 000000000110000000000000011110100000012333321 PLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQIL 000000000100000010100100000001000111000000000 QQCEDLVKLKIRKDED 0001000000001124 >Cleavage stimulation fact; SWP:NA; PDB:1P1TA DPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRE 321000001000000000000000000000000000000000000 TGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKN 000000000000000000000000000000101000000000000 KEELKSLGTGAPVI 00000001234568 >rcsB; SWP:NA; PDB:1P4WA MRGSHHHHHHGSYTPESVAKLLEKISAGGYGDKRLSPKESEVLRL ------------110000000000000111212110000000000 FAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVDNDIALLNYLS 000000000000000000000000000000000000000000000 SVSMTPVDK 000000012 >19-mer peptide from 50S r; SWP:NA; PDB:1P5KA AKKVFKRLEKSFSKIQNDK 2100000000000000012 >19-mer peptide from 50S r; SWP:NA; PDB:1P5LA AKKVSKRLEKLFSKIQNDK 2100000000000000256 >De novo designed protein; SWP:NA; PDB:1P68A MYGKLNDLLEDLQEVLKNLHKNWHGGKDNLHDVDNHLQNVIEDIH 100000000000000000000000100000000000000000000 DFMQGGGSGGKLQEMMKEFQQVLDELNNHLQGGKHTVHHIEQNIK 000000000000000000000000000000010000000000000 EIFHHLEELVHR 000000000000 >CheY2; SWP:NA; PDB:1P6QA MSLAEKIKVLIVDDQVTSRLLLGDALQQLGFKQITAAGDGEQGMK 100000000000000000000000000000000000000000000 IMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 000000000000000000000000000000000000000000000 GDRALVQKAAALGANNVLAKPFTIEKMKAAIEAVFGALK 000000000000000000000000000000000000011 >Penicillinase repressor; SWP:NA; PDB:1P6RA MKKIPQISDAELEVMKVIWKHSSINTNEVIKELSKTSTWSPKTIQ 653211100000000000000000000000000000000000000 TMLLRLIKKGALNHHKEGRVFVYTPNIDESDYIEVKS 0000000000000000011000000001221135699 >RAC-beta serine/threonine; SWP:NA; PDB:1P6SA MNEVSVIKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPEAP 421000000000000122210000000000000000000011234 DQTLPPLNNFSVAECQLMKTERPRPNTFVIRCLQWTTVIERTFHV 442211101011010000000000000000112345543200000 DSPDEREEWMRAIQMVANSLK 000000000000000000001 >Potential copper-transpor; SWP:NA; PDB:1P6TA MLSEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATET 642100000000000011000000000000000000000000000 VNVIYDPAETGTAAIQEKIEKLGYHVVTEKAEFDIEGMTCAACAN 000000000000000000000000000000000000011210000 RIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKL 000000000000000000000000000000000000000000000 GYKLKLKGEQDSIEGR 0000000113344689 >Kruppel-like factor 3; SWP:NA; PDB:1P7AA GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 4446643100000000000000000000000000012 >protein tyrosine phosphat; SWP:NA; PDB:1P8AA AAEKKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFHV 321110000001111122100000000111121010000111111 GQSPDTRSQKVCKSNGVDISKQRARQITKADFSKFDVIAALDQSI 110100000000000111122111111100000000000000000 LSDINSMKPSNCRAKVVLFNPPNGVDDPYYSSDGFPTMFASISKE 000000001111100000111211111211111100000000011 MKPFLTEHGLI 00000001111 >Pea Albumin 1, subunit b; SWP:NA; PDB:1P8BA ASCNGVCSPFEMPPCGTSACRCIPVGLVIGYCRNPSG 2100000000000100000000000000000000012 >plasmid partition protein; SWP:NA; PDB:1P94A MSLEKAHTSVKKMTFGENRDLERVVTAPVSSGKIKRVNVNFDEEK 999999999999999999999999998888999877665444443 HTRFKAACARKGTSITDVVNQLVDNWLKENE 2332333344444434322332333444556 >Endothelial PAS domain pr; SWP:NA; PDB:1P97A GAMDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFY 754210000000000000000000000000000000000000000 HALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVI 000000000000000000000000000000000000000000000 YNPRNLQPQCIMCVNYVLSEIEKN 000000000000000000000001 >chimera of Epidermal grow; SWP:NA; PDB:1P9JA VVSHFNDCPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 233322223433222111110000011110000000000011110 YRDLKWWEL 001122334 >orf, hypothetical protein; SWP:NA; PDB:1P9KA GSMIHRMSNMATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAE 999976531100000110000000000000000000000000000 GQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA 0000000000000000000000000000000001 >Probable ribosome-binding; SWP:NA; PDB:1PA4A MASYKKERLENDIIRLINRTVIHEIYNETVKTGHVTHVKLSDDLL -----2100000000000000011011100001111100001100 HVTVYLDCYNREQIDRVVGAFNQAKGVFSRVLAHNLYLAKAVQIH 000001111100000000000000000000000011112210100 FVKDKAIDNAMRIESIINSLKKSKPN 00112335666--------------- >Hypothetical protein Ta11; SWP:NA; PDB:1PAVA MDVKPDRVIDARGSYCPGPLMELIKAYKQAKVGEVISVYSTDAGT 100000000000000000000000000000000000000000000 KKDAPAWIQKSGQELVGVFDRNGYYEIVMKKVK 000000000000000000000000000000000 >Neurogenic locus notch ho; SWP:NA; PDB:1PB5A EEACELPECQEDAGNKVCSLQCNNHACGWDGGDCS 10000000000000000000000000000000001 >Elongation factor 1-gamma; SWP:NA; PDB:1PBUA AKDPFAHLPKSTFALDEFKRKYSNEDTLSVALPYFWEHFDKDGWS 310000000000000000000000000000000000000000000 LWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGT 000000000000000000000000000000000000000000000 NNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQ 000000000000000000000000000000000000000000000 TLVREYFSWEGAFQHVGKAFNQGKIFK 000000000000000000000000000 >De novo designed cyclic p; SWP:NA; PDB:1PBZA CGAEAAKAHAKAAEAGC 20000000000000012 >Hypothetical protein AF19; SWP:NA; PDB:1PC0A GLMVEVVESPNHSEVGIKGEVVDETQNTLKIMTEKGLKVVAKRGR 100000000012200000000012210000000000000011110 TFRVWYKGKIMRIKGD 0000000000000002 >PEC-60; SWP:NA; PDB:1PCE_ EKQVFSRMPICEHMTESPDCSRIYDPVCGTDGVTYESECKLCLAR 865310000112355554311111000000000000000000000 IENKQDIQIVKDGEC 000000000000001 >Myosin-binding protein C,; SWP:NA; PDB:1PD6A MHHHHHHSSMDEKKSTAFQKKLEPAYQVSKGHKIRLTVELADHDA ----------21101000000000000000000000000000000 EVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCV 000000000000000000000001000000000000000000000 VGGEKCSTELFVKE 00000000000000 >Neurotoxin Cn11; SWP:NA; PDB:1PE4A RDGYPLASNGCKFGCSGLGENNPTCNHVCEKKAGSDYGYCYAWTC 100111111100000112221000000000001111000000100 YCEHVAEGTVLWGDSGTGPCRS 0000011111111111112113 >PEPNH1; SWP:NA; PDB:1PEH_ NEKKYHLQERVDKVKKKVKDVEEKSKEWVQKVE 877755433332221111000000000000000 >PEPC22; SWP:NA; PDB:1PEI_ VEEKSIDLIQKWEEKSREFIGS 1000000000000000000001 >FERREDOXIN; SWP:NA; PDB:1PFD_ ATYNVKLITPDGEVEFKCDDDVYVLDQAEEEGIDIPYSCRAGSCS 100000000000000000000000000000000000111111111 SCAGKVVSGSIDQSDQSFLDDEQMDAGYVLTCHAYPTSDVVIETH 110000000000000010000000000000110000000000000 KEEEIV 000000 >TFIIH basal transcription; SWP:NA; PDB:1PFJA MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISH 653211000000000000000000000000000002222100000 MYADIKCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERD 000000000011111000000000000000000011110000000 AVKDLLQQLLPKFKRKAN 000000000000011357 >PF4-M2 CHIMERA; SWP:NA; PDB:1PFMA MSAKELRCQCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKN 433331000010000000000000000000000000000000000 GRKICLDLQAPLYKKIIKKLLES 00000000000000000000000 >TFIIB; SWP:NA; PDB:1PFT_ MVNKQKVCPACESAELIYDPERGEIVCAKCGYVIEENIIDMGPEW 998531000000000000000000000000000001123467899 RAFDA 99999 >PROTEGRIN-1; SWP:NA; PDB:1PG1_ RGGRLCYCRRRFCVCVGR 642000000110000001 >Swa2p; SWP:NA; PDB:1PGYA ALVDEVKDMEIARLMSLGLSIEEATEFYENDVTYERYLEILKSKQ 542000000000000000000000000000000000000000013 KE 46 >Cobatoxin 1; SWP:NA; PDB:1PJVA AVCVYRTCDKDCKRRGYRSGKCINNACKCYPY 10000000000000000000000100000001 >envelope protein; SWP:NA; PDB:1PJWA DKLALKGTTYGMCTEKFSFAKNPADTGHGTVVIELSYSGSDGPCK 975433332111000000000000001000000000000000000 IPIVSVASLNDMTPVGRLVTVNPFVATSSANSKVLVEMEPPFGDS 000000000001100000001000000000000000000000000 YIVVGMGDKQINHHWHKAGST 000001111000000122346 >Thiopurine S-methyltransf; SWP:NA; PDB:1PJZA GSHQSEVNKDLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGY --2100000000000000000000000000011100000000000 HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGD 000000000000000000000000000011000000100000000 FFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACS 000100000000000000000000000000000000000000000 GLLITLEYDQALLEGPPFSVPQTWLHRVMSGNWEVTKVGGQDTLH 000000000000000000000000000000000000000000001 SSARGLKAGLERMDEHVYVLERV 00000000000000000000000 >TISSUE-TYPE PLASMINOGEN A; SWP:NA; PDB:1PK2_ SEGNSDCYFGNGSAYRGTHSLTESGASCLPWNSMILIGKVYTAQN 000000000000000000000000000000000000000000000 PSAQALGLGKHNYCRNPDGDAKPWCHVLKNRRLTWEYCDVPSCST 000000000000000000000000000000000000000000000 >PLASTOCYANIN; SWP:NA; PDB:1PLA_ AEVKLGSDDGGLVFSPSSFTVAAGEKITFKNNAGFPHNIVFDEDE 000000001100000000000000000000000000000000000 VPAGVNAEKISQPEYLNGAGETYEVTLTEKGTYKFYCEPHAGAGM 000000000000000000000000000000000000000000000 KGEVTVN 0000000 >PLECKSTRIN HOMOLOGY DOMAI; SWP:NA; PDB:1PLS_ MEPKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPK 542100000000001222110000000000000000000000000 GMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERD 000001000000011112111000000001000000000000000 AWVRDINKAIKCIEGLEHHHHHH 00000000000000112347999 >DIHYDROLIPOYL SUCCINYLTRA; SWP:NA; PDB:1PMR_ SSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVV 100000000122221000000000000111111000000001000 LEVPASADGILDAVLEDEGTTVTSRQILGRLREGN 00000101000000000000000000000000123 >NACHT-, LRR- and PYD-cont; SWP:NA; PDB:1PN5A MQYKLILNGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTY --------------------------------------------- DDATKTFTVTEGSMAGGAWGRLACYLEFLKKEELKEFQLLLANKA -------------43211100000000000000000000000001 HSRSSSGETPAQPEKTSGMEVASYLVAQYGEQRAWDLALHTWEQM 235566666543211000000000000000000000000000000 GLRSLCAQAQEGAGHSLEHHHHHH 0000000000123579-------- >SCORPION TOXIN; SWP:NA; PDB:1PNH_ TVCNLRRCQLSCRSLGLLGKCIGVKCECVKH 2100000000000000000000000000001 >OCT-1 POU HOMEODOMAIN DNA; SWP:NA; PDB:1POG_ RRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEV 975310000000000000000000001000000000000000000 IRVWFCNRRQKEKRIDI 00000000011234578 >microcin J25; SWP:NA; PDB:1PP5A GGAGHVPEYFVGIGTPISFYG 000000000011110000001 >Ndr Ser/Thr kinase-like p; SWP:NA; PDB:1PSBC KRLRRSAHARKETEFLRLKRTRLGLE 99999986322100000000000012 >PHOTOSYSTEM I ACCESSORY P; SWP:NA; PDB:1PSE_ AIERGSKVKILRKESYWYGDVGTVASIDKSGIIYPVIVRFNKVNY 100000000000000000000000000011100000000000001 NGFSGSAGGLNTNNFAEHELEVVG 223444321000000000000001 >SPAM-H1; SWP:NA; PDB:1PSM_ EAYKKAKQASQDAEQAAKDAENASKEAEEAAKEAVNLK 99999865311000111111110001233446888999 >PDA8D; SWP:NA; PDB:1PSV_ KPYTARIKGRTFSNEKELRDFLETFTGR 1111111111100000000000000122 >2S albumin; SWP:NA; PDB:1PSYA AEFMESKGEREGSSSQQCRQEVQRKDLSSCERYLRQSSSRRSTGE 999999999864211110000000000000000000122223444 EVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQI 433455443222211000000000000000000000000000000 QQGQLHGEESERVAQRAGEIVSSCGVRCMRQTRTN 01010111000000000000000000000001124 >kalata B2; SWP:NA; PDB:1PT4A CGETCFGGTCNTPGCSCTWPICTRDGLPV 00000000000000000000000000000 >Hypothetical protein MTH6; SWP:NA; PDB:1PU1A GSHMSLRKLTEGDLDEISSFLHNTISDFILKRVSAKEIVDIDITV ---421110000000000000000000000000000000000000 LVEYTDELKVDISAELYLDELSDADPGIVDEAVDAAYRSLESFLD 000000000000000000000000000000000000000000000 GFRE 1112 >Hypothetical protein C32E; SWP:NA; PDB:1PULA MGHHHHHHSHMAAAAGFNWDDADVKKRWDAFTKFGAATATEMTGK -----------------2112111100011112232432211111 NFDKWLKDAGVLDNKAITGTMTGIAFSKVTGPKKKATFDETKKVL 000000000001132211100000001112223322110000000 AFVAEDRARQSKKPIQDELDAITEKLAKLEAPSVG 000000000111000000000000011112----- >conserved hypothetical pr; SWP:NA; PDB:1PUZA MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELSE 432100000000000011100000000000000001110000000 FSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA 0000000000000000000000000000000000000 >Sda; SWP:NA; PDB:1PV0A MRKLSDELLIESYFKATEMNLNRDFIELIENEIKRRSLGHIISVS 110000000000000000000000000000000000000000012 S 2 >Focal adhesion kinase 1; SWP:NA; PDB:1PV3A GSPGISGGGGGIRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYV 999999986421121000000000000000000012222111100 PMVKEVGLALRTLLATVDESLPVLPASTHREIEMAQKLLNSDLAE 000000000000000000000000110000000000000000000 LINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDVIDQA 000000000000000000000000000000000000000000000 RLKMISQSRPH 00001113456 >UV excision repair protei; SWP:NA; PDB:1PVEA GSHMPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQ 653210111121100000000000000000000000000000000 QISQHQEHFIQMLNEPVQEAGGQGGGG 000000000000000112467889999 >K+ toxin-like peptide; SWP:NA; PDB:1PVZA TPFAIKCATDADCSRKCPGNPPCRNGFCACT 4320000000000000000000001000012 >Subtilosin A; SWP:NA; PDB:1PXQA NKGCATCSIGAACLVDGPIPDFEIAGATGLFGLWG 11211111112345677876544332100000001 >ATP synthase beta chain,; SWP:NA; PDB:1PYVA MASRRLLASLLRQSAQRGGGLISRSLGNSIPKSASRASSRASPKG -31100000000000013322122111111223222212100000 FLLNRAVQY 000000001 >Erythronolide synthase; SWP:NA; PDB:1PZQA GSAASPAVDIGDRLDELEKALEALSAEDGHDDVGQRLESLLRRWN 643210000000000000000000000000000000000000000 SRRADAPSTSAISED 000003578999999 >sequestosome 1; SWP:NA; PDB:1Q02A GSPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALD 997653100000000000000000100000000000000000000 TIQYSKH 0001135 >hydrophilic protein; has; SWP:NA; PDB:1Q0VA MDRDYSTPEDEEELIRKAIELSLKESRNSASSEPIVPVVESKNEV 999999999999999888776777678999999999999999999 KRQEIEEEEDPDLKAAIQESLREAEEAKLRSERQKA 988788877677656555555556767888999999 >Cell division control pro; SWP:NA; PDB:1Q1OA GPLGSILFRISYNNNSNNTSSSEIFTLLVEKVWNFDDLIMAINSK 321100000000012233431000000000000000000000000 ISNTHNNNISPITKIKYQDEDGDFVVLGSDEDWNVAKEMLAENNE 000112221110000000000000000000000000000000000 KFLNIRLY 00000001 >DEK protein; SWP:NA; PDB:1Q1VA DEPLIKKLKKPPTDEELKETIKKLLASANLEEVTMKQICKKVYEN 999997531100000000000000000000000000000000000 YPTYDLTERKDFIKTTVKELISLEH 0000000000000000000000001 >Putative Nudix hydrolase; SWP:NA; PDB:1Q27A MGGVSDERLDLVNERDEVVGQILRTDPALRWERVRVVNAFLRNSQ 975432110011122111100011112111111000000000011 GQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREEL 000000123445543211000000000011100000000000001 NVEIDALSWRPLASFSPFQTTLSSFMCVYELRSDATPIFNPNDIS 010000000000000122211110000000000111112121111 GGEWLTPEHLLARIAAGEAAKGDLAELVRRCYREEE 000000000000000111111110011001111356 >PNC27; SWP:NA; PDB:1Q2FA PPLSQETFSDLWKLLKKWKMRRNQFWVKVQRG 75421110000000000000000000000012 >Neurotoxin BmK37; SWP:NA; PDB:1Q2KA AACYSSDCRVKCVAMGFSSGKCINSKCKCYK 1000000000000000000000000000000 >ALO3; SWP:NA; PDB:1Q3JA CIKNGNGCQPNGSQGNCCSGYCHKQPGWVAGYCRRK 211100000011122111120000111100000112 >Cytidylate kinase; SWP:NA; PDB:1Q3TA MKHHHHHHDDDDKMKTIQIAIDGPASSGKSTVAKIIAKDFGFTYL -------------00000000000000000000000000000000 DTGAMYRAATYMALKNQLGVEEVEALLALLDQHPISFGRSETGDQ 000000000000000000000000000000000000000000000 LVFVGDVDITHPIRENEVTNHVSAIAAIPEVREKLVSLQQEIAQQ 000000000000000000000000000000000000000000000 GGIVMDGRDIGTVVLPQAELKIFLVASVDERAERRYKENIAKGIE 000000000000000000000000000000000000000000000 TDLETLKKEIAARDYKDSHRETSPLKQAEDAVYLDTTGLNIQEVV 000000000000000000000000000000000000000000000 EKIKAEAEKRM 00000000000 >NifU-like protein; SWP:NA; PDB:1Q48A MAYSEKVIDHYENPRNVGSLDKKDSNVGTGMVGAPACGDVMQLQI 999999999999999876311211000000000011110000000 KVDDNGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLEEAGAIKN 001211000000000000110000000000000000000000100 SQIAEELELPPVKVHCSILAEDAIKAAIADYKAKQGLEHHHHHH 00000000011110000000000000000000011234689999 >EP-cadherin; SWP:NA; PDB:1Q55A MGSTRLRNASVWLCGLLCLLQVVPSINADVSGCKPGFSSAEYIFS --------------------------------------------- VNRRELERGRKLGKVNFSDCTTRKHGLYDVGDSRFRVLPDGTVLV --------------------------------------------- KRHVKLHKDTKFTISTWDARGIKHSTNIAVASKRHRSGEEAHSRS --------------------------------------------- SKLPVLTFPETHTGLKRKKRDWVIPPIKVSENERGPFPKRLVQIK --------------------9999999999999999999999999 SNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREE 999999999999999999999999999999999999999999999 YDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRG 999999999999999999999999999999999999999999865 SVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIP 568999999998778999999999999999999999988899999 NLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEG 999999999999999999976676667888999999999999999 KAIIQITDANDNAPIFDPKTYTALVPENEIGFEVQRLSVTDLDMP 977655556887766667887778888877666665555555433 GTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQ 224433467999999998755333564344455667789999999 YVLQITVENAEPFSVPLPTSTATVTVTVEDVNEAPFFVPAVSRVD 999999877789999999999899888899999999999999999 VSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDN 999999999999999999999999999999999999999999999 GIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHV 999999999999999999999999999999999999999999999 LDVNDNGPVPSPRVFTMCDQNPEPQVLTISDADIPPNTYPYKVSL 999999999999999999999999999999999999999999999 SHGSDLTWKAELDSKGTSMLLSPTQQLKKGDYSIYVLLSDAQNNP 999999999999999999999999999999999999999999999 QLTVVNATVCSCEGKAIKCQEKLVGGFDLPIILVILGSVLALLIL 99999999999999999999------------------------- FLLLLLFLKRKKVVKEPLLLPEDDTRDNIFYYGEEGGGEEDQDYD --------------------------------------------- LSQLHRGLDSRPDIMRNDVVPTLMPAPHYRPRPSNPDEIGNFIDE --------------------------------------------- NLDAADNDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSNSNDEHD --------------------------------------------- YNYLSDWGSRFRKLADMYGGDDDEE ------------------------- >PilS; SWP:NA; PDB:1Q5FA MWGKKDAGTELTNYQTLATNTIGMMKGVDGYAFTSGAKMTDTLIQ 332211100000000000000110011122222221000000000 AGAAKGMTVSGDPASGSATLWNSWGGQIVVAPDTAGGTGFNNGFT 000000000001222100000011100000000112444221000 ITTNKVPQSACVSISTGMSRSGGTSGIKINGNNHTDAKVTAEIAS 000000000000000000000010100000000000000000000 SECTADNGRTGTNTLVFNYNG 011234332111000000012 >General transcription fac; SWP:NA; PDB:1Q60A GSSGSSGLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFY 864211000000000000000000000000000000000000000 VEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAI 000000000000000000000000000000000000000000000 KESSGPSSG 001246799 >Hemorrhagic protein-rhodo; SWP:NA; PDB:1Q7IA GKECDCSSPENPCCDAATCKLRPGAQCGEGLCCEQCKFSRAGKIC 422111112211112232211111000000000000000000000 RIARGDWNDDRCTGQSADCPRYH 01122221100000000001122 >PDZ2b domain of PTP-Bas (; SWP:NA; PDB:1Q7XA GSSPPKPGDIFEVELAKNDNSLGISVTVLFDKGGVNTSVRHGGIY 864310000000000000000000000000000000000000000 VKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNT 000000000000000000000000000000000000000000000 GQVVHLLLEKGQSPTSKE 000000000000246788 >Cofilin, non-muscle isofo; SWP:NA; PDB:1Q8GA MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKK 642101000000000000011101000000000000000000000 NIILEEGKEILVGDVGQTVDDPYATFVKMLPDKDCRYALYDATYE 000001000000001111100000000000000000000000000 TKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIKHEL 011000000000000000000110000000000000000001000 QANCYEEVKDRCTLAEKLGGSAVISLEGKPL 0000000000000000000000000000001 >Copper-transporting ATPas; SWP:NA; PDB:1Q8LA GSMAQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLD 998643100000000001121100000000000000000000012 NQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQPKYLK 000000000100000000000000000000013579999 >INHIBITOR OF APOPTOSIS PR; SWP:NA; PDB:1QBHA GSHMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCF 996421100000000000000000000000000000001100100 CCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRY 001112111221000000000000000000000000000000000 PHLLEQLLSTS 00112357899 >PROTEIN (RUBREDOXIN VARIA; SWP:NA; PDB:1QCVA AKWVLKITGYIYDEDAGDPDNGISPGTKFEELPDDWVAPITGAPK 000000100000000000000000000000001111112332211 SEFEKLED 10000012 >ROBUSTOXIN; SWP:NA; PDB:1QDP_ CAKKRNWCGKNEDCCCPMKCIYAWYNQQGSCQTTITGLFKKC 101000000000000000000011111000000010001111 >PROTEIN (REGULATORY PROTE; SWP:NA; PDB:1QEYA RNDAERLADEQSELVKKMVFDTLKDLYKKTT 2100000000000000000000000000001 >PROTEIN (SODIUM CHANNEL P; SWP:NA; PDB:1QG9A NVEYTFTGIYTFESLIKILAR 653100000000000000001 >PROTEIN (RIBONUCLEASE HI); SWP:NA; PDB:1QHKA GNFYAVRKGRETGIYNTWNECKNQVDGYGGAIYKKFNSYEQAKSF 000000013432000000000000001111010000000000000 LG 01 >METALLOTHIONEIN; SWP:NA; PDB:1QJKA PDVKCVCCTEGKECACFGQDCCVTGECCKDGTCCGI 000000000000000000000000000000000000 >METALLOTHIONEIN; SWP:NA; PDB:1QJLA ICTNAACKCANGCKCGSGCSCTEGNCAC 0000000000000000000000000000 >DIHYDROLIPOAMIDE ACETYLTR; SWP:NA; PDB:1QJOA MVKEVNVPDIGGDEVEVTEVMVKVGDKVAAEQSLITVEGDKASME 100000001112100000000000000000000000001110000 VPAPFAGVVKELKVNVGDKVKTGSLIMIFEVEGAA 00000000000000000000000000000001357 >EPIDERMAL GROWTH FACTOR R; SWP:NA; PDB:1QJTA LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDL 100000011000000000000011100000000000000000000 ILGKIWDLADTDGKGVLSKQEFFVALRLVACAQNGLEVSLSSLSL 000000000000110000000000000000000000000000000 AVPPPRFHD 000000001 >HUWENTOXIN-I; SWP:NA; PDB:1QK6A ACKGVFDACTPGKNECCPNRVCSDKHKWCKWKL 110000000001111000000000000000001 >SELENOCOSMIA HUWENA LECTI; SWP:NA; PDB:1QK7A GCLGDKCDYNNGCCSGYVCSRTWKWCVLAGPW 10000012222100000000000000000125 >DNA-DIRECTED RNA POLYMERA; SWP:NA; PDB:1QKLA MSDNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERP 999999999999999999999999987653210000000001223 QANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPL 321101000000000000000000000000000000011000000 LIAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD 0000000000000000000000000000000000000 >TOXIN 7 FROM PANDINUS IMP; SWP:NA; PDB:1QKYA DEAIRCTGTKDCYIPCRYITGCFNSRCINKSCKCYGCT 32110000000000000000001000000000001114 >POSTSYNAPTIC DENSITY PROT; SWP:NA; PDB:1QLCA AEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGA 100000000000000000000000000000000000000000000 AHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVA 000000000000000000000000000000000000000000000 KPSNA 00134 >HERPES SIMPLEX VIRUS PROT; SWP:NA; PDB:1QLOA MSWALEMADTFLDNMRVGPRTYADVRDEINKRGR 9986543233335658866764443223445679 >GROB[5-73]; SWP:NA; PDB:1QNKA TELRCQCLQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKNGQK 110000000000000000000000000000000000000000000 ACLNPASPMVKKIIEKMLKNGKSN 000000000000000000001356 >PROTEIN (ALPHA2D); SWP:NA; PDB:1QP6A GEVEELEKKFKELWKGPRRGEIEELHKKFHELIKG 21000000000000000000000000000000013 >PHOSPHOCARRIER PROTEIN HP; SWP:NA; PDB:1QR5A MEQQSYTIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLK 000000000111111100000000000000000000000000000 SIMGVMSLGVGKDAEITIYADGSDEADAIQAITDVLSKEGLTE 1100000000000000000000000000000000111112222 >PROTEIN (HOMEOBOX VENTRAL; SWP:NA; PDB:1QRYA GSHMSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHL 999999999998654221000000000000000111001000000 TSLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHP 00000000000000000000000001111357999 >PROTEIN KINASE SPK1; SWP:NA; PDB:1QU5A EAETREQKLLHSNNTENVKSSKKKGNGRFLTLKPLPDSIIQESLE 999999999999999999997643210000000000000000000 IQQGVNPFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYE 000000000000000000000000000000000000011244443 SPAQGLDDIWYCHTGTNVSYLNNNRMIQGTKFLLQDGDEIKIIWD 211100000000000000000000000000000000000000000 KNNKFVIGFKVEINDTTGLFNEGLGMLQEQRVVLKQTAEEKDLVK 111000000000000000000011112110000000000000000 KL 01 >PROTEIN KINASE PKR; SWP:NA; PDB:1QU6A GSHMEMAGDLSAGFFMEELNTYRQKQGVVLKYQELPNSGPPHDRR 754333222332211111112212222211111222333444332 FTFQVIIDGREFPEGEGRSKKEAKNAAAKLAVEILNKEKKAVSPL 221111122222111222222211111111112222223334555 LLTTTNSSEGLSMGNYIGLINRIAQKKRLTVNYEQCASGVHGPEG 666777765555543222222222232222111122223333332 FHYKCKMGQKEYSIGTGSTKQEAKQLAAKLAYLQILSEETGSGC 22111112222211112221221111111112222222333444 >HSTX1 TOXIN; SWP:NA; PDB:1QUZA ASCRTPKDCADPCRKETGCPYGKCMNRKCKCNRC 1100000000000000000000000110000011 >Pheromone-binding protein; SWP:NA; PDB:1QWVA SPEIMKNLSNNFGKAMDQCKDELSLPDSVVADLYNFWKDDYVMTD 111010000000000000000000000000100011111110000 RLAGCAINCLATKLDVVDPDGNLHHGNAKDFAMKHGADETMAQQL 000000000000000000111110000000000000000000000 VDIIHGCEKSAPPNDDKCMKTIDVAMCFKKEIHKLNWVPNMDLVI 000000000001111110000000000000000011358999999 GEVLAEV 9999999 >30S RIBOSOMAL PROTEIN S27; SWP:NA; PDB:1QXFA MHSRFVKVKCPDCEHEQVIFDHPSTIVKCIICGRTVAEPTGGKGN 310000000000000000000000000000000000000111100 IKAEIIEYVDQIELEHHHHHH 0000000000001-------- >sulfide dehydrogenase; SWP:NA; PDB:1QXNA ADMGEKFDATFKAQVKAAKADMVMLSPKDAYKLLQENPDITLIDV 210000000000000000000000000000000000000000000 RDPDELKAMGKPDVKNYKHMSRGKLEPLLAKSGLDPEKPVVVFCK 000000000000000000001211000000000000000000011 TAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRSHHHH 222000000000000000000000000000000000000124579 HH 99 >RNA POLYMERASE II; SWP:NA; PDB:1QYP_ GSHMEQDLKTLPTTKITCPKCGNDTAYWWEMQTRAGDEPSTIFYK 876543222100000000000000000000012357642100000 CTKCGHTWRSYE 000000000012 >dematin; SWP:NA; PDB:1QZPA PGLQIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAM 200000000000112322110000000000000000000000000 SPEEFGKLALWKRNELKKKASLF 00000000000000000000000 >Orexin-A; SWP:NA; PDB:1R02A QPLPDCCRQKTCSCRLYELLHGAGNHAAGILTL 000000000000000000000000000000000 >Antigen Ki-67; SWP:NA; PDB:1R21A GSPEFPGGMWPTRRLVTIKRSGVDGPHFPLSLSTCLFGRGIECDI --------5321000000111110000000000000000000000 RIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGSVIDEPVRL 000000000000000000000000000000000000000000000 KHGDVITIIDRSFRYENESLQNGRKSTEFPRKIREQEP 000000000000000000-------------------- >Proline/betaine transport; SWP:NA; PDB:1R48A CGGDNIEQKIDDIDHEIADLQAKRTRLVQQHPR 532100000000000000000000000000001 >RNA polymerase alpha subu; SWP:NA; PDB:1R4GA KPTMHSLRLVIESSPLSRAEKAAYVKSLSKCKTDQEVKAVMELVE 421000000001111111110000000000000000000000000 EDIESLTN 00011235 >Argonaute 1; SWP:NA; PDB:1R4KA GTAFYKAQPVIDFMCEVLDIRDINEQRKPLTDSQRVKFTKEIKGL -00000000000000000000000000000000000000000000 KIEITHCGQMRRKYRVCNVTRRPAQMQSFPLQLENGQTVECTVAK 000000000000000000000000000000000000000000000 YFLDKYRMKLRYPHLPCLQVGQEHKHTYLPLEVCNIVAGQRCIKK 000000000000000000000000000000000000000000000 LTDMQTSTMIKATARSAPDREREINNLVKRADFN 0000000000000000000000000000000000 >conserved hypothetical pr; SWP:NA; PDB:1R57A MSNLEIKQGENKFYIGDDENNALAEITYRFVDNNEINIDHTGVSD 432100000000000011111000000000011000000000011 ELGGQGVGKKLLKAVVEHARENNLKIIASCSFAKHMLEKEDSYQD 223311000000000000000000000000000000000000011 VYLGLEHHHHHH 001234567999 >avirulence protein; SWP:NA; PDB:1R5EA MDNVTSSQLLSVRHQLAESAGLPRDQHEFVSSQAPQSLRNRYNNL -21000000000000000000000000000000000000000000 YSHTQRTLDMADMQHRYMTGASGINPGMLPHENVDDMRSAITDWS 000000000000000111112111121000000000000000000 DMREALQHAMGIHADIVDYKDDDDK 0000000000000112--------- >Gap junction alpha-1 prot; SWP:NA; PDB:1R5SA GPLGSPSKDCGSPKYAYFNGCSSPTAPLSPMSPPGYKLVTGDRNN 999999999999999999999999999999999999999999999 SSCRNYNKQASEQNWANYSAEQNRMGQAGSTISNSHAQPFDFPDD 999999999999999765432222222333445666799877664 NQNAKKVAAGHELQPLAIVDQRPSSRASSRASSRPRPDDLEI 343223344578999999999999999999999999999999 >Genome polyprotein; SWP:NA; PDB:1R6RA MNDQRKKARNTPFNMLKRERNRVSTVQQLTKRFSLGMLQGRGPLK --------------------1000000000011111222110000 LFMALVAFLRFLTIPPTAGILKRWGTIKKSKAINVLRGFRKEIGR 000000000000000000000000000000000000000000000 MLNILNRRRR 0000000011 >50S ribosomal protein L29; SWP:NA; PDB:1R73A MKASELRNYTDEELKNLLEEKKRQLMELRFQLAMGQLKNTSLIKL 310000000000000000000000000000000000011000000 TKRDIARIKTILRERELGIRR 000000000000000001012 >Diacylglycerol kinase, de; SWP:Q16760; PDB:1R79A GSSGSSGTTLASIGKDIIEDADGIAMPHQWLEGNLPVSAKCTVCD 999999999999998654334332100000000000000000000 KTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKCSGPSSG 000011110000000000000000000000000000245 >TypeIII-secreted protein; SWP:Q7CQD4; PDB:1R9KA GNASEGRAVLTSKTVKDFMLQKLNSLDIKGNASKDPAYARQTCEA ----00000000000000000000000000000000000000000 ILSAVYSNNKDQCCKLLISKGVSITPFLKEIGEAAQNAGLPGEIK 000000000000000000000000000000000000000000000 NGVFTPGGAGANPFVVPLIASASIKYPHMFINHNQQVSFKAYAEK 000000000000000000000000000000000000000000000 IVMKEVTPLFNKGTMPTPQQFQLTIENIANKYLQNAS 0000000000000000000000000000000000000 >PROTEIN (RA-DOMAIN OF RAL; SWP:Q12967; PDB:1RAXA GSPHMLSGSGLCNSSSALPLYNQQVGDCCIIRVSLDVDNGNMYKS ----------------------75310000000000122111000 ILVTSQDKAPAVIRKAMDKHNLEEEEPEDYELLQILSDDRKLKIP 000000000000000000000000000000000000010000000 ENANVFYAMNSTANYDFVLKKRTFT 0000000000000000000000123 >conserved hypothetical pr; SWP:Q9X116; PDB:1RDUA MARVAIPSVGKDLSSMVSDRFARAEYFIIYDTESGNVEVVENTIA 100000000000000000000000000000000000000000001 DAHGTGPKVVQSLVSKGVEYLIASNVGRNAFETLKAAGVKVYRFE 112110000000000000000000000000000000000000000 GGTVQEAIDAFSEGRLEELTTFTREG 00000000000000000000012234 >dynein light chain 2; SWP:NA; PDB:1RE6A GPLGSMSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAA 999754210000000000000000000000000000000000000 YIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILL 000000000000000000000000001101000000000000000 FKSG 0002 >GAMMA DELTA-RESOLVASE; SWP:P03012; PDB:1RES GRKRKIDRDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN 0000000000000000000000000000000000000000000 >Probable tRNA modificatio; SWP:P25522; PDB:1RFLA GSLLREGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDV 421110000000000000000000000011111000111100000 LREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRV 000000011011000000000000000000011111110000000 LFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETL 000011001010000000000000000000000111111101001 GMSEVNGHALIRLSARTGEGVDVLRNHLKQSMGIHRD 1111000000000001110000000000000111113 >second splice variant p63; SWP:Q9H3D4; PDB:1RG6A PPPYPTDCSIVSFLARLGCSSCLDYFTTQGLTTIYQIEHYSMDDL ----42100000000000000000000000000000000000000 ASLKIPEQFRHAIWKGILDHRQLHEFAAAS 00000000000000000000000013---- >Piccolo protein; SWP:Q9JKS6; PDB:1RH8A ASHPITGEIQLQINYDLGNLIIHILQARNLVPRDNNGYSDPFVKV 210000000000000000000000000000000111110000000 YLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISM 000011000000000000000000000000000000000000000 EQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYP 000000000000000011100000000000000000000000000 LKEQTES 0000123 >conserved hypothetical pr; SWP:Q9X074; PDB:1RHXA MALVLVKYGTDHPVEKLKIRSAKAEDKIVLIQNGVFWALEELETP 100000000000000000000000000000000000000000000 AKVYAIKDDFLARGYSEEDSKVPLITYSEFIDLLEGEEKFIG 000000000000000000000000000000000000000000 >Hepatoma-derived growth f; SWP:P51858; PDB:1RI0A MHHHHHHAMAMSRSNRQKEYKCGDLVFAKMKGYPHWPARIDEMPE ----------97654221100000000000000000000000001 AAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGKPNKRK 121211210000000000000000000000000000000000000 GFSEGLWEIENNPTVKASGY 00000000000011233456 >FYN-binding protein; SWP:O15117; PDB:1RI9A MGSSHHHHHHSSGKKLKKQEKEEKDFRKKFKYDGEIRVLYSTKVT -------------------10000000000000000000000000 TSITSKKWGTRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVL 000000000000000000000000000000000000000000000 RSYLADNDGEIY 000000------ >E6apn1 peptide; SWP:NA; PDB:1RIJA ALQELLGQWLKDGGPSSGRPPPS 00000000000000000000002 >E6apc1 peptide; SWP:NA; PDB:1RIKA YKFACPECPKRFMRSDHLTLHILLHENKK 10000000000000000000000000135 >E6apc2 peptide; SWP:NA; PDB:1RIMA YKFACPECPKRFMRSDHLSKHITLHELLGEERR 000000000000000000000000000122345 >Tyrosine-protein kinase 6; SWP:Q13882; PDB:1RJAA SEPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVR 310000000000000000000000000000000000100000000 DTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSLSHGL 001000000000000000000000000000000000000011010 RLAAPCRKHE 0000000124 >expressed protein; SWP:Q9FK81; PDB:1RJJA MATSGFKHLVVVKFKEDTKVDEILKGLENLVSQIDTVKSFEWGED 211100000000000000000000000000000000000000000 KESHDMLRQGFTHAFSMTFENKDGYVAFTSHPLHVEFSAAFTAVI 122211110110000000000000000000000000000000000 DKIVLLDFPVAAVKSSVVATP 000000000001223333456 >Small inducible cytokine; SWP:O14625; PDB:1RJTA FPMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITL 999997643333223222111111100112223343321111111 KENKGQRCLNPKSKQARLIIKKVERKNF 2343211111212100000000000235 >Parvalbumin alpha; SWP:P20472; PDB:1RJVA MSMTDLLNAEDIKKAVGAFSATDSFDHKKFFQMVGLKKKSADDVK 201000000000000000000100000000000000000000000 KVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAG 000000000000000000000000000000000000000000000 DKDGDGKIGVDEFSTLVAES 00000000000000000001 >POLYPHEMUSIN I; SWP:P14215; PDB:1RKKA RRWCFRVCYRGFCYRKCR 864210000000001245 >Suppressor of G2 allele o; SWP:Q9Y2Z0; PDB:1RL1A GSHMTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELS -------21000000000000000000110000000000010000 ALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAV 000000110000000000000000000000110000000000000 RWEKLEGQGDVPTPKQFVADVKNL 010100012--------------- >Cytotoxin 1; SWP:P01451; PDB:1RL5A LKCNKLVPIAYKTCPEGKNLCYKMFMMSDLTIPVKRGCIDVCPKN 000000000000000000000000000000000000000000000 SLLVKYVCCNTDRCN 000000000000000 >RLF; SWP:Q61193; PDB:1RLF_ GSSDCRIIRVQMELGEDGSVYKSILVTSQDKAPSVISRVLKKNNR 421000000000000000000000000000000000000000000 DSAVASEFELVQLLPGDRELTIPHSANVFYAMDGASHDFLLRQRR 000000000000000000000000000000000000000000000 >Transcription initiation; SWP:Q00403; PDB:1RLYA MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRV -99877654432110111110000001111000000000000123 IDVGSEWRTFSNDKA 45678889999999- >Mu-O-conotoxin MrVIB; SWP:Q26443; PDB:1RMKA ACSKKWEYCIVPILGFVYCCPGLICGPFVCV 0000000112235532100000000111100 >CHIMERIC PROTEIN OF INTER; SWP:P10145; PDB:1RODA SAKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSD 987654443221222212122110101223444332211000123 GRELCLDPASPIVKKIIEKMLNSDKSN 211111223322111000011012123 >FERREDOXIN; SWP:P0A3C9; PDB:1ROE_ ATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGAC 000000000000000000000000000000000001111111111 STCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILT 110100000000001111110110001001000000000000000 NQEEELY 0001112 >FERREDOXIN; SWP:P46797; PDB:1ROF_ MKVRVDADACIGCGVCENLCPDVFQLGDDGKAKVLQPETDLPCAK 000000000000000000000000111111000000000000000 DAADSCPTGAISVEE 000000000000001 >Tricyclic peptide RP 7195; SWP:P37046; PDB:1RPB_ CLGIGSCNDFAGCGYAVVCFW 000000000000000000000 >HIV-1 REV PROTEIN; SWP:P04619; PDB:1RPV_ TRQARRNRARRWRARQR 34200000000000013 >30S ribosomal protein S17; SWP:O26894; PDB:1RQ6A MGNIRTSFVKRIAKEMIETHPGKFTDDFDTNKKLVEEFSTVSTKH 876421100000000011222211110000000001111212211 LRNKIAGYITRIISQQK 00000000000000011 >conserved hypothetical pr; SWP:Q99TQ4; PDB:1RQ8A MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENREL 100000000000000000010000100000000000000000000 IKVHVLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYRESKEN 000000000000000000000000000000000000000001112 KEIELPLEHHHHHH 110011-------- >Glycogen synthesis protei; SWP:P26649; PDB:1RRZA MGSSHHHHHHSSGLVPRGSHMDHSLNSLNNFDFLARSFARMHAEG --------------------4311100000000000000000000 RPVDILAVTGNMDEEHRTWFCARYAWYCQQMMQARELELEH 00000000001110000000000000000000001355456 >ATP-dependent DNA helicas; SWP:P13010; PDB:1RW2A MHHHHHHKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRVLVK 999999999999999999999999999864332100000000000 QKKASFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIK 000000000000000000000000000000000000000000000 FSEEQRFNNFLKALQEKVEIKQLNHFWEIVVQDGITLITKEEASG 000000000000000000000000000000000000000110001 SSVTAEEAKKFLAPKDK 11111100000012234 >hypothetical protein PF10; SWP:Q8U1Z3; PDB:1RWSA AHHHHHHGSKMIKVKVIGRNIEKEIEWREGMKVRDILRAVGFNTE ---------000000000000000000000000000000000000 SAIAKVNGKVVLEDDEVKDGDFVEVIPVVSGG 00000000000000000000000000000000 >Hypothetical UPF0250 prot; SWP:P0A8J4; PDB:1RWUA MGTSHHHHHHSSGRENLYFQGHMKTKLNELLEFPTPFTYKVMGQA ----------------------98765422211000000000000 LPELVDQVVEVVQRHAPGDYTPTVKPSSKGNYHSVSITINATHIE 000000000000000010000000000111000000000000000 QVETLYEELGKIDIVRMVL 0000000000000000001 >Afimbrial adhesin AFA-III; SWP:Q57254; PDB:1RXLA HHHHHHGLVPRGSEECQVRVGDLTVAKTRGQLTDAAPIGPVTVQA -------------31000000000000000000000000000000 LGCNARQVALKADTDNFEQGKFFLISDNNRDKLYVNIRPMDNSAW 011000000000000000000000001110000000000111000 TTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGYWA 000000000000000000000000100100000000000000000 KDNKQGFTPSGTTGTTKLTVT 000000000000000000001 >unknown; SWP:O27775; PDB:1RYJA MVIGMKFTVITDDGKKILESGAPRRIKDVLGELEIPIETVVVKKN 211000000001000000000000000000000000000000000 GQIVIDEEEIFDGDIIEVIRVIYGG 0000000000000000000011234 >Protein yjbJ; SWP:P68206; PDB:1RYKA MNKDEAGGNWKQFKGKVKEQWGKLTDDDMTIIEGKRDQLVGKIQE 432221111000000000000000000000000000000000000 RYGYQKDQAEKEVVDWETRNEYRW 000000000000000000000012 >SWI/SNF-related, matrix-a; SWP:O14497; PDB:1RYUA SSTTTNEKITKLYELGGEPERKMWVDRYLAFTEEKAMGMTNLPAV 320000000000111110000000000000000000110000000 GRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAA 000000000000000000000000000000000000000010000 SSLKKQYIQCLYAFECKIERGEDPPPDIFA 000000000000000100122334589999 >Regulatory protein cro; SWP:P09964; PDB:1RZSA MYKKDVIDHFGTQRAVAKALGISDAAVSQWKEVIPEKDAYRLEIV 000000000000000000000000000000000000000000000 TAGALKYQENAYRQAA 0000000000000246 >Protein AF2095(GR4); SWP:O28185; PDB:1RZWA MTLKQVIVVRDDLKLSRGKLAVQVAHAAIIGYLKSDSSLRRKWLD 000000000000000000000000000000000000000000000 EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLTEVPPGT 000000000000000000000000000000000000000000000 ITAVVIGPDEERKIDKVTGNLPLLKLEHHHHHH 000000000000000000000000000000000 >hypothetical protein PF04; SWP:Q8U3L1; PDB:1S04A MEWEMGLQEEFLELIKLRKKKIEGRLYDEKRRQIKPGDVISFEGG 100000000000000000000000000000000000000000000 KLKVRVKAIRVYNSFREMLEKEGLENVLPGVKSIEEGIQVYRRFY 000000000000000000000000000000000000000000000 DEEKEKKYGVVAIEIEPLEY 00000000000000000011 >Nephrocystin 1; SWP:O15259; PDB:1S1NA GSESHKWSTGEEYIAVGDFTAQQVGDLTFKKGEILLVIEKKPDGW --------2000000000000111000000000000000000000 WIAKDAKGNEGLVPRTYLEPYSE 00000000000000000000012 >Rubredoxin 2; SWP:P00272; PDB:1S24A PTSLEKLPSADVKGQDLYKTQPPRSDAQGGKAYLKWICITCGHIY -------------------------------10000000000000 DEALGDEAEGFTPGTRFEDIPDDWCCPDCGATKEDYVLYEEK 000000011000000000001110000111000000000134 >NADH-ubiquinone oxidoredu; SWP:O43678; PDB:1S3AA KAGMAAAAASRGVGAKLGLREIRIHLCQRSPGSQGVRDFIEKRYV -----------------0000000001100110000000000000 ELKKANPDLPILIRECSDVQPKLWARYAFGQETNVPLNNFSADQV 000000000000000111000000000000000000000000000 TRALENVLSGKA 000000000001 >Integrin beta-3; SWP:P05106; PDB:1S4XA GSSHHHHHHSSGLVPRGSHMKLLITIHDRKEFAKFEEERARAKWD --------------------1100000000000000000011111 TANNPLYKEATSTFTNITYRGT 1111100000001111222335 >high mobility group box t; SWP:Q8R316; PDB:1S5RA DFTPMDSSAVYVLSSMARQRRAS ----------------------- >Albumin 8; SWP:P23110; PDB:1S6DA PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREE 999997531000000000000000000000001356889999753 DHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNL 111000000000000000000000000000000000000000000 PIECNLMSQPCQM 0000000000012 >Calcium-dependent protein; SWP:P28583; PDB:1S6IA AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELME 999999887643333244457888653446435656889999876 SEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSY 553333345446655443445434545666788765544332333 FDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDY 234667542334324545788877776545434544665422244 GEFAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDNGSNQVIEGY 543565689999999977899999999999999999999999999 FKHHHHHH 99------ >Alkylmercury lyase; SWP:P77072; PDB:1S6LA MKLAPYILELLTSVNRTNGTADLLVPLLRELAKGRPVSRTTLAGI --------------------6422111111111100000000000 LDWPAERVAAVLEQATSTEYDKDGNIIGYGLTLRETSYVFEIDDR 000000111111111111111110111222111111000000111 RLYAWCALDTLIFPALIGRTARVSSHCAATGAPVSLTVSPSEIQA 100000000011000110000000000000000000000000000 VEPAGMAVSLVLPQEAADVRQSFCCHVHFFASVPTAEDWASKHQG 000000000012346655554333321000000000000011111 LEGLAIVSVHEAFGLGQEFNRHLLQTMSSRTP 22210000000000000001112234679999 >envelope glycoprotein; SWP:Q913C7; PDB:1S6NA ISEFQLKGTTYGVCSKAFKFLGTPADTGHGTVVLELQYTGTDGPC 111111111100000000000000000000000000000000000 KVPISSVASLNDLTPVGRLVTVNPFVSVATANAKVLIELEPPFGD 000000000000000000000000000000000000000000000 SYIVVGRGEQQINHHWHKSGSSIGK 0000000000000000001111111 >Hepcidin; SWP:P82951; PDB:1S6WA GCRFCCNCCPNMSGCGVCCRF 000000011111100000001 >KvAP CHANNEL; SWP:P60980; PDB:1S6XA ECGKFMWKCKNSNDCCKDLVCSSRWKWCVLASPF 1000000000000000000000000000001356 >Hepatocyte nuclear factor; SWP:O08755; PDB:1S7EA EINTKEVAQRITTELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPK 432222111111222223322332223222332211122223343 PWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAACKRKEQEHGKD 444333333221211121123445434434444566554443333 RGNTPKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLE 333333333322233222212222333223333223322333332 LSTVSNFFMNAR 221122234444 >Toxin BmKK4; SWP:Q95NJ8; PDB:1S8KA TQCQSVRDCQQYCLTPDRCSYGTCYCKTT 00000000000000000000000000013 >copper chaperone ScAtx1; SWP:P73213; PDB:1SB6A MTIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITS 100000000011100000000000000000000000000000000 ALGEEQLRTAIASAGHEVE 0000000000000000001 >SCORPION TOXIN OSK1; SWP:P55896; PDB:1SCO_ GVIINVKCKISRQCLEPCKKAGMRFGKCMNGKCHCTPK 00000000000000000000000000000000000000 >SCYLLATOXIN; SWP:P16341; PDB:1SCY_ AFCNLRMCQLSCRSLGLLGKCIGDKCECVKH 3100000000000000000000100000002 >ubiquitin family; SWP:Q9MAB9; PDB:1SE9A MGHHHHHHLEAEVHNQLEIKFRLTDGSDIGPKAFPDATTVSALKE ---------765321000000000000000000000000000000 TVISEWPREKENGPKTVKEVKLISAGKVLENSKTVKDYRSPVSNL 000000111112111000000000000000000000111223333 AGAVTTMHVIIQAPVTEKEKKPKGDPKMNKCVCSVM 32100000000011234567---------------- >orf, hypothetical protein; SWP:NA; PDB:1SG5A MSMNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASDL 975421100000000000000000000000000000000000000 VSRKNVEYLVVEAAGETRELRLDKITSFSHPEIGTVVVSES 00000000000001000000000000000000000000122 >Putative Cation transport; SWP:P0AE63; PDB:1SG7A MGSSHHHHHHHHSSGFNPRGSPYKTKSDLPESVKHVLPSHAQDIY ---------------------000000000000000000000000 KEAFNSAWDQYKDKEDRRDDASREETAHKVAWAAVKHEYAKGDDD 000000000000001210000000000000000000000000010 KWHKKS 000000 >EPHRIN TYPE-B RECEPTOR 2; SWP:P28693; PDB:1SGG_ YTSFNTVDEWLDAIKMSQYKESFASAGFTTFDIVSQMTVEDILRV 000000000000000000000000000000000000000000000 GVTLAGHQKKILNSIQVMRAQM 0000000000000000000000 >Protein C14orf129; SWP:Q9P0R6; PDB:1SGOA METDCNPMELSSMSGFEEGSELNGFEGTDMKDMRLEAEAVVNDVL 999999999999999999999999986432110110011001101 FAVNNMFVSKSLRCADDVAYINVETKERNRYCLELTEAGLKVVGY 100100011111111100000000011100000000000000111 AFDQVDDHLQTPYHETVYSLLDTLSPAYREAFGNALLQRLEALKR 111111221111101000000000011111111111111112233 DGQS 4569 >TRYPSIN INHIBITOR; SWP:P31713; PDB:1SHP_ SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFET 100000000111100000000000000000000011110000000 LHQCRAICRA 0000000012 >SCORPION INSECTOTOXIN I5A; SWP:P15222; PDB:1SIS_ MCMPCFTTDPNMAKKCRDCCGGNGKCFGPQCLCNR 00000000000000000000000000000000012 >Nonspecific lipid-transfe; SWP:P83434; PDB:1SIYA MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRR 110000000000000000111100000000000000001000000 AVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 000000000011111111100000000000001111111110111 N 2 >SH3 domain-binding glutam; SWP:Q9H299; PDB:1SJ6A MSGLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNA 321000000011110000000000000000000000000000000 LRDEMRALAGNPKATPPQIVNGDQYCGDYELFVEAVEQNTLQEFL 000000000000000000000100000000000000000000000 KLALEHHHHHH 01134------ >Major prion protein 2; SWP:P10279; PDB:1SKHA MVKSKIGSWILVLFVAMWSDVGLCKKRPKP 865311100000000000000122345799 >recombinant Ib pronapin; SWP:Q8GT96; PDB:1SM7A QPQKCQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLR 421000100000000000000001112223456654444421100 EQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAK 000000000000000000000000001234433210000000000 NLPNVCNMKQIGTCPFIAI 0000000001011111111 >Transportan in bicellar s; SWP:NA; PDB:1SMZA GWTLNSAGYLLGKINLKALAALAKKIL 542222222123212111110011112 >Nucleobindin 1; SWP:Q02818; PDB:1SNLA GSHMLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEAL ----99999999987665310000000000000000000000000 FTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVT 000000001112333221110000000000000000000000000 LEEFLASTQRKEF 0000000012456 >Cytochrome C oxidase asse; SWP:Q92RG6; PDB:1SO9A MVPLYDMFCRVTGYNGTTQRVEQASDLILDEKIKVTFDANVAAGL --------------------1111111011000000000000100 PWEFVPVQRDIDVRIGETVQIMYRAKNLASTPTTGQATFNVTPMA 000000000000000000000000000000000001000000000 AGAYFNKVQCFCFTETTLEPGEEMEMPVVFFVDPEIVKPVETQGI 000001123333221000000000000000000000011110100 KTLTLSYTFYPREPSKPVAQVKAKAENKL 0000000000000110------------- >5,10-methenyltetrahydrofo; SWP:O67621; PDB:1SOUA MLKSELRKKVLHKRINLSEEERRRLSEKVISNLKSLPEFKKSKKV 311100000000000000000000000000000000000000000 ALYCPIKGEVDLTPLFPEVLKEKELILPKVEGNEISLYRVHSPAC 000001111000000000000000000001111100000000111 LGVGAFGIMEPVEGERVNPEDVDFIAVPGVAFDLEGYRLGFGKGY 111111111001100000000000000001000010011112221 YDRLLKRVKGLKVGVAYSFQVFERLPRDAWDIPVDVLVTEKNVRR 111000000000000000000001011221100000000000000 LRDGRSLEHHHHHH 11346789999999 >RIKEN cDNA 1300006M19; SWP:Q9DBJ3; PDB:1SPKA GSSGSSGQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWL 654321000000000001111100000000000000000000000 YGEHDTTKARGWFPSSYTKLLSGPSSG 000000000000000000000012457 >dh434; SWP:P16117; PDB:1SQ8A MLMGERIRARRIQLGLNQAELAQKVGVDQQAIEQLENGKAKRPRF 100000000000000000000000000000000000000000000 LPELARALGVAVDWLLNGA 0000000000000000001 >50S ribosomal protein L35; SWP:Q8TZV6; PDB:1SQRA MRIKGVVLSYRRSKENQHNNVMIIKPLDVNSREEASKLIGRLVLW 100000000001133343100000000000000000000000000 KSPSGKILKGKIVRVHGTKGAVRARFEKGLPGQALGDYVEIVLEH 011211000000000001000000001111111000000000--- HHHHH ----- >Putative sensor-like hist; SWP:P39838; PDB:1SR2A MQEAVLQLIEVQLAQEEVTESPLGGDENAQLHASGYYALFVDTVP 999999999999999999976432110000000000000000000 DDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCETLE 000000000000000000000000000000000000000000000 HLIREKDVPGIEKYISDIDSYVKSLL 00000000000000000000000000 >APO-CCME; SWP:P69490; PDB:1SR3A LRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRD 654322110001111111122222111211110000011111111 PNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGN 211110000000111000000111111111111000011111111 HILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPASHHHHH 000011111122232223344567--------------------- H - >Sarafotoxins precursor; SWP:P13208; PDB:1SRB_ CSCKDMTDKECLYFCHQDVIW 111110000000000013457 >Zinc finger protein ZFPM1; SWP:O35615; PDB:1SRKA GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS 43211000000000000000000000000011246 >PNPASE; SWP:P05055; PDB:1SRO_ AEIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEK 332110000000000000000000012100000000000111000 VTDYLQMGQEVPVKVLEVDRQGRIRLSIKEA 0000000000000000012332100000014 >Gamma-aminobutyric acid t; SWP:Q9Z0U4; PDB:1SRZA EAEFVRICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHL 865321100000000000000001111100100000000000000 VGSSRSVCSQGQWSTPKPHCQVN 00000000100000000000000 >Pollen allergen Ole e 6; SWP:O24172; PDB:1SS3A DEAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKLEN 210000000000000000000000000000000012358999999 YKPKN 99999 >NSFL1 cofactor p47; SWP:Q9UNZ2; PDB:1SS6A GSEKRQHSSQDVHVVLKLWKSGFSLDNGELRSYQDPSNAQFLESI 999875432211000000000000000000000000000000000 RRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQ 000000000001122100000000000000112222332334554 KLGSTAPQVLST 679999999999 >Hepatocyte growth factor; SWP:P08581; PDB:1SSLA GSAMGCRHFQSCSQCLSAPPFVQCGWCHDKCVRSEECLSGTWTQQ 874200000000000000000000000000000000011100000 ICL 001 >Pulmonary surfactant-asso; SWP:P07988; PDB:1SSZA CWLCRALIKRIQAMIPKGGRMLPQLVCRLVLRCS 0000000000000000000000000000000001 >Acyl-CoA-binding protein; SWP:P31787; PDB:1ST7A VSQLFEEKAKAVNELPTKPSTDELLELYALYKQATVGDNDKEKPG 000000000000000000000000000000000000000000001 IFNMKDRYKWEAWENLKGKSQEDAEKEYIALVDQLIAKYSS 11110000000000000000000000000000000000001 >Serotransferrin, C-lobe; SWP:P02786; PDB:1SUVE PDPLQDECKAVKWCALGHHERLKCDEWSVTSGGLIECESAETPED 678888898779999999998777666667777889999999999 CIAKIMNGEADAMSLDGGYVYIAGQCGLVPVLAENYESTDCKKAP 999989999999898989999999899775421246632345344 EEGYLSVAVVKKSNPDINWNNLEGKKSCHTAVDRTAGWNIPMGLL 333235668999999999889999999999999989998999999 YNRINHCRFDEFFRQGCAPGSQKNSSLCELCVGPSVCAPNNREGY 999999998999899988899999999775677887567679766 YGYTGAFRCLVEKGDVAFVKSQTVLQNTGGRNSEPWAKDLKEEDF 755466454222124455668889999999999999999999997 ELLCLDGTRKPVSEAHNCHLAKAPNHAVVSRKDKAACVKQKLLDL 799999999999999999999999999999999999999999999 QVEFGNTVADCSSKFCMFHSKTKDLLFRDDTKCLVDLRGKNTYEK 999999999999999999999999999999999999999999999 YLGADYIKAVSNLRKCSTSRLLEACTFHKH 999999999787778999999999999999 >GA repeat binding protein; SWP:Q00422; PDB:1SXDA GSHMAALEGYRKEQERLGIPYDPIHWSTDQVLHWVVWVMKEFSMT 421000000000000000000000000000000000000000001 DIDLTTLNISGRELCSLNQEDFFQRVPRGEILWSHLELLRKYVLA 000000000000000000000000000000000000000000024 S 3 >Transcriptional regulator; SWP:P11308; PDB:1SXEA GSHMEEKHMPPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKE 999865322222112122211100000000000000000000000 YGLPDVNILLFQNIDGKELCKMTKDDFQRLTPSYNADILLSHLHY 000000000000000000000000000000001000000000000 LRETPLP 0000012 >NOXIUSTOXIN; SWP:P08815; PDB:1SXM_ TIINVKCTSPKQCSKPCKELYGSSAGAKCMNGKCKCYNN 000000000000000000000000000000000000001 >F-spondin; SWP:P35446; PDB:1SZLA GSETCIYSNWSPWSACSSSTCEKGKRMRQRMLKAQLDLSVPCPDT 210000000000000000000000000000000000000000000 QDFQPCMGPGCSDEDG 0000000011123567 >cytochrome b5 domain-cont; SWP:NA; PDB:1T0GA MGHHHHHHLEEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKS 666544321000000000000011111000000000000000000 FYGSGGDYSMFAGKDASRALGKMSKNEEDVSPSLEGLTEKEINTL 001111100001000000000000000100011111100000000 NDWETKFEAKYPVVGRVVS 0000000000000000001 >tubulin folding cofactor; SWP:Q20728; PDB:1T0YA GSMTEVYDLEITTNATDFPMEKKYPAGMSLNDLKKKLELVVGTTV --2100000000000010000000000000000000000000000 DSMRIQLFDGDDQLKGELTDGAKSLKDLGVRDGYRIHAVDVTGGN 000000001121000000100000000000000000000001122 EDFKDESMVEKYEMSDDTYGKRTDSVRAWKKK 35------------------------------ >NONSPECIFIC LIPID-TRANSFE; SWP:Q42952; PDB:1T12A AITCGQVTSNLAPCLAYLRNTGPLGRCCGGVKALVNSARTTEDRQ 200000000000000000000000000000000000000000000 IACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV 000000000000000000000000000000001000000001111 Q 2 >conserved hypothetical pr; SWP:Q9A7I7; PDB:1T17A MHRHVVTKVLPYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVD 100000000000000000000000000111000000000000000 GAVSTVDAEAQVGFSFLREKFATRVRRDKDARSIDVSLLYGPFKR 000000000000000000000000000000000000000001110 LNNGWRFMPEGDATRVEFVIEFAFKSALLDAMLAANVDRAAGKLI 000000000000000000000000000000000000000000000 ACFEARAQQLHGA 0000000000002 >armadillo repeat containi; SWP:Q8VZ40; PDB:1T1HA GSPEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKT 432212110000000000000000000000000000000000100 CPKSQETLLHAGLTPNYVLKSLIALWCESNGIE 000111011000000000000000000000111 >Kurtoxin; SWP:P58910; PDB:1T1TA KIDGYPVDYWNCKRICWYNNKYCNDLCKGLKADSGYCWGWTLSCY 000000011111110000000000000000000000001110000 CQGLPDNARIKRSGRCRA 000000000011122222 >Chromosomal protein MC1; SWP:P12770; PDB:1T23A SNTRNFVLRDEDGNEHGVFTGKQPRQAALKAANRGSGTKANPDII 210000000000000000000000000000000000000000000 RLRERGTKKVHVFKAWKEIVDAPKNRPAWMPEKISKPFVKKERIE 000111000000000000000000000000000000000000000 KLE 135 >AF-6 protein; SWP:P55196; PDB:1T2MA MKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAA 432100000000010010000000001111000000000000000 DVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAK 000000000000000000000000000000000000000000000 QGALEHHHHHH 112-------- >Metallothionein; SWP:P02807; PDB:1T2YA GDCGCSGASSCNCGSGCSCSNCGSK 0000000000000000000000000 >Dual-specificity tyrosine; SWP:Q8GY31; PDB:1T3KA MGSSHHHHHHSSGLVPRGSHMAMARSISYITSTQLLPLHRRPNIA --------------------2223221111111111222212100 IIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQNVKDKDTLVF 000111112332222111111112211111111111211110000 HSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEAS 122232111100000001011111221111000011111111122 GKPVCRCAEVPCKGDCA 22222223333222256 >Carbon storage regulator; SWP:NA; PDB:1T3OA MGHHHHHHHHHHSSGHIEGRHMLVLSRKINEAIQIGADIEVKVIA -----------8776432100000000000000000000000000 VEGDQVKLGIDAPKHIDIHRKEIYLTIQEENNRAAALSSDVISAL 000000000000000000011100000000001112344345689 SSQKK 89999 >Attractin; SWP:O96910; PDB:1T50A DQNCDIGNITSQCQMQHKNCEDANGCDTIIEECKTSMVERCQNQE 421111000000000000110011110000000000000000000 FESAAGSTTLGPQ 1124678899999 >BBA5; SWP:NA; PDB:1T8JA YRVSYDFSRSDELAKLLRQHAG ---0000000000000000000 >carnobacteriocin B2 immun; SWP:P38582; PDB:1TDPA MDIKSQTLYLNLSEAYKDPEVKANEFLSKLVVQCAGKLTASNSEN 100000000000000000000000000000000000000000000 SYIEVISLLSRGISSYYLSHKRIIPSSMLTIYTQIQKDIKNGNID 000000000000011122333211100000000000000000000 TEKLRKYEIAKGLMSVPYIYF 000000000001111232123 >conserved protein MTH187; SWP:O26289; PDB:1TE4A MGSSHHHHHHSSGLVPRGSHMADENKWVRRDVSTALSRMGDEAFE --------------------9998776567865321222111000 PLLESLSNEDWRIRGAAAWIIGNFQDERAVEPLIKLLEDDSGFVR 000000001000000000000001000000000000000000000 SGAARSLEQIGGERVRAAMEKLAETGTGFARKVAVNYLETH 00000000000000000000000000000000000000011 >Hypothetical UPF0267 prot; SWP:P67603; PDB:1TE7A MQPNDITFFQRFQDDILAGRKTITIRDESESHFKTGDVLRVGRFE 321000000000000000100000000000111000000000011 DDGYFCTIEVTATSTVTLDTLTEKHAEQENMTLTELKKVIADIYP 111100000000000000000000000000000000000000000 GQTQFYVIEFKCL 0000000000001 >TERTIAPIN; SWP:P56587; PDB:1TER_ ALCNCNRIIIPHMCWKKCGKK 210001111000000000000 >TRANSCRIPTIONAL ELONGATIO; SWP:P23193; PDB:1TFI_ KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGN 764110100000000000000000013544543100000000000 RWKFC 00012 >TOXIN FS2; SWP:P01414; PDB:1TFS_ RICYSHKASLPRATKTCVENTCYKMFIRTHREYISERGCGCPTAM 000011234432100000000000000000000000000100111 WPYQTECCKGDRCNK 100000000000001 >NifU1; SWP:Q84LK7; PDB:1TH5A MLELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKVRLTGP 100000000000000000000111110000000000000000000 AAVVRTVRIAVSKKLREKIPSIQIVQLLS 01111000000000000000000000001 >thioredoxin H; SWP:Q8S3L3; PDB:1TI3A AEEGQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIA 100000000000000000000000000000000000000000000 PIFAELAKKFPNVTFLKVDVDELKAVAEEWNVEAMPTFIFLKDGK 000000000000000000000000000000000000000000000 LVDKTVGADKDGLPTLVAKHATA 00000000000000000000001 >plant defensin; SWP:Q6T418; PDB:1TI5A RTCMIKKEGWGKCLIDTTCAHSCKNRGYIGGNCKGMTRTCYCLVN 000000000000000000000000000000000010000000000 C 0 >calmodulin-related protei; SWP:Q9SRP5; PDB:1TIZA SSAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEE 100000000000000000000000000000000000000000000 IDVDGNGELNADEFTSCIEKML 0000000000000000000000 >CG4244-PB; SWP:Q9Y0H4; PDB:1TK7A GSPEFHMDALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQ 999999999999999975446799964235899998745433577 GQEVSLINEGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRP 8877877886543332133557775322246787554456668 >Hypothetical protein MG35; SWP:P47596; PDB:1TM9A MEQNNIKEQLISFFNQACSTHQERLDFICSTRESDTFSSVDVPLE 653211000000000001111000000000000111111010000 PIKNIIEITKDENQQIEITKIAVNNIKTLSSVGATGQYMASFFST 000000000000000000000000000000112333200000000 NSEPAIIFCVIYFLYHFGFLKDNNKKQIIKKAYETIADNIADYLN 000000000000000011001122332000000000000000001 EN 34 >TMZIP; SWP:P04692; PDB:1TMZA MDAIKKKMQMLKLDNYHLENEVARLKKLVGER 00000000000000000000000000000011 >MU-TRANSPOSASE; SWP:P07636; PDB:1TNS_ MELWVSPKELANLPGLPKTSAGVIYVAKKQGWQNRTRAGVKGGKA 000000000000000000000000000000000000000000000 IEYNANSLPVEAKAALLLRQGEIETSLGYFE 0000000000000000000000000000000 >CREB-binding protein; SWP:P45481; PDB:1TOTA GQDRFVYTCNECKHHVETRWHCTVCEDYDLCINCYNTKSHTHKMV 000000000000000000000000000000000000000000000 KWGLGLD 0000001 >Neurogenic locus notch ho; SWP:P46531; PDB:1TOZA QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNE 322211111111111111112222221111121111221111111 CVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCL 122222222221111111112222332222222333333444446 HNGRCLDKINEFQCECPTGFTGHLCQ 76543221122234568999999999 >T-PLASMINOGEN ACTIVATOR F; SWP:P00750; PDB:1TPG_ SYQVICRDEKTQMIYQQHQSWLRPVLRSNRVEYCWCNSGRAQCHS 000000000000000000000000000000000000000000000 VPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 000000000000000000000000000000000000000000000 T 0 >senescence-associated fam; SWP:Q39129; PDB:1TQ1A MGHHHHHHLEAEESRVPSSVSVTVAHDLLLAGHRYLDVRTPEEFS ----------53321000000000000001000000000011111 QGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQ 111111000111357999985323222222221100000000000 SGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA 111011000110011110000000111111122111234 >NECAP1; SWP:Q9CR95; PDB:1TQZA MAAELEYESVLCVKPDVSVYRIPPRASNRGYRASDWKLDQPDWTG 999753210000000000000112333332101100001110000 RLRITSKGKIAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSR 000000000000000001011110000000000000000001110 YFVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQE 0000000000000000000000000000000000000013457 >TS KAPA; SWP:P56219; PDB:1TSK_ VVIGQRCYRSPDCYSACKKLVGKATGKCTNGRCDC 00000000000000000000000000000000000 >dendritic cell-derived ub; SWP:Q8WUN7; PDB:1TTNA MIEEKSDIETLDIPEPPPNSGYECQLRLRLSTGKDLKLVVRSTDT --------------------5310000000021000000000000 VFHMKRRLHAAEGVEPGSQRWFFSGRPLTDKMKFEELKIPKDYVV 000000000000001100000000000000000000000110000 QVIVSQPVQNPTPVEN 0000112335------ >Oncomodulin; SWP:P32930; PDB:1TTXA MSITDVLSADDIAAALQECRDPDTFEPQKFFQTSGLSKMSANQVK 210000000000000000000000000000000000000000000 DVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAA 000000000000000000000000001100000000000000000 DNDGDGKIGAEEFQEMVHS 0000000000000000001 >RNA polymerase sigma fact; SWP:P77994; PDB:1TTYA KEAMRMLMREELEKVLKTLSPREAMVLRMRYGLLDGKPKTLEEVG 987554321000000000000000000000000000000000000 QYFNVTRERIRQIEVKALRKLRHPSRSKYLKSLLSLMDENEG 000000000000000000001134421000000011122568 >Apocytochrome f; SWP:Q93SW9; PDB:1TU2B YPFWAQQTYPETPREPTGRIVCANCHLAAKPTEVEVPQSVLPDTV 565467999999999999753332432356799999999999999 FKAVVKIPYDTSVQQVGADGSKVGLNVGAVLMLPEGFKIAPEDRI 655665658999777789864124456667999999898999999 PEELKEEIGDVYFQPYGEDKDNIVIVGPLPGEQYQEIVFPVLSPN 998667668999989------------------------------ PANDKNIHFGKYSVHVGGNRGRGQVYPTGEKSNNNLYSAAATGTI --------------------------------------------- SKIAKQEGEDGSVKYLVDIKTESGEVVSDTIPAGPELIVSEGQAV --------------------------------------------- TAGDALTNNPNVGGFGQLDAEIVLQDANR ----------------------------- >odorant binding protein A; SWP:Q9U9J5; PDB:1TUJA IDQDTVVAKYMEYLMPDIMPCADELHISEDIATNIQAAKNGADMS 110000000000000000000001111111112343332111100 QLGCLKACVMKRIEMLKGTELYVEPVYKMIEVVHAGNADDIQLVK 000000000000000001000000000000000000000000000 GIANECIENAKGETDECNIGNKYTDCYIEKLFS 000000000011100000000000000000001 >diacylglycerol kinase alp; SWP:O95217; PDB:1TUZA MAKERGLISPSDFAQLQKYMEYSTKKVSDVLKLFEDGEMAKYVQG 765443110000000000000000000000000000000000001 DAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVT 000000000000000000000000000000001112334434322 KDVVCLNDVSCYFSLLEGGRPEDKLEWS 1000000000000000013579999999 >Cryptdin-4; SWP:P28311; PDB:1TV0A GLLCYCRKGHCKRGERVRGTCGIRFLYCCPRR 32000000000000000000000000000113 >METHANE MONOOXYGENASE COM; SWP:P22868; PDB:1TVCA CRISFGEVGSFEAEVVGLNWVSSNTVQFLLQKRPDECGNRGVKFE 999874321110000010000000000000011334333221221 PGQFMDLTIPGTDVSRSYSPANLPNPEGRLEFLIRVLPEGRFSDY 111000001111111000000111121100000000011110000 LRNDARVGQVLSVKGPLGVFGLKERGMAPRYFVAGGTGLAPVVSM 101111111000000111110001110000000000000000000 VRQMQEWTAPNETRIYFGVNTEPELFYIDELKSLERSMRNLTVKA 000111121100000000000011000010000011110000000 CVWHPSGDWEGEQGSPIDALREDLESSDANPDIYLCGPPGMIDAA 000001000000001100000000111100000000011000000 CELVRSRGIPGEQVFFEKFLPSGAA 0000111111121000000001123 >Hypothetical UPF0054 prot; SWP:Q9X1J7; PDB:1TVIA MGTSHHHHHHSSGRENLYFQGHMIRILGEGKGSKLLENLKEKLEE ----------------------10000000000000000000000 IVKKEIGDVHVNVILVSEDEIKELNQQFRGQDRPTDVLTFPLMEE 000001100000000000000000000000000010000001112 DVYGEIYVCPLIVEENAREFNNTFEKELLEVVIHGILHLAGYDHE 110000000000000000000000000000000000000011332 FEDKNSKEMFEKQKKYVEEVWGEWRSNPSEDSDPGKR 2333311100000000000000000000124568999 >Cofilin; SWP:P21566; PDB:1TVJA MASGVTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKK 421000000000000000000000000000000000000000000 QIIVEEAKQILVGDIGDTVEDPYTAFVKLLPLNDCRYALYDATYE 000000000000000000000000000000000000000000000 TKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKHEW 000000000000000000000000000000000000000000000 QVNGLDDIKDRSTLGEKLGGNVVVSLEGKPL 0000000000000000000000000000000 >PTS system, galactitol-sp; SWP:P0A437; PDB:1TVMA MGSSHHHHHHHHENLYFQGSKRKIIVACGGAVATSTMAAEEIKEL 999999999999999754210000000122221000000000000 CQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIPLVH 000000000000000000000000000000012222211000000 GMPFVSGVGIEALQNKILTILQG 00000000000000000000001 >TRANSACTIVATOR PROTEIN; SWP:NA; PDB:1TVS_ LEDRRIPGTAEENLQKSSGGVPGQNTGGQEARPNYHCQLCFLRSL 999998877888889999999998999889976667654543444 GIDYLDASLRKKNKQRLKAIQQGRQPQYLL 533221233354354345445578999999 >MAUROTOXIN; SWP:P80719; PDB:1TXM_ VSCTGSKDCYAPCRKQTGCPNAKCINKSCKCYGC 0000000000000000000000000000000001 >Heterogeneous Nuclear Rib; SWP:P07910; PDB:1TXPA IQAIKKELTQIKQKVDSLLENLEKIEKE 0000000000000000000000013456 >Chimera of Neuropeptide Y; SWP:P01298; PDB:1TZ4A YPSKPDNPGEDAPAEDLAQYAADLRHYINLITRQRY 999999998753211000000000000000000112 >Chimera of Pancreatic hor; SWP:P01298; PDB:1TZ5A APLEPVYPGDNATPEQMARYYSALRRYINMLTRPRY 999999987531000000000000000000001234 >amyloid beta A4 precursor; SWP:Q02410; PDB:1U39A PPVTTVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHR 210000000000000000000000000000000000000000000 IIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPA 00000000000000000000000000000000000 >prion-like protein; SWP:P27177; PDB:1U3MA GSVVGGLGGYAMGRVMSGMNYHFDRPDEYRWWSENSARYPNRVYY 654443321000000001111111110000000000000100000 RDYSSPVPQDVFVADCFNITVTEYSIGPAAKKNTSEAVAAANQTE 000111000000000000000000000111245445422110000 VEMENKVVTKVIREMCVQQYREYRLAS 000000000000000000000000112 >Huntingtin-associated pro; SWP:P97924; PDB:1U3OA GPLGSPGIPGSTLSGGCELTVVLQDFSAAHSSELSIQVGQTVELL -------------52000000000000000000000000000000 ERPSERPGWCLVRTTERSPPQEGLVPSSTLCISHSRS 00000000000000010000000000000001235-- >Gag polyprotein; SWP:Q70622; PDB:1U57A LEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQR 976545534444343233222221111211211122222344667 KIV 899 >prion protein; SWP:Q9I9C0; PDB:1U5LA GSVVGGLGGYALGSAMSGMRMNFDRPEERQWWNENSNRYPNQVYY 654321111000110011100100000000000012110000000 KEYNDRSVPEGRFVRDCVNITVTEYKIDPNENQNVTQVEVRVMKQ 001111111100000000000000000011111100000000000 VIQEMCMQQYQQYQLASG 00000000000000011- >alpha 1 type II collagen; SWP:P02458; PDB:1U5MA YVEFQEAGSCVQDGQRYNDKDVWKPEPCRICVCDTGTVLCDDIIC 765432210000000000000000000000000000000000011 EDVKDCLSPEIPFGECCPICPADLAAAA 2245678876557531244434568999 >RNA-binding protein UBP1; SWP:Q967R0; PDB:1U6FA MSQIPLVSQYDPYGQTAQLQQLQQQQQQHIPPTQMNPEPDVLRNL 999999999999999999999999999999999764321100000 MVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVK 000000000000000000000000000000001110000000000 FQSGSSAQQAIAGLNGFNILNKRLKVALAASGHQRPGIAGAVGDG 000000000000000000011000000001357999999999999 NGYL 9999 >Talin 1; SWP:P26039; PDB:1U89A GSHMQAATEDGQLLRGVGAAATAVTQALNELLQHVKAHATGAGPA 999999986421000000000000000000000000011234442 GRYDQATDTILTVTENIFSSMGDAGEMVRQARILAQATSDLVNAI 210000000000000000000000000000000000000000000 KADAEGESDLENSRKLLSAAKILADATAKMVEAAKGAAAHPDSEE 000001111100000000000000000000000000001358999 QQQR 9999 >Cytochrome c oxidase copp; SWP:Q12287; PDB:1U96A MTETDKKQEQENHAECEDKPKPCCVCKPEKEERDTCILFNGQDSE 999999999999976533222222110000000000000011111 KCKEFIEKYKECMKGYGFEVPSAN 200000000000001121112346 >Procollagen C-proteinase; SWP:Q15113; PDB:1UAPA MGSSHHHHHHSSGLVPRGSHMLESPDAPTCPKQCRRTGTLQSNFC -----------------------4443332111000000000000 ASSLVVTATVKSMVREPGEGLAVTVSLIGAYKTGGLDLPSPPTGA 000000000000000000000000000000000000000000000 SLKFYVPCKQCPPMKKGVSYLLMGQVEENRGPVLPPESFVVLHRP 000000000000000000000000000000000000000000000 NQDQILTNLSKRKCPSQPV 0000000000000011224 >mouse-musashi-1; SWP:Q61474; PDB:1UAWA CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFG 100000000100000000000000100000000123444321000 FVTFMDQAGVDKVLAQSRHELDSKTIDPKVAF 00001110000000000000000000000012 >attachment region binding; SWP:O42403; PDB:1UB1A MGHHHHHHAPAVPEASASPKQRRSIIRDRGPMYDDPTLPEGWTRK --------9999999999999999999997643566544210000 LKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEKVGDTSLDP 000124333110000000000000000000000000112221111 NDFDFTVTGRGSPSRREQRPPKKAKSPKSPGSGRGRGRPKGSG 1100000001234688999999999999999999999999999 >Ciliary Neurotrophic Fact; SWP:P26992; PDB:1UC6A GPLGSVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLK 655421000000000000000000000000000000111111100 FFLRYRPLILDQWQHVELSNGTAHTITDAYAGKEYIIQVAAKDNE 000000000110000000000000000000000000000000011 IGTWSDWSVAAHATPWTEE 1100000000000000012 >Apoptosis-associated spec; SWP:Q9ULZ3; PDB:1UCPA MGRARDAILDALENLTAEELKKFKLKLLSVPLREGYGRIPRGALL 200000000000000000000000000000000000000000000 SMDALDLTDKLVSFYLETYGAELTANVLRDMGLQEMAGQLQAATH 000000000000000000000000000000000000000000000 Q 2 >EPHRIN TYPE-A RECEPTOR 8; SWP:P29322; PDB:1UCVA GSSGSSGLTVGDWLDSIRMGRYRDHFAAGGYSSLGMVLRMNAQDV 999752000000000000000000000000000000000000000 RALGITLMGHQKKILGSIQTMRAQLTSTQGSGPSSG 000000000000000000000000012468999999 >PROTEIN (UBIQUITIN CORE M; SWP:Q6VZQ1; PDB:1UD7A MQVFLKTLTGKTVTIEVEPSDTVENFKAKIQDKEGIPPDQQRLIF 000000000000000000000000000000000000000000000 AGKQLEDGRTLSDYNIQKESTIHLVLRLRGG 0000000000000000010000000012457 >Nawaprin; SWP:P60589; PDB:1UDKA NEKSGSCPDMSMPIPPLGICKTLCNSDSGCPNVQKCCKNGCGFMT 100000001234555554211000000000000000001221000 CTTPVP 000000 >intersectin 2; SWP:Q9NZM3; PDB:1UDLA GSSGSSGQKGWFPASHVKLLGPSSERATPAFHPVCQVIAMYDYAA 999999986422478999999999865321000000000000000 NNEDELSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYVKMTT 000000000000000000000000000000000000000000000 DSSGPSSG 12346899 >Coactosin-like protein; SWP:NA; PDB:1UDMA GSEGAATMATKIDKEACRAAYNLVRDDGSAVIWVTFRYDGATIVP 998654320000000000000000001111000000000000000 GDQGADYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIG 000000000000000000000000000123332210100000000 EDVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIRSE 000000000000000000000000000000000000000000000 LKKAGGANYDAQSE 00002468999999 >Intersectin 2; SWP:Q9NZM3; PDB:1UE9A GSSGSSGEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQG 986421000000000000111000000000000000000000000 ELQARGKKRQKGWFPASHVKLLGPSSERASGPSSG 00001111000000000000001345789999999 >KIAA1568 Protein; SWP:Q9HCK4; PDB:1UEMA GSSGSSGKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLP 999999998643110000000000000000000000000000000 ASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVR 000000000000000000000000000000000000000000000 AINPQGLSDPSPMSDPVRTQDSGPSSG 000000000000000000000112357 >KIAA0343 protein; SWP:Q92823; PDB:1UENA GSSGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRG 999998654311000000000000000000000000000000000 HLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPF 000000000000124444432100000000000000000000000 SHYTLNVRVVNGKGEGPASPDRVFNTPEGSGPSSG 00000000000000000000000000000135679 >Penaeidin-3a; SWP:P81058; PDB:1UEOA QVYKGGYARPIPRPPPFVRPLPGGPIGPYNGCPVSCRGISFSQAR 999999999999999999999997653111100000000000000 SCCSRLGRCCHVGKGYSG 000000000000113458 >Membrane Associated Guany; SWP:Q86UL8; PDB:1UEPA GSSGSSGYKELDVHLRRMESGFGFRILGGDEPGQPILIGAVIAMG 765431000000000000111000000000000000000000010 SADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNL 000000000000000000000000000000000000000000000 TVRRKVLSGPSSG 0000001346789 >MEMBRANE ASSOCIATED GUANY; SWP:Q86UL8; PDB:1UEQA GSSGSSGLFTRDASQLKGTFLSTTLKKSNMGFGFTIIGGDEPDEF 997654210000000010000000000011000000000000000 LQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQ 000000000000000000000000000000000000000000000 SVPIGQSVNLVLCRGYPLPFDPEDPANSGPSSG 000000000000000000011343445689999 >MEMBRANE ASSOCIATED GUANY; SWP:Q86UL8; PDB:1UEWA GSSGSSGSLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPH 999976432000000000001000000001234577764321000 KIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKD 000000000000001000000000000000000000000000000 AGLSVTLRIIPQEELNSPSGPSSG 010000000012354567899999 >KIAA0343 protein; SWP:Q92823; PDB:1UEYA GSSGSSGPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNS 655444332100000000000000000111100000000000000 PITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFR 000000000000000000000000000000000000000000000 VMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGPSSG 0000000000000000000000122222134678899 >KIAA1526 Protein; SWP:Q9P202; PDB:1UEZA GSSGSSGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPG 986432100000000124432100000000000000000000000 SLAEKEGLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVY 000000000000000000000010000000000012110000000 SAGRISGPSSG 01123445567 >KIAA1526 protein; SWP:Q9P202; PDB:1UF1A GSSGSSGDRRSTLHLLQGGDEKKVNLVLGDGRSLGLTIRGGAEYG 999999999999999864210000000001100000000000000 LGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLL 000000000000000000000000000000000000000000000 KSSRHLILTVKDVGRLPHARTTVDETKWIASSSGPSSG 00000000000001246899999999999999999999 >Intersectin 2; SWP:Q9NZM3; PDB:1UFFA GSSGSSGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYG 643201000000000011100000000000000000000000000 SFQGNFGWFPCNYVEKMPSSENEKAVSPKKALLPPTVSLSATSGP 000000000000000000135567999999999999999999999 SSG 999 >Lamin A; SWP:P48678; PDB:1UFGA GSSGSSGQSQGGGSVTKKRKLESSESRSSFSQHARTSGRVAVEEV 999999999999999999999876543110000000000000000 DEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLK 000000000000000000000000000000000000000000000 AGQVVTIWASGAGATHSPPTDLVWKAQNTWGCGSSLRTALINSTG 000000000000000000000000000000000000000000000 EEVAMRKLVRSGPSSG 0000000000112467 >COP9 complex subunit 4; SWP:O88544; PDB:1UFMA GSSGSSGGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAA 999999985320000000000000000000000000000000000 KAEKIASQMITEGRMNGFIDQIDGIVHFETREASGPSSG 000000000000000000000000000000124679999 >putative nuclear protein; SWP:Q8BVK9; PDB:1UFNA GSSGSSGNDAVDFSPTLPVTCGKAKGTLFQEKLKQGASKKCIQNE 999999876544300000000000000000000000000000000 AGDWLTVKEFLNEGGRATSKDWKGVIRCNGETLRHLEQKGLLFSG 000000000000000000000000000000000000000000000 PSSG 1235 >Synaptojanin 2; SWP:O15056; PDB:1UFWA GSSGSSGSSFQGPLDATVVVNLQSPTLEEKNEFPEDLRTELMQTL 866545543323222110000011111111110011000000000 GSYGTIVLVRINQGQMLVTFADSHSALSVLDVDGMKVKGRAVKIS 011111110000100000111111111111111111111111011 GPSSG 12357 >KIAA1526 protein; SWP:Q9P202; PDB:1UFXA GSSGSSGTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSA 975310000000000000000000000000000000000000000 HNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYID 001000000000000000000000000000000000000000000 FLVTEFNSGPSSG 0000001345678 >Hypothetical protein BAB2; SWP:Q69ZS7; PDB:1UFZA GSSGSSGEYGYEDLRESSNSLLNHQLSEIDQARLYSCLDHMREVL 999999999977765544455444545554443333222212322 GDAVPDDILTEAILKHKFDVQKALSVVLEQDGSGPSSG 34433222111122233322321232223345566899 >splicing factor 4; SWP:Q8CH02; PDB:1UG0A GSSGSSGEEDYEQWLEIKVSPPEGAETRRVIEKLARFVAEGGPEL 999754300000000000000000010000000000000000000 EKVAMEDYKDNPAFTFLHDKNSREFLYYRRKVAEIRKSGPSSG 0000000000000000000101000000000000000245789 >KIAA1010 protein; SWP:Q6XZF7; PDB:1UG1A GSSGSSGASLLARYPPEKLFQAERNFNAAQDLDVSLLEGDLVGVI 310000000000000000000000000000000000000000000 KKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYNPRRSHSDASSGPS 000001000000000000000000000000000135799999999 SG 99 >2610100B20Rik gene produc; SWP:Q9DB00; PDB:1UG2A GPSGSSGAGALPKASEATVCANNSKVSSTGEKVVLWTREADRVIL 999999999999999999999987655444331100000000000 TMCQEQGAQPHTFSVISQQLGNKTPVEVSHRFRELMQLFHTACES 000000000000000000000000000000000000000011224 GPSSG 45678 >2610208M17Rik protein; SWP:NA; PDB:1UG7A GSSGSSGMSEVTRSLLQRWGASLRRGADFDSWGQLVEAIDEYQIL 998754311000000000000000000000000000000000000 ARHLQKEAQAQHNNSEFTEEQKKTIGKIATCLELRSAALQSTQSQ 000000000133210000000000000000000000000001221 EEFKLEDLKKLEPILKNILTYNKEFPFDVQPISGPSSG 10000000000000000000010000000000124568 >Poly(A)-specific Ribonucl; SWP:Q8VDG3; PDB:1UG8A GSSGSSGDQKKFIDQVIEKIEDFLQSEEKRSLELDPCTGFQRKLI 531000000000000000000000000000000000000000000 YQTLSWKYPKGIHVETLETDKKERHIVISKVDEEERSGPSSG 000000000000000000001100000000000111233556 >RIKEN cDNA 2310057J16 pro; SWP:Q80VC9; PDB:1UGJA GSSGSSGPRLYKEPSAKSNKFIIHNALSHCCLAGKVNEPQKNRIL 999999999998654210000000000000000000000000000 EEIEKSKANHFLILFRDSSCQFRALYTLSGETEELSRLAGYGPRT 000000000000000001210000000000000000000000000 VTPAMVEGIYKYNSDRKRFTQIPAKTMSMSVDAFTIQGHLWQSKK 000000000000000000000000000000000000000001132 SGPSSG 334445 >Synaptotagmin IV; SWP:Q9H2B2; PDB:1UGKA GSSGSSGLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSD 655421000000000000000000000000000000001110000 PYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQEL 000000000000000000000000000000000000000000000 ALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISGP 000000000122210000000000000000000000000000000 SSG 135 >S-locus pollen protein; SWP:Q9SE17; PDB:1UGLA NLMKRCTRGFRKLGKCTTLEEEKCKTLYPRGQCTCSDSKMNTHSC 531100000000000000000000000000100000000000000 DCKSC 00001 >Bcl2-associated athanogen; SWP:NA; PDB:1UGOA GSSGSSGMDMGNQHPSISRLQEIQREVKAIEPQVVGFSGLSDDKN 999997654321100000000000000000000000000001110 YKRLERILTKQLFEIDSVDTEGKGDIQQARKRAAQETERLLKELE 000000000000000000000010000000000000000000000 QNASGPSSG 000012568 >Olygophrenin-1 like prote; SWP:Q9UNA1; PDB:1UGVA GSSGSSGTPFRKAKALYACKAEHDSELSFTAGTVFDNVHPSQEPG 999976421000000000000111000000000000000000000 WLEGTLNGKTGLIPENYVEFLSGPSSG 000000000000000000000124689 >KIAA1010 protein; SWP:Q6XZF7; PDB:1UHCA GSSGSSGSEAEGNQVYFAVYTFKARNPNELSVSANQKLKILEFKD 999998876543100000000000000000000000000000000 VTGNTEWWLAEVNGKKGYVPSNYIRKTESGPSSG 0100000000000000000000000002357899 >INTERSECTIN 2; SWP:Q9NZM3; PDB:1UHFA GSSGSSGGEEYIALYPYSSVEPGDLTFTEGEEILVTQKDGEWWTG 998643100000000000000100000000000000000000000 SIGDRSGIFPSNYVKPKDSGPSSG 000000000000000000246799 >hypothetical protein KIAA; SWP:Q9UPQ7; PDB:1UHPA GSSGSSGKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFV 997531000000000000000000000112456666543100000 SKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKTAK 000000000000000000000000000000000000000000000 EPIVVQVLRRTSGPSSG 00000000002346689 >SWI/SNF related, matrix a; SWP:Q61466; PDB:1UHRA GSSGSSGQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKL 765432100000000000000000000000000000000000000 QDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLHALLMPPEPSGP 000000000000000000000000000000000000000013579 SSG 999 >expressed protein; SWP:NA; PDB:1UHTA GSSGSSGMVTPSLRLVFVKGPREGDALDYKPGSTIRVGRIVRGNE 997543211000000000000000000000000000000000000 IAIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLNSNALDPETS 000000000000000000100000000001000000000000000 VNLGDGDVIKLGEYTSILVNFVSGPSSG 0000000000000000000000023568 >product of RIKEN cDNA 311; SWP:NA; PDB:1UHUA GSSGSSGTPLSLTLDHWSEIRSRAHNLSVEIKKGPWRTFCASEWP 986432000000000000000000000000000000000000000 TFDVGWPPEGTFDLTVIFEVKAIVFQDGPGSHPDQQPYITVWQDL 000000000000000000000000000010000000000000000 VQNSPPWIKSGPSSG 000000001235789 >Pleckstrin; SWP:Q9JHK5; PDB:1UHWA GSSGSSGLGALYLSMKDPEKGIKELNLEKDKKVFNHCLTGSGVID 311111000000000000000000000011100000000000000 WLVSNKLVRNRQEGLMISASLLSEGYLQPAGDLSKNAADGIAENP 000000000000000000000000000000000000000000000 FLDSPDAFYYFPDSGPSSG 0000000000000001235 >staufen (RNA binding prot; SWP:Q8CJ67; PDB:1UHZA GSSGSSGPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVK 433211000000000000000000000000001011100000000 VGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDSGPSSG 00000000000000000000000000000000000000012245 >Double-stranded RNA-bindi; SWP:O70133; PDB:1UILA GSSGSSGLESEEVDLNAGLHGNWTLENAKARLNQYFQKEKIQGEY 999999998755322111100000000000000000000000000 KYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCA 000000000000000000000000000000000000000000000 LSLVRQLYHLGVIEAYSSGPSSG 00000000000000001123457 >HUMAN DISCS LARGE 5 PROTE; SWP:Q8TDM6; PDB:1UITA GSSGSSGGERRKDRPYVEEPRHVKVQKGSEPLGISIVSGEKGGIY 999999998766432100000000000000000000000111000 VSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQC 000000000000000000000000000000000000000000000 DTITILAQYNPHVHQLSSHSRSGPSSG 000000000000012345678999999 >KIAA0559 protein; SWP:Q9Y6V0; PDB:1UJDA GSSGSSGHYIFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGH 986543210000000000012345666543210000000000011 SGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEV 100000000000110000000000000000000000000000000 QSIISQQSGEAEICVRLDLNMSGPSSG 000001111000000000101134567 >Potassium voltage-gated c; SWP:Q12809; PDB:1UJLA AIGNMEQPHMDSRIGWLHNLGDQIGKPYNSSGLGGPSIKDKY 999999999999986544222344457878887754323345 >Transgelin; SWP:P37804; PDB:1UJOA GSSGSSGEELEERLVEWIVVQCGPDVGRPDRGRLGFQVWLKNGVI 999753100000000000000000000001122100000000000 LSKLVNSLYPEGSKPVKVPENPPSMVFKQMEQVAQFLKAAEDYGV 000000000011100000010000000000000000000000000 IKTDMFQTVDLYEGKDMAAVQRTLMALGSLAVTKNDGNYRGDPNW 000000000000000000000000000000000011100000000 FMKSGPSSG 113457778 >hypothetical protein AK01; SWP:Q9CZW6; PDB:1UJRA PSSGSSGFLDKPTLLSPEELKAASRGNGEYAWYYEGRNGWWQYDE 999999999999999987654432233332211122333222222 RTSRELEDAFSKGKKNTEMLIAGFLYVADLENMVQYRRNEHGRRR 211211111112111112223332221111111111223222211 KIKRDIIDIPKKGVSGPSSG 11122335899999999999 >actin-binding LIM protein; SWP:O94929; PDB:1UJSA GSSGSSGNAVNWGMREYKIYPYELLLVTTRGRNRLPKDVDRTRLE 887654210000000000000000000001010000000000000 RHLSQEEFYQVFGMTISEFDRLALWKRNELKKQARLFSGPSSG 0000000000000000000000000000000000000001235 >KIAA1568 protein; SWP:Q9HCK4; PDB:1UJTA GSSGSSGRQVQKELGDVLVRLHNPVVLTPTTVQVTWTVDRQPQFI 976532100000000000000100000000000000000000000 QGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEI 000000000000000000000000000000000000000000000 KVRPYFNEFQGMDSESKTVRTTEESGPSSG 000000000000000000000001245679 >scribble; SWP:Q14160; PDB:1UJUA GSSGSSGPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEG 987643100000000000000000000000011111122111000 IFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLR 000000000000000000000000000000000000000000000 SVGDTLTVLVCDGFESGPSSG 000000000000001123579 >MEMBRANE ASSOCIATED GUANY; SWP:Q86UL8; PDB:1UJVA GSSGSSGQAELMTLTIVKGAQGFGFTIADSPTGQRVKQILDIQGC 999986532100000000101100000000000000000000000 PGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRG 000000000000000000000000000000000000000000001 SGPSSG 235689 >Rho guanine nucleotide ex; SWP:Q15052; PDB:1UJYA GSSGSSGSHQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGW 988765321000000000000000000000000000000000000 WEGTLNGRTGWFPSNYVREIKSSERSGPSSG 0000000000000000000000000011368 >BAG-family molecular chap; SWP:Q9JLV1; PDB:1UK5A GSSGSSGAPAEPAAPKSGEAETPPKHPGVLKVEAILEKVQGLEQA 999999999999876665544321000000000000000000000 VDSFEGKKTDKKYLMIEEYLTKELLALDSVDPEGRADVRQARRDG 000000000000000000000000000000000000000000000 VRKVQTILEKLEQKASGPSSG 000000000000000012457 >GCN2 eIF2alpha kinase; SWP:Q9QZ05; PDB:1UKXA GSSGSSGMESYSQRQDHELQALEAIYGSDFQDLRPDARGRVREPP 999999643100000000000000000000000122333221000 EINLVLYPQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKNAKGL 000000000111110000000000000000000000000000000 SNESVNLLKSHLEELAKKQCGEVMIFELAHHVQSFLSEHNKSGPS 100000000000000000000000000000000000000012456 SG 79 >squamosa promoter binding; SWP:Q9S7A9; PDB:1UL4A GSSGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLS -------11000000011111100000000000000000100000 GLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESG 0000000000000000011222111011111346899999999-- PSSG ---- >squamosa promoter binding; SWP:Q8S9G8; PDB:1UL5A GSVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKR --0000000000000000000000000000000000000000000 YCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKPVDKGGVA 0000000000000011211001223468999999999999999 >MAP/microtubule affinity-; SWP:Q03141; PDB:1UL7A GSSGSSGRFTWSMKTTSSMDPSDMMREIRKVLGANNCDYEQRERF 999987643221110000000000000000000000000000000 LLFCVHGDGHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFK 000000000000000000000000111100000000000000000 NIASKIANELKL 000000000000 >KIAA1849 protein; SWP:Q96JH8; PDB:1UM1A GSSGSSGYVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLP 976431000000000000000000000000000000000000000 GSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGKKMRF 000000000000000000000000110000000000000100000 LVAKSDVETAKKIHSGPSSG 00000000000000124679 >synapse-associated protei; SWP:Q92796; PDB:1UM7A GSSGSSGRPGGDAREPRKIILHKGSTGLGFNIVGGEDGEGIFVSF 999987655321000000000000110000000000000000000 ILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQS 000000000000000000000000000000000000000000000 VTIVAQYRPEEYSRFESSGPSSG 00000000000000000135568 >PHOTOSYNTHETIC APPARATUS; SWP:Q53228; PDB:1UMQA MGSSHHHHHHSSGLVPRGSHMLAKGESLPPPPENPMSADRVRWEH ---------------------999999999976431100000000 IQRIYEMCDRNVSETARRLNMHRRTLQRILAKRSPR 000000000000000000000000000000000245 >VILLIN 1; SWP:P09327; PDB:1UNCA LSIEDFTQAFGMTPAAFSALPRWKQQNLKKEKGLF 10000000000000000000000000000000001 >ADVILLIN; SWP:O75366; PDB:1UNDA YLSEQDFVSVFGITRGQFAALPGWKQLQMKKEKGLF 100000000000000000000000000000000001 >STE50 PROTEIN; SWP:P25344; PDB:1UQVA GSHMNNEDFSQWSVDDVITWCISTLEVEETDPLCQRLRENDIVGD 986532111100000000000000000000000000000000000 LLPELCLQDCQDLCDGDLNKAIKFKILINKMRDSKLEWKD 0000000000000000000000000000000001346799 >PROTEIN KINASE C-LIKE 1; SWP:Q16512; PDB:1URFA GIPATNLSRVAGLEKQLAIELKVKQGAENMIQTYSNGSTKDRKLL 854321110000000000000000000000000011221110000 LTAQQMLQDSKTKIDIIRMQLRRALQADQLENQAAP 000000000000000000000000001113468999 >HISTONE H1; SWP:P53551; PDB:1USSA KASSPSSLTYKEMILKSMPQLNDGKGSSRIVLKKYVKDTFSSKLK 999643110000000000001122110000000000000000101 TSSNFDYLFNSAIKKCVENGELVQPKGPSGIIKLNKKKVKLST 1210000000000000000000001122110000012468999 >HISTONE H1; SWP:P53551; PDB:1USTA KKEEASSKSYRELIIEGLTALKERKGSSRPALKKFIKENYPIVGS -53211000000000000000000100000000000000000000 ASNFDLYFNNAIKKGVEAGDFEQPKGPAGAVKLAKKKSPEVKKEK 010000000000000000000000101000000012334446777 EVS 768 >SPHENISCIN-2; SWP:P83430; PDB:1UT3A SFGLCRLRRGFCARGRCRFPSIPIGRCSRFVQCCRRVW 32332222110000111210000000010000000001 >CELL DIVISION PROTEIN FTS; SWP:P29131; PDB:1UTAA FTSNKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSKITTNNGW ----65310000011000000000000000000000000001000 NRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG 000000001110000000000000000100000124 >BOVINE PANCREATIC TRYPSIN; SWP:P00974; PDB:1UUBA DFCLEPPYTGPCRAAIIRYFYNAKAGLCQTFVYGGCRAKSNNFKS 100001001211111000000000110000000111000000000 AEDCMRTCGGA 00000000023 >SERINE PROTEINASE INHIBIT; SWP:Q9NQ38; PDB:1UVGA GPDSEMCKDYRVLPRIGYLCPKDLKPVCGDDGQTYNNPCMLCHEN --3343344444556544444554332223333223222211111 LIRQTNTHIRSTGKCEESSTPGTTAASMPPSDE 233332222333334445445444556689999 >DNA LIGASE III; SWP:P49916; PDB:1UW0A MAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIGKVVPNPFSESGG 531000000001110000111100000000000000012223321 DMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQI 000000000000000001122110000010110001100000000 TQHIADLSSKAAGTPKKKAVVQAKLTT 000000011246899999999999999 >U1 SMALL NUCLEAR RIBONUCL; SWP:P09234; PDB:1UW2A MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQ 421000000000011101000000000000000000000011111 AQSLIDKTTAAFQQGK 1110000011123346 >HYPOTHETICAL PROTEIN TM04; SWP:Q9WYV7; PDB:1UWDA PMSKKVTKEDVLNALKNVIDFELGLDVVSLGLVYDIQIDDQNNVK -42100000000000000001110000000010000000000000 VLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTFDPPWTP 000000001000000000000000000000000000000000000 ERMSPELREKFGV 0000000000111 >FRUCTOSE REPRESSOR; SWP:P0ACP1; PDB:1UXC_ MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREH 000000000000000000000000000000000000000000000 NYHPN 00000 >HYPOTHETICAL PROTEIN FLJ2; SWP:O75400; PDB:1UZCA GSQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIIN --7642100000000000000000000000000000000000000 DPRYSALAKLSEKKQAFNAYKVQTEK 00000000000000000000000013 >HBP1; SWP:Q8R316; PDB:1V06A GAMAPSTIWHCFLKGTRLCFHKESNKEWQDVEDFARAASCDNEEE ----00000000000000000001110000000000001223456 IQMGTHKGYGSDGLKLLSHEESVSFGESVLKLTFDPGTVEDGLLT 554321100000000000000000000000000000000000000 VECKLDHPFYVKNKGWSSFYPSLTVVQHGIPCCEIHIGDVCLPPG 000000000000000000000000000000000000000000000 HPDAINF 0000000 >OBSCURIN; SWP:Q5VST9; PDB:1V1CA GSSIFDIYVVTADYLPLGAEQDAITLREGQYVEVLDAAHPLRWLV ---100000000100011111000000000000000110000000 RTKPTKSSPSRQGWVSPAYLDRRLKL 00001111000000000000000013 >Regulating synaptic membr; SWP:Q9UQ26; PDB:1V27A GSSGSSGGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPY 543221000000000000000000000000000011222100000 VKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRER 000000000110000000000000000000000000000000000 MLEITLWDQARVREEESEFLGEILIELETALLDDEPHWYKLQTHD 000000000012332111000000000000000000000000022 SGPSSG 445568 >3300001G02Rik protein; SWP:Q8VIK1; PDB:1V2YA GSSGSSGMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQ 654210000000001110000000000000000000000000000 EREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRDYGIRNRDEV 001111221000000000000110000000000000000000000 SFIKKLGQKSGPSSG 000001234567899 >hypothetical protein RAFL; SWP:Q9FMT4; PDB:1V31A GSSGSSGVPEKFKLSTALMDVLGIEVETRPRIIAAIWHYVKARKL 998754321000000000000000000000000000000000000 QNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLSPPPPSGP 000000000001000000000000000000000000000001246 SSG 899 >hypothetical protein RAFL; SWP:Q9FT92; PDB:1V32A GSSGSSGKRFEFVGWGSRQLIEFLHSLGKDTSEMISRYDVSDTIA 999999864210000000000000000000000000000000000 KYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEKHY 000000000000000000000000000000000000000000000 KENQDSGPSSG 11356789999 >SAM-domain protein SAMSN-; SWP:P57725; PDB:1V38A GSSGSSGRRENHQTIQEFLERIHLQEYTSTLLLNGYETLDDLKDI 999999853200000000000000000000000000000000000 KESHLIELNIADPEDRARLLSAAESLLSGPSSG 000000000000000000000000000136899 >Pleckstrin 2; SWP:Q9WV52; PDB:1V3FA GSSGSSGLHRIVDKMHDTSTGIRPSPNMEQGSTYKKTFLGSSLVD 532211000000000000000000111222211110000000000 WLISSNFAASRLEAVTLASMLMEENFLRPVGVRSMGAIRSGDLAE 000000000000000000000000000000111112111221111 QFLDDSTALYTFAESYKKKVSSKESGPSSG 000000000000011234679999999999 >Transcriptional Repressor; SWP:NA; PDB:1V4RA GPMPYKAPEGKGYADVATHFRTLIKSGELAPGDTLPSVADIRAQF --5543334433232122213323443223332111222212221 GVAAKTVSRALAVLKSEGLVSSRGALGTVVEKNPIVITGADRLKR 222222122223333433333334432222454445443456799 MEKNGMRYAPGE 999999999999 >Spinoxin; SWP:P84094; PDB:1V56A IRCSGSRDCYSPCMKQTGCPNAKCINKSCKCYGC 0000000000000000000000000000000000 >Covalitoxin-I; SWP:NA; PDB:1V5AA RCLPSGKACAGVTQKIPCCGSCVRGKCS 1101000001222221100000000001 >KIAA1355 protein; SWP:Q9P2J2; PDB:1V5JA GSSGSSGLSPPRGLVAVRTPRGVLLHWDPPELVPKRLDGYVLEGR 545421000000000000000000000000000000000000000 QGSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFAGSFVSD 000000000000000000000000000000000000000000000 PSNTANVSTSGLSGPSSG 000000000012345679 >microtubule-associated pr; SWP:Q61166; PDB:1V5KA GSSGSSGQRRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLF 987655321000000000000000000000000000000000000 PGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLV 000000000000000000000000000000000000000000000 KGKFQDNFEFVQWFKKFFDSGPSSG 0010000000000000000135689 >PDZ and LIM domain 3; act; SWP:NA; PDB:1V5LA GSSGSSGNVVLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAA 754210000000000000000000000000000000000000000 NLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETR 000000000000000000000000000000000000000001112 LWSPQVSSGPSSG 3444432357899 >SH2 and PH domain-contain; SWP:Q9JID9; PDB:1V5MA GSSGSSGNLAAKVELVDIQREGALRFMVADDAASGPGGTAQWQKC 999999999764321000000000000000123334333200000 RLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAIIEVRTTMPLE 000000011100000000000000000000000000000001121 MPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDSGPSS 111100000000000000000000000000000000000113557 G 8 >PDI-like Hypothetical Pro; SWP:O80763; PDB:1V5NA GSSGSSGTEERLKEIEAKYDEIAKDWPKKVKHVLHEEHELELTRV 999865432210000000000000000000000000000000000 QVYTCDKCEEEGTIWSYHCDECDFDLHAKCALNEDTKESGPSSG 00000000000000000000000000000000012345679999 >1700011N24Rik protein; SWP:NA; PDB:1V5OA GSSGSSGMLITVYCVRRDLTEVTFSLQVNPDFELSNFRVLCELES 765421000000000000000000000000000000000000000 GVPAEEAQIVYMEQLLTDDHCSLGSYGLKDGDMVVLLQKDNVGLR 000000000000000000000000000000000000000122344 TPGRTPSGPSSG 567899999999 >pleckstrin homology domai; SWP:NA; PDB:1V5PA GSSGSSGMPYVDRQNRICGFLDIEDNENSGKFLRRYFILDTQANC 999999999985431000000000011110000000000000000 LLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFV 000000000000110000000000000000000100001000000 INALSQRYFLQANDQKDLKDWVEALNQASKSGPSSG 000000000000000000000000000001346789 >Growth-arrest-specific pr; SWP:P11862; PDB:1V5RA GSSGSSGNLLDDAVKRISEDPPCKCPTKFCVERLSQGRYRVGEKI 876543100000000000000000000000000001000000000 LFIRMLHNKHVMVRVGGGWETFAGYLLKHDPCRMLQISRVDGKTS 000000000000000110000000000000000001234455678 PSGPSSG 9999999 >MAP/microtubule affinity-; SWP:Q03141; PDB:1V5SA MKDHLIHNVHKEEHAHAHNKDYDIPTTENLYFQGSSGSSGDMMRE 999999999999999999876543221000000000000000000 IRKVLGANNCDYEQRERFLLFCVHGDGHAENLVQWEMEVCKLPRL 000000000000000000000000011011000000000011233 SLNGVRFKRISGTSIAFKNIASKIANELKLSGPSSG 211000000000000000000000000000001124 >8430435I17Rik Protein; SWP:NA; PDB:1V5TA GSSGSSGLPIIVKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLP 865321000000000000000000000000000000000000000 ERQKLLGLKVKGKPAENDVKLGALKLKPNTKIMMMGTRESGPSSG 000000000000000000000000000000000000000123457 >SET binding factor 1; SWP:Q8BK68; PDB:1V5UA GSSGSSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRM 766665310000000001232100000000000000000000011 DTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTRRVYN 110000000000000000000000001000000000000000000 FCAQDVPSAQQWVDRIQSCLSSGPSSG 000000000000000000001247899 >RIKEN cDNA 1810037G04; SWP:Q9D8S9; PDB:1V60A GSSGSSGMATRSCVSRGSAGSAAAGPVEAAIRAKLEQALSPEVLE 999999999999999999865310000000000000000000000 LRNESGGHAVPAGSETHFRVAVVSSRFEGMSPLQRHRLVHEALSE 000011211111100000000000000000000000000000000 ELAGPVHALAIQAKTPAQWRENPQLDISPPCLG 000000000000000000000000000123468 >Rac/Cdc42 guanine nucleot; SWP:Q8K4I3; PDB:1V61A GSSGSSGQILSEPIQAWEGDDIKTLGNVIFMSQVVMQHGACEEKE 987765531211000001110000000000000000012221100 ERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGMVVNRLDEIEGS 000000000000000012221000000000000000001133443 DCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLTKSGPSSG 210000011111000000210000000000000001355689 >KIAA1719 protein; SWP:Q9C0E4; PDB:1V62A GSSGSSGDTVANASGPLMVEIVKTPGSALGISLTTTSLRNKSVIT 999999998754210000000000000000000000001000000 IDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASI 000000000000000000000000000000000000000000000 SEKVRLEILPVPQSQRPLRPSSGPSSG 000000000000010111346899999 >Nucleolar transcription f; SWP:P25976; PDB:1V63A GSSGSSGPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRW 865432100000110000000000000000000000000000000 QRISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYI 000000000000000000000000000000000000000000000 SNKRKSGPSSG 11113457899 >Nucleolar transcription f; SWP:P25976; PDB:1V64A GSSGSSGQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERM 999987655432210000000000000000000000000000000 VLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQ 000000000000000000000000000000000000000000000 QRVLGEEKMLNISGPSSG 000000001112457899 >RIKEN cDNA 2610044O15; SWP:NA; PDB:1V65A GSSGSSGVTYDDVHMNFTEEEWDLLDSSQKRLYEEVMLETYQNLT 999999987643210000000000000000000000000001113 DIGYNWQDHHIEESGPSSG 4578999999999999999 >Protein inhibitor of acti; SWP:O75925; PDB:1V66A MADSAELKQMVMSLRVSELQVLLGYAGRNKHGRKHELLTKALHLL 211000000000000000000000000000000000000000000 KAGCSPAVQMKIKELYRRRF 00000000000000000001 >harmonin isoform a1; SWP:Q9ES64; PDB:1V6BA GSEGAATMFSPEQIAGKDVRLLRIKKEGSLDLALEGGVDSPVGKV 864211000011001100000000000100000000000000000 VVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQK 000000010000000010000000000000000000000000000 AWNQGGDWIDLVVAVCPPKEYDDELTFF 0000000000000001123346899999 >cytoskeleton-associated p; SWP:Q9D1E6; PDB:1V6EA GSSGSSGVMVFISSSLNSFRSEKRYSRSLTIAEFKCKLELVVGSP 986431000000000001000000000000000000000000000 ASCMELELYGADDKFYSKLDQEDALLGSYPVDDGCRIHVIDHSGS 000000000001000000000000000000000000000000013 GPSSG 56678 >glia maturation factor, b; SWP:NA; PDB:1V6FA GSSGSSGSESLVVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKD 999987532100000000000000000000000000000000000 ERLVVLDEELEGVSPDELKDELPERQPRFIVYSYKYQHDDGRVSY 000000000000000000000000000000000000000000000 PLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTEDL 000000000000000000000000000000000000000000000 TEEWLREKLGSGPSSG 0000000000124458 >Actin Binding LIM Protein; SWP:Q6H8Q1; PDB:1V6GA GSSGSSGLDYQRLYGTRCFSCDQFIEGEVVSALGKTYHPDCFVCA 999864221111110000000000001000000000000000000 VCRLPFPPGDRVTFNGKECMCQKCSLPVSVSGPSSG 000000111000000000000000000122346788 >Phrixotoxin 1; SWP:P61230; PDB:1V7FA YCQKWMWTCDSARKCCEGLVCRLWCKKII 21000000011110001000000000013 >similar to ring finger pr; SWP:Q8R079; PDB:1V85A GSSGSSGEHGLLVHKAVDKWTTEEVVLWLEQLGPWASLYRDRFLS 987532110000000000000000000000000000000000000 ERVNGRLLLTLTEEEFSRAPYTIENSSHRRVILTELERVRSGPSS 000000000000000000000000000000000000000012246 G 8 >DNA segment, Chr 7, Wayne; SWP:Q9CYA9; PDB:1V86A GSSGSSGDAGGGVGKELVDLKIIWNKTKHDVKVPLDSTGSELKQK 999999887665421000000000000000000000000000000 IHSITGLPPAMQKVMYKGLVPEDKTLREIKVTSGAKIMVVGSTIS 000000000000000000000000000000000000000001234 GPSSG 55566 >Deltex protein 2; SWP:Q8R3P2; PDB:1V87A GSSGSSGEPEQVIRKYTEELKVAPEEDCIICMEKLAVASGYSDMT 998642100000000000000000000000000000000000000 DSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKT 000000000000000000000000000000001010000000000 IYGEKTGTQPWGKMEVFRSGPSSG 001124555579999999999999 >Oxysterol binding protein; SWP:Q9BZF1; PDB:1V88A GSSGSSGIVMADWLKIRGTLKSWTKLWCVLKPGVLLIYKTQKNGQ 975321000000000001111000000000000000000000000 WVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGPKGEAV 000000000000000001100000000000000000000000000 GSITQPLPSSYLIIRATSESDGRCWMDALELALKSGPSSG 0000000000000000000000000000000000136567 >Hypothetical protein KIAA; SWP:P42331; PDB:1V89A GSSGSSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDT 764321000000000000111000000000000000000000000 KPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSY 000000000000000001222221000000000113456542100 VLMASSQAEMEEWVKFLRRVAGSGPSSG 0000000000000000000001357899 >Delta-palutoxin IT2; SWP:P83257; PDB:1V91A ACVGDGQRCASWSGPYCCDGYYCSCRSMPYCRCRNNS 1000000000000000000000000000000000000 >NSFL1 cofactor p47; SWP:O35987; PDB:1V92A MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDG 100000000000000000000000000000000000000000124 G 5 >Nuclear receptor coactiva; SWP:Q9HCD5; PDB:1V95A GSSGSSGPVDCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFLNT 997543100000000000000000000000000000000000011 EVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQEHR 100000000000000000000000000000000000000000000 NMPQADAMVLVARNYERYKNECREKEREEIARQASGPSSG 0000000000000000000001113467999999999999 >BolA-like protein RIKEN c; SWP:NA; PDB:1V9JA MKGSSHHHHHHSSGASLVPRGSEGAATMELSADYLREKLRQDLEA 999999999999999999999987544310000000000000000 EHVEVEDTTLNRCATSFRVLVVSAKFEGKPLLQRHRLVNECLAEE 000000011334321000000000000000000000000000000 LPHIHAFEQKTLTPEQWTRQRRE 00000000000000000001135 >KIAA0561 protein; SWP:O60307; PDB:1V9VA GSSGSSGPKATAQMEGRLQEFLTAYAPGARLALADGVLGFIHHQI 999755422200000000000000000000000000000000000 VELARDCLAKSGENLVTSRYFLEMQEKLERLLQDAHERSDSEEVS 000000000000000000000000000000000000000000000 FIVQLVRKLLIIISRPARSGPSSG 000000000000000012457799 >putative 42-9-9 protein; SWP:NA; PDB:1V9WA GSEGAATMATFEEVSVLGFEEFDKAVKEHESKTIFAYFSGSKDTE 887643100000000000000000000000000000000000011 GKSWCPDCVEAEPVIREGLKHVTEDCVFIYCQVGDKPYWKDPNND 000000000000000000000000000000000000000000000 FRQKLKITAVPTLLKYGTPQKLVESECCQSSLVEMIFSED 0000000000000000000000000000000000000002 >poly (ADP-ribose) polymer; SWP:NA; PDB:1V9XA GSSGSSGHKPWRAEYAKSSRSSCKTCKSVINKENFRLGKLVQSTH 876432100000000000000000000000000000000000012 FDGIMPMWNHASCILKKTKQIKSVDDVEGIESLRWEDQQKIRKYV 221000000000000000000000000000000000000000000 ESGAGSNTSTSTGTSTSSSGPSSG 001247999999999999999999 >Transcription factor Sp1; SWP:P08047; PDB:1VA1A MDPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER -997431000000110000000000000000000224 >MAGUK p55 subfamily membe; SWP:Q9JLB2; PDB:1VA8A GSSGSSGPITDERVYESIGHYGGETVKIVRIEKARDIPLGATVRN 999999999865443211110100000000000000000000000 EMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVF 000000000000000000000000000000000000000000000 DLLSDMHGTLTFVLIPSSGPSSG 00000000000000000123456 >Down syndrome cell adhesi; SWP:Q8TD84; PDB:1VA9A GSSGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQN 999987653210000000000000000000000000000000000 GVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQ 000000000000001211100000000000000000000000000 YGVVVQAFNRAGTGPSSSEINATTLESGPSSG 00000000000000000000000000123345 >rhophilin, Rho GTPase bin; SWP:Q8BWR8; PDB:1VAEA GSSGSSGSASKRWSPPRGIHFTVEEGDLGFTLRGNTPVQVHFLDP 999876542100000000000000000100000000000000000 HCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEM 000000000000000000000000000000000000000000000 KVVSLLDSTSSMHNKSGPSSG 000000123355689999999 >NSFL1 cofactor p47; SWP:O35987; PDB:1VAZA MRGSHHHHHHGSERRRHSGQDVHVVLKLWKTGFSLDNGDLRSYQD ------------999985321000000000000000000000000 PSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKP 0000000000001111000000001000000000011111235 >PDZ and LIM domain 2; SWP:NA; PDB:1VB7A GSSGSSGLTVDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEA 865321000000000000000000000000000000000000000 ADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDRSSG 000000000000000000000000000000000000000000012 PSSG 3456 >Vesicle transport through; SWP:O89116; PDB:1VCSA GSSGSSGEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEK 876543210000000000000000000000000000000000000 QLEEARELLEQMDLEVREIPPQSRGMYSNRMRSYKQEMGKLETDF 000000000000000000000001100000000000000000000 KRSRIASGPSSG 000001235578 >Protein kinase C, iota ty; SWP:P41743; PDB:1VD2A GPLGSQVRVKAYYRGDIMITHFEPSISFEGLCNEVRDMCSFDNEQ 764210000000000000000000000000000000000000000 LFTMKWIDEEGDPCTVSSQLELEEAFRLYELNKDSELLIHVFPC 00000000000000000000000000000011221000000001 >Transcription initiation; SWP:P29083; PDB:1VD4A RIETDERDSTNRASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFC 999999986541000000000000000000000000000000000 HTEVEEDESAMPKKDAR 00000000113467999 >Fibroin-modulator-binding; SWP:Q5FBS0; PDB:1VD7A ETSEERAARLAKMSAYAAQRLAN 10000000000135799999999 >fibroin-modulator-binding; SWP:Q5FBS0; PDB:1VD8A ESPEQRATRLKRMSEYAAKRLSS 20000000000124689999999 >Fibroin-modulator-binding; SWP:Q5FBS0; PDB:1VD9A ETREQRAIRLARMSAYAARRLAN 10000000000013444676789 >Fibroin-modulator-binding; SWP:Q5FBS0; PDB:1VDAA ETPAQRQARLLRMSAYAAKRQAS 10000000001235789999999 >Troponin I, fast skeletal; SWP:P68246; PDB:1VDIA KVNMDLRANLKQVKKEDTEKEKDLRDVGDWRKNIEEKSGMEGRKK 322211101122122222221112221111111111111101111 MFEAGES 2234579 >Ubiquitin carboxyl-termin; SWP:P57080; PDB:1VDLA GSSGSSGMTVEQNVLQQSAAQKHQQTFLNQLREITGINDAQILQQ 999999987654343221112110000000000000000000000 ALKDSNGNLELAVAFLTAKNAKTPPQEETSGPSSG 00000000000000000111135799999999999 >hypothetical protein (RAF; SWP:Q9C5H4; PDB:1VDYA GSSGSSGESYWRSRMIDAVTSDEDKVAPVYKLEEICDLLRSSHVS 998643200000000000000000000000000000000000000 IVKEFSEFILKRLDNKSPIVKQKALRLIKYAVGKSGSEFRREMQR 000000000000000000000000000000000000000000000 NSVAVRNLFHYKGHPDPLKGDALNKAVRETAHETISAIFSEENGS 000000000000001111111000000000000000000013568 GPSSG 99999 >proline-rich protein fami; SWP:Q9M158; PDB:1VEEA GSSGSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLG 532100100000000000000000000000000000000000000 KKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYILDKFDGNSELV 000000000000000000000000000000000000000000000 AELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKKTSGPSSG 00000000000000000000000000000000000112344567 >NEDD8 ultimate buster-1; SWP:P54729; PDB:1VEGA GSSGSSGNPHMWWLQDADPENNSRQASPSQESINQLVYMGFDTVV 999999999999999999998653210000000000000000000 AEAALRVFGGNVQLAAQTLAHHGGSLPPDLQFSGPSSG 00000000000000000000001110001134689999 >NifU-like protein HIRIP5; SWP:Q9QZ23; PDB:1VEHA GSSGSSGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDG 999876432100000000000000000000001100000000000 IVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEVEGVEQVSGPS 000000012222111100000000000000000000000001246 SG 89 >RIKEN cDNA 4931431F19; SWP:Q9D4I8; PDB:1VEJA GSSGSSGARACSQSSQTALPTSLFTEGRYQQELEELKALGFANRD 999999999999999654221111000000000000000000000 ANLQALVATDGDIHAAIEMLLGASGPSSG 00000000000000000000000134679 >ubiquitin-specific protea; SWP:Q8L6Y1; PDB:1VEKA GSSGSSGGEELLPDGVPEEVMESAQPVANEEIVAQLVSMGFSQLH 999999999999999999997521000000000000000000000 CQKAAINTSNAGVEEAMNWLLSHMDDPDIDAPISGPSSG 000000000000000000000000000000000024689 >F-spondin; SWP:P35446; PDB:1VEXA GSIPCLLSPWSEWSDCSVTCGKGMRTRQRMLKSLAELGDCNEDLE 643211100000001000000000000000011122222211000 QAEKCMLPECP 00000001112 >vanadium-binding protein; SWP:Q86BW2; PDB:1VFIA ISEFAPVDCKGQCTTPCEPLTACKEKCAESCETSADKKTCRRNCK 544322111111000000000000000001111111110000000 KADCEPQDKVCDACRMKCHKACRAANCASECPKHEHKSDTCRACM 000000000000000000000000011111122322211111100 KTNCK 11112 >rhomboid family protein; SWP:Q8LB17; PDB:1VG5A GSSGSSGSRQAPIANAAVLPQSQGRVAASEEQIQKLVAMGFDRTQ 999999999999999999999764321000000000000000000 VEVALAAADDDLTVAVEILMSQSGPSSG 0000000000000000000001245679 >NEUROTOXIN B-IV; SWP:P01525; PDB:1VIB_ ASATWGAAYACENNCRKKYDLCIRCQGKWAGKRGKCAAHCIIQKN ------2--100000000000000000000000000000000000 NCKGKCKKE 000001123 >VIGILIN; SWP:Q00341; PDB:1VIG_ INRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSE 532000000001100000011111000000000000000000112 KSNLIRIEGDPQGVQQAKRELLELAS 11000000000000000000000012 >mannitol-specific PTS sys; SWP:P00550; PDB:1VKRA GSAGDVTNDLSHVRKIIVACDAGMGSSAMGAGVLRKKIQDAGLSQ ----------00000000000000000000000000000000000 ISVTNSAINNLPPDVDLVITHRDLTERAMRQVPQAQHISLTNFLD 000000000000000000000000000000000000000000000 SGLYTSLTERLVAAQRHTENEVKVKDSLKDSFDDS 00000000000000000------------------ >INSULIN; SWP:P67974; PDB:1VKTA GIVEQSCTSISSLYQLENYCN ------6-3------------ >NEUROTOXIN; SWP:P01492; PDB:1VNA_ KEGYLVKKSDGCKYDCFWLGKNEHCNTECKAKNQGGSYGYCYAFA 100001123221111111111111000000011111100001100 CWCEGLPESTPTYPLPNKSC 00001111111112233333 >VPU PROTEIN; SWP:P19554; PDB:1VPU_ LQIDRLIDRITERAEDSGNESEGDQEELSALVERGHLAPWDVDDL 221110000011100001011110111112222322100001224 >VACUOLAR TARGETING PEPTID; SWP:Q40378; PDB:1VTP_ SEYASKVDEYVGEVENDLQKSKVAVS 54322110000000000000112457 >DELTA-ATRACOTOXIN-HV1; SWP:P13494; PDB:1VTX_ CAKKRNWCGKTEDCCCPMKCVYAWYNEQGSCQSTISALWKKC 000000001221100000000000000000000000000000 >ARGONAUTE2; SWP:Q9VUQ5; PDB:1VYNA GAMAMPMIEYLERFSLKAKINNTTNLDYSRRFLEPFLRGINVVYT ---000000000000000000111000000000000000000000 PPQSFQSAPRVYRVNGLSRAPASSETFEHDGKKVTIASYFHSRNY 000000000000000000000000000001100000000000000 PLKFPQLHCLNVGSSIKSILLPIELCSIEEGQALNRKDGATQVAN 000000000000000100000000000000--------------- MIKYAATS -------- >ORF K3; SWP:P90495; PDB:1VYXA MEDEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTIS 864210000000000000000000000000000000000000000 RNTACQICGVVYNTR 000000000000012 >ATP SYNTHASE COUPLING FAC; SWP:P02721; PDB:1VZSA NKELDPVQKLFVDKIREYRTKRQTSGGPVDAGPEYQQDLDRELFK 543222111100000000011123344433323211110000000 LKQMYGKADMNTFPNFTFEDPKFEVVEKPQS 0000011122332333457799999999999 >TYROSINE-PROTEIN KINASE L; SWP:P07948; PDB:1W1FA GSPEEQGDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHGEWWKAK -----2100000000000000000000000000000000000000 SLLTKKEGFIPSNYVAKLNT 00000000000000001236 >PHOSPHATIDYLINOSITOL 3-KI; SWP:P35169; PDB:1W1NA NELDVPEQVDKLIQQATSIERLCQHYIGWCPFW 532100000000000000000000000000000 >CONGLUTIN; SWP:Q647G9; PDB:1W2QA GPMRRERGRQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDS 999999999876531001001000000000000000112346678 YDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQ 888764321110000000001232111000000000000002211 DRQMVQQFKRELMSLPQQCNFRAPQRCDLDVSGGRCS 2110000000000000000112233323445443334 >PYRUVATE DEHYDROGENASE E2; SWP:Q8ZUR6; PDB:1W4IA GSREVAAMPAARRLAKELGIDLSKVKGTGPGGVITVEDVKRYAEE 864210000000000000000000000000000000000000000 TAKATAPAPAPKAVEKA 00124579999999999 >UBIQUITIN CARBOXYL-TERMIN; SWP:Q9Y4E8; PDB:1W6VA MGSSHHHHHHSSGLVPRGSHMMAEGGAADLDTQRSDIATLLKTSL ---------------------986420000000000000000001 RKGDTWYLVDSRWFKQWKKYVGFDSWDKYQMGDQNVYPGPIDNSG 111000000000000000000000001000000000000000000 LLKDGDAQSLKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIA 001111110001100000000000000000000000000000000 RKVVEQ 000122 >FASCICLIN-LIKE PROTEIN; SWP:Q3IXZ6; PDB:1W7DA ETGDIVETATGAGSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDA 000000000000000000000000000000000000000000000 AFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSSDLTEGMT 000000000000000000000000000000000000000000000 AETVEGGALTVTLEGGPKVNGVSISQPDVDASNGVIHVIDGVLMP 000000000000000000000000000000000000000000000 GA 00 >CHOLINE BINDING PROTEIN A; SWP:Q97N74; PDB:1W9RA GSHMPEKKVAEAEKKVEEAKKKAEDQKEEDRRNYPTNTYKTLELE 332211100000000000000000000001111111111110000 IAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATR 000000000000000001111221111000100000000000000 LEKIKTDRKKAEEEAKRKAAEEDKVKEKP 00000001111234556899999999999 >TRANSCRIPTION ELONGATION; SWP:P0AFF9; PDB:1WCNA GDNKPADDLLNLEGVDRDLAFKLAARGVCTLEDLAEQGIDDLADI 310000000000000000000000000000000000000000000 EGLTDEKAGALIMAARNICWFGDEA 0000000000000000000001356 >PTS SYSTEM, N,N'-DIACETYL; SWP:P69791; PDB:1WCRA AEELEEVVMGLIINSGQARSLAYAALKQAKQGDFAAAKAMMDQSR 000000000000000000000000000000000000000000000 MALNEAHLVQTKLIEGDAGEGKMKVSLVLVHAQLHLMTSMLAREL 000000000000000000000000000000000000000000000 ITELIELHEKLKA 0000000000000 >splicing factor, putative; SWP:Q8RXF1; PDB:1WE6A GSSGSSGKFDESALVPEDQFLAQHPGPATIRVSKPNENDGQFMEI 987654432111000000000000000000000001222100000 TVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHY 000000000000000000000000000000000000000000000 NVGAGEILTLSLRERSGPSSG 000000000000023568999 >Sf3a1 protein; SWP:Q8K4Z5; PDB:1WE7A GSSGSSGTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEWKLNG 887655321110000000000000000000000000120000000 QGLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNS 000000000000000000000000000000000000000000000 LAYYNMASGAVIHLALKERSGPSSG 0000000000000000012345789 >Tudor and KH domain conta; SWP:Q80VL1; PDB:1WE8A GSSGSSGILTENTPVFEQLSVPQRSVGRIIGRGGETIRSICKASG 765443311110000000000000000000000000000000000 AKITCDKESEGTLLLSRLIKISGTQKEVAAAKHLILEKVSEDEEL 000000111111100000000000000000000000000000000 RKRIAHSASGPSSG 00000124467899 >PHD finger family protein; SWP:O81488; PDB:1WE9A GSSGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAE 986432100000001111100000000000000000000000000 HIKQYKCPSCSNKSGPSSG 0000000000001246789 >PHD finger family protein; SWP:Q9C810; PDB:1WEEA GSSGSSGMERGVDNWKVDCKCGTKDDDGERMLACDGCGVWHHTRC 999999875432210000011111111100000000000000000 IGINNADALPSKFLCFRCIELSGPSSG 011111110000000000000124589 >RNA-binding protein 12; SWP:Q9NTZ6; PDB:1WELA GSSGSSGKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDF 999999999999999887653321000000000000000000000 FKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQY 000000000000000000000000000000000000000000000 MGNRFIQVHPITKKGMLEKIDMIRKRLQSGPSSG 0000000000000000000000000000124679 >Death associated transcri; SWP:Q8C9B9; PDB:1WEMA GSSGSSGECEVYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCV 999999997533221000000000010000000000000000000 GISEARGRLLERNGEDYICPNCTILSGPSSG 0000000000000000000000000013579 >inhibitor of growth famil; SWP:Q8C0D7; PDB:1WENA GSSGSSGDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFA 999999986542211000000000000000000000000000000 CVGLTTKPRGKWFCPRCSQESGPSSG 00000000000000000012468999 >cellulose synthase, catal; SWP:Q9SWW6; PDB:1WEOA GSSGSSGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPA 999999999753210000000000000000000000000000000 CRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDEDEEDIDSGP 000000000000000000000000000000001235799999999 SSG 999 >PHF8; SWP:NA; PDB:1WEPA GSSGSSGMALVPVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIE 999998632100000000000010000000000000000000000 EENAVDIDIYHCPDCEAVFGPSIMKNWHSGPSSG 0000000000000000000000000013467888 >PHD finger protein 7; SWP:Q9DAG9; PDB:1WEQA GSSGSSGELEPGAFSELYQRYRHCDAPICLYEQGRDSFEDEGRWR 999999999999765322110000000000000000000000000 LILCATCGSHGTHRDCSSLRPNSKKWECNECLPASGPSSG 0000000000000000000001000000000011234567 >RIKEN cDNA 1110020M19; SWP:Q9D168; PDB:1WEVA GSSGSSGADDFAMEMGLACVVCRQMTVASGNQLVECQECHNLYHQ 999999764321110000000000000010000000000000000 DCHKPQVTDKEVNDPRLVWYCARCTRQMKRMAQKNQKSGPSSG 0000000000000000000000000000013457999999999 >DNA-binding family protei; SWP:Q680Q4; PDB:1WEWA GSSGSSGEDPFQPEIKVRCVCGNSLETDSMIQCEDPRCHVWQHVG 999999754433210000000010000000000000000000000 CVILPDKPMDGNPPLPESFYCEICRLTSGPSSG 000012333322110000000000000135679 >HYPOTHETICAL PROTEIN (RIK; SWP:Q921F4; PDB:1WEXA GSSGSSGSHHKVSVSPVVHVRGLCESVVEADLVEALEKFGTICYV 999997654321000000000000000000000000000000000 MMMPFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTS 000000000000000000000000000000000000000000000 KRITRPGNSGPSSG 00000123467899 >calcipressin 1; SWP:NA; PDB:1WEYA GSSGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKS 653210000000000000000000000000000000000000000 FKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQTLHIGSSH 000000000000000000000000000000000000134679999 LAPPNPDKSGPSSG 99999999999999 >Heterogeneous nuclear rib; SWP:NA; PDB:1WEZA GSSGSSGSSFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPMRVH 999997664321110000000000000000000000000000000 IEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFLNS 000011000000000000000000000000000000000000000 TAGTSGSGPSSG 001234578999 >TAR DNA-binding protein-4; SWP:Q13148; PDB:1WF0A GSSGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFA 754210000000000000000000000000000000000000000 FVTFADDQIAQSLCGEDLIIKGISVHISNAEPKHNSNSGPSSG 0000000000000000000000000000000112234667778 >RNA-binding protein Raly; SWP:Q9UKM9; PDB:1WF1A GSSGSSGMSLKLQASNVTNKNDPKSINSRVFIGNLNTALVKKSDV 999999999999999998642111000000000000000000000 ETIFSKYGRVAGCSVHKGYAFVQYSNERHARAAVLGENGRVLAGQ 000000000000000000000000000000000000000000000 TLDINMAGEPKPDRSGPSSG 00000001357999999999 >Heterogeneous nuclear rib; SWP:P07910; PDB:1WF2A GSSGSSGKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVG 999999999765310000000000000000000000000000000 CSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKV 000000000000000000000000000000000000000000011 NRSGPSSG 24679999 >sidekick 2 protein; SWP:Q58EX2; PDB:1WF5A GSSGSSGRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFD 999997654443110000000000000000000000000000000 GNSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVPARSYQ 000000000000001000000000000000000000000000000 FRLCAVNDVGKGQFSKDTERVSLPESGPSSG 0000000000000000000000000124689 >Similar to S.pombe -rad4+; SWP:Q92547; PDB:1WF6A GSSGSSGSESICNSLNSKLEPTLENLENLDVSAFQAPEDLLDGCR 999999999999997531100000000000000000000000000 IYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDEL 000000000000000000000000000000000000000000000 KQFWNKSAHRPHVVGAKWLLECFSKGYMLSEEPYIHSGPSSG 000000000000000000000000000000000000012456 >Enigma homologue protein; SWP:NA; PDB:1WF7A GSSGSSGSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQA 986420000000000000000000000000000000000000000 HVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRASAA 000000000000000000000000000000010000000000123 AKSEPVSSGPSSG 4578999999999 >Neurabin-I; SWP:Q9ULJ8; PDB:1WF8A GSSGSSGLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVK 976532000000000000000000000000000010000000000 TVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKG 000000000000000000000000000000000000000000000 NVRFVIGREKPSGPSSG 00000000000123445 >NPL4 family protein; SWP:NA; PDB:1WF9A GSSGSSGTMLRVRSRDGLERVSVDGPHITVSQLKTLIQDQLQIPI 987542100000000000000000000000000000000000000 HNQTLSTNRNLLLAKSPSDFLAFTDMADPNLRISSLNLAHGSMVY 000000000000000000000000000000000000000000000 LAYEGERTIRGSGPSSG 00000000011234689 >Hypothetical protein 1500; SWP:Q8VDV8; PDB:1WFDA GSSGSSGQDSDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDML 999998653100000000000000000000000000000000000 LQVLKGTKESSKRCVLRTKISGYMDRAENIKKYLDQEKEDGKSGP 000000000000000000000000000000000000000123568 SSG 999 >RIKEN cDNA 2310008M20 pro; SWP:Q8BFR6; PDB:1WFEA GSSGSSGCSEVNVVKERPKTDEHKSYSCSFKGCTDVELVAVICPY 999999999999999999754210000000000000000000000 CEKNFCLRHRHQSDHDCEKLEVAKPRMAATQKLVRSGPSSG 00000000000000000000012344579999999999999 >RIKEN cDNA 2810002D23 pro; SWP:NA; PDB:1WFFA GSSGSSGIHHLPPVKAPLQTKKKIMKHCFLCGKKTGLATSFECRC 999999999999999987654321100000000001110000000 GNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPSSG 0000000000000000001112346899999999999999 >Regulating synaptic membr; SWP:Q9UQ26; PDB:1WFGA GSSGSSGHSHSDKHPVTWQPSKDGDRLIGRILLNKRLKDGSVPRD 999999987542100000000000000000000000011010011 SGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEV 100000000000000000000000000000000000000000000 LEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSGPSSG 00000000000000000000000000000000000012467 >zinc finger (AN1-like) fa; SWP:Q9SJM6; PDB:1WFHA GSSGSSGQPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYP 999987765433211000000000012100000000000000000 EVHGCTFDFKSAGSGPSSG 0000012457899999999 >nuclear distribution gene; SWP:O35685; PDB:1WFIA GSSGSSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHL 999764310000000000000000000000000000000000000 RVGLKGQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLEKINKME 000000000000000000000000000000000000000000000 WWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVSGPSSG 00000000111245568999999999999999999999999 >putative elicitor-respons; SWP:NA; PDB:1WFJA GSSGSSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQK 976421000000000000000001110000000000000000000 SNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTEDDAVG 000000000000000000000000000000000000000000000 EATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPSGPSS 000000000000000000000000000000000000000001245 G 6 >zinc finger, FYVE domain; SWP:NA; PDB:1WFKA GSSGSSGMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSAL 999653210000000000000000000000000000000000000 VPRAGNTQQKVCKQCHTILTRGSSDNASKWSPPQNYKSGPSSG 0000000000000000000001356689999999999999999 >Zinc finger protein 216; SWP:O88878; PDB:1WFLA GSSGSSGPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCG 999999999999999999754221100000000000000000000 NLFCGLHRYSDKHNCPYDYKAEASGPSSG 00000000000000000000112457899 >synaptotagmin XIII; SWP:Q7L8C5; PDB:1WFMA GSSGSSGSWNQAPKLHYCLDYDCQKAELFVTRLEAVTSNHDGGCD 986654332100000000000000000000000000012222100 CYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTA 000000000000000000000000000000000000000000000 TLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSGP 000000000122222100000000000000000000000000236 SSG 789 >sidekick 2; SWP:Q58EX2; PDB:1WFNA GSSGSSGPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKN 999999886543210000000000000000000000000000000 GILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIE 000000000000000000000000000000000000000000000 VAAMTSKGQGQVSASTISSGVPPSGPSSG 00000000000000000000000124457 >sidekick 2; SWP:Q58EX2; PDB:1WFOA GSSGSSGRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVR 999999999999999999765332100000000000000000000 LIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQYTAT 000000000000000000000000111100000000000000000 GLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRSGPSSG 0000000000000000000000000000000012346789 >zinc finger (AN1-like) fa; SWP:Q6NNI8; PDB:1WFPA GSSGSSGTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCG 999999999865432333334321000000000000000000000 STFCGTHRYPESHECQFDFKGVASGPSSG 00000000000000000001345679999 >UNR protein; SWP:O75534; PDB:1WFQA GSSGSSGGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFH 999999999996431100000000000000000000000000000 CSQYNGNLQDLKVGDDVEFEVSSDRRTGKPIAVKLVKISGPSSG 00000000000000000000000000000000000000012346 >1700129L13Rik protein; SWP:Q9D968; PDB:1WFTA GSSGSSGPGAPSTVRISKNVDGIHLSWEPPTSPSGNILEYSAYLA 976421010000000000000000000000111111010000000 IRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHIDYTSRPA 012345554321000000000000000000000000000111000 IVFRISAKNEKGYGPATQIRWLQGNSKSGPSSG 000000001010000000000012356799999 >unnamed protein product; SWP:NA; PDB:1WFUA GSSGSSGMEPHKVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQ 998754432121110000000000000000000000000011112 GPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKF 100000000000000000000000000000000000000000000 RLKVTSPSGEYEYSPVVSVATTRESGPSSG 000000000000000000000000135689 >membrane associated guany; SWP:Q86UL8; PDB:1WFVA GSSGSSGQDFDYFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAE 987654321100000000001100000000000000000000000 DGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRL 000000000000000000000000100000000000000000000 LLKRGTGSGPSSG 0000123556789 >Kalirin-9a; SWP:Q8BTT9; PDB:1WFWA GSSGSSGSTMTVIKDYYALKENEICVSQGEVVQVLAVNQQNMCLV 876431000000000000000000000000000000000000000 YQPASDHSPAAEGWVPGSILAPFSGPSSG 00000010000000000000000113468 >regulator of G-protein si; SWP:P97492; PDB:1WFYA GSSGSSGDQEVRLENRITFQLELVGLERVVRISAKPTKRLQEALQ 999999999775421000000000110000000000000000000 PILAKHGLSLDQVVLHRPGEKQPMDLENPVSSVASQTLVLDTPPD 000000000000000000001000000000000000000000001 AKMSEARSSGPSSG 13467899999999 >nitrogen fixation cluster; SWP:Q9D7P6; PDB:1WFZA GSSGSSGENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDE 998655432110011000000000000000000000000000000 KGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNTDIA 000000000000000000000000000000000000000000000 KELCLPPVKLHCSMLAEDAIKAALADYKLKQESKSGPSSG 0000000000000000000000000000000013467899 >KIAA1579 protein; SWP:Q9HCJ3; PDB:1WG1A GSSGSSGILVKNLPQDSNCQEVHDLLKDYDLKYCYVDRNKRTAFV 643200000000000000000000000000000000000000000 TLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDALLCSGPSSG 0000000000000000000000000000001233578999999 >zinc finger (AN1-like) fa; SWP:Q9SZ69; PDB:1WG2A GSSGSSGPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYP 999999987533100000000000000000000000000000000 EKHECSFDFKEVGSGPSSG 0000000001246899999 >HYPOTHETICAL PROTEIN (RIK; SWP:Q9D0B0; PDB:1WG4A GSSGSSGGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYA 999998764432110000000000000000000000000000000 DVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYPE 000000000000000000000000000000000000000000000 RSSGPSSG 13457899 >Heterogeneous nuclear rib; SWP:P55795; PDB:1WG5A GSSGSSGNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNG 999999986643200000000000000000000000000000000 MTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFK 000000000000000000000000000000000000000000000 SSRAEVRTSGPSSG 00000012247899 >HYPOTHETICAL PROTEIN (RIK; SWP:Q5SV54; PDB:1WG6A GSSGSSGLKGEPDCYALSLESSEQLTLEIPLNDSGSAGLGVSLKG 999999999999999986431000000000000000000000000 NKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLG 000000000000000000000000000000000000000000000 KSNHEAMETLRRSMSMEGNIRGMIQLVILRRSGPSSG 0000000000000000000000000000000123468 >Dedicator of cytokinesis; SWP:Q9BZ29; PDB:1WG7A GSSGSSGAASLGSQKGGITKHGWLYKGNMNSAISVTMRSFKRRFF 999999999997533200000000000101111000011000000 HLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQNNKVRRF 000001100000000000000000000000000000000000010 AFELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEAAMQEKR 000000001000000000000000000000000000000000011 NGDSHEDDESGPSSG 235899999999999 >Homocysteine-responsive e; SWP:Q15011; PDB:1WGDA GSSGSSGVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPE 865321000000000122100000000000000000000000000 RPRPEDQRLIYSGKLLLDHQCLRDLLPKQEKRHVLHLVCNVKSGP 000000000001000010100000000111100000000023456 SSG 899 >Hypothetical protein 2610; SWP:Q8K0W9; PDB:1WGEA GSSGSSGMAVFHDEVEIEDFQYDEDSETYFYPCPCGDNFAITKED 976543100000000000000000000000000000000000000 LENGEDVATCPSCSLIIKVIYDKDQFMCGETVSGPSSG 00000000000000000000000000001245689999 >Upstream Binding Factor 1; SWP:P25976; PDB:1WGFA GSSGSSGKPSQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPE 999999999999999986544210000000000000000000000 LSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKSGPSSG 000000000000000000000000000000000011246899999 >Ubiquitin carboxyl-termin; SWP:Q9JMA1; PDB:1WGGA GSSGSSGYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQP 654321000000000000000000000000000000000000000 ARQKVMVKGGTLKDDDWGNIKMKNGMTVLMMGSADALPEEPSAKT 000000000000000000100000000000001012457899999 SGPSSG 999999 >ubiquitin-like 3; SWP:NA; PDB:1WGHA GSSGSSGMSSHVPADMINLRLILVSGKTKEFLFSPNDSASDIAKH 999876543200000000000001210000000000000000000 VYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGKT 000112222233333222100000000000000000000000000 TVMHLVARETLPEPNSQGQRSGPSSG 00000001234567789999999999 >RIKEN cDNA 2900073H19 pro; SWP:NA; PDB:1WGKA GSSGSSGMAAPLCVKVEFGGGAELLFDGVKKHQVALPGQEEPWDI 999864200000000000000000000000000000000000000 RNLLVWIKKNLLKERPELFIQGDSVRPGILVLINDADWELLGELD 000000000000000000000000000000000000000000000 YQLQDQDSILFISTLHGGSGPSSG 000000000000000135689999 >Toll-interacting protein; SWP:Q9H0E2; PDB:1WGLA GSSGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINS 987532100000000000000000000000000000000000000 LLQMGEEPSGPSSG 00001247899999 >Ubiquitin conjugation fac; SWP:Q14139; PDB:1WGMA GSSGSSGLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTV 999999999974311000000000000000000000000000000 DRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERK 000000000000000000000000000000000000000000000 QQSGPSSG 12357999 >ubiquitin associated prot; SWP:Q9NZ09; PDB:1WGNA GSSGSSGAYSELQMLSPSERQCVETVVNMGYSYECVLRAMKKKGE 876543210000000000000000000000000000000000000 NIEQILDYLFAHSGPSSG 000000000000125568 >VPS10 domain-containing r; SWP:Q96PQ0; PDB:1WGOA GSSGSSGCEGGVDMQQSQVQLQCPLTPPRGLQVSIQGEAVAVRPG 999999999999999999998532110000000000000000000 EDVLFVVRQEQGDVLTTKYQVDLGDGFKAMYVNLTLTGEPIRHRY 000000000011221100000000000000000000000000000 ESPGIYRVSVRAENTAGHDEAVLFVQVSGPSSG 000000000000000000000000000011357 >Probable cyclic nucleotid; SWP:O82226; PDB:1WGPA GSSGSSGVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGD 765433312110000000000000000000000000000000000 PVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWA 000000000000000001134432100000000000000000000 LDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQFRRSGPS 000012100000000000000000000000000000000135688 SG 99 >FYVE, RhoGEF and PH domai; SWP:Q69ZL1; PDB:1WGQA GSSGSSGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASEDV 654332100000000000000000000000000000000000100 AALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHS 000000000000000011111100000000000000000000000 TQRWIDAFQEGTVSGPSSG 0000000000000013467 >Growth factor receptor-bo; SWP:Q14451; PDB:1WGRA GSSGSSGRPHVVKVYSEDGACRSVEVAAGATARHVCEMLVQRAHA 998652100000000000000000000000000000000013443 LSDETWGLVECHPHLALERGLEDHESVVEVQAAWPVGGDSRFVFR 321110000000000000000000000000000001100000000 KNFASGPSSG 0002468999 >MYST histone acetyltransf; SWP:Q9D1P2; PDB:1WGSA GSSGSSGEPEVTVEIGETYLCRRPDSTWHSAEVIQSRVNDQEGRE 999876432100000000000000010000000000000000000 EFYVHYVGFNRRLDEWVDKNRLALTKTVKDAVQKNSEKYLSELAE 000000011111100000000000012223466789999999999 QPERKITRNQKRKHDEINHVQKTYAEMDPTTAALEKESGPSSG 9999999999999999999999999999999999999999999 >amyloid beta (A4) precurs; SWP:Q9DBR4; PDB:1WGUA GSSGSSGPTPKTELVQKFRVQYLGMLPVDRPVGMDTLNSAIENLM 998766554432100000000000000000000000000000000 TSSSKEDWPSVNMNVADATVTVISEKNEEEVLVECRVRFLSFMGV 000000000000000000000000000000000000000000000 GKDVHTFAFIMDTGNQRFECHVFWCEPNAANVSEAVQAACSGPSS 000000000000011000000000000000000000000003678 G 9 >KIAA1068 protein; SWP:Q8IVD9; PDB:1WGVA GSSGSSGQKNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGK 999999997543233211110000000000000000000000000 QVSVALSSSSIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPG 000000000000000000100000000000000000000000000 KCVLVNLSKVGEYWWNAILEGEEPIDIDSGPSSG 0000000000111100000010011124579999 >'Signal Recoginition Part; SWP:NA; PDB:1WGWA GSSGSSGADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLE 987643200000000000000000000000000000000000000 ADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKV 000000000000000000000111222100000000000000022 KVYSGPSSG 356899999 >KIAA1903 protein; SWP:Q6P0N0; PDB:1WGXA GSSGSSGDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRS 999765421000000000000000000000000000000000000 PEECQRKYMENPRGKGSQKHVTSGPSSG 0000000000001234567999999999 >Rap guanine nucleotide ex; SWP:Q92565; PDB:1WGYA GSSGSSGEEIFCHVYITEHSYVSVKAKVSSIAQEILKVVAEKIQY 999864210000000000000000000000000000000000000 AEEDLALVAITFSGEKHELQPNDLVISKSLEASGRIYVYRKDLAD 000000000001100000000000011233332000000001211 TLNPFAENSGPSSG 11000135799999 >Ubiquitin carboxyl-termin; SWP:O94966; PDB:1WH0A GSSGSSGVDEPESMVNLAFVKNDSYEKGPDSVVVHVYVKEICRDT 998765321000000000000000000000000000000000000 SRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIE 000000000000000000000000000000000000000000000 PEQCTFCFTASRIDICLRKRQSQRWGGLEAPAARVGGASGPSSG 00000000000000000000000000000001356899999999 >KIAA1095 protein; SWP:Q9UPQ7; PDB:1WH1A GSSGSSGDIHQEMDREELELEEVDLYRMNSQDKLGLTVCYRTDDE 000000000000000000000000000000000000000000000 DDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVAL 000000000000000000000000000000000000000000000 LTSEENKNFSLLIARPELQLDEGWMDDDSGPSSG 0000000000000000000000000000000000 >Hypothetical protein At5g; SWP:Q9FT92; PDB:1WH2A GSSGSSGVRVLSYDKEKLNWLYKDPQGLVQGPFSLTQLKAWSDAE 999876543211000000000000000000000000000000000 YFTKQFRVWMTGESMESAVLLTDVLRLSGPSSG 000000000000000000000000000012578 >59 kDa 2'-5'-oligoadenyla; SWP:Q15646; PDB:1WH3A GSSGSSGIQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPK 865421000000000000000000000000000000000000000 KQQQLEFQGQVLQDWLGLGIYGIQDSDTLILSKKKGSGPSSG 000000000000000000000000000000000011345678 >ZF-HD homeobox family pro; SWP:Q9FKP8; PDB:1WH5A GSSGSSGSSAEAGGGIRKRHRTKFTAEQKERMLALAERIGWRIQR 999999999999986532211000000000000000000000000 QDDEVIQRFCQETGVPRQVLKVWLHNNKHSGPSSG 00000000000000000000000000001357999 >Homeobox protein Cux-2; SWP:O14529; PDB:1WH6A GSSGSSGQYELYMYREVDTLELTRQVKEKLAKNGICQRIFGEKVL 987542210000000000000000000000000000000000000 GLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLSDQLGQAVGQ 000000000000000000000000000000000000000124799 QPGASSGPSSG 99999999999 >ZF-HD homeobox family pro; SWP:Q9SB61; PDB:1WH7A GSSGSSGSNPSSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQK 999999999999999975321000000000000000000000000 HDDVAVEQFCAETGVRRQVLKIWMHNNKNSGPSSG 00000000000000000000000000001346678 >Homeobox protein Cux-2; SWP:O14529; PDB:1WH8A GSSGSSGYSGSQAPGGIQEIVAMSPELDTYSITKRVKEVLTDNNL 999999999864331000000000000000000000000000000 GQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWL 000000000000000000000000000000000000000000000 NDPHNVEKLRDMKKLSGPSSG 000000000000014678899 >40S ribosomal protein S3; SWP:P23396; PDB:1WH9A GSSGSSGFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATR 986542000000000000000000000000000000000000000 TQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGSGPS 000000000000000000000000000000000000012467899 SG 99 >KIAA0147 protein; SWP:Q14160; PDB:1WHAA GSSGSSGRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRI 965310000000000112210000000111000000000000000 AEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAASPTI 000000000000000000000000000000000000000000000 ALLLEREAGSGPSSG 000000012344579 >UBA/UBX 33.3 kDa protein; SWP:Q922Y1; PDB:1WHCA GSSGSSGAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWL 999975310000000000000000000000000000000000000 MEHEDDPDVDEPLSGPSSG 0000001112345678899 >Tubulin specific chaperon; SWP:Q9D1E6; PDB:1WHGA GSSGSSGNEELRAQQEAEAAQRLSEEKAQASAISVGSRCEVRAPD 999998654432221111111111000000100000000000111 HSLRRGTVMYVGLTDFKPGYWVGVRYDEPLGKNDGSVNGKRYFEC 111000000000111111100000001111000000111110000 QAKYGAFVKPSAVTVGDSGPSSG 01000000000000001235789 >CLIPR-59; SWP:Q9DB67; PDB:1WHHA GSSGSSGKSPSSPSLGSLQQREGAKAEVGDQVLVAGQKQGIVRFY 999999999999999999864311000000000000000000000 GKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCAPRHGVFAPAS 000000000000000000000000000000000000000000000 RIQRIGSGPSSG 000001357899 >RIKEN cDNA 1700024K14; SWP:Q8CI96; PDB:1WHJA GSSGSSGLPNSDHTTSRAMLTSLGLKLGDRVVIAGQKVGTLRFCG 999999999865421111000000000000000000000000000 TTEFASGQWAGIELDEPEGKNNGSVGRVQYFKCAPKYGIFAPLSK 000000000000000000000000000000000000000000000 ISKLKDSGPSSG 000013468999 >RIKEN cDNA 1700024K14; SWP:Q8CI96; PDB:1WHKA GSSGSSGEGTVKLHEGSQVLLTSSNEMATVRYVGPTDFASGIWLG 999999986431010000000000000000000000000000000 LELRSAKGKNDGAVGDKRYFTCKPNYGVLVRPSRVTYRGISGPSS 000000000000000000000000000000000000123568999 G 9 >Cylindromatosis tumor sup; SWP:Q9NQC7; PDB:1WHLA GSSGSSGIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIF 987542000000000000000000000000000011345432100 FGVELLEEGRGQGFTDGVYQGKQLFQCDEDCGVFVALDKLELIES 000000000000000000000000000000000000000000012 GPSSG 46899 >Cylindromatosis tumor sup; SWP:Q9NQC7; PDB:1WHMA GSSGSSGPPLEINSRVSLKVGETIESGTVIFCDVLPGKESLGYFV 998652100000000000000000000000000000000000000 GVDMDNPIGNWDGRFDGVQLCSFACVESTILLHINDIIPESSGPS 000000000000000000000000000000000000000024579 SG 99 >hypothetical protein RIKE; SWP:Q9D7B1; PDB:1WHNA GSSGSSGSGIIKMAIRFDRRAYPPQITPKMCLLEWCRREKLPQPV 999765420000000000000000000000000000000000000 YETVQRTIDRMFCSVVTVAEQKYQSTLWDKSKKLAEQTAAIVCLR 000000000000000000000000000000000000000000000 SQGLPEGRLGEESPSLNKRKREAPDQDPGGPRSGPSSG 00000011122345677889999999999999999999 >RNA helicase A; SWP:NA; PDB:1WHQA GSSGSSGIKNFLYAWCGKRKMTPAYEIRAVGNKNRQKFMCEVRVE 975431000000000000000000000000000000000000000 GFNYAGMGNSTNKKDAQSNAARDFVNYLVRINEVKSEEVPAVGIV 000000000000000000000000000000000000000001246 PPPSGPSSG 799999999 >Hypothetical KIAA1002 pro; SWP:Q9Y2K5; PDB:1WHRA GSSGSSGTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFIN 999999876543100000000000000000000000000000000 DNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKT 000000000000000000000000000000000011010000000 SNTRIPEQRFSEHIKDEKNTEFQQRFILSGPSSG 0000000000001112345677899999999999 >polynucleotide phosphoryl; SWP:Q8K1R3; PDB:1WHUA GSSGSSGPQKIFTPSAEIVKYTKIIAMEKLYAVFTDYEHDKVSRD 999998654211000000000000000000000001111221110 EAVNKIRLDTEEHLKEKFPEVDQFEIIESFNIVAKEVFRSIILNE 000000000000000000000000000000000000000000122 YKRCDGRDSGPSSG 34689999999999 >poly(A)-specific ribonucl; SWP:Q8VDG3; PDB:1WHVA GSSGSSGGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQIS 999999999864310000000000000000000000000000000 WIDDTSAFVSLSQPEQVQIAVNTSKYAESYRIQTYAEYVGKKQKG 000000000000000000000000000000000000000000123 KQVKSGPSSG 4467899999 >hypothetical protein RIKE; SWP:Q8R3C6; PDB:1WHWA GSSGSSGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSL 987542110000000000000000000000000000000000000 TKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKE 000000000000000000000000000000000000000001234 ASQSGPSSG 567899999 >hypothetical protein RIKE; SWP:Q8R3C6; PDB:1WHXA GSSGSSGRSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEG 976554321111001111222111111111111111111111222 GITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGVFGAAP 211110111111101111111121112221111111122222323 QKKDSQHEQPAEKAESGPSSG 222233445678899999999 >hypothetical protein RIKE; SWP:Q6PHZ5; PDB:1WHYA GSSGSSGKIGYGKANPTTRLWVGGLGPNTSLAALAREFDRFGSIR 999999765432100000000000000000000000000000000 TIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFA 000000000000000000000000000000000000000000000 KSGPSSG 1224567 >Mitogen activated protein; SWP:Q9WVS7; PDB:1WI0A GSSGSSGPFCAMENQVLVIRIKIPNSGAVDWTVHSGPQLLFRDVL 999999999997531000000000010000000000000000000 DVIGQVLPEATTTAFEYEDEDGDRITVRSDEEMKAMLSYYYSTVM 000000000001000000000000000000000000000000000 EQQVNGQLIEPLQIFPRSGPSSG 00000000000000000012335 >calcium-dependent activat; SWP:Q9ULU8; PDB:1WI1A GSSGSSGMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSY 876542100000000000000000000000000000000000000 REKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIF 011100000000000000000000000100000000000000000 ASDDEQDRILWVQAMYRATGQSHKPVPPTQSGPSSG 000000000000000000000000000012357899 >RIKEN cDNA 2700099C19; SWP:Q9CZG9; PDB:1WI2A GSSGSSGNNELTQFLPRIVTLKKPPGAQLGFNIRGGKASQLGIFI 999998766543211000000011221100000001222210000 SKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKTARE 000000000000000000000000000000000000000000000 ISMRVRFFSGPSSG 00000000134579 >DNA-binding protein SATB2; SWP:Q9UPW6; PDB:1WI3A GSSGSSGPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQL 999999999753100000000000000000000000000000000 DLPKHTIIKFFQNQRYHVKHSGPSSG 00000000000000001123579999 >syntaxin binding protein; SWP:Q9WV89; PDB:1WI4A GSSGSSGSPLDRDPAFRVITVTKETGLGLKILGGINRNEGPLVYI 999999754320000000000000000000000000000000000 HEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAK 000000000000000000000000000000000000000000000 LRSESPWEIAFIRSGPSSG 0110000000000013579 >RRP5 protein homolog; SWP:Q14690; PDB:1WI5A GSSGSSGKNVNRVLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDG 999999998764321111000000000000000000000000001 TRAFLPLLKAQEYIRQKNKGAKLKVGQYLNCIVEKVKGNGGVVSL 000000000000000000000000000000000000011000000 SVGHSEVSTAIATEQQSWNLNNLSGPSSG 00113467999999999999999999999 >Hypothetical protein (RIK; SWP:Q9CW46; PDB:1WI6A GSSGSSGILIRGLPGDVTNQEVHDLLSDYELKYCFVDKYKGTAFV 653211000000000000000000000000000000000000000 TLLNGEQAEAAINTFHQSRLRERELSVQLQPTDALLCSGPSSG 0000000000000000000000000000000111246899999 >SH3-domain kinase binding; SWP:Q8R550; PDB:1WI7A GSSGSSGRRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEG 997532000000000000000000000000000000000000000 VLNGKTGMFPSNFIKELSGPSSG 00000000000000000024699 >Eukaryotic translation in; SWP:P23588; PDB:1WI8A GSSGSSGSRLPKSPPYTAFLGNLPYDVTEESIKEFFRGLNISAVR 665433211001000000000000000000000000000000000 LPREPSNPERLKGFGYAEFEDLDSLLSALSLNEESLGNKRIRVDV 000011111000000000000000000000000000000000000 ADQAQDKDSGPSSG 01123445678999 >Protein C20orf116 homolog; SWP:Q80WW9; PDB:1WI9A GSSGSSGFLTEFINYIKKSKVVLLEDLAFQMGLRTQDAINRIQDL 986432000000000000000000000000000000000000000 LTEGTLTGVIDDRGKFIYITPSGPSSG 000000000000000000011246689 >hypothetical ubiquitin-li; SWP:Q3V209; PDB:1WIAA GSSGSSGINVRLKFLNDTEELAVARPEDTVGTLKSKYFPGQESQM 865421000000000000000000000000000000000000000 KLIYQGRLLQDPARTLSSLNITNNCVIHCHRSPPGAAVSGPSASS 000000000000000000000000000000000112335688999 GPSSG 99999 >60S ribosomal protein L12; SWP:NA; PDB:1WIBA GSSGSSGPPKFDPNEVKVVYLRCTGGEVGATSALAPKIGPLGLSP -9--9-999985421000000000001122211001101110000 KKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALSGPS 000000000000000000000000000000000001234668999 SG 99 >Hypothetical Protein RIKE; SWP:Q9CWP6; PDB:1WICA GSSGSSGKKPLSVFKGPLLHISPAEELYFGSIESGEKKTLIVLTN 999997542210000000000000000001233421000000000 VTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASIDIIVSPHGGLTV 000000000000000000000000000000000000000011101 SAQDRFLIMAAEMEQSSGTGPAELSQFWKEVPRNKVMEHRLRCHT 000000000000000101000000000000000000000000001 VESSKPNSLMLSGPSSG 24578999999999999 >DNA-binding protein RAV1; SWP:Q9ZWM9; PDB:1WIDA GSSGSSGRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSS -------31000000000000001111000000000000001234 NVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEK 544321000000000000000000001210000000000000000 NLRAGDVVSFSRSNGQDQQLYIGWKSRSGSDLDASGPSSG 0000000000000012210000000013468889------ >RIM binding protein 2; SWP:O15034; PDB:1WIEA GSSGSSGTSKQRYSGKVHLCVARYSYNPFDGPNENPEAELPLTAG 999997654322110000000000000000000000000000000 KYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQDNESRLAST 000000000000000000000000000000000001134578999 SGPSSG 999999 >RIKEN cDNA 4930408O21; SWP:Q9D9M4; PDB:1WIFA GSSGSSGSKNEKEQLSKAKASVSSLNKVIQTKLTVGNLGLGLVVI 999999999999999999976443210000000000000000000 QNGPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREF 000000000000000000000000000000000000000000000 LKLLQNITIGTVLQIKAYRGFLEIPQEWQDSGPSSG 000000000000000000000000000012235567 >KIAA1808 protein; SWP:Q6H8Q1; PDB:1WIGA GSSGSSGCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEGE 866431000000000110000000000000000000000000000 EMYLQGSSIWHPACRQAARTEDSGPSSG 0000000000000000000123467899 >mitochondrial ribosome re; SWP:Q9D6S7; PDB:1WIHA GSSGSSGLDHITVVTADGKVALNQIGQISMKSPQVILVNMASFPE 975311000000000100000000000000000000000000000 CTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTSGPSSG 000000000000000000000000000000135789999 >Hypothetical UPF0222 prot; SWP:P60003; PDB:1WIIA GSSGSSGRKPPPKKKMTGTLETQFTCPFCNHEKSCDVKMDRARNT 999999999999987543211000000000000000000000000 GVISCTVCLEEFQTPITYLSEPVDVYSDWIDACESGPSSG 0000000000000000000000000000000000135789 >ETHYLENE-INSENSITIVE3-lik; SWP:O23116; PDB:1WIJA GSSGSSGSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTP -------21000000000000000000000000001111110000 PPWWPTGNEEWWVKLGLPKSQSPPYRKPHDLKKMWKVGVLTAVIN 000000000000000000000000001111000000000000000 HMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQS 00000000000001112112211110000000000001122344- GPSSG ----- >Thioredoxin-like protein; SWP:Q9CQM9; PDB:1WIKA GSSGSSGLKVLTNKASVMLFMKGNKQEAKCGFSKQILEILNSTGV 997532000000000000000000000112200000000000000 EYETFDILEDEEVRQGLKTFSNWPTYPQLYVRGDLVGGLDIVKEL 000000000000000000000000000000011100000000000 KDNGELLPILKGESGPSSG 0000000000012468999 >KIAA1045 protein; SWP:Q9UPV7; PDB:1WILA GSSGSSGPREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLR 999999998754221110000111111110111111100000000 RMGYIQGDSAAEVTEMAHTETGWSCHYCDNINLLLTEESGPSSG 00000134555644322344422111223456789999999999 >KIAA0161 protein; SWP:P50876; PDB:1WIMA GSSGSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKE 642110000000000000000000000000000000000000000 GLETAISCPDAACPKQGHLQENEIECMVAAEIMQRYKKLQFERSG 000000000000000000000000000000000000000000112 PSSG 4689 >Flotillin 2; SWP:NA; PDB:1WINA GSSGSSGQRISLEIMTLQPRCEDVETAEGVALTVTGVAQVKIMTE 776543322111000000000000000000000000000000001 KELLAVACEQFLGKNVQDIKNVVLQTLEGHLRSILGTLTVEQIYQ 111000000000100000000000000000000000000000000 DRDQFAKLVREVAAPDVGRMGIEILSFTIKDVYDKVDYLSSLGKT 000000000000000000000000000000000000001111235 QTSGPSSG 68999999 >Protein arginine N-methyl; SWP:Q922H1; PDB:1WIRA GSSGSSGEPAHGRQHTPCLFCDRLFASAEETFSHCKLEHQFNIDS 999999999863100000000000000000000000000000000 MVHKHGLEFYGYIKLINFIRLKNPTVEYMNSIYNPVPWEKDEYLK 000000000000000000000000000000000000000000000 PVLEDDLLLQFDVEDLYEPVSTPFSSGPSSG 0000000000000000012356999999999 >KIAA1514 protein; SWP:Q58EX2; PDB:1WISA GSSGSSGTISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGK 999987665321000000000000000000000000000000000 TSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFT 000000000000000010000000000000000000000000000 CYSFRMRQVNIVGTSPPSQPSRKIQTLQSGPSSG 0000000000000000000000000000012457 >ubiquitin-specific protea; SWP:Q8L6Y1; PDB:1WIVA GSSGSSGLLSHMDDPDIDAPISHQTSDIDQSSVDTLLSFGFAEDV 999999999999999999999986410000000000000000000 ARKALKASGGDIEKATDWVFNNSGPSSG 0000000000000000000001246799 >Hook homolog 1; SWP:Q8BIL5; PDB:1WIXA GSSGSSGLPLCDSLIIWLQTFKTASPCQDVKQLTNGVTMAQVLHQ 764321000000000000000000000000000000000000000 IDVAWFSESWLSRIKDDVGDNWRIKASNLKKVLHGITSYYHEFLG 000000000000000000000000000000000000000000000 QQISEELIPDLNQITECADPVELGRLLQLILGCAVNCEKKQEHIK 000000000000000000000000000000000000000000000 NIMTLEESVQHVVMTAIQELMSKSGPSSG 00000000000000000000000112345 >DNA-binding protein SATB2; SWP:Q9UPW6; PDB:1WIZA GSSGSSGKPEPTNSSVEVSPDIYQQVRDELKRASVSQAVFARVAF 999999987543221000000000000000000000000000000 NRTQGLLSEILRKEEDPRTASQSLLVNLRAMQNFLNLPEVERDRI 000000000000000000000000000000000000000000000 YQDERSGPSSG 00000124567 >squamosa promoter-binding; SWP:Q9S7P5; PDB:1WJ0A GSAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQR --0000000000000000010000000000000000000000000 FCQQCSRFHVLEEFD 000001000001112 >Numb protein; SWP:Q9QZS3; PDB:1WJ1A GSSGSSGASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMH 999999998531000000000000000000000000000000000 ICEDAVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIE 000000000000000000000000000000000000000000000 KVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHA 000000000000000000000111100000000000000000000 VGCAFAACLERKQKRSGPSSG 000000000000013456899 >Probable WRKY transcripti; SWP:Q9XI90; PDB:1WJ2A GSSGSSGVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTT -------99986432222110000000000011000000000000 PGCGVRKHVERAATDPKAVVTTYEGKHNHDLPA 000000000000000100000000000001112 >KIAA1496 protein; SWP:Q9P232; PDB:1WJ3A GSSGSSGTVNVTTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAME 999999997653210000000000000000000000000000001 NESEVTGYKVFYRTSSQNNVQVLNTNKTSAELVLPIKEDYIIEVK 000000000000000000000000000000000000000000000 ATTDGGDGTSSEQIRIPRITSSGPSSG 000000000000000000012357899 >KIAA0794 protein; SWP:O94888; PDB:1WJ4A GSSGSSGTATNHQGLPAVDSEILEMPPEKADGVVEGIDVNGPKAQ 999999999999999999999999999999999999865421000 LMLRYPDGKREQITLPEQAKLLALVKHVQSKGYPNERFELLTNFP 000000010000000000000000000000000000000000001 RRKLSHLDYDITLQEAGLCPQETVFVQESGPSSG 0000000000000000000000000000013579 >hypothetical protein (RIK; SWP:Q8K2X3; PDB:1WJ5A GSSGSSGNKDNLDLAGLTSLLSEKIKEFLQEKKMQSFYQQELETV 999986532110000000000000000000000000000000000 ESLQSLASRPVTHSTGSDQVELKDSGTSGVAQRVFKNALQLLQEK 000000000001233444544443221100000000000000000 GLVFQRDSGSDKLYYVTTKDKDLQSGPSSG 000001110100000001357999999999 >Hypothetical protein (RSG; SWP:Q80X50; PDB:1WJ7A GSSGSSGNQNQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQ 999999999999998754221110000000001110000000000 LIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGK 000000000000000000000000000000013579999999999 KKGVSGQKSGPSSG 99999999999999 >HIV-1 INTEGRASE; SWP:P12497; PDB:1WJBA FLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQL 000000000000000000000000000000000000000000000 KGEAMHGQVD 1221224446 >Tudor domain containing p; SWP:Q9H7E2; PDB:1WJIA GSSGSSGVDEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLL 986421000000000000000000000000000000000000000 TSNKQKPVMGPPSGPSSG 001246999999999999 >hypothetical protein F20O; SWP:O49453; PDB:1WJJA GSSGSSGSTVKRKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVT 999999987655321000000000000000000000000001122 RKTRPASSLSRPSQPSRIVECLIGDETGCILFTARNDQVDLMKPG 235688888876531000000000000000000000000000000 ATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDNNLSL 000000000000000000000000000000000000000000000 VEYESGPSSG 0001357899 >C330018D20rik protein; SWP:Q9CWB7; PDB:1WJKA GSSGSSGNLSASNRALPVLTLFTKAPCPLCDEAKEVLQPYKDRFI 999999987643210000000000000000000000000000000 LQEVDITLPENSTWYERYKFDIPVFHLNGQFLMMHRVNTSKLEKQ 000000000000000000000000000000000000000000000 LRKLSGPSSG 0001245679 >Cypher protein; SWP:NA; PDB:1WJLA GSSGSSGMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKA 764210000000000000000000000000000000000000000 AQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKS 000000000000000000000000000000000000000000000 >beta-spectrin III; SWP:O15020; PDB:1WJMA GSSGSSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLG 998642000000000000000000000000000000000000000 FYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQ 000000000000000000000000000000000100000000000 DGKEYLFQAKDEAEMSSWLRVVNAAIASGPSSG 100000000000000000000000000012457 >Tubulin-folding protein T; SWP:Q8CIV8; PDB:1WJNA GSSGSSGQLLTLKIKCSNQPERQILEKQLPDSMTVQKVKGLLSRL 987431000000000000011000000000000000000000000 LKVPVSELLLSYESSKMPGREIELENDLQPLQFYSVENGDCLLVR 000000000000000000000000000000000000000000000 WSGPSSG 0013469 >T-plastin; SWP:P13797; PDB:1WJOA GSSGSSGNDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVD 999964210000000000000000000000000000000000000 LIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVYA 000000000000000000000000000000000000000000000 LPEDLVEVKPKMVMTVFACLMGRGMKRVSGPSSG 0000000000000000000000000124689999 >Zinc finger protein 295; SWP:Q9ULJ3; PDB:1WJPA GSSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVC 999999999997532211111111111111000000000110000 PYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQV 000000000000000000000000000000000000000000000 EVHNQNNMAPTSGPSSG 00011122223456899 >KIAA1798 protein; SWP:Q96JM7; PDB:1WJQA GSSGSSGVKPPHGFQKKMKLEVVDKRNPMFIRVATVADTDDHRVK 977654321100000000000000000000000000000000000 VHFDGWNNCYDYWIDADSPDIHPVGWCSKTGHPLQPPLSPLELME 000000010000000000000000000000000000000111223 ASEHGGCSTPGSGPSSG 46899999999999999 >KIAA1617 protein; SWP:Q5VUG0; PDB:1WJRA GSSGSSGPIDLITVGSLIELQDSQNPFQYWIVSVIENVGGRLRLR 544321000000000000000011000000000000000000000 YVGLEDTESYDQWLFYLDYRLRPVGWCQENKYRMDPPSEIYPLKM 000000011000000000000000000111110000000000000 ASEWKCTLEKSLIDAAKFPLPMEVFKDHADLSGPSSG 0000000000000000000000000012444556789 >KIAA1798 protein; SWP:Q96JM7; PDB:1WJSA GSSGSSGPYNKNGFKVGMKLEGVDPEHQSVYCVLTVAEVCGYRIK 999987653200000000000000000000000000000000000 LHFDGYSDCYDFWVNADALDIHPVGWCEKTGHKLHPPKGYKEEEF 000000000000000000000000000000000000000000010 NWQTYLKTCKAQAAPKSLFENQNITVIPSGFSGPSSG 0000000000000000000001135689999999999 >Transcription elongation; SWP:NA; PDB:1WJTA GSSGSSGMGLEEELLRIAKKLEKMVSRKKTEGALDLLKKLNSCQM 999986420000000000000000000000000000000000000 SIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPR 000000000000000000000100000000000000000001357 TTKGERESGPSSG 8999999999999 >NEDD8 ultimate buster-1; SWP:Q9Y5A7; PDB:1WJUA GSSGSSGDNYRTTGIATIEVFLPPRLKKDRKNLLETRLHITGREL 999998764321110000000000000111000000000000000 RSKIAETFGLQENYIKIVINKKQLQLGKTLEEQGVAHNVKAMVLE 000000000000000000000000000000000000000000000 LKQSSGPSSG 0123456789 >Cell growth regulating nu; SWP:NA; PDB:1WJVA GSSGSSGMVFFTCNACGESVKKIQVEKHVSNCRNCECLSCIDCGK 876542100000000000000000000000000000000000000 DFWGDDYKSHVKCISEGQKYGGKGYEAKSGPSSG 0000000000000123566788999999999999 >Phosphoacetylglucosamine; SWP:Q9CYR6; PDB:1WJWA GSSGSSGAIYVDLPNRQLKVKVADRRVISTTDAERQAVTPPGLQE 999987543210000000000011345567788765543210000 AINDLVKKYTLARAFVRPSGTEDIVRVYAEANSQESADRLAYEVS 000000000000000001233211000000000000000000000 LLVFQLAGGIGERPQPSGPSSG 0000000000121124667789 >1700030A21Rik protein; SWP:Q91ZF0; PDB:1WJZA GSSGSSGMALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYH 999999764542110000000000000000000000000000000 PDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 000001100000000000000000000000000000000000023 PSSG 6799 >KIAA0970 protein; SWP:Q9Y2H6; PDB:1WK0A GSSGSSGDEETKAFEALLSNIVKPVASDIQARTVVLTWSPPSSLI 997542000000000000000000000000000000000000000 NGETDESSVPELYGYEVLISSTGKDGKYKSVYVGEETNITLNDLK 000000000000000000000000100000000000000000000 PAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRISGPS 000000000000000000000000000000001112346899999 SG 99 >Hypothetical protein yk10; SWP:Q19853; PDB:1WK1A GSSGSSGVKFLTVNDDILSMPQARNFCASAGGYLADDLGDDKNNF 865432000000000000000000000000000000000000000 YSSIAANTQFWIGLFKNSDGQFYWDRGQGINPDLLNQPITYWANG 000000000000000000000000000000000000000000000 EPSNDPTRQCVYFDGRSGDKSKVWTTDTCATPRPFICQKHRYDSD 000000000000000000000000000000000000000023468 HKPNTIGDASGPSSG 999999999999999 >YEAST KILLER TOXIN; SWP:P10410; PDB:1WKT_ GDGYLIMCKNCDPNTGSCDWKQNWNTCVGIGANVHWMVTGGSTDG 321000000000000100000000100000000000000122322 KQGCATIWEGSGCVGRSTTMCCPANTCCNINTGFYIRSYRRVE 1000000000010000000000000000000010000000000 >Protein CGI-38; SWP:Q9CRB6; PDB:1WLMA GSSGSSGMAASTDIAGLEESFRKFAIHGDPKASGQEMNGKNWAKL 999999986432100000000000000100000000000000000 CKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEELA 000000000000000000000000000000000000000000000 TKRFKGKSKEEAFDAICQLIAGKEPANIGVTKAKTGGAVDRLTDT 000000000000000000000000012246899999999999999 SKYTGSHKERSGPSSG 9999999999999999 >Afadin; SWP:Q9QZQ1; PDB:1WLNA GSSGSSGPEKLPYLVELSPDGSDSRDKPKLYRLQLSVTEVGTEKF 986532110000000000000001100000000000000000000 DDNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVDGQRIS 110000000000000000000000000000001000000000000 ETTMLQSGMRLQFGTSHVFKFVDPSGPSSG 000000000000000000000000001347 >sufE protein; SWP:Q72KV6; PDB:1WLOA MVPPKLKQALELFKSLPKELRSQVLLEYAAKVPPPPPGVELERVH 100000000000000000000000000000000000000000000 ECQTPFFVHADVEGGKVRLYFHVPDEAPTVKAFAGLLREGLEGES 000000000000010000000000000000000000000000000 PEAVLEVPPGFYRGYGLEEFFTPLRLRGLEAALLRLQAQVRKALT 000000000000000000000000000000000000000000001 S 1 >Alpha-actinin 4; SWP:O43707; PDB:1WLXA GSTEKQLEAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIE 321110000000000000000000000000000000000111100 EIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAESNHIKLS 000000000000000000000000000000000000000111122 GSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQSKQQ 221100100000000000000000000000000000111 >Neurotoxin BmP01; SWP:Q9U8D2; PDB:1WM7A ATCEDCPEHCATQNARAKCDNDKCVCEPK 21000000000000000011111000000 >Thioredoxin H-type; SWP:Q42443; PDB:1WMJA GPMAAEEGMAAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTA --------1110000000000000000000000000000000000 SWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAM 111100000000000000000000000000000000000000000 PTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAASASA 0000000000000000000000000000000000011245 >IsTX; SWP:P0C194; PDB:1WMTA VHTNIPCRGTSDCYEPCEKKYNCARAKCMNRHCNCYNNCPW 00000000000000000000000000000000000001112 >WW domain containing oxid; SWP:Q9NZC7; PDB:1WMVA GSAKRKRVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRLAF 999999975310000000000000000000000000000001122 TVDDNPTKP 357899999 >VoNTR protein; SWP:Q5USN7; PDB:1WN4A ALETQKPNHLLEEALVAFAKKGNLGGLP 9976431000000000000001357899 >Kalata B3/B6; SWP:P58455; PDB:1WN8A GVKSSETTLTMFLKEMQLKGLP 3221100000000000000123 >CREB Binding Protein; SWP:Q92793; PDB:1WO3A AVSACALPKCAAAANVAAHMTHCAK 0000000000000000000000001 >CREB Binding Protein; SWP:Q92793; PDB:1WO5A RVIACFLKVCAAAANVAAHMTHCAK 0000000000000000000000001 >CREB Binding Protein; SWP:Q92793; PDB:1WO7A FVSTCYLPKCAAAANVAAHITHCYK 0000000000000000000000001 >trypsin inhibitor; SWP:Q8WQ22; PDB:1WO9A AGECTPGQTKKQDCNTCTCTPTGIWGCTRKACRTT 00000000000000000000000000000000000 >PUTATIVE MINIMAL NUCLEOTI; SWP:NA; PDB:1WOTA GSHMDLETLRARREAVLSLCARHGAVRVRVFGSVARGEAREDSDL 211000000000000000000000000000000000000111100 DLLVAFEEGRTLLDHARLKLALEGLLGVRVDIVSERGLAPRLREQ 000000011000000000000000000000000000000000000 VLREAIPL 00000000 >MTx-HsTx1; SWP:P59867; PDB:1WPDA VSCTGSKDCYAPCRKQTGCPYGKCMNRKCKCNRC 4223211000000000000111111211111111 >Hypothetical 15.6 kDa pro; SWP:P36141; PDB:1WPIA MSFWKTLQRQPRTISLFTNDIASNIKSQKCLQLLKGDVSHRFDVE 432211111100000000000000000000000000111110000 IANRFPTWDQLQYMRTSCPQGPVSLQRQIPKLDSVLKYKHTDPTF 000000000000000010100000000001000000000000000 GMDLQKCVQRGLWNPKEALWVDWENKLVGNEPADIDKYIIQRK 0000000000000010000000000000000000000000012 >Aptotoxin VII; SWP:P49271; PDB:1WQBA WLGCARVKEACGPWEWPCCSGLKCDGSECHPQ 64210010000112111000000000000001 >OmTx1; SWP:NA; PDB:1WQCA DPCYEVCLQQHGNVKECEEACKHPVE 00000000000000000000001246 >OmTx3; SWP:NA; PDB:1WQEA NDPCEEVCIQHTGDVKACEEACQ 00000000000000000000001 >Toxin APETx1; SWP:P61541; PDB:1WQKA GTTCYCGKTIGIYWFGTKTCPSNRGYTGSCGYFLGICCYPVD 100000000000000000000000000000000000000001 >Proto-oncogene tyrosine-p; SWP:P07332; PDB:1WQUA GSSGSSGEVQKPLHEQLWYHGAIPRAEVAELLVHSGDFLVRESQG 654321100000000000000000000000000000000000011 KQEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLS 100000000000000000000100000000000000000000000 TQQPLTKKSGVVLHRAVPSGPSSG 000000000000000000013468 >ubiquitin-protein ligase; SWP:Q8CFI0; PDB:1WR3A GSPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSL 753100000000001100000000000000000013 >ubiquitin-protein ligase; SWP:Q8CFI0; PDB:1WR4A GSPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIM 753100100000001100000000000000000012 >Nedd4-2; SWP:Q8CFI0; PDB:1WR7A GSPGIQSFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRLK 99976421001000000000000000000000000000011 >myeloid cell leukemia seq; SWP:P97287; PDB:1WSXA GPLGSEDDLYRQSLEIISRYLREQATGSKDSKPLGEAGAAGRRAL 986432000000000000000000000112211111100000000 ETLRRVGDGVQRNHETAFQGMLRKLDIKNEGDVKSFSRVMVHVFK 000000000000000000000000000000000000000000000 DGVTNWGRIVTLISFGAFVAKHLKSVNQESFIEPLAETITDVLVR 100000000000000000000000000000000000000000000 TKRDWLVKQRGWDGFVEFFHVQDLEGG 000000000000000000001233457 >BuTX-MTX; SWP:NA; PDB:1WT7A WCSTCLDLACTGSKDCYAPCRKQTGCPNAKCINKSCKCYGC 32332211000000000000000000000000110000001 >Pcdha4 protein; SWP:O88689; PDB:1WUZA GNSQIHYSIPEEAKHGTFVGRIAQDLGLELTELVPRLFRVASKDR 210000000000000000000000000000000000000000000 GDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQV 000000000000000000000000011000000000000000000 FHVEVEVRDINDN 0000000000112 >At2g23090/F21P24.15; SWP:NA; PDB:1WVKA GHHHHHHLEGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMS 999999999999999999999999999999976677754222210 IQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK 00000000000001100000000000011111100000122 >Sialic acid synthase; SWP:Q9NR45; PDB:1WVOA GSSGSSGSVVAKVKIPEGTILTMDMLTVKVGEPKGYPPEDIFNLV 976431000000000000000000000000000000000000000 GKKVLVTVEEDDTIMEELVDNHGKKIKSSGPSSG 0000000000000000000012457999999999 >Excitatory insect selecti; SWP:O61668; PDB:1WWNA KKNGYAVDSSGKVSECLLNNYCNNICTKVYYATSGYCCLLSCYCF 210000012111011000000000000000000000000000000 GLDDDKAVLKIKDATKSYCDVQII 011111000000000000000001 >Threonyl-tRNA synthetase,; SWP:P26639; PDB:1WWTA GSSGSSGDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADN 876543100000000000000000000000000000000010011 TVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYSGPSSG 0000000000000000000000000000123333223457899 >Hypothetical protein FLJ2; SWP:Q9H6S3; PDB:1WWUA GSSGSSGFRVERSQPASQPLTYESGPDEVRAWLEAKAFSPRIVEN 999999999998754210000000000000000000000000000 LGILTGPQLFSLNKEELKKVCGEEGVRVYSQLTMQKAFLEKQQSG 000000000000000000000000000000000000000011246 SELSGPSSG 789999999 >Connector enhancer of kin; SWP:Q969H4; PDB:1WWVA GSSGSSGMEPVETWTPGKVATWLRGLDDSLQDYPFEDWQLPGKNL 987543200000000000000000000000000000000000000 LQLCPQSLEALAVRSLGHQELILGGVEQLQALSSRLQTENSGPSS 000000000000000000000000000000000124679999999 G 9 >E74-like factor 5 ESE-2b; SWP:Q58DT0; PDB:1WWXA GSSGSSGSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSE 876655421000000000000000000000000000000000000 ALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVDRRLVYKFG 000000000001000000000000000000000000000000000 KNAHGWQEDKLSGPSSG 00000001246899999 >Thioredoxin-like protein; SWP:O43396; PDB:1WWYA GSSGSSGGYMDLMPFINKAGCECLNESDEHGFDNCLRKDTTFLES 999864200000000000000000000000000000000000000 DCDEQLLITVAFNQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSM 000000000000000000000000000000000000000000000 DFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTIFVQ 000000000000000000000000000000000000000000000 SNQGEEETTRISYFTFIGTPVQATNMNDFKSGPSSG 000000000000000000000001234456789999 >Cytoplasmic protein NCK2; SWP:O43639; PDB:1WX6A GSSGSSGLSNGQGSRVLHVVQTLYPFSSVTEEELNFEKGETMEVI 999988765532100000000000000000000000000000000 EKPENDPEWWKCKNARGQVGLVPKNYVVVLSDGPALHPAHSGPSS 000000000000000000000000000000000014579999999 G 9 >Ubiquilin 3; SWP:Q9H347; PDB:1WX7A GSSGSSGSPAPVQDPHLIKVTVKTPKDKEDFSVTDTCTIQQLKEE 999999975431000000000000000000000000000000000 ISQRFKAHPDQLVLIFAGKILKDPDSLAQCGVRDGLTVHLVIKRQ 000000000000000000000000000000000000000000000 HRAMGNECPASGPSSG 1234567999999999 >RIKEN cDNA 4931431F19; SWP:Q9D4I8; PDB:1WX8A GSSGSSGVSGREPSSRIIRVSVKTPQDCHEFFLAENSNVRRFKKQ 999999998654310000000000000000000000000000000 ISKYLHCNADRLVLIFTGKILRDQDILSQRGILDGSTVHVVVRSH 000000000000000000000000000000000000000000012 SGPSSG 467999 >HLA-B associated transcri; SWP:Q5STX1; PDB:1WX9A GSSGSSGLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPS 443321000000000000000000000000000000000000000 EKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPSGPSSG 00000000000000000000000000000000013579999 >Afadin; SWP:Q9QZQ1; PDB:1WXAA GSSGSSGSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVAESLE 977643220000000000000000000000000000000000000 KYGLEKENPKDYCIARVMLPPGAQHSDERGAKEIILDDDECPLQI 000000000000000000001113332111000000000000000 FREWPSDKGILVFQLKRRPPSGPSSG 00000000000000000012445679 >Epidermal growth factor r; SWP:Q9H6S3; PDB:1WXBA GSSGSSGKYVKILYDFTARNANELSVLKDEVLEVLEDGRQWWKLR 876432000000000000000000000000000000000000000 SRSGQAGYVPCNILGEASGPSSG 00000000000000000135568 >Single-strand recognition; SWP:NA; PDB:1WXLA SHMPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKEL 643211000000000000000000000000000000000000000 KDKSKWEDAAAKDKQRYHDEMRNYKPEA 0000000000000000000011224689 >A-Raf proto-oncogene seri; SWP:NA; PDB:1WXMA GSSGSSGGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQ 999853100000000000000000000000000000000000000 DCCVVYRLIKGRKTVTAWDTAIAPLDGEELIVEVLSGPSSG 00000000010000000000000000000000000224679 >Toxin APETx2; SWP:NA; PDB:1WXNA GTACSCGNSKGIYWFYRPSCPTDRGYTGSCRYFLGTCCTPAD 000000000000000001100111000000000000000001 >THO complex subunit 1; SWP:NA; PDB:1WXPA GSSGSSGPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSE 999987554310000000000000000000000000000000000 IRQIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLS 000000000000000000000000000000000000000000000 DLAESLTNDNETNSSGPSSG 00000001235789999999 >Hypothetical protein FLJ2; SWP:NA; PDB:1WXTA GSSGSSGLKMQVLYEFEARNPRELTVVQGEKLEVLDHSKRWWLVK 866532000000000000000000000000000000000000000 NEAGRSGYIPSNILEPLSGPSSG 00000000000000000235689 >peroxisomal biogenesis fa; SWP:NA; PDB:1WXUA GSSGSSGTNWASGEDDHVVARAEYDFVAVSDEEISFRAGDMLNLA 976432100000000000000000000000000000000000000 LKEQQPKVRGWLLASLDGQTTGLIPANYVKILGKRRGRKTIESGP 000000001000000000000000000000000000001112456 SSG 778 >BAG-family molecular chap; SWP:NA; PDB:1WXVA GSSGSSGLTVTVTHSNEKHDLHVTSQQGSSEPVVQDLAQVVEEVI 765321000000000000000000000000000000000000000 GVPQSFQKLIFKGKSLKEMETPLSALGIQDGCRVMLIGKKNSGPS 000000000000000000000000000000000000000013456 SG 89 >Np95-like ring finger pro; SWP:NA; PDB:1WY8A GSSGSSGMWIQVRTIDGSKTCTIEDVSRKATIEELRERVWALFDV 876421000000000000000000000000000000000000000 RPECQRLFYRGKQLENGYTLFDYDVGLNDIIQLLVRPDSGPSSG 00000000000000000000000000000000000001234578 >Skeletal muscle LIM-prote; SWP:NA; PDB:1WYHA GSSGSSGCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGS 544310000000000001000000000000000000000000000 RSFVPDKGAHYCVPCYENKFASGPSSG 000000000000000000000235689 >protocadherin beta 14; SWP:NA; PDB:1WYJA GSSGSSGAGSATITYSVLEETDRGSLVGNLAKDLGLSLRELITRG 998754322100000000110000000000000000000000000 AQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHFQV 000001221000000000000000000001111121110000000 LLKSPVQFIQGEIQLQDVNDHAPEFMEDESGPSSG 00000000000000001235689999999999999 >Transgelin-2; SWP:NA; PDB:1WYMA GSSGSSGQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQ 999999998642100000000000000000000000000000000 NWLKDGTVLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQ 000000000000000000000000000000000000000000000 AAERYGINTTDIFQTVDLWEGKNMACVQRTLMNLGGLAVARDDGL 000000000000000000000000000000000000000000000 FSGDPNWFPKKSKESGPSSG 00000000001246899999 >Calponin-2; SWP:NA; PDB:1WYNA GSSGSSGNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDG 999999998642100000000000000000000000000000000 TILCTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNP 000000000000000000000000000000000000000000000 VDLFEANDLFESGNMTQVQVSLLALAGKAKTKGLQSGVDIGVKYS 000000000000000000000000000000011235799999999 EKQERSGPSSG 99999999999 >Microtubule-associated pr; SWP:NA; PDB:1WYOA GSSGSSGMAVNVYSTSVTSENLSRHDMLAWVNDSLHLNYTKIEQL 987642100000112344321000000000000000000000000 CSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFK 000000000000000000000000000000000000000000000 KMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDGKDYNPLL 000000000000000000000000000000000000000000000 ARQGQDVAPPPNPGDQIFSGPSSG 011124445567899999999999 >Calponin 1; SWP:NA; PDB:1WYPA GSSGSSGNKLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDG 999999997542100000000000000000000000000000000 IILCEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKP 000000000000000000000000000000000000000000000 HDIFEANDLFENTNHTQVQSTLLALASMAKTKGNKVNVGVSGPSS 000000000000000000000000000000000000000012468 G 9 >Spectrin beta chain, brai; SWP:NA; PDB:1WYQA GSSGSSGAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIV 999865320000000000000000000000000000000000000 HKHRPDLLDFESLKKCNAHYNLQNAFNLAEKELGLTKLLDPEDVN 000000000000001000000000000000000000000000000 VDQPDEKSIITYVATYYHYFSKMKALAVEGKSGPSSG 0000000000000000000000012468999999999 >Rho guanine nucleotide ex; SWP:NA; PDB:1WYRA GSSGSSGEEQIVTWLISLGVLESPKKTICDPEEFLKSSLKNGVVL 754211000000000000000000100000000000000000000 CKLINRLMPGSVEKFCLDPQTEADCINNINDFLKGCATLQVEIFD 000000000000000000000000000000000000000000000 PDDLYSGVNFSKVLSTLLAVNKATESGPSSG 0000000000000000000000000246799 >RIKEN cDNA 2310008M20 pro; SWP:NA; PDB:1WYSA GSSGSSGMAELDIGQHCQVQHCRQRDFLPFVCDGCSGIFCLEHRS 999999998753210000000010100000000000000000000 KDSHGCSEVNVVKERPKTDEHKSYSGPSSG 000000000112346799999999999999 >Major surface antigen; SWP:NA; PDB:1WZ4A NSTTFHQALLDPRVRGLYFPAGG 00000000000010011111224 >HMG-BOX transcription fac; SWP:NA; PDB:1WZ6A GSSGSSGARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADW 987654432100000000000000000000000100000000000 WAVLDPKEKQKYTDMAKEYKDAFMKANPGYRSGPSSG 0000000000000000000000001223333467899 >Pleckstrin; SWP:NA; PDB:1X05A GSSGSSGVILKEEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDP 999764322100001000000000000123221000000000000 AYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEI 000000000000000000000000000001223332210000000 ITADEVHYFLQAATPKERTEWIKAIQMASRTGKSGPSSG 000000000000000000000000000000023468999 >Ras GTPase-activating-lik; SWP:NA; PDB:1X0HA GSSGSSGISLKYTAARLHEKGVLLEIEDLQVNQFKNVIFEISPTE 999875310000000000000000000000000000000000000 EVGDFEVKAKFMGVQMETFMLHYQDLLQLQYEGVAVMKLFDRAKV 000000000113333210000000000000000000000000000 NVNLLIFLLNKKFYGKSGPSSG 0000000000000011357899 >Signal-transducing adapto; SWP:NA; PDB:1X1FA GSSGSSGQERLKITALPLYFEGFLLIKRSGYREYEHYWTELRGTT 999999999986531000000000000011110000000000000 LFFYTDKKSIIYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEE 000001000000000000000000000123321000000000000 VQLKTENTESGEEWRGFILTVTELSVPQNVSLLPGQVIKLHEVLE 000000000000000000000000000000000000000000000 REKKRRIESGPSSG 00000001135689 >Pleckstrin 2; SWP:NA; PDB:1X1GA GSSGSSGSLSTVELSGTVVKQGYLAKQGHKRKNWKVRRFVLRKDP 999998642100000000000000000122221000000000000 AFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGN 000000000000100000000000000001222112212211111 LFKVITKDDTHYYIQASSKAERAEWIEAIKKLTSGPSSG 000000000000000000000000000000000134446 >Ubiquitin-like protein SB; SWP:NA; PDB:1X1MA GSSGSSGMSLSDWHLAVKLADQPLAPKSILQLPETELGEYSLGGY 999987654210000000000000000000000011111110000 SISFLKQLIAGKLQESVPDPELIDLIYCGRKLKDDQTLDFYGIQP 000000000000000000000000000000000000000000000 GSTVHVLRKSWSGPSSG 00000000012357899 >moricin; SWP:NA; PDB:1X22A GKIPVKAIKKAGAAIGKGLRAINIASTAHDVYSFFKPKHKKK 653221111000011111111111110011011122333579 >Homeobox protein Cux-2; SWP:NA; PDB:1X2LA GSSGSSGAGPGAEEEQLDTAEIAFQVKEQLLKHNIGQRVFGHYVL 999999976532100000000000000000000000000000000 GLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNVLALR 000000000000000000000000000000000000000000000 TIQVRSGPSSG 00000024579 >LAG1 longevity assurance; SWP:NA; PDB:1X2MA GSSGSSGTAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSI 666544200000000000000000000000000000000000000 QRWFRQRRNQEKPSGPSSG 0000000000123578999 >Homeobox protein PKNOX1; SWP:NA; PDB:1X2NA GSSGSSGKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAA 877555444321000000000000000000000000000000000 QTNLTLLQVNNWFINARRRILQSGPSSG 0000000000000000000000235679 >Protein arginine N-methyl; SWP:NA; PDB:1X2PA GSSGSSGEEFVAIADYAATDETQLSFLRGEKILILRQTTADWWWG 986421000000000000000000000000000000000000000 ERAGCCGYIPANHVGKHSGPSSG 00000000000000013457789 >Signal transducing adapte; SWP:NA; PDB:1X2QA GSSGSSGSEIQLNNKVARKVRALYDFEAVEDNELTFKHGEIIIVL 999999999875421000000000000000000000000000000 DDSDANWWKGENHRGIGLFPSNFVTTNLNIETEAAAVSGPSSG 0000000000000000000000000000134679999999999 >ATP-dependent protease La; SWP:NA; PDB:1X37A MAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRDQAILDIIRY -21100000000000000000000000000000000000000000 YTREAGVRSLERQLAAICRKAAKAIVAEERKRITVTEKNLQDFIG 001110000000000000000000011221000000000000001 KRIFRYGQAETEDQVGVVTGLAYTTVLRHHHHHH 111011---------------------------- >Synapse associated protei; SWP:NA; PDB:1X3AA GSSGSSGTNDEETIQQQILALSADKRNFLRDPPAGVQFNFDFDQM 987654321000000000000000000000000011101000000 YPVALVMLQEDELLSKMRFALVPKLVKEEVFWRNYFYRVSLIKQS 000000000000000000000000000000000000000000000 AQLTSGPSSG 1235799999 >Transforming growth facto; SWP:NA; PDB:1X3BA GSSGSSGMGTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTV 999864210000000000000000000000000000000000000 FAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGGIG 000000000000000000000000000000000000000000111 ALVRLKSLQGDKLEVSLKNNVVSVNKEPVAEPDIMATNGVVHVIT 000000000000000000000000000000000000000000000 NVLQPSGPSSG 00000124567 >Zinc finger protein 292; SWP:NA; PDB:1X3CA GSSGSSGRKKPVSQSLEFPTRYSPYRPYRCVHQGCFAAFTIQQNL 999999999999999876543211000000001110000000000 ILHYQAVHKSDLPAFSAEVEEESGPSSG 0000000000001234466889999999 >Fibronectin type-III doma; SWP:NA; PDB:1X3DA GSSGSSGAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPSDNG 999999998764321100000000000000000000000000000 SKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRL 000000000000000000000000000000000000000000000 SARNDYGTSGFSEEVLYYTSGCSGPSSG 0000000000000000000011345799 >Leupaxin; SWP:NA; PDB:1X3HA GSSGSSGKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCG 998766544443210000000000000000000000000000000 DCFTSFSTGSFFELDGRPFCELHYHHRRGSGPSSG 00000011100000000000000000001236799 >cpSRP43; SWP:NA; PDB:1X3PA AVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLL 321110000000001000000001122110000000000000000 YQQQQPMNE 000000123 >cpSRP43; SWP:NA; PDB:1X3QA GSQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 532111111111000011222100001111112111110000000 DVAKDYEDGLEY 000000000011 >Transcriptional regulator; SWP:NA; PDB:1X3UA GSHMDDANDIRARLQTLSERERQVLSAVVAGLPNKSIAYDLDISP 542110000000000000000000000000000000000000000 RTVEVHRANVMAKMKAKSLPHLVRMALAGGFGPS 0000000000000000000000000000000112 >ARAP2; SWP:NA; PDB:1X40A GSSGSSGMSSVSEVNVDIKDFLMSINLEQYLLHFHESGFTTVKDC 999999999753100000000000000000000000000000000 AAINDSLLQKIGISPTGHRRRILKQLQIILSKMQDIPIYASGPSS 000000000000000000000000000000000234799999999 G 9 >Transcriptional adaptor 2; SWP:NA; PDB:1X41A GSSGSSGDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEE 976542100000000000000000000000000000000000000 CEKHYMKYFSGPSSG 000000000012578 >SH3 domain GRB2-like prot; SWP:NA; PDB:1X43A GSSGSSGLNDLKESSNNRKARVLYDYDAANSTELSLLADEVITVF 999999987654322000000000000000000000000000000 SVVGMDSDWLMGERGNQKGKVPITYLELLNSGPSSG 000000000000001000000000000001245799 >Myosin-binding protein C,; SWP:NA; PDB:1X44A GSSGSSGIMVTKQLEDTTAYCGERVELECEVSEDDANVKWFKNGE 976431000000000000000000000000000000000000000 EIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTGGQSSA 000000000000000000000000000000000000000000000 KLSVDLKSGPSSG 0000000135689 >amyloid beta (A4) precurs; SWP:NA; PDB:1X45A GSSGSSGDVFIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGP 965310000000000000000000000210000000000000000 AEKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKGLKNQSRVKLN 000000000000000000000000000000000000000000000 IVSGPSSG 00001135 >DGCR8 protein; SWP:NA; PDB:1X47A GSSGSSGEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPS 999998765543321000000000000000000000000000000 EPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPDFVKQT 000000000000000000000000000000000000000001134 SESGPSSG 55678899 >Interferon-induced, doubl; SWP:NA; PDB:1X48A GSSGSSGYIGLVNSFAQKKKLSVNYEQCEPNSELPQRFICKCKIG 866432000000000000000000000112232211000000000 QTMYGTGSGVTKQEAKQLAAKEAYQKLLKSPPKTAGTSGPSSG 0000000000000000000000000000000123679999999 >Interferon-induced, doubl; SWP:NA; PDB:1X49A GSSGSSGMASDTPGFYMDKLNKYRQMHGVAITYKELSTSGPPHDR 999999864211100000000000000000000000000000000 RFTFQVLIDEKEFPEAKGRSKQEARNAAAKLAVDILDNENKVDCH 000000000000000000000000000000000000000346899 TSGPSSG 9999999 >splicing factor, arginine; SWP:NA; PDB:1X4AA GSSGSSGMSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYK 999999999999999977542100000000000000000000000 YGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYR 000000000001110000000000000000000000000000000 LRVEFPRSGRGTGSGPSSG 0000001345678999999 >Heterogeneous nuclear rib; SWP:NA; PDB:1X4BA GSSGSSGMEKTLETVPLERKKREKEQFRKLFIGGLSFETTEESLR 999999999999999987542110000000000000000000000 NYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARP 000000000000000000100100000000000000000000000 HSIDGRVVEPKRAVAREESGSGPSSG 00000000000100135799999999 >Splicing factor, arginine; SWP:NA; PDB:1X4CA GSSGSSGGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA 999999999985421000000000000000000000000000000 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVD 000000000000000000000000000000000000000000000 GPRSPSYGRSRSSGPSSG 134678999999999999 >Matrin 3; SWP:NA; PDB:1X4DA GSSGSSGQKGRVETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISN 998655432211000000000000001000000000000000000 HLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQ 000000000000000000000000000000000000000000001 KYKRIKSGPSSG 112211345678 >RNA binding motif, single; SWP:NA; PDB:1X4EA GSSGSSGLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNK 642100000000000000000000000000000000000000000 CKGYGFVDFDSPSAAQKAVTALKASGVQAQMAKQSGPSSG 0000000000000000000000000000000013456789 >Matrin 3; SWP:NA; PDB:1X4FA GSSGSSGKKPEGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLK 999999999999999765432211000000000000000000000 LAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVDHCLKKALWFQ 000000000000000000000000000000000000000000000 GRCVKVDLSEKYKKLVSGPSSG 0000000001110001346799 >Nucleolysin TIAR; SWP:NA; PDB:1X4GA GSSGSSGNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQT 999986543100000000000000000000000000000000000 FSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHV 000000000000000000000000000000000000000000000 VKCYWGKESPDMTSGPSSG 0000001235568999999 >RNA-binding protein 28; SWP:NA; PDB:1X4HA GSSGSSGLPSDVTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYV 999999997542100000000000000000000000000000000 RVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDG 000001111000000000000000000000000000121000000 RQLKVDLAVTRDEAASGPSSG 000000000123568999999 >Inhibitor of growth prote; SWP:NA; PDB:1X4IA GSSGSSGYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKG 865311000000000000000000000000000000000000000 KWYCPQCTAAMKRRGSRHKSGPSSG 0000000000000012468999999 >RING finger protein 38; SWP:NA; PDB:1X4JA GSSGSSGQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCN 986432100000000011121100000000000010000000000 HEFHAKCVDKWLKANRTCPICRADSGPSSG 000000000000000000000000012345 >Skeletal muscle LIM-prote; SWP:NA; PDB:1X4KA GSSGSSGCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGT 764311000000000000000000000000000000000000000 KSFIPKDNQNFCVPCYEKQHASGPSSG 000000000000000000001134467 >Skeletal muscle LIM-prote; SWP:NA; PDB:1X4LA GSSGSSGCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSL 975431000000000133210000000000000000000000000 VGRGFLTERDDILCPDCGKDISGPSSG 000000000000000000001246789 >Far upstream element bind; SWP:NA; PDB:1X4MA GSSGSSGHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAG 999999765432100000000000000000000000000000000 VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGSG 000000013344321000000000000000000000000012467 PSSG 9999 >Far upstream element bind; SWP:NA; PDB:1X4NA GSSGSSGHQQQRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESG 999876544321000000000000000000010000000000000 CKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRSGPS 000000000010000000000000000000000000000002478 SG 99 >Splicing factor 4; SWP:NA; PDB:1X4OA GSSGSSGKVSPPEDEEAKNLAEKLARFIADGGPEVETIALQNNRE 655432210000000000000000000000000000000000000 NQAFSFLYDPNSQGYRYYRQKLDEFRKSGPSSG 000000000000000000000000001358999 >Putative splicing factor,; SWP:NA; PDB:1X4PA GSSGSSGVGTIDQLVKRVIEGSLSPKERTLLKEDPAYWFLSDENS 876542100000000000000000000000000000000000000 LEYKYYKLKLAEMQRSGPSSG 000000000000000012356 >U4/U6 small nuclear ribon; SWP:NA; PDB:1X4QA GSSGSSGMALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCV 999975320000000000000000000000000000000000000 GKGMDKKKAADHLKPFLDDSTLRFVDKLFEAVEEGRSSRHSSGPS 000000000000000000000000000000000000123579999 SG 99 >Parp14 protein; SWP:NA; PDB:1X4RA GSSGSSGKSIRLAKEKESQADYISTYVEWQYIDKNITQCFDKMTN 999999999975322111000000000000000000000000000 MKLEVAWKAKKKDTVVQIHNQDFTVDLSTNTATAPQGQTFTVQRL 000000000000000000000000000000000000000000000 VKASGPSSG 001235679 >Zinc finger HIT domain co; SWP:NA; PDB:1X4SA GSSGSSGMEPAGPCGFCPAGEVQPARYTCPRCNAPYCSLRCYRTH 999988642100000000000000000000000000000000000 GTCAENFYSGPSSG 00000112345678 >hypothetical protein LOC5; SWP:NA; PDB:1X4TA GSSGSSGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQ 876655432100000000000000000000000000000000000 NAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVSGPS 000000000000000000000000000000000000000012366 SG 89 >Zinc finger, FYVE domain; SWP:NA; PDB:1X4UA GSSGSSGRYPTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCC 999998766554310000000000111100000000000000000 SFKVPKSSMGATAPEAQRETVFVCASCNQTLSKSGPSSG 000000011111111110000000000000001234679 >Hypothetical protein LOC1; SWP:NA; PDB:1X4VA GSSGSSGRKIFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPL 999998643210000000000000000000000000000000000 DHDCSGEGHPTSSGPSSG 000000134678999999 >Hypothetical protein FLJ1; SWP:NA; PDB:1X4WA GSSGSSGSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLH 999875432100000000000000000000000000000000000 RLPEQHDCTFDHMGRGSGPSSG 0000000000012346788889 >Fibronectin type-III doma; SWP:NA; PDB:1X4XA GSSGSSGPDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEW 865421000000000000000000000000000110000000000 GGVEGSMQICYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFS 000000000000000000000000000000000000000000000 EVVACVTPPSSGPSSG 0000000000124568 >biregional cell adhesion; SWP:NA; PDB:1X4YA GSSGSSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFY 864321000000000000000000000000000000000000000 IYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKMQCFN 000000000000000000000000000000000000000000000 EGGESEFSNVMICETKARSGPSSG 000000000000000000124689 >biregional cell adhesion; SWP:NA; PDB:1X4ZA GSSGSSGSQPDHGRLSPPEAPDRPTISTASETSVYVTWIPRGNGG 999999998752000000000000000000000000000000000 FPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYK 000000000000000000000000000000000000000000000 FRVRALNMLGESEPSAPSRPYVVSGSGPSSG 0000000000000000000000001123468 >Galectin-4; SWP:NA; PDB:1X50A GSSGSSGHQQLNSLPTMEGPPTFNPPVPYFGRLQGGLTARRTIII 999999997532211000000000000000000000000000000 KGYVPPTGKSFAINFKVGSSGDIALHINPRMGNGTVVRNSLLNGS 000000000000000000000000000000010000000000000 WGSEEKKITHNPFGPGQFFDLSIRCGLDRFKVYANGQHLFDFAHR 000000000000000000000000000000000000000000000 LSAFQRVDTLEIQGDVTLSYVQISGPSSG 00000000000000000000000001246 >A/G-specific adenine DNA; SWP:NA; PDB:1X51A GSSGSSGPRKASRKPPREESSATCVLEQPGALGAQILLVQRPNSG 999976422332110000000000000000000000000001122 LLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGE 110000000000000000000000000000000000000000000 VVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAV 000001000000000000001100000001000000000000000 STAMKKVFRVYQGQSGPSSG 00000000000011467899 >Pelota homolog; SWP:NA; PDB:1X52A GSSGSSGTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQ 999987765543210000000000000000000000000000000 VEKANEAMAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTV 000000000000000000000000000000000000000000000 RIFSSLHVSGEQLSQLTGVAAILRFPVPSGPSSG 0000000000000000000000000000112345 >Activator of 90 kDa heat; SWP:NA; PDB:1X53A GSSGSSGIPTCKITLKETFLTSPEELYRVFTTQELVQAFTHAPAT 433221000000000000000000000000000000000000000 LEADRGGKFHMVDGNVSGEFTDLVPEKHIVMKWRFKSWPEGHFAT 000000000000000000000000000000000000000000000 ITLTFIDKNGETELCMEGRGIPAPEEERTRQGWQRYYFEGIKQTF 000000000000000000000000000000000000000000000 GYGASGPSSG 0000124568 >Endothelial differentiati; SWP:NA; PDB:1X57A GSSGSSGDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIAD 877765543210000000000000000000000000000000000 YESGRAIPNNQVLGKIERAIGLKLRGKDIGKPIEKGPRAKSGPSS 000000000000000000000000000000000113679999999 G 9 >Hypothetical protein 4930; SWP:NA; PDB:1X58A GSSGSSGRKDFTKEEVNYLFHGVKTMGNHWNSILWSFPFQKGRRA 876665432100000000000000000000000000000000000 VDLAHKYHRLISGPSSG 00000000000136678 >Histidyl-tRNA synthetase; SWP:NA; PDB:1X59A GSSGSSGMAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKL 987532100000000000000000000000000000000000000 LKLKAQLGPDESKQKFVLKTPKSGPSSG 0000000134689999999999999999 >Ephrin type-A receptor 1; SWP:NA; PDB:1X5AA GSSGSSGAESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYE 999987653311100000000000000000012233332210000 LHVLNQDEEWHQMVLEPRVLLTKLQPDTTYIVRVRTLTPLGPGPF 000000000000000000000000000000000000000000000 SPDHEFRTSPPSGPSSG 00000000000124689 >signal transducing adapto; SWP:NA; PDB:1X5BA GSSGSSGMPLFTANPFEQDVEKATNEYNTTEDWSLIMDICDKVGS 999999764221000000000000000000000000000000000 TPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLE 000000000000000000000000000000000000000000000 VCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWSEEFQKDPQFSL 000000000000000000000000000000000000000000000 ISATIKSMKEEGITFPPAGSQTSGPSSG 0000000000000000012345789999 >Protein disulfide-isomera; SWP:NA; PDB:1X5CA GSSGSSGPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAP 765321000000000000000000000000000000000000000 IWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASA 000000000000000000000000000000000000000000000 DRTVIDYNGERTLDGFKKFLESGGQSGPSSG 1000000000000000000000000123579 >Protein disulfide-isomera; SWP:NA; PDB:1X5DA GSSGSSGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEP 643321100000000000000000000000000000000000000 EWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIF 000000000000000000000000000000000000000000000 QKGESPVDYDGGRTRSDIVSRALDLFSDNAPPPELLESGPSSG 0000000000000000000000000000001223579999999 >Thioredoxin domain contai; SWP:NA; PDB:1X5EA GSSGSSGNVRVITDENWRELLEGDWMIEFYAPWCPACQNLQPEWE 544322000000000000000000000000000000000000000 SFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYHCKDGEFR 000000000000000000000000000000000000000000000 RYQGPRTKKDFINFISDKEWKSIEPVSSWFSGPSSG 000000000000000000000000001111123568 >Neogenin; SWP:NA; PDB:1X5FA GSSGSSGEHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDP 999999998654310000000000000000000000000000000 HGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIF 000000000000001000000000000000000000000000000 RVMAQNKHGSGESSAPLRVETQPESGPSSG 000000000000000000000000124579 >Neogenin; SWP:NA; PDB:1X5GA GSSGSSGRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGN 999998776554321000000000000000000000000000001 GEIQNYKLYYMEKGTDKEQDVDVSSHSYTINGLKKYTEYSFRVVA 100000000000000000000000000000000000000000000 YNKHGPGVSTPDVAVRTLSDSGPSSG 00000000000000000000135689 >Neogenin; SWP:NA; PDB:1X5HA GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPA 999999999975321000000000000000000000000000000 TQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEGLDRGTEY 000000000000000000000000000000000000000000000 NFRVAALTINGTGPATDWLSAETFESDLDETRVPEVSGPSSG 000000000000000000000000000112234567899999 >Neogenin; SWP:NA; PDB:1X5IA GSSGSSGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVTSIVV 999999999999997653221000000000000000000000000 SWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDP 000000000000000000000000000000000000000000000 SSHYVITLKAFNNVGEGIPLYESAVTRPHTSGPSSG 000000000000000000000000000002345678 >Neogenin; SWP:NA; PDB:1X5JA GSSGSSGPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRY 655543210000000000000000000000000011110011000 YTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKG 000000000011000000000000000000000000000000001 RRSSTWSMTAHGTTFELSGPSSG 00000000000000000135689 >Neogenin; SWP:NA; PDB:1X5KA GSSGSSGTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPS 999999987643210000000000000000100000000000000 EANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDT 000000000000000000000000000000000000000000000 PYYFKIQARNSKGMGPMSEAVQFRTPKASGPSSG 0000000000000000000000000000123456 >Ephrin type-A receptor 8; SWP:P29322; PDB:1X5LA GSSGSSGQAAPSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYE 999743100000000000000000000000000000000000000 IKYYEKDKEMQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTSAG 000000001111000000000000000000000000000000000 CGRFSQAMEVETGKPSGPSSG 000000000000000235789 >Calcyclin-binding protein; SWP:Q9HB71; PDB:1X5MA GSSGSSGVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVP 999999999865331000000000000000000000000000000 TENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKV 000000000000000000000000000000000000000000000 KTDTVLILCRKKVENTRWDYLTQVEKECKEKSGPSSG 0000000000000000000000000000001358999 >Harmonin; SWP:Q9Y6N9; PDB:1X5NA GSSGSSGSPGNRENKEKKVFISLVGSRGLGCSISSGPIQKPGIFI 999999987543210000000000111100000000000000000 SHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSSRS 000010000000000000000000000000000000000000000 LTISIVAAAGRELFMTDRSGPSSG 000000000000001123445578 >RNA binding motif, single; SWP:P29558; PDB:1X5OA GSSGSSGLKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENM 999999999999999999864310000000000000000000000 LKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKF 000000000000000000000000000000000000000000000 IKTPPGVSAPTEPLLCKFSGPSSG 000000000000000000011246 >Negative elongation facto; SWP:P18615; PDB:1X5PA GSSGSSGERRAPRKGNTLYVYGEDMTPTLLRGAFSPFGNIIDLSM 999999988754310000000000000000000000000000000 DPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQPML 000000000000000000000000000000000000000011233 DSGPSSG 5678999 >LAP4 protein; SWP:Q14160; PDB:1X5QA GSSGSSGEPARIEEEELTLTILRQTGGLGISIAGGKGSTPYKGDD 999987533100000000000001111000000000100001000 EGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEAL 000000000000000000000000000000000000000000000 RGAGTAVQMRVWRESGPSSG 00000000000000124578 >Glutamate receptor intera; SWP:Q9C0E4; PDB:1X5RA GSSGSSGGGQIVHTETTEVVLCGDPLSGFGLQLQGGIFATETLSS 999999875432100000000000000000000000000000000 PPLVCFIEPDSPAERCGLLQVGDRVLSINGIATEDGTMEEANQLL 000000000000000000000000000000000000000000000 RDAALAHKVVLEVEFDSGPSSG 0000000000000000123457 >Cold-inducible RNA-bindin; SWP:Q14011; PDB:1X5SA GSSGSSGMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVV 998877654321000000000000000000000000000000000 KDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 001110100000000000000000000000000000000000001 KSSDNRSGPSSG 234568999999 >Splicing factor 3B subuni; SWP:Q15427; PDB:1X5TA GSSGSSGIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTG 322211000000000000000000000000000000000001111 NSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKG 000000000000000000000000000000000000001345667 SGPSSG 899999 >Splicing factor 3B subuni; SWP:Q15427; PDB:1X5UA GSSGSSGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNT 999999996531100000000000000000000000000000000 HMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVN 000001100001000000000000000000000000000000000 KASAHNKNLSGPSSG 000012356789999 >PcFK1; SWP:P83591; PDB:1X5VA ACGILHDNCVYVPAQNPCCRGLQCRYGKCLVQV 100000000000010000000000000000002 >Zinc finger protein 64, i; SWP:NA; PDB:1X5WA GSSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSF 999999976456777865433343133323434443433355443 DTKQPSNLSKHMKKFHGDMSGPSSG 2243332112222344466789999 >Fibronectin type-III doma; SWP:NA; PDB:1X5XA GSSGSSGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILE 864321000000000000000000000000011112211000000 MEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKS 001233321000000000000000000000000000000000000 NPSEVVEFTTCPDSGPSSG 0000000000001246799 >myosin binding protein C,; SWP:NA; PDB:1X5YA GSSGSSGPTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLV 986421000000000000000000000000000001110000000 EYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVGVNIAG 000000000000000000000000000000000000000000000 RSEPATLLQPVTIRESGPSSG 000000000000000124689 >Receptor-type tyrosine-pr; SWP:NA; PDB:1X5ZA GSSGSSGDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRSDT 999999999997642100000000000000000000000000000 IANYELVYKDGEHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAAR 000000000000000000000000000000000000000000000 SPQGLGASTAEISARTMQSSGPSSG 0000000000000000000123568 >Sporulation-specific N-ac; SWP:NA; PDB:1X60A LKKTSSSGLYKVQIGAFKVKANADSLASNAEAKGFDSIVLLKDGL 999753100000000000000000000000000000000000000 YKVQIGAFSSKDNADTLAARAKNAGFDAIVILES 0000000000000000000000000000000001 >Thyroid receptor interact; SWP:NA; PDB:1X61A GSSGSSGCGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLRG 875311000000000011110000000000000000000000010 QHFYAVERRAYCEGCYVATLESGPSSG 000000000000000000000124567 >C-terminal LIM domain pro; SWP:NA; PDB:1X62A GSSGSSGSIGNAQKLPMCDKCGTGIVGVFVKLRDRHRHPECYVCT 999999999864311000000000000000000000000000000 DCGTNLKQKGHFFVEDQIYCEKHARERVSGPSSG 0000000000000000000000000000123589 >Skeletal muscle LIM-prote; SWP:NA; PDB:1X63A GSSGSSGKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFT 999999997643200000000000000000000000000000000 CSNCKQVIGTGSFFPKGEDFYCVTCHETKFASGPSSG 0000000000000000100000000000000124579 >Alpha-actinin-2 associate; SWP:NA; PDB:1X64A GSSGSSGVRAPVTKVHGGAGSAQRMPLCDKCGSGIVGAVVKARDK 999999999999999999996420000000000000000000000 YRHPECFVCADCNLNLKQKGYFFVEGELYCETHARARTSGPSSG 00000000000000000000000000000000000000023457 >UNR protein; SWP:NA; PDB:1X65A GSSGSSGREMGVIAAMRDGFGFIKCVDRDVRMFFHFSEILDGNQL 655431000000000000000000000000000000000000000 HIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHSHSGPSSG 00000000000112223210000000000000001345667789 >Friend leukemia integrati; SWP:NA; PDB:1X66A GSSGSSGPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYSL 999999999866442110000000000000000000000000000 MEIDTSFFQNMDGKELCKMNKEDFLRATTLYNTEVLLSHLSYLRE 000000000000000000000000000000000000000000000 SSSGPSSG 01346899 >Drebrin-like protein; SWP:NA; PDB:1X67A GSSGSSGMAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSN 999864210010000000000000000000000000000000000 DIRVAGTGEGGLEEMVEELNSGKVMYAFCRVKDPNSGLPKFVLIN 000000000000000000000000000000000000000000000 WTGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECI 000000000000000000000000000000000000000000000 MEKVASGPSSG 00000011357 >FHL5 protein; SWP:NA; PDB:1X68A GSSGSSGCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSL 986431000000000112111000000000000000000000000 VGKGFLTQNKEIFCQKCGSGMDTDISGPSSG 0100000000000000001235678999999 >LIM domain kinase 2; SWP:NA; PDB:1X6AA GSSGSSGKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACM 999998765443321111111111222111111111111110000 SCKVIIEDGDAYALVQHATLYCGKCHNEVVSGPSSG 001000111100000121000000000000123579 >Rho guanine exchange fact; SWP:NA; PDB:1X6BA GSSGSSGWQGLSSKGDLPQVEITKAFFAKQADEVTLQQADVVLVL 999877666554321100000000000000000000000000000 QQEDGWLYGERLRDGETGWFPEDFARFISGPSSG 0000000000000000000000000000012346 >Tyrosine-protein phosphat; SWP:NA; PDB:1X6CA GSSGSSGWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVL 976421000000000000000000000000000000000000000 SVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVE 000000000000000000000000000000000000000000000 HFKKTGIEEASGAFVYLRQPYYSGPSSG 0000000000000000000000112468 >Interleukin-16; SWP:NA; PDB:1X6DA GSSGSSGATLKQLDGIHVTILHKEEGAGLGFSLAGGADLENKVIT 999999997653210000000000000000000000000000000 VHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQA 000000000000000000000000000000000000000000000 REPRQAVIVTRKLTPEAMPDLNSSGPSSG 00000000000011233568999999999 >Zinc finger protein 24; SWP:NA; PDB:1X6EA GSSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKC 999999999999765679899774433431332233455434334 LECGKAFSQNSGLINHQRIHTSGPSSG 666643233343122222344568999 >Zinc finger protein 462; SWP:NA; PDB:1X6FA GSSGSSGLKRDFIILGNGPRLQNSTYQCKHCDSKLQSTAELTSHL 999999999999999997654320000000000000000000000 NIHNEEFQKRAKRQERRKQLLSKQKYADGAFADFKQESGPSSG 0000000000134689999999999999999999999999999 >Megakaryocyte-associated; SWP:NA; PDB:1X6GA GSSGSSGRMPTRRWAPGTQCITKCEHTRPKPGELAFRKGDVVTIL 999987665421000000000000000000000000000000000 EACENKSWYRVKHHTSGQEGLLAAGALRERSGPSSG 001211000000000000000000000000135689 >Transcriptional repressor; SWP:NA; PDB:1X6HA GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVP 999999986542100000111100000000000000000000000 AAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSSG 00000000000000000000000001112356899999999 >hypothetical protein HP02; SWP:NA; PDB:1X93A TRAVSLYFSDEQYQKLEKMANEEEESVGSYIKRYILKALRKIEMR 1000000000000000000000000000000000000000012-- GSHHHHHHGS ---------- >hypothetical membrane pro; SWP:NA; PDB:1X9BA RNLSDRAKFESMINSPSKSVFVRNLNELEALAVRLGKSYRIQLDQ 532000000000000000000000000000000000000000000 AKEKWKVK 00000012 >Hypothetical UPF0054 prot; SWP:NA; PDB:1XAXA MGSVLVDLQIATENIEGLPTEEQIVQWATGAVQPEGNEVEMTVRI --1000000011221111100000000000001121110000000 VDEAESHELNLTYRGKDRPTNVLSFPFECPDEVELPLLGDLVICR 000000000000110000110000001112121110000000000 QVVEREASEQEKPLMAHWAHMVVHGSLHLLGYDHIEDDEAEEMES 000000000000000000000000000001011111100000000 LETQIMQGLGFDDPYLAEK 00000000001-------- >Pardaxin P-4; SWP:NA; PDB:1XC0A GFFALIPKIISSPLFKTLLSAVGSALSSSGGQE 111000000000000000000000000011234 >Nuclear receptor corepres; SWP:NA; PDB:1XC5A GSMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLI ---986532110000000000000000000000000000000000 ASFLERKTVAECVLYYYLTKKNENYK 00000000000000000001111123 >Tctex1 Light Chain protei; SWP:NA; PDB:1XDXA MEGVDPAVEEAAFVADDVSNIIKESIDAVLQNQQYSEAKVSQWTS 421101100000010000000000000000000000000000000 SCLEHCIKRLTALNKPFKYVVTCIIMQKNGAGLHTAASCWWDSTT 000000000000000000000000000111111111111111100 DGSRTVRWENKSMYCICTVFGLAI 110000000011000000000011 >chemotaxis-inhibiting pro; SWP:NA; PDB:1XEEA NSGLPTTLGKLDERLRNYLKKGTKNSAQFEKMVILTENKGYYTVY 765321000000000000001111111000000000000000000 LNTPLAEDRKNVELLGKMYKTYFFKKGESKSSYVINGPGKTNEYA 000000000000000000000000001100000000000100111 Y 2 >Wilms' Tumor Protein; SWP:NA; PDB:1XF7A KPFQCKTCQRKFSRSDHLKTHTRTHTGEK 00000000000000000000000001135 >Thioredoxin h1; SWP:NA; PDB:1XFLA MGHHHHHHLEMASEEGQVIACHTVETWNEQLQKANESKTLVVVDF ----------43211100000000000000000000000000000 TASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQ 000000000000000000000010000000000000000000000 AMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 0000000000000000000000000000000002 >Nitrogen Fixation Protein; SWP:NA; PDB:1XHJA MPTENPTMFDQVAEVIERLRPFLLRDGGDCTLVDVEDGIVKLQLH 643221100000000000000000001000000001100000000 GACGTCPSSTITLKAGIERALHEEVPGVIEVEQVFLEHHHHHH 1122211110010000000111111111000000123689999 >Hypothetical UPF0131 prot; SWP:NA; PDB:1XHSA MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLGHYPGAV 000000111232243222121000000000000000001100000 PGNGTVHGEVYRIDNATLAELDALRTRGGEYARQLIQTPYGSAWM 000000000000000000000011112210000000000000000 YVYQRPVDGLKLIESGDWLDRDKLEHHHHHH 00011111110000000111345-------- >NifU-like protein; SWP:NA; PDB:1XJSA MSFNANLDTLYRQVIMDHYKNPRNKGVLNDSIVVDMNNPTCGDRI 986432110000000010011111000010000000001111100 RLTMKLDGDIVEDAKFEGEGCSISMASASMMTQAIKGKDIETALS 000000000000000000000000000000000000000000000 MSKIFSDMMQGKEYDDSIDLGDIEALQGVSKFPARIKCATLSWKA 000001111122322212111100000100111100000000000 LEKGVAKEEGGN 000001112346 >Ran-binding protein 2; SWP:NA; PDB:1XKEA GSGEEDEKVLYSQRVKLFRFDAEVSQWKERGLGNLKILKNEVNGK 543110000000000000000110000000000000000011111 LRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDG 000000000000000000000000000001110000000001111 DAKLEQLAAKFKTPELAEEFKQKFEECQRLLLDIPLQTPK 1100000000000000000000000000001111123467 >Distinctin chain A; SWP:NA; PDB:1XKMA ENREVPPGFTALIKTLRKCKII ---------------0------ >Distinctin chain B; SWP:NA; PDB:1XKMB NLVSGLIEARKYLEQLHRKLKNCKV 5322111111111111111113--- >Peptide methionine sulfox; SWP:NA; PDB:1XM0A MAYNKEEKIKSLNRMQYEVTQNNGTEPPFQNEYWDHKEEGLYVDI 755433211221111111111122222222111222221100011 VSGKPLFTSKDKFDSQCGWPSFTKPIEEEVEEKLDTSHGMIRTEV 111101012321122332210011101111111112322111011 RSRTADSHLGHVFNDGPGPNGLRYCINSAALRFVPKHKLKEEGYE 112222111100012232211000000000000011111121111 SYLHLFNKLEHH 111111344578 >Chimeric CD3 mouse Epsilo; SWP:NA; PDB:1XMWA DDAENIEYKVSISGTSVELTCPLDSDENLKWEKNGQELPQKHDKH 754322000000000000000000000000000000001100000 LVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAA 000000000000000000000000000000000012457999999 KKDDAKKDDAKKDGSQTNKAKRALEVLEAEDKVILKCNSSITLLQ 999999999999999766442100000000000000000000000 GTAGQEVSDNKTLNLGKRIEDPRGMYQCGENAKSFTLQVYYRM 0000001110000000000000000000122210000000013 >BH1534 unknown conserved; SWP:NA; PDB:1XN5A MTRLPDIKKEVRFNAPIEKVWEAVSTSEGLAFWFMENDLKAETGH 421000000000000000000000000000000000000000000 HFHLQSPFGPSPCQVTDVERPIKLSFTWDTDGWSVTFHLKEEENG 000000000000000000000000000001100000000000000 TIFTIVHSGWKQGDTKVEKAGAESAVVHERMDRGWHDLVNERLRQ 000000000000111011111000000000000000000000000 IVELEHHHHHH 000-------- >hypothetical protein BC47; SWP:NA; PDB:1XN6A MEQQNTLNDIKQTIVFNASIQKVWSVVSTAEGIASWFMPNDFVLE 543321000000000000000000000000000000000000000 VGHEFHVQSPFGPSPCKVLEIDEPNHLSFSWDTDGWVVSFDLKDL 000000001111000000000000000000000000000000000 GDNKTEFTLIHGGWKHPDEILPKANAKSSIIRDRMSGGWVAIVNE 000000000000000000000110000000000000000000000 KLKKVVEG 00000000 >Hypothetical protein yhgG; SWP:NA; PDB:1XN7A MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGK 210000000000000000000000000000000000000000000 AVRIQEEPDGCLSGSCKSCPEGKACLREWWALR 000000011233455677654321000000000 >30S ribosomal protein S24; SWP:NA; PDB:1XN9A MDIKIIKDKKNPLLNRRELDFIVKYEGSTPSRNDVRNKLAAMLNA 000000000000000000000000000000000000000000000 PLELLVIQRIKTEYGMQESKGYAKLYEDADRMKQVEQEYVLKRNA 000000000000001000000000000000000000000112344 VPGSETEGEEA 56788999999 >hypothetical protein PF04; SWP:NA; PDB:1XNEA MKVYRLYLKDEYLEMVKSGKKRIEVRVAYPQLKDIKRGDKIIFND 000000000000000000000000010001000000000000000 LIPAEVVEVKKYETFRQVLREEPIDKIFPDKPSFEKALKRFHNMY 000000000000100000000000000000000000000001112 PKWKEYRYGVLAIKFRVLGRDKE 33333321100000000001134 >membrane protein gp37; SWP:NA; PDB:1XNLA GPTARIFASILAPGVAAAQALREIERLA 3222212111100000000000000000 >At1g01470; SWP:NA; PDB:1XO8A MASLLDKAKDFVADKLTAIPKPEGSVTDVDLKDVNRDSVEYLAKV 976789999997754321112100000000000010000000000 SVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTAL 000001000000000000000000000000000000000000000 DIPVVVPYSILFNLARDVGVDWDIDYELQIGLTIDLPVVGEFTIP 000000000000000000000000000000000000000000000 ISSKGEIKLPTFKDFF 0000000000011112 >hypothetical protein At3g; SWP:NA; PDB:1XOYA SSAESASQIPKGQVDLLDFIDWSGVECLNQSSSHSLPNALKQGYR 654433211111000000001001000001111100000001111 EDEGLNLESDADEQLLIYIPFNQVIKLHSFAIKGPEEEGPKTVKF 112110001110000000000000000000000000000000000 FSNKEHMCFSNVNDFPPSDTAELTEENLKGKPVVLKYVKFQNVRS 001111101100111000000000000000000000111110000 LTIFIEANQSGSEVTKVQKIALYGST 00000000011010000000000001 >XPA; SWP:P23025; PDB:1XPA MEFDYVICEECGKEFMDSYLMNHFDLPTCDNCRDADDKHKLITKT 000000000000000000000000000000000000000000000 EAKQEYLLKDCDLEKREPPLKFIVKKNPHHSQWGDMKLYLKLQIV 000000000000000000000000000000000000000000000 KRSLEVWGSQEALEEAKEVRQEN 00000000000000000000000 >hypothetical protein PA13; SWP:NA; PDB:1XPNA GSSHHHHHHSSGLVPRGSHMASNPNDLPDFPEHEYAATQQVGGGV 999999999999999999998865321122211111111110000 INGDLYLTSASGAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAK 000000000111100000000000000000000000000000011 RDPDVQPPVLDPRRATYVREATTDQNGRFDFDHIPNGTYYISSEL 111111111101000000000000000000000000000000000 TWSAQSDGKTITEGGTVTKLVTVSGSQPQKVLLTR 00000111000000000000000010000000001 >hypothetical protein XC97; SWP:NA; PDB:1XS3A MRKRPLDAETIRKLIESGLPEARVDVQGEDGVHFEATVVSPAFVG 865331000000000000000000000000000000000000000 KAPLARHRMVYATLGELMGGAIHALQLKTLTPDEA 00000000000000000000100000000000000 >UPF0269 protein yggX; SWP:NA; PDB:1XS8A MSRTIFCTYLQRDAEGQDFQLYPGELGKRIYNEISKDAWAQWQHK 210000000000000011111110000000000000000000000 QTMLINEKKLNMMNAEHRKLLEQEMVSFLFEGKDVHIEGYTPEDK 000000000001100000000000000000011111123445667 K 8 >Bis(5'-nucleosyl)-tetraph; SWP:NA; PDB:1XSAA GPLGSMALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTP 753110000000000000000011110000000000000000000 PKGHVEPGEDDLETALRATQEEAGIEAGQLTIIEGFKRELNYVAR 000000000000000000000000000000000000000000001 NKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQFKE 100000000000000000000000000000000000000000000 MKAALQEGHQFLCSIEAL 000000000000000001 >Probable resuscitation-pr; SWP:NA; PDB:1XSFA NVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAI 999999999999999999876432110000000000000000000 NTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTR 000000000000000000000000000000000000000000000 LRQGWGAWPVCAARAGAR 000000000000000001 >prion protein; SWP:NA; PDB:1XU0A GSGYNKQWKPPKSKTNMKSVAIGAAAGAIGGYMLGNAVGRMSYQF ----------------------------11101010011000111 NNPMESRYYNDYYNQMPNRVYRPMYRGEEYVSEDRFVRDCYNMSV 100000000000000000000000011111100000000000000 TEYIIKPAEGKNNSELNQLDTTVKSQIIREMCITEYRRGS 0000000111111100000000000000000000000111 >Variant surface glycoprot; SWP:NA; PDB:1XU6A GSHMLEVLTQKHKPAESQQQAAETEGSCNKKDQNECKSPCKWHND 999999999999999764331100000000000000000000001 AENKKCTLDKEEAKKVADETAKDGKTGNTNTTGSS 11100000000000000013456899999999999 >Penaeidin-4d; SWP:NA; PDB:1XV3A HSSGYTRPLRKPSRPIFIRPIGCDVCYGIPSSTARLCCFRYGDCC 999999999999986421000000000000000000000000000 HL 01 >Complement C5; SWP:NA; PDB:1XWEA GSHMADCGQMQEELDLTISAETRKQTACKPEIAYAYKVSITSITV 753211111000100100000000000000000000000000000 ENVFVKYKATLLDIYKTGEAVAEKDSEITFIKKVTCTNAELVKGR 110000000000000000011000000000000001110000000 QYLIMGKEALQIKYNASFRYIYPLDSLTWIEYWPRDTTCSSCQAF 000000000111345542110000000000000001113332110 LANLDEFAEDIFLNGC 0000000000000111 >Autoimmune regulator; SWP:NA; PDB:1XWHA GAMAQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSG 875321000000000000000000000000000000000000010 TWRCSSCLQATVQEVQPRAEE 000000000012468999999 >Peptidyl-prolyl cis-trans; SWP:NA; PDB:1XWNA MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARR 999999875321000000000000000000000000000000000 GYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDL 000000000000110000011224443211101110010011111 KFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQG 111100000000111100000000000001100000000000000 IGMVNRVGMVETNSQDRPVDDVKIIKAYPSGLEHHHHHH 0000000000101110000110000000012-------- >Major prion protein; SWP:NA; PDB:1XYXA VVGGLGGYMLGSAMSRPMIHFGNDWEDRYYRENMYRYPNQVYYRP 111101000000000000000000000000000000000000000 VDQYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVV 012110000000000000000000000000000000000000000 EQMCVTQYQKESQAYYDGRRSS 0000000000000000112356 >Antifreeze peptide SS-3; SWP:NA; PDB:1Y03A GSMNAPARAAAKTAADALAAAKKTAADAAAAAAAA 76532221111111111010000000011112234 >Elastase inhibitor; SWP:NA; PDB:1Y1BA KPDCPLICTMQYDPVCGSDGITYGNACMLLGASCRSDTPIELVHK 531111000110000000000000000000000001100000000 GRC 000 >Humanin; SWP:NA; PDB:1Y32A MAPRGFSCLLLLTSEIDLPVKRRA 310000000000000012334568 >Copper-transporting ATPas; SWP:NA; PDB:1Y3JA NSSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEV 210000000111211110000001012110000110001100000 RYNPAVIQPPMIAEFIRELGFGATVIENIEGR 00000000000000000001100000124679 >RNA polymerase II transcr; SWP:NA; PDB:1Y5OA PSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTI 210000000000000000000000000000000000000000000 DKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHMFS 000000000000000000001234567899999864311000000 FNNRTVMDNIKMTLQQIISRYKDAD 0000000000000000000000001 >Phosphorelay protein luxU; SWP:NA; PDB:1Y6DA MNTDVLNQQKIEELSAEIGSDNVPVLLDIFLGEMDSYIGTLTELQ 111100000000000000000000000000000000000000000 GSEQLLYLKEISHALKSSAASFGADRLCERAIAIDKKAKANQLQE 100000000000000000000000000000000000000011111 QGMETSEMLALLHITRDAYRSWTN 111000000000000000000011 >Excisionase from transpos; SWP:NA; PDB:1Y6UA AGHMKQTDIPIWERYTLTIEEASKYFRIGENKLRRLAEENKNANW --------0000000000000000000000000000000000000 LIMNGNRIQIKRKQFEKIIDTLDAI 0000000000000000000000--- >Agouti Signaling Protein; SWP:NA; PDB:1Y7JA KKVVRPRTPLSAPCVATRNSCKPPAPACCDPCASCYCRFFRSACY -------------11101001233332111100000001110000 CRVLSLNC 00012333 >Zinc finger protein 174; SWP:NA; PDB:1Y7QA GSKNCPDPELCRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPEL 999987653322222222222222221111110011011111222 HTKEQILELLVMEQFLTILPEEIQARVRHRCLMSSKEIVTLVEDF 211111111100110011111111112223322111100000111 HRASKKPK 11256899 >Major vault protein; SWP:NA; PDB:1Y7XA GSHMQVVLPNTALHLKALLDFEDKDGDKVVAGDEWLFEGPGTYIP 753111101000000000000122332100000000000011000 RKEVEVVEIIQATIIRQNQALRLRARKECWDRDGKERVTGEEWLV 000000000000000111000000000100001111001000000 TTVGAYLPAVFEEVLDLVDAVIL 01111101000000000001247 >Unc-13 homolog A; SWP:NA; PDB:1Y8FA GSPGISGGGGGIQHNFEVWTATTPTYCYECEGLLWGIARQGMRCT ------------000000000000000000000001000000000 ECGVKCHEKCQDLLNADCKLN 000000000000000000--- >Fis1; SWP:NA; PDB:1Y8MA MTKVDFWPTLKDAYEPLYPQQLEILRQQVVSEGGPTATIQSRFNY 865431000000000000000000000000000000000000000 AWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKL 000000000000000000000000000100000000000000000 GEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQKETLKGVVVA 000000000000000111110000000000000001123467999 GGVHHHHHH 999999999 >Sec1 family domain contai; SWP:NA; PDB:1Y9JA GSPGISGGGGGILVGSKMAASIRERQTVALKRMLNFNVPHVKNSP -------------------00000000000000000001111222 GEPVWKVLIYDRFGQDIISPLLSVKELRDMGITLHLLLHSDRDPI 110000000000000000000000000000000000000000000 RDVPAVYFVMPTEENIDRLCQDLRNQLYESYYLNFISAISRSKLE 000000000000000000000000000000000000000000000 DIANAALAANAVTQVAKVFDQYLN 000000000000000000000000 >At5g01610; SWP:NA; PDB:1YDUA SDQIFNKVGSYWLGQKANKQFDSVGNDLNSVSTSIEGGTKWLVNK 999999999999999999999999999999999999999999999 IKGKMQKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPS 997653211110000110000001100000011221100000000 ICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTKVMIWVKVTS 000112331100000000000000000000000000110000110 ISTDASKVYFTAGMKKSRSRDAYGVQRNGLRVDKF 00000010111222111110000001111100113 >At1g16640; SWP:NA; PDB:1YELA GSMADTGEVQFMKPFISEKSSKSLEIPLGFNEYFPAPFPITVDLL --6532110000000000000000000000001110100000000 DYSGRSWTVRMKKRGEKVFLTVGWENFVKDNNLEDGKYLQFIYDR 011100000000001100000000000000000000000000011 DRTFYVIIYGHNMC 10000000023346 >hypothetical protein MM13; SWP:NA; PDB:1YEZA MFREESRSVPVEEGEVYDVTIQDIARQGDGIARIEGFVIFVPGTK 986554221000000000000000011100000000000000000 VGDEVRIKVERVLPKFAFASVVE 00000000000000000000001 >hypothetical protein BSU3; SWP:NA; PDB:1YGMA GSHGMFCTFFEKHHRKWDILLEKSTGVMEAMKVTSEEKEQLSTAI ------123223222100000001111112111110000000000 DRMNEGLDAFIQLYNESEIDEPLIQLDDDTAELMKQARDMYGQEK 000000001011111212223332211011000000001111111 LNEKLNTIIKQILSISVSEEGEKELVPR 1000000000011111122243223568 >UPF0269 protein yggX; SWP:NA; PDB:1YHDA MGSRTIFCTFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQH 421000000000000000000000000000000000000000000 KQTMLINEKKLNMMNAEHRKLLEQEMVNFLFEGKEVHIEGYTPED 000000000000000000000000000000000112357899999 KKLEHHHHHH 99-------- >Calcium-dependent cell ad; SWP:NA; PDB:1YHPA SVDANKVKFFFGKNCTGESFEYNKGETVRFNNGDKWNDKFMSCLV 100000000001111110000000000000111110000000000 GSNVRCNIWEHNEIDTPTPGKFQELAQGSTNNDLTSINGLSKFQV 000000000000001111110000000000001000110000000 LPGAFQWAVDVKIVNKVNSTAGSYEMTITPYQVDKVACKDGDDFV 000000000000000111111000000000000100000000100 QLPIPKLTPPDSEIVSHLTVRQTHTPYDYVVNGSVYFKYSPTTGQ 000011100000000000000011111100000000000011000 VTVIKKDETFPKNMTVTQDDNTSFIFNLNSEK 00000011001110000000100000001111 >Itchy E3 ubiquitin protei; SWP:NA; PDB:1YIUA GAMGPLPPGWEKRTDSNGRVYFVNHNTRITQWEDPRS 6531000000000000000000000000000000011 >Copper-transporting ATPas; SWP:NA; PDB:1YJRA MGDGVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAH 321100000000011100000000000001000000000000000 IKYDPEIIGPRDIIHTIESLGFEPSLVKIE 000000000000000000000000001235 >monothiol glutaredoxin yd; SWP:NA; PDB:1YKAA MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGE 653100000000000000000000000000000000000000000 RFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEM 000000000000000000000000000000000000000000000 YQRGELQQLIKETAAKYKSEEPDAE 0000000000000000001001011 >Sulfite reductase [NADPH]; SWP:NA; PDB:1YKGA ATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVN -----------0000000000000000000000000000000000 AGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPK 000000000000000000000000000000000000000111111 LENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDAD 110000000000000000000000000000000000000000000 VEYQAAASEWRARVVDALKSRAPVAAPSQSVA 0000000000000000000112---------- >Replication factor-A prot; SWP:NA; PDB:1YNXA TRPIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRGDGKLFNVN 211111111000011100000000000000012222210000000 FLDTSGEIRATAFNDFATKFNEILQEGKVYYVSKAKLQPAKPQFT 000000000000000000000000000000000000001122232 NLTHPYELNLDRDTVIEECFDESN 222111000011100000124579 >Kti11p; SWP:NA; PDB:1YOPA MVSTYDEIEIEDMTFEPENQMFTYPCPCGDRFQIYLDDMFEGEKV 531000000000000010000000000000000000000000000 AVCPSCSLMIDVVFDKEDLAEYYEEAGIHPPEPIAAAA 00000000000000000000000000112478999999 >tricyclon A; SWP:NA; PDB:1YP8A CGESCFLGTCYTKGCSCGEWKLCYGTNGGTIFD 000000110000000000100000000000000 >cell-division initiation; SWP:NA; PDB:1YR1A GSEWRRIAYVYDRQTFFPLLENGRLLKQEGTKTAPSDAPVLVGWK 310000000000000000000000000000000000000000000 DGDAIAEMTGQLAELPAAVLGAMSEIHYKPTREYEDRVIVYMNDG 000000000000000000000000000000000000000000000 YEVSATIRQFADKLSHYPAIAAALDRNVK 00000000000000000000000000246 >lipoprotein; SWP:NA; PDB:1YS5A MQSHSALTAFQTEQIQDSEHSGKMVAKRQFRIGDIAGEHTSFDKL 999999999986467764334345899999998643221122222 PEGGRATYRGTAFGSDDAGGKLTYTIDFAAKQGNGKIEHLKSPEL 222211111000011111000011111121111100011111111 NVDLAAADIKPDGKRHAVISGSVLYNQAEKGSYSLGIFGGKAQEV 000111111122222211111100111110000011112211111 AGSAEVKTVNGIRHIGLAAKQLEHHHHHH 000000111111100000011-------- >DNA-binding protein SATB1; SWP:NA; PDB:1YSEA GSHVSRSMNKPLEQQVSTNTEVSSEIYQWVRDELKRAGISQAVFA ------------------421000000000000000000000000 RVAFNRTQGLLSEILRKEEDPKTASQSLLVNLRAMQNFLQLPEAE 000000010000000000000010000000000000000000000 RDRIYQDERERSLNAASAMGPAPLISTPPSRPPQVKTATIATERN 0000001234568999----------------------------- GKPENN ------ >Calcyclin-binding protein; SWP:NA; PDB:1YSMA MASVLEELQKDLEEVKVLLEKSTRKRLRDTLTSEKSKIETELKNK 100000000000000000000000000000000000000000000 MQQKSQKKPELDNEKPAAVVAPLTTGYTVKIS 0123568999---------------------- >Replicase polyprotein 1ab; SWP:NA; PDB:1YSYA GHSKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLAK 432112211111000000001111122100000000000000000 DTTEAFEKMVSLLSVLLSMQGAVDINRLCEEMLDNRATLQ 0000000000000000000001110000011100000111 >Bacteriocin plantaricin A; SWP:NA; PDB:1YTRA KSSAYSLQMGATAIKQVKKLFKKWGW 99987654200000000000000023 >TOPOISOMERASE I; SWP:NA; PDB:1YUA_ MNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPK 865432222210000000000110000000012100000000000 SRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSR 000000000000000000000000000000001110000000000 KTKQQYVSSEKDGKATGWSAFYVDGKWVEGKK 00000000001111100000000000000012 >MrR5; SWP:NA; PDB:1YVCA MAFGKPAMKNVPVEAGKEYEVTIEDMGKGGDGIARIDGFVVFVPN 999976442100000000000000000111000000000000000 AEKGSVINVKVTAVKEKFAFAERVL 0000000000000000000000000 >Hypothetical UPF0213 prot; SWP:NA; PDB:1YWLA MENKKSHYFYVLLCQDGSFYGGYTTEPERRLTEHNSGTGAKYTRL 311111000000011111100000100000000111123445566 AKRRPVIMIHTEKFETRSEATKAEAAFKKLTRKQKEQYLKTFHLE 432111001110101111000000000010010000011111111 HHHHHH 234557 >hypothetical protein PA46; SWP:NA; PDB:1YWUA MGSSHHHHHHSSGRENLYFQGHMSDQHDERRRFHRIAFDADSEIL ----------------------99999987643211000000000 QGERRWEVLLHDVSLHGILVGQPQDWNGDPQRPFEARLYLGLDVL 011000000000000000000011112211100000000001100 IRMEISLAWARDGLLGFECQHIDLDSISHLRRLVELNLGDEELLE 000000000001000000000000000000000000001000000 RELALLVSAHDDGS 000000011123-- >Hypothetical protein PA47; SWP:NA; PDB:1YWWA MGSSHHHHHHSSGLVPRGSHMNSDVIKGKWKQLTGKIKERWGDLT --------------------5321000100000000000010000 DDDLQAADGHAEYLVGKLQERYGWSKERAEQEVRDFSDRL 0000011110000000000000000000000000000011 >30S ribosomal protein S24; SWP:NA; PDB:1YWXA MDISIISDRNNPLLQRREIKFTVSFDAATPSIKDVKMKLVAVLNA 100000000000000000000000001100000000000000000 NKQVLVVDTLDQIFGKLEAEGYAKIYNDEKAMATIETKSVLEKNK 000000000000000000000000000000000000000000001 IEEEAEAEVAEE 236999999999 >hypothetical protein PA20; SWP:NA; PDB:1YWYA MSIEIDSEQGVCSVEIEGSRHRAPVDSLRIGTDAEARLSVLYIDG 000000000000000111110000000000000000000000000 KRLHISEEDAQRLVVAGAEDQRRHLMADD 00000000000000000000001223457 >hypothetical protein ysnE; SWP:NA; PDB:1YX0A MHIKIDDLTGRQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPE 100000011110011011111234578889988754322111110 ITFWSAWEGDELAGCGALKELDTRHGEIKSMRTSASHLRKGVAKQ 000000001100000000000000000010001222212210000 VLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQYCEPF 000000000000000000001111111000000000000011111 ADYGEDPNSVFMTKKLLEHHHHHH 1122112111100000-------- >hypothetical protein DsrC; SWP:NA; PDB:1YX3A MGSSHHHHHHSSGLVPRGSHMADTIEVDGKQFAVDEEGYLSNLND --------------------2100000100000001000000010 WVPGVADVMAKQDNLELTEEHWDIINFLREYYEEYQIAPAVRVLT 000000000000000000000000000000000000000000000 KAVGKKLGKEKGNSKYLYSLFPYGPAKQACRFAGLPKPTGCV 000000111111100000000000000000000001011346 >26S proteasome non-ATPase; SWP:NA; PDB:1YX4A MGHHHHHHHHHHSSGHIEGRHMLGLGASDFEFGVDPSADPELALA --------------------9999999999999999999999998 LRVSMEEQRQRQEEEARRAAAASAAEAGIATTGTEDSDDALLKMT 877666555555455555666778899999998888767655566 ISQQEFGRTGLPDLSSMTEEEQIAYAMQMSLQGAEFGQAESA 668888999999999999999998899999999999999999 >vacuolar protein sorting; SWP:NA; PDB:1YXRA MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKY 210000000000000000000000000000000000000000000 EAHSDKAKESIRAKCVQYLDRAEKLKDYLRSK 00000000000000000000000000000000 >Programmed cell death pro; SWP:NA; PDB:1YYBA GSADEELEALRRQRLAELQAKHGDPGD -00000000000000000000246799 >putative late embryogenes; SWP:NA; PDB:1YYCA GHHHHHHLEASADEKVVEEKASVISSLLDKAKGFFAEKLANIPTP 999998665321111000000000000000000011111111100 EATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQISYILKSA 000000000111111100000000000011000100000000001 TRTIASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCTDW 110000000000000110000000000000000111111111111 DIDYQLDIGLTFDIPVVGDITIPVSTQGEIKLPSLRDFF 000000000000011110000000000000101111112 >Minor tail protein U; SWP:NA; PDB:1Z1ZA MKHTELRAAVLDALEKHDTGATFFDGRPAVFDEADFPAVAVYLTG -00000000000000000000000000000000000000000000 AEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMS 000000000000000000000000000000000000000000000 DIPALSDLITSMVASGYDYRRDDDAGLWSSADLTYVITYEM 0000000000000000000000000000000000000000- >CRK-associated substrate; SWP:NA; PDB:1Z23A GSGREPLELEVAVETLARLQQGVSTTVAHLLDLVGSASGPGGWRS 975421100000000000000000000000000012234667776 TSEPQEPPVQDLKAAVAAVHGAVHELLEFARSAVSSATHTSDRTL 654222210000000000000000000000000001122222100 HAKLSRQLQKMEDVYQTLVVHGQVLDSGRGGPGFTLDDLDRLVAC 000000000000000000000000001233331100000000000 SRAVPEDAKQLASFLHGNASLLFRRTKA 0000000000000000000000013467 >Natural killer cell recep; SWP:NA; PDB:1Z2KA DCPDSSEEVVGVSGKPVQLRPSNIQTKDVSVQWKKTEQGSHRKIE -10000000000000000000001111100000000012110000 ILNWYNDGPSWSNVSFSDIYGFDYGDFALSIKSAKLQDSGHYLLE 000000000000010000000000100000000000000000000 ITNTGGKVCNKNFQLLILD 0122332100000000001 >LM5-1; SWP:NA; PDB:1Z2QA GPLGSMGEKQSKGYWQEDEDAPACNGCGCVFTTTVRRHHCRNCGY 999999987642000000000000000000000000000000000 VLCGDCSRHRAAIPMRGITEPERVCDACYLALRSSNMAG 000000000000000000000000000000000023589 >Anchor peptide Ser65-Leu8; SWP:NA; PDB:1Z2TA SLKGFRLVLFVKRYVRKMRKLKL 76531000000000000001247 >Tor inhibition protein; SWP:Q2EES9; PDB:1Z4HA MQHELQPDSLVDLKFIMADTGFGKTFIYDRIKSGDLPKAKVIHGR 210000000000000000000000000000000000000001111 ARWLYRDHCEFKNKLLSRANG 000000000000000001235 >RC-RNase 3; SWP:Q9DFY7; PDB:1Z5FA DWETFQKKHLTDTKKVKCDVEMAKALFDCKKTNTFIYALPGRVKA 000000000000000000000000000000000000000000000 LCKNIRDNTDVLSRDAFLLPQCDRIKLPCHYKLSSSTNTICITCV 000000000000000000000000000000000000000000000 NQLPIHFAGVGSCP 00000000000001 >TFIIH basal transcription; SWP:Q13888; PDB:1Z60A LDAFQEIPLEEYNGERFCYGCQGELKDQHVYVCAVCQNVFCVDCD 222100000000111100000000000000000111100000000 VFVHDSLHSCPGCI 00112111111111 >Pleruocidin; SWP:P81941; PDB:1Z64A GWGSFFKKAAHVGKHVGKAALTHYL 2000000000000000000000014 >Prion-like protein doppel; SWP:Q9QUG3; PDB:1Z65A MKNRLGTWWVAILCMLLASHLSTVKARGIK 864311000000000000000111235679 >Vitamin K-dependent prote; SWP:P07225; PDB:1Z6CA KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDI 322211121111000011112222111100100000000000000 DECSENMCAQLCVNYPGGYTCYCDGKKGFKLAQDQKSCEVVS 000000001000000000000011111111111100011223 >Biotin/Lipoyl Attachment; SWP:Q9R9I3; PDB:1Z6HA TVSIQMAGNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSG 000000000000000000000000000000000000000000000 IVKEVKKKEGDFVNEGDVLLELSNSTQ 000000000000000000000001135 >glutaredoxin; SWP:Q5PSJ1; PDB:1Z7PA MASKQELDAALKKAKELASSAPVVVFSKTYCGYCNRVKQLLTQVG 530000000000000000000000000000000000000000000 ASYKVVELDELSDGSQLQSALAHWTGRGTVPNVFIGGKQIGGCDT 000000000000000000000000001000000000000000000 VVEKHQRNELLPLLQDAAATAKNPAQL 000000000000000000001112212 >conserved hypothetical pr; SWP:O25554; PDB:1Z8MA MLKLNLKKSFQKDFDKLLLNGFDDSVLNEVILTLRKKEPLDPQFQ 210000000000000000010000000000000001111111100 DHALKGKWKPFRECHIKPDVLLVYLVKDDELILLRLGSHSELF 0000011000000000000000000001000000000000001 >Coxsackievirus B4 polypro; SWP:P08292; PDB:1Z8RA MAHHHHHHERASLITTGPYGHQSGAVYVGNYKVVNRHLATHVDWQ ----------------97654321000000000000000000000 NCVWEDYNRDLLVSTTTAHGCDTIARCQCTTGVYFCASKSKHYPV 000000000000000000010000000000000001221100000 SFEGPGLVEVQESEYYPKRYQSHVLLATGFSEPGDAGGILRCEHG 000000000000001000000000000001222221100000000 VIGLVTMGGEGVVGFADVRDLLWLEDDAMEQ 0000000000000000000000000000134 >DNA primase; SWP:Q9X4D0; PDB:1Z8SA MAKKLLPAFQNAERLLLAHMMRSRDVALVVQERIGGRFNIEEHRA 999986432222111111111122221211111112223222111 LAAYIYAFYEEGHEADPGALISRIPGELQPLASELSLLLIADDVS 111112223343332211111222332222111111222233323 EQELEDYIRHVLNRPKWLMLKVKEQEKTEAERRKDFLTAARIAKE 332222222222233322211111222334455567875543332 MIEMKKMLSSS 11211233345 >Translation initiation fa; SWP:P04766; PDB:1Z9BA NEFELGTRGSSRVDLQEQRSVKTRVSLDDLFEQIKQGEMKELNLI 999999999999999999999999999999999997643110000 VKADVQGSVEALVAALQKIDVEGVRVKIIHAAVGAITESDISLAT 000000000000000000112221000000000000000000000 ASNAIVIGFNVRPDANAKRAAESEKVDIRLHRIIYNVIEEIEAAM 000000000100000000000000000000135689999999999 >conserved hypothetical pr; SWP:NA; PDB:1Z9VA MGSSHHHHHHSSGLVPRGSHMTFCLETYLQQSGEYEIHMKRAGFR -------------------10000000011111110100000000 ECAAMIEKKARRVVHIKPGEKILGARIIGIPPVPIGIDEERSTVM 000000000000000000000001011111100000000000000 IPYTKPCYGTAVVELPVDPEEIERILEVAEP 0110000000000000000000000001112 >vhl-1; SWP:P84522; PDB:1ZA8A CGESCAMISFCFTEVIGCSCKNKVCYLNSIS 0000000000000000000000000000000 >Ubiquitin fusion degradat; SWP:P53044; PDB:1ZC1A MFSGFSSFGGGNGFVNMPQTFEEFFRCYPIAMMNDRIRKDDANFG 999999999999853210000000000000011111110000000 GKIFLPPSALSKLSMLNIRYPMLFKLTANETGRVTHGGVLEFIAE 000000000000000000010000000012110000000000000 EGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFL 000000000000000001000000000001000000000000100 DISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPES 001000000000000000000000000000000000000000000 SSKSICVIETDLVTDFAPPVGYVEPDYK 0000001111100000011234689999 >SWI5; SWP:P08153; PDB:1ZFD_ DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 21100010111100000000000000113479 >Plectasin; SWP:Q53I06; PDB:1ZFUA GFGCNGPWDEDDMQCHNHCKSIKGYKGGYCAKGGFVCKCY 3100111110000000000000110100000011000001 >Hypothetical UPF0213 prot; SWP:Q9KGL3; PDB:1ZG2A MAGDPMNHYVYILECKDGSWYTGYTTDVDRRIKKHASGKGAKYTR -----2111100011121110011122221122333455666665 GRGPFRLVATWAFPSKEEAMRWEYEVKHLSRRKKEQLVSLKGGPY 432111111111111111111000001111111111111222356 ENTTKLSTTLEHHHHHH 799999999-------- >Putative low molecular we; SWP:P39155; PDB:1ZGGA MDIIFVCTGNTCRSPMAEALFKSIAEREGLNVNVRSAGVFASPNG 000000000000000000000000000000000000000000000 KATPHAVEALFEKHIALNHVSSPLTEELMESADLVLAMTHQHKQI 000000000000000000000000000000000000000000000 IASQFGRYRDKVFTLKEYVTGSHGDVLDPFGGSIDIYKQTRDELE 000000000000000000000000000000000000000000000 ELLRQLAKQLKKDRR 000000000000111 >hypothetical protein HP12; SWP:O25839; PDB:1ZHCA MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQQNASDAE 210000000000000000000000000000000000011000000 VSHMKKQKLKLKDEIHSMIIEYREKQKSERA 0000000000000000000000000000111 >transcriptional regulator; SWP:O66551; PDB:1ZITA MKRVLVVDDEESITSSLSAILEEEGYHPDTAKTLREAEKKIKELF 100000000123211101100000000000000000000000000 FPVIVLDVWMPDGDGVNFIDFIKENSPDSVVIVITGHGSVDTAVK 000000000111110000000000000000000011221100000 AIKKGAYEFLEKPFSVERFLLTIKHAFEEYS 0000000000122210000000000000122 >Jingzhaotoxin-VII; SWP:NA; PDB:1ZJQA GCGGLMAGCDGKSTFCCSGYNCSPTWKWCVYARP 2110000011111110110000000000000013 >Foldase protein prsA; SWP:P24327; PDB:1ZK6A GSGKIRASHILVADKKTAEEVEKKLKKGEKFEDLAKEYSTDSSAS --1000000000000000000000000000000000000000000 KGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPVKTQYGYHIIKK 000000000011110000000000000000000000000000000 TEE 000 >Alpha-conotoxin PIA; SWP:P69658; PDB:1ZLCA RDPCCSNPVCTVHNPQIC 100000000000000001 >Anosmin 1; SWP:P23352; PDB:1ZLGA AAGPGAAAARRLDESLSAGSVQRARCASRCLSLQITRISAFFQHF 000000000000000000000000000000000000000000000 QNNGSLVWCQNHKQCSKCLEPCKESGDLRKHQCQSFCEPLFPKKS 000000000000000000000000000000000000000000000 YECLTSCEFLKYILLVKQGDCPAPEKASGFAAACVESCEVDNECS 000000000000000000000000000000000000000000000 GVKKCCSNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVK 000000000000000000000000000000000000000000000 WSSKFNISIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQTTDERV 000000000000000000000000000000000000000000000 QLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAP 000000000000000000000000000000000000000000000 ANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSS 000000000000000000000000000000000000000000000 KSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQT 000000000000000000000000000000000000000000000 RLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRP 000000000000000000000000000000000000000000000 LEVGAPFYQDGQLQVKVYWKKTEDPTVNRYHVRWFPEACAHNRTT 000000000000000000000000000000000000000000000 GSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKAEAVFF 000000000000000000000000000000000000000000000 TTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDV 000000000000000000000000000000000000000000000 NITGHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQ 000000000000000000000000000000000000000000000 SQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPATIKTFRTP 000000000000000000000000000000000000000000000 ELPPSSAHRSHLKHRHPHHYKPSPERYGKPIPNPLLGLDSTRTGH 000000000000000000000000000000000000000000000 HHHHH 00000 >YY1; SWP:P25490; PDB:1ZNM_ FQCTFCGKRFSLDFNLKTHVKIHTG -----00000000000000000001 >Ornithine decarboxylase a; SWP:P54370; PDB:1ZO0A ILYSDERLNVTEEPTSNDKTRVLSIQCTLTEAKQVTWRAVWNGGG 100011100000011344200000000012221100000000110 LYIELPAGPLPEGSKDSFAALLEFAEEQLRADHVFICFPKNREDR 000001112222111110000000000001110000001122211 AALLRTFSFLGFEIVRPGHPLVPKRPDACFMVYTLE 111111122211000123356432221100000112 >Presynaptic protein SAP97; SWP:Q62696; PDB:1ZOKA EYEEITLERGNSGLGFSIAGGTDNPHIGDDSSIFITKIITGGAAA 000000000000000000000000000000000000000000000 QDGRLRVNDCILRVNEADVRDVTHSKAVEALKEAGSIVRLYVKRR 000000000000000000000000000000000000000000000 KAF 000 >mini-collagen; SWP:Q00484; PDB:1ZPXA PCGSYCPSVCAPACAPVCCYP 111100001111000000012 >Zinc finger protein 593; SWP:O00488; PDB:1ZR9A GHHHHHHLEKAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDL -----------------------------------7654421211 PGGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQLSVEPYSQE 000000000000000000000000000000000000124579999 EAERAAGMGSYVPPRRLAVPTEVSTEVPEMDTST 999999999999---------------------- >E1B-55kDa-associated prot; SWP:NA; PDB:1ZRJA GSSGSSGMDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALS 976543210000000000000000000000000000000000001 GPSSG 35799 >E-2/E-2' protein; SWP:Q9ZFE7; PDB:1ZRRA SALTIFSVKDPQNSLWHSTNAEEIQQQLNAKGVRFERWQADRDLG 000000000000000000000000000000000000000000001 AAPTAETVIAAYQHAIDKLVAEKGYQSWDVISLRADNPQKEALRE 111100000000000000000000000000010001011000000 KFLNEHTHGEDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVP 000000000000000000000100000000000000000000000 AHTPHWFDMGSEPNFTAIRIFDNPEGWIAQFTGDDIASAYPRLA 00000000000000000000000000000000000000000001 >spinigerin; SWP:P82357; PDB:1ZRVA HVDKKVADKVLLLKQLRIMRLLTRL 4211000000000000000000011 >stomoxyn; SWP:Q8T9R8; PDB:1ZRXA RGFRKHFNKLVKKVKHTISETAHVAKDTAVIAGSGAAVVAAT 764443222112211111222222233333222333345567 >Hypothetical protein yqbG; SWP:P45923; PDB:1ZTSA MLLITPDELKSYSVFESVKTRPDELLKQDILEATADIILKVGHDF 989886774577675443456899867854664466557877679 SDAEYIPLPETVRLALLKLSQFYALINGDESIIKGYTTEKIGDYS 999999999997775345424665799999999999999999999 YTLGDGSSLQKPDVYALIKDYVKPADPDLEGIEAKVRMRSILEHH 999999999999999999999999988676668999999999999 HHHH 9999 >RNA binding protein ZFa; SWP:Q8AVN9; PDB:1ZU1A ADEFGNGDALDLPVGKDAVNSLIRENSHIFSDTQCKVCSAVLISE 999999999999999999999999999999999999899999999 SQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGE 999998788987899899999999999999999999999999999 DRSKCCPVCNMTFSSPVVAESHYIGKTHIKNLRLREQ 9999999999999999999999999999999999999 >Mitochondrial import rece; SWP:NA; PDB:1ZU2A GPLGSMDTETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGV 999876542100000000000000000000000000000000000 LLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAY 000000000000000000000000000000000000000000000 TSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTA 000000000000000000000000000000000000000000000 KAPQLHAEAYKQGLGGSHHHHHH 00000000000013689999999 >PHAGE 434 CRO PROTEIN; SWP:P03036; PDB:1ZUG_ MQTLSERLKKRRIALKMTQTELATKAGVKQQSIQLIEAGVTKRPR 110000000000000000000000000000000000000000000 FLFEIAMALNCDPVWLQYGTKRGKAA 00000000000000000001246789 >Ubiquitin; SWP:P61864; PDB:1ZW7A MQIFVKTLTGATITLEVESSDTIDNVKSKIQAAPGIPPDQQELIF 100000000000000000000000000001111110000000000 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGHHHHHH 0000000000000000000000000001112222345 >Zinc-responsive transcrip; SWP:P47043; PDB:1ZW8A DLKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWED 100000000000000000000000000011222221100000000 CDFLGDDTASIVNHINAQH 0000000000000000000 >Gamma crystallin S; SWP:O35486; PDB:1ZWMA SKTGGKISFYEDRNFQGRRYDCDCDCADFRSYLSRCNSIRVEGGT 431000000000000000000000000000000000000000000 WAVYERPNFSGHMYILPQGEYPEYQRWMGLNDRLGSCRAVHLSSG 000000000000000000000000000000000000000000000 GQAKIQVFEKGDFNGQMYETTEDCPSIMEQFHLREIHSCKVVEGT 000000000000000000000000000000000000000000000 WIFYELPNYRGRQYLLDKKEYRKPVDWGAASPAIQSFRRIVE 000000000000000000000000000000000000000000 >Major structural subunit; SWP:P33553; PDB:1ZWTA MEQSASDSNKSQNAISEVMSATSAINGLYIGQTSYSGLDSTILLN 642110000000000000000000000011111001100000000 TSAIPDNYKDTTNKKITNPFGGELNVGPANNNTAFGYYLTLTRLD 010000000000000000110000000000011100000000000 KAACVSLATLNLGTSAKGYGVNISGENNITSFGNSADQAAKSTAI 000000000001100000000000000000000000100000011 TPAEAATACKNTDSTNKVTYFMK 10000001011111000000001 >cGMP-dependent protein ki; SWP:Q13976; PDB:1ZXAA GSPGIPGSTSELEEDFAKILMLKEERIKELEKRLSEKEEEIQELK ----------------00000000000000000000000000000 RKLHKCQSVLPVPSTHIGPRTT 0000001--------------- >CalC; SWP:Q8KNF0; PDB:1ZXFA NYDPFVRHSVTVKADRKTAFKTFLEGFPEWWPNNFRTTKVGAPLG 101100000000000000000000000000000000001110100 VDKKGGRWYEIDEQGEEHTFGLIRKVDEPDTLVIGWRLNGFGRID 000000000000111110110000000000000000001121100 PDNSSEFTVTFVADGQKKTRVDVEHTHFDRMGTKHAKRVRNGMDK 111000000000001100000000010000111000000000001 GWPTILQSFQDKIDEEGAKK 00000000000000000112 >Immunoglobulin G binding; SWP:Q53759; PDB:1ZXGA MYYLVVNKQQNAFYEVLNMPNLNEDQRNAFIQSLKDDPSQSANVL 532101000000000000000000000000000000000000000 AEAQKLNDVQAPKA 00000000000135 >Immunoglobulin G binding; SWP:P19909; PDB:1ZXHA MYYLVVNKGQNAFYETLTKAVDAETARNAFIQSLKDDGVQGVWTY 100000000000000000000000000000000000000000000 DDATKTFTVQA 00000000000 >Methylosome subunit pICln; SWP:P35521; PDB:1ZYIA MHHHHHHLEMSFLKSFPPPGSAEGLRQQQPETEAVLNGKGLGTGT --------------------------1000000000000010000 LYIAESRLSWLDGSGLGFSLEYPTISLHAVSRDLNAYPREHLYVM 000011000000000000001221100001245565321000000 VNAKFGEESKESVAEEEDSDDDVEPIAEFRFVPSDKSALEAMFTA 001123457999999999998643000000000000000000000 MCECQALHPDPEDEDSDDYDGEEYDVEAHEQGQEND 0000000----------------------------- >Proto-oncogene tyrosine-p; SWP:P00519; PDB:1ZZPA GAMASTRVSLRKTRQPPERIASGAITKGVVLDSTEALCLAISRNS ---------------------211000000000000000000001 EQMASHSAVLEAGKNLYSFCVSYVDSIQQMRNKFAFREAINKLEN 111100000000000000000000000010000000000000000 NLRELQICPATAGSGPAATQDFSKLLSSVKEISDIVQRLE 0000000122344333221100000000000000000012 >Ferric-pseudobactin 358 r; SWP:P25184; PDB:2A02A SQEWTLDIPAQSMNSALQALAKQTDTQLLYSPEDIGGLRSSALKG 210000000000000000000000000000001101100000000 RHDLQSSLRILLQGTGLRYQIDGNTVTVTASAAAKDG 0000000000001100000000000000001346899 >Cysteine-rich secretory p; SWP:P16563; PDB:2A05A GSCASCPNNCENGLCTNSCDFEDLLSNCESLKTSAGCKHELLKTK 999999998999997543100000000000000000000000000 CQATCLCEDKIH 000000024468 >Der f 13; SWP:Q1M2P5; PDB:2A0AA MASIEGKYKLEKSEKFDEFLDKLGVGFMVKTAAKTLKPTFEVAIE 321000000000000000000000000000000000000000000 NDQYIFRSLSTFKNTEAKFKLGEEFEEDRADGKRVKTVIQKEGDN 110000000000000000010000000011000000000000100 KFVQTQFGDKEVKIIREFNGDEVVVTASCDGVTSVRTYKRI 00000000000000000000000000000000000000000 >Regulating synaptic membr; SWP:Q9JIS1; PDB:2A20A GSQEQKGDAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSL --9753210000000000001110000000000000000000001 RSNKVMWVCNLCRKQQE 12100000000000001 >V(D)J recombination activ; SWP:P21784; PDB:2A23A GPLGSPEFGYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGD 998766421000000110000010000001111000000000111 GHWVHAQCMDLEERTLIHLSEGSNKYYCNEHVQIARA 0000000000000000000001100000000111235 >Bacteriocin curvacin A; SWP:P0A311; PDB:2A2BA ARSYGNGVYCNNKKCWVNRGEATQSIIGGMISGWASGLAGM 99999999999999998542222335522211111112222 >Selenoprotein M; SWP:Q8VHC3; PDB:2A2PA MTNYRPDWNRLRGLARGRVETCGGCQLNRLKEVKAFVTEDIQLYH 432100000000000000000011121000000000000000000 NLVMKHLPGADPELVLLSRNYQELERIPLSQMTRDEINALVQELG 000000000000000000000000000000000000000000000 FYRKSAPEAQVPPEYLWAPAKPPEEASEHDDLEHHHHHH 000000011001110110011123557999999999999 >Protein E(sev)2B; SWP:Q08012; PDB:2A36A MEAIAKHDFSATADDELSFRKTQILKILNMEDDSNWYRAELDGKE 100000000000000000000000000000000000000000000 GLIPSNYIEMKNHD 00000000001235 >PROTEIN (DE NOVO THREE-HE; SWP:NA; PDB:2A3DA MGSWAEFKQRLAAIKTRLQALGGSEAELAAFEKEIAAFESELQAY 000000000000000000000000000000000000000000000 KGKGNPEVEALRKEAAAIRDELQAYRHN 0000000000000000000000000000 >U1 small nuclear ribonucl; SWP:P09012; PDB:2A3JA MKETAAAKFERQHMDSPDLGSTPPHTEPSQVVLITNINPEVPKEK ---------------------764321100000000000000000 LQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVE 000000000000000000000000010000000000000000000 AFQGYPFQGNPLVITFSETPQSQVAEDGSLEHHHHHH 000000000000000001111221234---------- >Myocyte Nuclear Factor; SWP:P42128; PDB:2A3SA ESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADK 322211000000000000011000000000000000010111111 GWQNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQ 100000000000000000123467776421000000000000000 AFRKRRQRGVS 00112469999 >Selenoprotein Sep15; SWP:Q9VVJ7; PDB:2A4HA MASHHHHHHLDQQPAAQRTYAKAILEVCTCKFRAYPQIQAFIQSG 999999999999753210000000000000000000000000000 RPAKFPNLQIKYVRGLDPVVKLLDASGKVQETLSITKWNTDTVEE 000000000000000000000000010000000000000000000 FFETHLAKDGAGKNSYSVVEDADGDDDEDYLRTNRI 000000012468999999999999999999999999 >C4b-binding protein; SWP:P04003; PDB:2A55A MNCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQ 111111111110111222232211111111100001110112211 TLTCNSDGEWVYNTFCIYKRCRHPGELRNGQVEIKTDLSFGSQIE 000000110001111010011122222222222222211111222 FSCSEGFFLIGSTTSRCEVQDRGVGWSHPLPQCEILEHHHHHH 2222332222222211111122212222222222334567899 >Huntingtin interacting pr; SWP:Q9BYW2; PDB:2A7OA GSHMTAEADTSSELAKKSKEVFRKEMSQFIVQCLNPYRKPDCKVG ---------000000000000000000000000000000000000 RITTTEDFKHLARKLTHGVMNKELKYCKNPEDLECNENVKHKTKE 000000000000000000000000000000000000000000000 YIKKYMQKFGAVYKPKEDTELE 0000000000000000000--- >Hypothetical protein Rv23; SWP:P64983; PDB:2A7YA GSHMHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWL ---110000000001344432100000000011111000000000 VNGHETTVYPGSDAVVVTATEHAEAEKRAAARAGHAAT 00000000001110000000000000000000001224 >Filamin A; SWP:P21333; PDB:2AAVA GAMVVNCGHVTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIE ----76531000000000000000000000011222321000000 GPSKAEISCTDNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPF 000000000112211000000000000000000000000010000 TARVTGDD 00000012 >ZNF29; SWP:NA; PDB:2AB3A MVYVCHFENCGRSFNDRRKLNRHKKIHTG 00000000000000000000000000000 >hypothetical protein TA07; SWP:Q9HK62; PDB:2ABYA MGTSHHHHHHSSGRENLYFQSHMQKGLEIAFQTINGLDESLVQAL ----------------------43110000000112100000000 AGVTASDFPDLDIKYNIFLVDLYGQKYFRILFQSKKLSELHPEER 000000012111000000000000000000000001101100000 KKVREKFDENSRMQYSELMTKYHDLKKQGKIKDRPVKEVHEEYDL 000000000000000000000000000111000000000001110 WEDPIWQYIGS 000000011-- >Alpha-1-syntrophin; SWP:Q61234; PDB:2ADZA ASGRRAPRTGLLELRCGAGSGAGGERWQRVLLSLAEDALTVSPAD 975310000000000123566532110000000000000000001 GEPGPEPEPAQLNGAAEPGAAPPQLPEALLLQREVSPYFKNSAGG 246799999999999999999998644656899999999999999 TSVGWDSPPASPLQRQPSSPGPQPRNLSEAKHVSLKMAYVSRRCT 999999999999999999997654321110000010000000001 PTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIGT 1212110000000000000000000000000000000000002 >protein Asl1650; SWP:NA; PDB:2AFDA GSHMKTIQPASVEDIQSWLIDQFAQQLDVDPDDIDMEESFDNYDL 532110000000000000000000000000000000000000000 NSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGELYL 0000000000000000000000000000000000000000000 >gene rich cluster, C9 gen; SWP:O88838; PDB:2AFJA GSSARQSTPTSQALYSDFSPPEGLEELLSAPPPDLVAQRHHGWNP 999999999999999998643322122122221111111111112 KDCSENIDVKEGGLCFERRPVAQSTDGVRGKRGYSRGLHAWEISW 221111110112211111122323221111112111110000011 PLEQRGTHAVVGVATALAPLQADHYAALLGSNSESWGWDIGRGKL 223455542101001122346678999876321110101123345 YHQSKGLEAPQYPAGPQGEQLVVPERLLVVLDMEEGTLGYSIGGT 678888878999986654354212100000000110000001221 YLGPAFRGLKGRTLYPSVSAVWGQCQVRIRYMGERRVEETRRIHR 111110000000000000111122211000111223468899999 D 9 >PROTEIN (SEA RAVEN TYPE I; SWP:P05140; PDB:2AFPA QRAGPNCPAGWQPLGDRCIYYETTAMTWALAETNCMKLGGHLASI 998542122211111100000000000000000000001000011 HSQEEHSFIQTLNAGVVWIGGSACLQAGAWTWSDGTPMNFRSWCS 110000000001110000111111223332211122322222223 TKPDDVLAACCMQMTAAADQCWDDLPCPASHKSVCAMTF 222221111000011233221111010000000000001 >Machado-Joseph disease pr; SWP:P54252; PDB:2AGAA GPLGSMESIFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQL 111000000000112210000000000001100000000000000 DEEERMRMAEGGVTSEDYRTFLQQPSGNMDDSGFFSIQVISNALK 000000000001000000000000001000110000000000000 VWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQW 000000000000000000000001000000001000000000000 FNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLPDCEAD 000000000000000000000000000000000000000000000 QLLQMIRVQQ 0001123567 >Poly(beta-D-mannuronate); SWP:Q44493; PDB:2AGMA GSDGEPLVGGDTDDQLQGGSGADRLDGGAGDDILDGGAGRDRLSG 642110000111000001111100000000000000010000000 GAGADTFVFSAREDSYRTDTAVFNDLILDFEASEDRIDLSALGFS 000000000112111001111000000000000000001111212 GLGDGYGGTLLLKTNAEGTRTYLKSFEADAEGRRFEVALDGDHTG 222111211100000111100000011112211010000011222 DLSAANVVFAATGTTTELEVLGDSGTQAGAIV 11111111223679999999999999999999 >RNA polymerase sigma fact; SWP:O66858; PDB:2AHQA TYSLRTFFVRESAEGLTQGELMKLIKEIVENEDKRKPYSDQEIAN 999999999975321100000000000000001110000000000 ILKEKGFKVARRTVAKYREMLGIPSSRERRI 0000111000000000000001--------- >Bowman-Birk type protease; SWP:Q8W4Y8; PDB:2AIHA GDDVKSACCDTCLCTRSQPPTCRCVDVRESCHSACDKCVCAYSNP 764321111100000111110000000011111111000000011 PQCQCYDTHKFCYKACHNSEIE 1000000111111111245578 >fragment of Nucleoporin N; SWP:Q02630; PDB:2AIVA GPNENYYISPSLDTLSSYSLLQLRKVPHLVVGHKSYGKIEFLEPV 864211101100100111111111111000011111000001111 DLAGIPLTSLGGVIITFEPKTCIIYANLPNRPKRGEGINVRARIT 111221133333321111111112223344444432211111000 CFNCYPVDKSTRKPIKDPNHQLVKRHIERLKKNPNSKFESYDADS 012223345665433444322111110111111211101001111 GTYVFIVNHAAEQT 10000112234679 >Probable cadmium-transpor; SWP:Q60048; PDB:2AJ0A MAEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITV 421000000000000000000000000000000000011100000 TGEASIQQVEQAGAFEHLKIIPEKEA 00000000000000000000001135 >telomere repeat-binding p; SWP:Q9LTI6; PDB:2AJEA GSHMLEDPQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFE --------8864321000000000000000000000000000000 DADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLNRVLNAH 000000000000000000000001122233211000000000000 GYWTQQQMQQLQQNV 000000111244454 >Nonstructural protein 5A; SWP:Q96662; PDB:2AJJA SGNYVLDLIYSLHKQINRGLKKIVLGWA 6310000000000000000000000124 >Alpha-conotoxin MII; SWP:P56636; PDB:2AJWA GCCSNPVCHLEHSNLCGGAAGG 0000000000000000123211 >Alpha-conotoxin MII; SWP:P56636; PDB:2AK0A GCCSNPVCHLEHSNLCGAGGAAG 00000000000000001332321 >phnA-like protein; SWP:Q6N1A7; PDB:2AKKA MSIEVRDCNGALLADGDNVSLIKDLKLKGSSTVLKRGTMIRGIRL 210000000000000000000000000122000000000000000 TDSEDEIEGRTDKIKGLVLRTEFLKKAGS 00000000000000000000000000024 >phnA-like protein pa0128; SWP:NA; PDB:2AKLA MGSSHHHHHHSSGRENLYFQGHMVSTLPPCPQCNSEYTYEDGALL ----------------------99999999999999987999864 VCPECAHEWSPNEAATASDDGKVIKDSVGNVLQDGDTITVIKDLK 568998654578889999999876666777666654433355655 VKGSSLVVKVGTKVKNIRLVDGDHDIDCKIDGIGAMKLKSEFVRK 556665555543333444567776533233564322234565444 VGS 566 >TUG long isoform; SWP:Q8VBT9; PDB:2AL3A MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDF ---------000000000000000000000000000000000000 NPSEYDLKFQRTVLDLSLQWRFANLPNNAKLEMVPVSRSREGPEN 0000000000000000000000000000000000000013----- >Protein disulfide-isomera; SWP:Q5RDG4; PDB:2ALBA SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEA 100000000000001111111000000000112111100000000 AATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGA 000000000000000000000000000001000000000000010 YDGPRTADGIVSHLKKQAGPASV 01110000000000000013467 >Caltractin; SWP:P05434; PDB:2AMIA GSMSYKAKTVVSARRDQKKGRVGLTEEQKQEIREAFDLFDTDGSG --------------------4310000000000000000000100 TIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 000000000000000000000000000000001200000000000 MMTAKM 000001 >cathelicidin; SWP:Q2IAM1; PDB:2AMNA RVKRVWPLVIRTVIAGYNLYRAIKKK 86532110000000000010000012 >Hypothetical protein NE21; SWP:Q82SY3; PDB:2AMWA MQHLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNV 000000000000000000000000000000000000000000000 ITALEEYFDFSVDDDEISAQTFETLGSLALFVEHKLSH 00000000000000000000000000000000000013 >Bombinin H2; SWP:P82285; PDB:2AP7A IIGPVLGLVGSALGGLLKKI 43100000000000000000 >Protein HI1723; SWP:P45344; PDB:2APNA MIDDMAVPLTFTDAAANKVKSLISEEENTDLKLRVYITGGGCSGF 644410000000000000000000000000000000000121100 QYGFTFDEKVNDGDLTIEKSGVQLVIDPMSLQYLIGGTVDYTEGL 000000000001000000000000000000000000000000011 EGSRFTVNNPNATSTCGCGSSFSI 110000000101235899999999 >H/ACA ribonucleoprotein c; SWP:Q6Q547; PDB:2AQAA HLMYTLGPDGKRIYTLKKVTESGEITKSAHPARFSPDDKYSRQRV 998667999987677899999999999999999999877766667 TLKKRFGLVPGQHHHHHH 799999999999------ >WILSON DISEASE ATPASE; SWP:P35670; PDB:2ARFA AGHMVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSEHPLGVAVT 432211000000001012110000000000000011111110000 KYCKEELGTETLGYCTDFQAVPGCGIGCKVSNVEGILAHSERPLS 001001111111100000000000000000000111123455678 APASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVS 999999999997665432110000000000000010101111100 DAMTDHEMKGQTAILVAIDGVLCGMIAIAD 000000000000000000000000000001 >potential NAD-reducing hy; SWP:Q46505; PDB:2AUVA MVPKGKYPISVCMGTACFVKGADKVVHAFKEQLKIDIGDVTPDGR 997531000000001100010000000000000001100011110 FSIDTLRCVGGCALAPIVMVGEKVYGNVTPGQVKKILAEY 1010110111111111100001000111111000000000 >Acyl carrier protein I, c; SWP:P07854; PDB:2AVAA AKKETIDKVSDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIV 000000000000000000000000000000012343332000000 MNLEEEFGINVDEDKAQDISTIQQAADVIEGLLEKKA 0000000000000000000000000000000000136 >Myosin-binding protein C,; SWP:Q14896; PDB:2AVGA MHHHHHHSSMDDPIGLFVMRPQDGEVTVGGSITFSARVAGASLLK ----------00000000000000000000000000000001000 PPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQ 000000000000000000000000000000000000000000000 PAFTGGYRCEVSTKDKFDCSNFNLTVHEAM 000000000000000000000000000014 >Regulatory protein sdiA; SWP:P07026; PDB:2AVXA MSDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLC 532110000000000000000000000000000000000000000 VRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQ 000111111000000000000000000000000000000000000 GHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPERALGFLSF 000000000000000000000000000000000001110000000 SRCSAREIPILSDELQLKMQLLVRESLMALMRLNDE 000000000000000000000000000000000012 >Hypothetical 11.0 kDa pro; SWP:P40554; PDB:2AX5A MVNVKVEFLGGLDAIFGKQRVHKIKMDKEDPVTVGDLIDHIVSTM 100000000000000000000000000100000000000000000 INNPNDVSIFIEDDSIRPGIITLINDTDWELEGEKDYILEDGDII 000000000000110000000000000000001000000000000 SFTSTLHGGLEHHHHHH 000012479-------- >discrepin; SWP:P84777; PDB:2AXKA IDTNVKCSGSSKCVKICIDRYNTRGAKCINGRCTCYP 0000000100000000000000000000000000000 >Werner syndrome; SWP:Q14191; PDB:2AXLA MDDSEDTSWDFGPQAFKLLSAVDILGEKFGIGLPILFLRGSNSQR 554321000000000110000000000000000000000000000 LADQYRRHSLFGTGKDQTESWWKAFSRQLITEGFLVEVSRYNKFM 000011100000000000000000000000000000000000100 KICALTKKGRNWLHKANTESQSLILQANEELCPKKLLLPSSKTVS 000000000000000001000000000000112233455678999 SGTKEHCYN 999999999 >DNA polymerase III subuni; SWP:P06710; PDB:2AYAA MKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALN 999866532211110000100110000000000000000000000 AWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELT 000001110000000010000000000000000000001110000 IVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQ 00111121100000111111000000111233455799 >50S ribosomal protein L40; SWP:Q980V5; PDB:2AYJA MPLTDPAKLQIVQQRVFLKKVCRKCGALNPIRATKCRRCHSTNLR 999986431001221110000000000000000000000010000 LKKKELPTKKG 00013467899 >Sensor kinase protein rcs; SWP:P14376; PDB:2AYXA MGGSGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQE 999999999999999999999999999999999999999999999 PTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSV 999999999999999999999999999999999999999999999 AAPHELPALLARIYLIEMESDDPANALPSTDKAVSDNDDMMILVV 999999999999999999999999999999999999999999999 DDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSD 999999999999999999999999999999999999999888999 VNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMD 999999999999999999999888899999999999999999988 SCLSKPVTLDVIKQTLTLYAERVRKSRDS 99999999999999888888999999999 >Picornain 3C (Protease 3C; SWP:P03303; PDB:2B0FA GPNTEFALSLLRKNIMTITTSKGEFTGLGIHDRVCVIPTHAQPGD -----9--------------------------------------- DVLVNGQKIRVKDKYKLVDPENINLELTVLTLDRNEKFRDIRGFI --------------------------------------------- SEDLEGVDATLVVHSNNFTNTILEVGPVTMAGLINLSSTPTNRMI --------------------------------------------- RYDYATKTGQCGGVLCATGKIFGIHVGGNGRQGFSAQLKKQYFVE --------------------------------------------- KQ -- >Talin-1; SWP:P26039; PDB:2B0HA GIDPFTMGDPEGSFVDYQTTMVRTAKAIAVTVQEMVTKSNTSPEE 999999864321000000000000000000000000000000000 LGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHRVQELGHG 000000000000000000000000000000000000000000000 CSALVTKAGALQCSPSDVYTKKELIECARRVSEKVSHVLAALQAG 000000000000000000000000000000000000000000001 NR 23 >Calmodulin-like protein 5; SWP:Q9NZT1; PDB:2B1UA ARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELD 311100000000000122211000000000000011001000000 AMIREADVDQDGRVNYEEFARMLAQE 00000000111100000000000112 >kalata B8; SWP:NA; PDB:2B38A CGETCLLGTCYTTGCTCNKYRVCTKDGSVLN 1100000000000000000000000222221 >Hypothetical protein ybiA; SWP:P30176; PDB:2B3WA MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWP 421112211111110000011112110000000000000000000 TSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRDRSKPLRKNWE 000000000000010000000000000000000111111101000 SVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGD 000000000000000000000000000000000001111111001 GGHGKGKNRLGYLLMELREQLAIEKLEHHHHHH 112111000000000000000000111234679 >Gastric inhibitory polype; SWP:P09681; PDB:2B4NA YAEGTFISDYSIAMDKIHQQDFVNWLLAQKGKKNDWKHNITQ 999999753110000000000000000011346899999999 >Polyphemusin-1; SWP:NA; PDB:2B5KA RRWCFRVCYRGRFCYRKCR 3110000000000000012 >YkuV protein; SWP:NA; PDB:2B5XA MKLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCK 100000000000000000000000000000000000000000000 EAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDI 000000000000000000000000000000000000000000000 TQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKM 000000000000000000000000000000000000000010000 LEKRVNRVLAETE 0000000000000 >defensin; SWP:NA; PDB:2B68A GFGCPGNQLKCNNHCKSISCRAGYCDAATLWLRCTCTDCNGKK 1000000000000000000000000000000000000000124 >Pre-mRNA processing prote; SWP:NA; PDB:2B7EA GAMEAEKEFITMLKENQVDSTWSFSRIISELGTRDPRYWMVDDDP 110000000000000000000000000000000000000000000 LWKKEMFEKYLSNR 00000000000000 >Double-stranded RNA-speci; SWP:NA; PDB:2B7TA PGPVLPKNALMQLNEIKPGLQYMLLSQTGPVHAPLFVMSVEVNGQ 987530000000000000000000000012211000000000000 VFEGSGPTKKKAKLHAAEKALRSFVQFP 0000000000000000000000000134 >Double-stranded RNA-speci; SWP:NA; PDB:2B7VA PSGKNPVMILNELRPGLKYDFLSESGESHAKSFVMSVVVDGQFFE 753200000000001000000000123432100000000000000 GSGRNKKLAKARAAQSALATVFNLHL 00000000000000000000000012 >Cytoplasmic protein NCK2; SWP:NA; PDB:2B86A MTEEVIVIAKWDYTAQQDQELDIKKNERLWLLDDSKTWWRVRNAA 321000000000000000000000000000000000000000000 NRTGYVPSNYVERKLEHHHHHH 00000000000001-------- >ZTaq affibody; SWP:NA; PDB:2B87A VDNKFNKELGWATWEIFNLPNLNGVQVKAFIDSLRDDPSQSANLL 64310000---0--00--00000--00-000-0000000000000 AEAKKLNDAQAPK 0000000000001 >anti-ZTaq affibody; SWP:NA; PDB:2B87B VDNKFNKERVIAIGEIMRLPNLNSLQVVAFINSLRDDPSQSANLL 653100000000000000000000000000000000000000000 AEAKKLNDAQAPK 0000000000001 >Dynein light chain 2A; SWP:NA; PDB:2B95A MGHHHHHHSHMAEVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMD ----------00000000000000000000000000000000000 NPTTTQYASLMHSFILKARSTVRDIDPQNDLTFLRIRSKKNEIMV 000000000000000000000000000000000000000000000 APDKDYFLIVIQNPTE 0000000000000001 >Antimicrobial peptide LCI; SWP:NA; PDB:2B9KA AIKLVQSPNGNFAASFVLDGTKWIFKSKYYDSSKGYWVGIYEVWD 000000000000000000000000000000000000000000000 RK 01 >NikA; SWP:NA; PDB:2BA3A SDSAVRKKSEVRQKTVVRTLRFSPVEDETIRKKAEDSGLTVSAYI 999999997531100000000000000000000000000000000 RNAALN 000000 >Fibrinogen alpha chain; SWP:NA; PDB:2BAFA MGTFREEGSVSSGTKQEFHTGKLVTTKGDKELLIDNEKVTSGHTT 999999999999999999999999999999999999999998765 TTRRSCSKVITKTVTNADGRTETTKEVVKSEDGSDCGDADFDWHH 321011000000000011100000000002343433456799999 TFPSRGNLDDFFHRDKDDFFTRSSHEFDGRTGLAPEFAALGESGS 999999999999999999999999999999999999999999999 SSSKTSTHSKQFVSSSTTVNRGGSAIESKHF 9999999999999999999999999999999 >Genome polyprotein; SWP:NA; PDB:2BAIA MATTMEQEICAHSMTFEECPKCSALQYRNGFY 98776653210112221100000012244579 >Genome linked protein VPg; SWP:NA; PDB:2BBLA GAYTGLPNKKPNVPTIRTAKVQ 1000111111100000000000 >Thrombospondin-related an; SWP:NA; PDB:2BBXA GSASCGVWDEWSPCSVTCGKGTRSRKREILHEGCTSEIQEQCEEE 632100000000000011100000000000011000000000111 RCPP 1234 >ENDO-B1,4-MANNANASE 5C; SWP:NA; PDB:2BGOA MAVPEGNSWTYTAASASITAPAQLVGNVGELQGAGSAVIWNVDVP -------10000000000000000010000000000000000000 VTGEYRINLTWSSPYSSKVNTLVMDGTALSYAFAEATVPVTYVQT 000000000000000000000000000000000000000000000 KTLSAGNHSFGVRVGSSDWGYMNVHSLKLELLGGLTIRSPANLEH 000000000000000001000000000000013------------ HHHHH ----- >PHYTOTOXIC PROTEIN PCF; SWP:NA; PDB:2BICA EDPLYCQAIGCPTLYSEANLAVSKECRDQGKLGDDFHRCCEEQCG 321100111100001000000000000012221110000000112 STTPASA 3579999 >PROTEIN (BID); SWP:NA; PDB:2BIDA GSMDCEVNNGSSLRDECITNLLVFGFLQSCSDNSFRRELDALGHE 999999999985420000000000000000001000000000000 LPVLAPQWEGYDELQTDGNRSSHSRLGRIEADSESQEDIIRNIAR 113556678999999999999999999864322100000000000 HLAQVGDSMDRSIPPGLVNGLALQLRNTSRSEEDRNRDLATALEQ 000000000001122100000000000101000000000000000 LLQAYPRDMEKEKTMLVLALLLAKKVASHTPSLLRDVFHTTVNFI 000001111000000000000000000000000000000000000 NQNLRTYVRSLARNGMD 00000000000000002 >FRAGILE X MENTAL RETARDAT; SWP:NA; PDB:2BKDN MEELVVEVRGSNGAFYKAFVKDVEDSITVAFENNWQPDRQIPFDV -----1--------------------------2----------11 RFPPPVGYNKDINESDEVEVYSRANEKEPCCWWLAKVRMIKGEFY 123457654322222111112222345777542211111223221 VIEYAACDATYNEIVTIERLRSVNPNKPATKDTFKIKLDVP 1111234443221112222112222211223323------- >PENTON PROTEIN; SWP:P03276; PDB:2BLDA TGGRNSIRYSELAPLFDTTRVYLVDNKSTDVASLNYQNDHSNFLT ---000000000000000000000000000000000000000000 TVIQNNDYSPGEASTQTINLDDRSHWGGDLKTILHTNMPNVNEFM 000000000000000000000000000000000000000000000 FTNKFKARVMVSRSLTKDKQVELKYEWVEFTLPEGNYSETMTIDL 000000000000000000000000000000000000000000000 MNNAIVEHYLKVGRQNGVLESDIGVKFDTRNFRLGFDPVTGLVMP 000000000000000000000000000000000000000000000 GVYTNEAFHPDIILLPGCGVDFTHSRLSNLLGIRKRQPFQEGFRI 000000000000000000000000000000000000000000000 TYDDLEGGNIPALLDVDAYQASLKDDTEQGGDGAGGGNNSGSGAE 00000000000000000000000---------------------- ENSNAAAAAMQPVEDMNDHAIRGDTFATRAEEKRAEAEAAAEAAA --------------------------------------------- PAAQPEVEKPQKKPVIKPLTEDSKKRSYNLISNDSTFTQYRSWYL -----------0000000000000000000000000000000000 AYNYGDPQTGIRSWTLLCTPDVTCGSEQVYWSLPDMMQDPVTFRS 000000000000000000000000000000000000000000000 TSQISNFPVVGAELLPVHSKSFYNDQAVYSQLIRQFTSLTHVFNR 000000000000000000000000000000000000000000000 FPENQILARPPAPTITTVSENVPALTDHGTLPLRNSIGGVQRVTI 000000000000000000000000000000000000000000000 TDARRRTCPYVYKALGIVSPRVLSSRTF 00000000000000000000000000-- >TOXIN BMTX2; SWP:NA; PDB:2BMT_ FTNVSCSASSQCWPVCKKLFGTYRGKCMNSKCRCYS 000000000000000000000000000000000001 >CELL DIVISION ACTIVATOR C; SWP:P0AE62; PDB:2BN8A MRLVKPVMKKPLRQQNRQIISYVPRTEPAPPEHAIKMDSFRDVWM --------------------0000000000000000000000000 LRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE 000000000000000000000000000000000000000000 >ATP SYNTHASE OLIGOMYCIN S; SWP:NA; PDB:2BO5A FAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQI 999997654321100000000000000000000000000000000 LKEPKMAASLLNPYVKRSVKVKSLSDMTAKEKFSPLTSNLINLLA 000010010000111011000000000000000000000000000 ENGRLTNTPAVISAFSTMMSVHRGEVPCTV 011000000000000000000001123467 >MALES-ABSENT ON THE FIRST; SWP:NA; PDB:2BUDA GSHMDPLMQKIDISENPDKIYFIRREDGTVHRGQVLQSRTTENAA 986444432111010000000000000000000000000111111 APDEYYVHYVGLNRRLDGWVGRHRISDNADDLGGITVLPAPPLAP 110000000000000000000000000000000111235789999 DQ 99 >MICRONEMAL PROTEIN 1; SWP:NA; PDB:2BVBA KTEIHGDSTKATLEEGQQLTLTFISTKLDVAVGSCHSLVANFLDG 000000000000000000000000000000000000000000000 FLKFQTGSNSAFDVVEVEEPAGPAVLTIGLGHKGRLAVVLDYTRL 000000000000000000000000000000000000000000000 NAALGSAAYVVEDSGCSSSEEVSFQGVGSGATLVVTTLGESPTAV 000000000000000000000000000000000000000000000 SA 00 >BYPASS OF FORESPORE C; SWP:NA; PDB:2BW2A AEVEHYEPLQVHVQLEKVYLDGDVSIEHKHEKVFSMDDFWAAYAG 754321100000000111111111110000000000100000000 WTLVEQKKGYVLFRKQMDDISPLSKVNGYIGVSDNGVISTFHGRP 001111110000001111111111111100001111000001111 EPASEPIQSFFQIDLERLESHMQKNLLKGIPFRTKAEFEDVIEHM 111111111111111111211111000100111000000000111 KTYSG 11112 >PHOSPHOLIPASE C, EPSILON; SWP:NA; PDB:2BYEA GEERKCLQTHRVTVHGVPGPEPFTVFTINGGTKAKQLLQQILTNE 987643210000000001110000000000100000000000012 QDIKPVTTDYFLMEEKYFISKEKNECRKQPFQRAIGPEEEIMQIL 221111000000000123344465655422100000000000000 SSWFPEEGYMGRIVLKTQQE 01123454211000000011 >CONSERVED DOMAIN PROTEIN; SWP:NA; PDB:2BZBA MEMGQLKNKIENKKKELIQLVARHGLDHDKVLLFSRDLDKLINKF 210000000000000000000000000000000000000000000 MNVKDKVHKLEHHHHHH 00134678999999999 >CONSERVED DOMAIN PROTEIN; SWP:NA; PDB:2C0SA MNVTKLNDRIEAKKKELIYLVEKYGFTHHKVISFSQELDRLLNLL 211000000000000000000000011000000000000000000 IELKTKKKRYSLLEHHHHH 0001112346667999999 >INHIBITOR OF CYSTEINE PEP; SWP:NA; PDB:2C34A GSHMIAPLSVKDNDKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFV 999997654321000000000000000000001101000000000 GKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKPRKRGHHT 001100000000000000124678876420000000000000000 LELVYTRPFEGIKPENERYTLHLNVK 00000000000000000000000000 >PROTEIN P6; SWP:NA; PDB:2C55A LQSRPEPTAPPEESFRFGEETTTPSQKQEPIDKELYPLASLRSLF 000000000000000000000000000000000000000000000 GSDPSSQ 0000000 >SET DOMAIN PROTEIN 2; SWP:NA; PDB:2C5ZA GAMGKTVSQSQRLEHNWNKFFASFVPNLIKKNPQSKQFDHENIKQ ------100000000000000000000000000000000000000 CAKDIVKILTTKELKKDSSRAPPDDLTKGKRHKVKEFINSYMDKI 000000000000000000000000000000000000000000000 ILKKKQKKALGLSS 001111122----- >UBIQUITIN-PROTEIN LIGASE; SWP:NA; PDB:2C6AA SFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDK 999754210000000000000000000000000000000112346 G 8 >RETINOBLASTOMA-BINDING PR; SWP:NA; PDB:2C7HA GPLGSMSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLK 764320000000000000000000000000000000000000000 AADCDLQITNAQTKEEYTDDNALIPKNSSVIVRRIPIGGVK 00000000000000000000000000000000000001357 >INNER NUCLEAR MEMBRANE PR; SWP:Q9Y2U8; PDB:2CH0A GSPEFRWTKEEEETRQMYDMVVKIIDVLRSHNEACQENKDLQPYM 999987654333213221000000000000001111111111000 PIPHVRDSLIQPHDRKKMKKVWDRAVDFLAANESRVRTETRRIGG 000001100011110000000000001101111110000000111 ADFLVWRWIQPSASCDKILVIPSKVWQGQAFHLDRRLERPHRD 1000000011223578999999999999999999999999999 >BASIC FIBROBLAST GROWTH F; SWP:P16092; PDB:2CKNA PTLPEQAQPWGVPVEVESLLVHPGDLLQLRCRLRDDVQSINWLRD 221312453222210000000000000000000011100000000 GVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPSGSDTTYF 000011220000000000000000000000000000111000000 SVNVS 00000 >NEDD9 interacting protein; SWP:Q8TDZ2; PDB:2CO8A GSSGSSGQHQEAGAGDLCALCGEHLYVLERLCVNGHFFHRSCFRC 999999865443221100000111111110000000000000000 HTCEATLWPGGYEQHPGDGHFYCLQHLPQTDSGPSSG 0000000000000000000000000000002357899 >thymus high mobility grou; SWP:Q66JW3; PDB:2CO9A GSSGSSGKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATF 999999997654432100100000000000000000000000010 GEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLV 000000000000000000000000000000000000000000111 SKSYTDSGPSSG 246899999999 >Protein kinase C, D2 type; SWP:Q9BZL6; PDB:2COAA GSSGSSGTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNTTN 976542000000000000000000000000000000000000001 RYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTANATYFVGE 000000000000000000000000110000000000000000000 MPGGTPGGPSGQGAEAARGWETAIRQALMSGPSSG 01134555654210000000000000000013568 >LCoR protein; SWP:Q96JN0; PDB:2COBA GSSGSSGRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHS 999999997542000000000000000000000000000000000 TLEYKVKERLGTLKNPPKKKMKLMR 0000000000001245899999999 >FYVE, RhoGEF and PH domai; SWP:Q5JSP0; PDB:2COCA GSSGSSGSLLCGPLRLSESGETWSEVWAAIPMSDPQVLHLQGGSQ 976432100000000000000000000000000000000001122 DGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAKQSWYLSASS 210000000000000000011110000000000000000000000 AELQQQWLETLSTAAHSGPSSG 0000000000000001235689 >Centaurin-delta 1; SWP:Q8WZ64; PDB:2CODA GSSGSSGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKE 754321100000000001234331000000000000000001233 MYSKGIIPLSAISTVRVQGDNKFEVVTTQRTFVFRVEKEEERNDW 332100000000000000010000000010000000000000000 ISILLNALKSQSLTSQSQASGPSSG 0000000000012468999999999 >deoxynucleotidyltransfera; SWP:P04053; PDB:2COEA GSSGSSGTGALMASSPQDIKFQDLVVFILEKKMGTTRRALLMELA 999999999999876432101100000000000000000000000 RRKGFRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPEL 000000000000000000000000000000000000000000000 LDVSWLIECIGAGKPVEMTGKHQLSGPSSG 000000000000000000100000124457 >Protein KIAA1914; SWP:Q8N4X5; PDB:2COFA GSSGSSGLETSSYLNVLVNSQWKSRWCSVRDNHLHFYQDRNRSKV 876543211000000000000000000000000000001111100 AQQPLSLVGCEVVPDPSPDHLYSFRILHKGEELAKLEAKSSEEMG 000000000000000000000000000000000000000000000 HWLGLLLSESGSGPSSG 00000000001345679 >Poly [ADP-ribose] polymer; SWP:P09874; PDB:2COKA GSSGSSGDKPLSNMKILTLGKLSRNKDEVKAMIEKLGGKLTGTAN 765442210000000000000000000000000000000000000 KASLCISTKKEVEKMNKKMEEVKEANIRVVSEDFLQDVSASTKSL 000000000000000000000000000000000000000000000 QELFLAHILSSWGAEVKSGPSSG 00000000000001357999999 >nin one binding protein; SWP:Q8BW10; PDB:2CONA GSSGSSGVREARSYILRCHGCFKTTSDMNRVFCGHCGNKTLKKVS 888887543210000000000000000000000000000000000 VTINDDGTLHMHFSRNPKVLNPRGLRYSSGPSSG 0001111110011234556789999999999999 >Lipoamide acyltransferase; SWP:P11182; PDB:2COOA GSSGSSGHQEIKGRKTLATPAVRRLAMENNIKLSEVVGSGKDGRI 999999998765321000000000000000000000000010000 LKEDILNYLEKQTGAILPPSGPSSG 0000000000000235679999999 >Acyl-Coenzyme A binding d; SWP:Q9BR61; PDB:2COPA GSSGSSGLAELFEKAAAHLQGLIQVASREQLLYLYARYKQVKVGN 976431000000000000000000000000000000000000000 CNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEYIAVVKKLDPG 000000000000000000000000000000000000000000000 WNPQIPEKKGKEASGPSSG 0001234568999999999 >PINCH protein; SWP:P48059; PDB:2CORA GSSGSSGEKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCA 999999999753210000000000000000000000000000000 NCGKELTADARELKGELYCLPCHDKMGVSGPSSG 0000000000000000000000000001246789 >Serine/threonine protein; SWP:Q7TSJ6; PDB:2COSA GSSGSSGVNRQMLQELVNAGCDQEMAGRALKQTGSRSIEAALEYI 866532100000000000000000000000000001000000000 SKMSGPSSG 000124689 >Zinc finger protein 435; SWP:NA; PDB:2COTA GSSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEK 999999999876654544344666543232221111111233222 PYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG 32346665321122211112223444446799 >ECT2 protein; SWP:NA; PDB:2COUA GSSGSSGFKVPPFQDCILSFLGFSDEEKHSMEEMTEMQGGSYLPV 998754210000000000000000000000000000000000000 GDERCTHLIVEENTVKDLPFEPSKKLFVVKQEWFWGSIQMDARAG 000000000000000000000000000000000000000000000 ETMYLYEKANTPESGPSSG 0000000124699999999 >Kinesin-like protein KIF1; SWP:NA; PDB:2COWA GSSGSSGQALASDSEEADEVPEWLREGEFVTVGAHKTGVVRYVGP 999999999999986321000000000000001111000000000 ADFQEGTWVGVELDLPSGKNDGSIGGKQYFRCNPGYGLLVRPSRV 010000000000000000000000000000000000000000000 RRATSGPSSG 0001356899 >Dynactin-1; SWP:NA; PDB:2COYA GSSGSSGMAQSKRHVYSRTPSGSRMSAEASARPLRVGSRVEVIGK 999999999999999999999999997542100000000000000 GHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDE 000000000000000000000000000000000000000000000 GHGIFVRQSQIQVFEDSGPSSG 0000000000000012357899 >centrosome-associated pro; SWP:NA; PDB:2COZA GSSGSSGVEHEQQVTESPSLASVPTADELFDFHIGDRVLIGNVQP 999999999999999999999964211000000000000000000 GILRFKGETSFAKGFWAGVELDKPEGNNNGTYDGIAYFECKEKHG 000000000000000000000000000000000000000000000 IFAPPQKISHIPENFDDYVDINEDEDSGPSSG 00000000000001112222224568999999 >CLIPR-59 protein; SWP:NA; PDB:2CP0A GSSGSSGGNLMLSALGLRLGDRVLLDGQKTGTLRFCGTTEFASGQ 999986421000000000000000000000000000000111100 WVGVELDEPEGKNDGSVGGVRYFICPPKQGLFASVSKISKAVDAS 000000000000000001000000000000000000000011356 GPSSG 89999 >CLIP-115; SWP:NA; PDB:2CP2A GSSGSSGAAEVGDDFLGDFVVGERVWVNGVKPGVVQYLGETQFAP 999865421000000000000000000000000000000000000 GQWAGVVLDDPVGKNDGAVGGVRYFECPALQGIFTRPSKLTRQPS 000000000000000000000000000000000000000000001 GPSSG 24689 >CLIP-115; SWP:NA; PDB:2CP3A GSSGSSGLRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEP 998642100000000000000000000000000000000000000 LGKNDGAVAGTRYFQCPPKFGLFAPIHKVIRIGSGPSSG 000000000000000000000000000000001357899 >Restin; SWP:NA; PDB:2CP5A GSSGSSGMSMLKPSGLKAPTKILKPGSTALKTPTAVVAPVEKTIS 999999999999999999999999999999999999999999999 SEKASSTPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFA 999999999999765321100000000000000000000000000 PGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRPSKLTRKV 100000000000000000000000000000000000000000000 SGPSSG 124689 >Restin; SWP:NA; PDB:2CP6A GSSGSSGATPPISNLTKTASESISNLSEAGSIKKGERELKIGDRV 999999999999999999999999999999998654310000000 LVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYF 000000000000000000000000000000000000000000000 QCQPKYGLFAPVHKVTKIGFPSTTPAKAKANAVRRVMATTSASLK 000000000000000000135689999999999999999999999 RSPSASSLSSMSSVASSVSSRPSRTGLLTETSGPSSG 9999999999999999999999999999999999999 >Next to BRCA1 gene 1 prot; SWP:NA; PDB:2CP8A GSSGSSGQTAALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTEL 998643200000000000000000000000000000000000000 LQLSGPSSG 000124689 >Elongation factor Ts, mit; SWP:NA; PDB:2CP9A GSSGSSGSSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWL 997653210000000000000000000000000000000000000 HKEAQKEGWSKAASGPSSG 0000000002356899999 >KIAA0657 protein; SWP:NA; PDB:2CPCA GSSGSSGTDVSSWIVYPSGKVYVAAVRLERVVLTCELCRPWAEVR 987665432110000000000000000000000000000000000 WTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDDE 000000000000000000000000000000000000000000000 SASFTVTVTEPPVRIIYSGPSSG 00000000000001223556789 >APOBEC-1 stimulating prot; SWP:NA; PDB:2CPDA GSSGSSGDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVE 999999764321000000000000000000000000000000000 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVD 000000000000000000000000000000000000000000011 KDSSGPSSG 234567899 >RNA-binding protein EWS; SWP:NA; PDB:2CPEA GSSGSSGDPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMN 999999999864210000000000000000000000000000000 KRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDF 000000000000000000000000000000000000000000000 QGSKLKVSLARKKPPMNSGPSSG 00000000001356999999999 >RNA binding motif protein; SWP:NA; PDB:2CPFA GSSGSSGLFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAG 542100000000000000000000000000000000000000110 VLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISERATK 000000000000000000000000000000000000000012356 PASGPSSG 79999999 >RNA binding motif protein; SWP:NA; PDB:2CPHA GSSGSSGQVPKKQTTSKILVRNIPFQANQREIRELFSTFGELKTV 999999976542210000000000000000000000000000000 RLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLV 000011224310000000000000000000000000000000000 LEWADSEVTVQSGPSSG 00001112345789999 >CCR4-NOT transcription co; SWP:NA; PDB:2CPIA GSSGSSGASVRVVQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKI 999999999865321000000000000000000000000000000 HKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDG 000000011234432110000000000000000000000000000 RTLKASLGTTKYCSYSGPSSG 000000001134578999999 >Non-POU domain-containing; SWP:NA; PDB:2CPJA GSSGSSGGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 999999999865320000000000000000000000000000000 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 000000000000000000000000000000000000000001234 SLTSGPSSG 567899999 >Sperm-associated antigen; SWP:NA; PDB:2CPMA GSSGSSGQKVEFRKRMEKEVSDFIQDSGQIKKKFQPMNKIERSIL 999754200000000000000000000000000000000000000 HDVVEVAGLTSFSFGEDDDCRYVMIFKKEFAPSDEELDSYRRGSG 000000000000000000000000000000000000000000134 PSSG 6799 >TAR RNA-binding protein 2; SWP:NA; PDB:2CPNA GSSGSSGPVSPQQSECNPVGALQELVVQKGWRLPEYTVTQESGPA 999999999999753100000000000000000000000000000 HRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKMLLRVSGPSSG 00000000000000000000000000000000000000013568 >Fragile X mental retardat; SWP:NA; PDB:2CPQA GSSGSSGTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPG 999999864210000000000000000000000000000000000 VTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPSGPSS 000000000000000000000000000000000011223456899 G 9 >Exosome component 10; SWP:NA; PDB:2CPRA GSSGSSGKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKT 999999875423332211101111110000000000000000000 ARREDESYGYVLPNHMMLKIAEELPKEPQGIIACCNPVPPLVRQQ 000000000000000000000000000000000000000000000 INEMHLLIQQAREMPLLKSEVAAGVKKSSGPSSG 0000000000000000123467999999999999 >Vacuolar sorting protein; SWP:NA; PDB:2CPTA GSSGSSGMSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAV 999998642100000000000000000000000000000000000 QYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKNKEKKA 000000000000000000000000000000000000000000124 QKPVKEGQPSPADEKGNDSDGSGPSSG 568999999999999999999999999 >Cbl-interacting protein S; SWP:NA; PDB:2CPWA GSSGSSGRNRQQRPGTIKHGSALDVLLSMGFPRARAQKALASTGG 999999999999998764210000000000000000000000000 RSVQTACDWLFSHSGPSSG 0000000000002468999 >Hypothetical protein FLJ1; SWP:NA; PDB:2CPXA GSSGSSGEEIRKIPMFSSYNPGEPNKVLYLKNLSPRVTERDLVSL 999887787666554322110000000000000000000000000 FARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGY 000001110000000000121100000000000000000000000 KLYGKILVIEFGKNKKQRSSGPSSG 0000000000001234567999999 >RNA-binding protein 12; SWP:NA; PDB:2CPYA GSSGSSGEGDVNSAKVCAHITNIPFSITKMDVLQFLEGIPVDENA 999988664311000000000000000000000000000000000 VHVLVDNNGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHV 000001111100000000000000000000000000000000000 VTLEDMREIEKNPPAQGKSGPSSG 000000000000001234567899 >CUG triplet repeat RNA-bi; SWP:NA; PDB:2CPZA GSSGSSGLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQM 999999986432110000000000000000000000000000000 FMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGF 000000000000000110000000000000000000000000000 QIGMKRLKVQLKRSKNDSKSGPSSG 0000000000001234678999999 >Eukaryotic translation in; SWP:NA; PDB:2CQ0A GSSGSSGPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRI 999999999864210000000000000000000000000000000 YLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVE 000000000000000000000000000000000000000000000 WAKPSTNSGPSSG 0023678999999 >PTB-like protein L; SWP:NA; PDB:2CQ1A GSSGSSGDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNI 999887655431100000000000000000000000000000000 LMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNH 000011000000000000000000000000000000000000011 KELKTSGPSSG 31123568999 >hypothetical protein LOC9; SWP:NA; PDB:2CQ2A GSSGSSGAKHTLLRHEGIETVSYATQSLVVANGGLGNGVSRNQLL 998643211100000000000000000000000000000000000 PVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEVVD 000000000000000000000000000000000000000000000 DLGQKITLYLNFVEKVQWSGPSSG 000000000000000000124679 >RNA-binding protein 9; SWP:NA; PDB:2CQ3A GSSGSSGNSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDV 999999975421100000000000000000000000000000000 EIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 000013321000000000000000000000000000000000000 TARVMTNSGPSSG 1345678999999 >RNA binding motif protein; SWP:NA; PDB:2CQ4A GSSGSSGKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDF 999999999999986432111100000000000000000000000 FSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQR 000000000000012344432100000000000000000000000 LLGVPIIVQASQAEKNRLSGPSSG 000000000001111122457999 >Cysteine-rich secretory p; SWP:P16562; PDB:2CQ7A GSSGSSGSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCESG 998765321000000000000000000000000000000000246 PSSG 7999 >10-formyltetrahydrofolate; SWP:O75891; PDB:2CQ8A GSSGSSGFFKGAASSVLELTEAELVTAEAVRSVWQRILPKVLEVE 999999999987532100000000000000000000000000000 DSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDF 000000000000000000000000000000000000000000000 IQLLVRKLRGDDEESGPSSG 00000000013468999999 >RuvB-like 2; SWP:Q9Y230; PDB:2CQAA GSSGSSGKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEME 999998653210000000000000112332210000000011000 TIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARS 000000000000000000000000000000000000111235689 GPSSG 99999 >Peptidyl-prolyl cis-trans; SWP:NA; PDB:2CQBA GSSGSSGMATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIP 998866543210000000000000000000000000000000000 LDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 000000000000000000000000000000000000000000000 PMRIKESGPSSG 112356789999 >Arginine/serine-rich spli; SWP:P62995; PDB:2CQCA GSSGSSGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADV 999999999986321000000000000000000000000000000 SIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVS 000000101000000000000000000000000000000000000 GPSSG 02246 >RNA-binding region contai; SWP:NA; PDB:2CQDA GSSGSSGMHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIE 999999877654310000000000000000000000000000000 EAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANV 000000111111000000000000000000000000000000000 NLAYLGAKPRSLQTGFAIGVSGPSSG 00000011223456789999999999 >KIAA1064 protein; SWP:Q9UPT8; PDB:2CQEA GSSGSSGELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTT 999876532211100011111111111111110000000000000 GNCINGDDCMFSHDPLTEETRELLDKMLADDAEAGAEDEKEVEEL 000001110000000000000000000000000136899999999 KKSGPSSG 99999999 >TAR DNA-binding protein-4; SWP:Q13148; PDB:2CQGA GSSGSSGVKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMV 999999998754210000000000000000000000000000000 QVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLP 000001110000000000000000000000000000000000000 NSKQSQDSGPSSG 1222234567899 >IGF-II mRNA-binding prote; SWP:NA; PDB:2CQHA GSSGSSGMNKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLKSG 987653210000000000000000000000000000000000000 YAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKLRSSGP 000000000000000000000000000000000001234678999 SSG 999 >Nucleolysin TIAR; SWP:NA; PDB:2CQIA GSSGSSGMMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSC 999999998632100000000000000000000000000000000 KMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA 000001211000000000000000000000000000000000000 TTPSSQKSGPSSG 1245579999999 >U3 small nucleolar ribonu; SWP:Q9NV31; PDB:2CQJA GSSGSSGRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDP 997531000000000000000000000000000000000000000 AFLVTRSMEDFVTWVDSSKISGPSSG 00000000000000001122345679 >C-Mpl binding protein; SWP:Q71RC2; PDB:2CQKA GSSGSSGAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQ 998766532000000000000000000000000000000000000 FIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVRPS 000000000000000000000000000000000000000000000 HKRCISGPSSG 01245799999 >60S ribosomal protein L9; SWP:NA; PDB:2CQLA GSSGSSGMKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDF 998765321111100000000000000000000000000000000 NHINVELSLLGKKKKRLRVDKWWGNRKELATVRTICSHVQNMIKG 000000000001010000000000000000000000000000000 VTLGSGPSSG 0001234578 >Ribosomal protein L17 iso; SWP:Q9NRX2; PDB:2CQMA GSSGSSGLLRNLLTGLVRHERIEAPWARVDEMRGYAEKLIDYGKL 998642000000000000000000000000000000000000000 GDTNERAMRMADFWLTEKDLIPKLFQVLAPRYKDQTGGYTRMLQI 000000000000000000000000000000000001000000000 PNRSLDRAKMAVIEYKGNCLPPLPLPSGPSSG 01232210000000001121233456799999 >Formin-binding protein 3; SWP:O75400; PDB:2CQNA GSSGSSGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEPAF 998642000000000000000000000000000000000000000 EDITLESERKRIFKDFMHVLEHECQHSGPSSG 00000000000000000000000013589999 >Nucleolar protein of 40 k; SWP:NA; PDB:2CQOA GSSGSSGMNSGRPETMENLPALYTIFQGEVAMVTDYGAFIKIPGC 999999999987643210000000000000000000000000000 RKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKV 000000000000010000000000000000000000000000000 SLSMKVVNQGTGKDLDPNNVIIESGPSSG 00000000000000000000000134689 >RNA-binding protein 12; SWP:Q8R4X3; PDB:2CQPA GSSGSSGASSGKPGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGS 998777665432100000000000000000000000000000000 VCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLV 000000000000000000000000000000000000000000000 LGSGPSSG 00134568 >DnaJ homolog subfamily C; SWP:Q96KC8; PDB:2CQQA GSSGSSGAPEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELGRSV 976542100000000000000000000000000000000000000 TDVTTKAKQLKDSVTCSPGMVSGPSSG 000000000000012357899999999 >DnaJ homolog subfamily C; SWP:Q96KC8; PDB:2CQRA GSSGSSGSLRKERARSAEEPWTQNQQKLLELALQQYPRGSSDCWD 999999999875433211000000000000000000001110000 KIARCVPSKSKEDCIARYKLLVSGPSSG 0000000000000000000000013479 >peroxisomal D3,D2-enoyl-C; SWP:NA; PDB:2CQUA GSSGSSGMNRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYAL 999999865432100000000000000000000000000000000 YKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYVD 000000000000000000000000000000000000000000000 LVSSLSPSLESSSQVEPGTDSGPSSG 00000001123456789999999999 >Myosin light chain kinase; SWP:Q15746; PDB:2CQVA GSSGSSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFR 753101000000000000000000000000000000000000000 KQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQ 000000000000000000000000000000000000000000000 AQVNLTVVDKPDPPAGTPSGPSSG 000000000013468999999999 >Sushi domain containing 2; SWP:Q9DBX3; PDB:2CQWA GSSGSSGIPGPGFTAGAQGSCSLRCGAQDGLCSCHPTCSGLGTCC 999999999999865421000000000000000000000000000 EDFLDYCLEILPSSGSMMGGKDFVVQHLKWTDPSGPSSG 000000000001234578999999999999999999999 >LAG1 longevity assurance; SWP:Q9D6K9; PDB:2CQXA GSSGSSGGIKDSPVNKVEPNDTLEKVFVSVTKYPDEKRLKGLSKQ 999999999986421000000000000000000000000000000 LDWSVRKIQCWFRHRRNQDKPSGPSSG 000000000000000000012245799 >Propionyl-CoA carboxylase; SWP:P05165; PDB:2CQYA GSSGSSGDKIESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIG 999999999999999999864321100000000000000000000 YPVMIKASAGGGGKGMRIAWDDEETRDGFRLSSQEAASSFGDDRL 000000000001110000000000000000000000000000000 LIEKFIDNPRHISGPSSG 000000011235689999 >Nuclear migration protein; SWP:O35685; PDB:2CR0A GSSGSSGKPNLGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKD 875431100000000000000000000000000000000000000 VVVDIQRRHLRVGLKGQPPVVDGELYNEVKVEESSWLIEDGKVVT 000000000000000000000000000000000000000000000 VHLEKINKMEWWNRLVTSDPEINTKSGPSSG 0000000000000000000000001345679 >Speckle-type POZ protein; SWP:O43791; PDB:2CR2A GSSGSSGKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKL 765432000000000000000000111100000000000111000 KWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAK 000000000000000000000000000000000000000000000 GEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKL 000000000000000000000000000000000000000000000 TLFCEVSVVQDSVNISGQSGPSSG 000000000012356789999999 >Basic fibroblast growth f; SWP:P11362; PDB:2CR3A GSSGSSGVEVESFLVHPGDLLQLRCRLRDDVQSINWLRDGVQLAE 987542100000000000000000000000000000000000000 SNRTRITGEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSD 000000000000000000000000000000000000000000000 ALPSGPSSG 001235689 >SH3 domain-binding protei; SWP:P78314; PDB:2CR4A GSSGSSGEDYEKVPLPNSVFVNTTESCEVERLFKATSPRGEPQDG 999865322110000000000000000000000000000000000 LYCIRNSSTKSGKVLVVWDETSNKVRNYRIFEKDSKFYLEGEVLF 000000012221000000000000000000000000000000000 VSVGSMVEHYHTHVLPSHQSLLLRHPYGYTSGPSSG 000000000000000000000000000000123579 >Reproduction 8; SWP:Q9QZ49; PDB:2CR5A GSSGSSGEVPDLPEEPSETAEEVVTVALRCPNGRVLRRRFFKSWN 998764311000000000000000000000000000000000000 SQVLLDWMMKVGYHKSLYRLSTSFPRRALEVEGGSSLEDIGITVD 000000000000000000000000000000000000000000000 TVLNVEEKEQSSQSGPSSG 0000000012468999999 >KIAA1556 protein; SWP:Q5VST9; PDB:2CR6A GSSGSSGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPV 999986543210000000000000000000000000000000000 HWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEAG 000000000000000000000000000000000000000000000 DQRASAALRVTEKPSVFSRSGPSSG 0000000000000011211245799 >Paired amphipathic helix; SWP:Q62141; PDB:2CR7A GSSGSSGVHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQS 999877544321100000000000000000000000000000000 IDTPGVIRRVSQLFHEHPDLIVGFNAFLPSGPSSG 00000000000000000000000000001123568 >Mdm4 protein; SWP:O15151; PDB:2CR8A GSSGSSGSEDEWQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKL 999987642000000000000000000000000011246899999 THSGPSSG 99999999 >Poly [ADP-ribose] polymer; SWP:NA; PDB:2CR9A GSSGSSGKSEKRMKLTLKGGAAVDPDSGLEHSAHVLEKGGKVFSA 999999999999999864210000000000000000000000000 TLGLVDIVKGTNSYYKLQLLEDDKENRYWIFRSWGRVGTVIGSNK 000000010000000000000001100000000000111211000 LEQMPSKEDAIEHFMKLYEEKTGNAWHSKNFTKYPKKFYPLEISG 000000000000000000000000000110000000000000123 PSSG 5689 >Homeobox protein Hox-B13; SWP:NA; PDB:2CRAA GSSGSSGRKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATS 999998642100000000000000000000000000000000000 LSERQITIWFQNRRVKEKKSGPSSG 0000000000000000011245799 >nuclear receptor binding; SWP:NA; PDB:2CRBA GSSGSSGMEGPLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYL 876432101000000000000000000000000000000000000 SEAMKLTESEQAHLSLELQRDSHMKQLLLIQERWKRAKREERLKA 000000000000000000000000000000000000000001111 HSGPSSG 2356799 >HEF-like protein; SWP:NA; PDB:2CREA GSSGSSGLLARALYDNCPDCSDELAFSRGDILTILEQHVPESEGW 753211000000000000000000000000000000000000000 WKCLLHGRQGLAPANRLQILSGPSSG 00000000000000000000124579 >RAN binding protein 3; SWP:NA; PDB:2CRFA GSSGSSGTARKCLLEKVEVITGEEAESNVLQMQCKLFVFDKTSQS 999999999999999978654333210000000000000001000 WVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQ 000000000000000000000000000000010000000000000 MQIDKASEKSIHITAMDTEDQGVKVFLISASSKDTGQLYAALHHR 000000000000000000000000000000000000000000000 ILALRSRVESGPSSG 000000001234569 >Metastasis associated pro; SWP:NA; PDB:2CRGA GSSGSSGMEEWSASEACLFEEALEKYGKDFNDIRQDFLPWKSLTS 999865321100000000000000000000000000000000000 IIEYYYMWKTTDRYVQQKRSGPSSG 0000000001123456899999999 >Vav proto-oncogene; SWP:NA; PDB:2CRHA GSSGSSGKAEAEQNWWEGPPQDLSVHLWYAGPMERAGAESILANR 999999999999988654311000000000000000000000000 SDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKK 000000000001110000000000000000000000000000000 AFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKEPEKRTISRSGP 000000000000000000000000000000000000124677899 SSG 999 >SWI/SNF-related matrix-as; SWP:NA; PDB:2CRJA GSSGSSGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAE 654321000000000000000000000000000000000000000 WSKLQPAEKQRYLDEAEKEKQQYLKELWAYQQSEAYKVCTESGPS 000000000000000000000000000000010111123568999 SG 99 >Copper chaperone for supe; SWP:NA; PDB:2CRLA GSSGSSGMASDSGNQGTLCTLEFAVQMTCQSCVDAVRKSLQGVAG 999999987654321000000000000000000000000000000 VQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQL 000000000000000000000000000000000000000122468 QNSGPSSG 99999999 >Fibronectin type-III doma; SWP:NA; PDB:2CRMA GSSGSSGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDN 999999977654322111000000000000000000000000111 GGATINKYVVEMAEGSNGNKWEMIYSGATREHLCDRLNPGCFYRL 110000000000000011100000000000000000000000000 RVYCISDGGQSAVSESLLVQTPAVSGPSSG 000000010000000000000000236899 >UBASH3A protein; SWP:NA; PDB:2CRNA GSSGSSGSSPSLLEPLLAMGFPVHTALKALAATGRKTAEEALAWL 998754321100000000000000000000000000000000000 HDHCNDPSLDDPISGPSSG 0000111111121346799 >Regulator of G-protein si; SWP:NA; PDB:2CRPA GSSGSSGPEKPAKTQKTSLDEALQWRDSLDKLLQNNYGLASFKSF 999999999975421100000000000000000000000000000 LKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEFIQTEAP 000000000000000000000000000000000000000000000 KEVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEKDSLPRFV 000000000000000000000000000000000000000000000 RSEFYQELISGPSSG 000000000012346 >mitochondrial translation; SWP:NA; PDB:2CRQA GSSGSSGPKTGPTMTKELVFSSNIGQHDLDTKSKQIQQWIEKKYH 999876543322100000000000000000000000000000000 VQVTIKRRKDAEQSEEETEEIFNQILQTMPDIATFSSRPKAIRGG 000000012112111000000000000000000000000000001 TASMCVFRHLSKKEEKSGPSSG 0000000000122234567899 >Stromal membrane-associat; SWP:NA; PDB:2CRRA GSSGSSGKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASW 999988765433210000000000000000000000000000000 NIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDMGN 000000000000000000000000000000000000000000000 TKARLLYEANLPENFRRPQTDQAVEFFIRDKYEKKKYYDKNAIAI 000000000000110000000000000000000000000000124 SGPSSG 689999 >Programmed cell death pro; SWP:NA; PDB:2CRUA GSSGSSGLRRQRLAELQAKHGDPGDAAQQEAKHREAEMRNSILAQ 999999999999999999999754322111110000000000000 VLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQG 000000000000000001100000000000000000010000000 LIEILKKVSQQTEKTTTVKFNRSGPSSG 0000010112246999999999999999 >Translation initiation fa; SWP:NA; PDB:2CRVA GSSGSSGYPIGEASILATFTVTEGKKKIPVADCRVQKGQLERHKK 865421100000000000000001000000000000000000000 FKLIRNGQVIWKGSLTSLKHHKDDISVIKTGMDCGLSLDEEKVEF 000000000000000000001100000000000000000000000 KPGDQVICYEENKVPTKTSWDPGFSGPSSG 000000000011234567999999999999 >ADP-ribosylation factor G; SWP:NA; PDB:2CRWA GSSGSSGMGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASI 998654210000000000000000000000000000000000000 TYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGG 000000000000000000000000000000000000000000000 NASASSFFHQHGCSTNDTNAKYNSRAAQLYREKIKSLASQATRKH 000000000000000000000000000000000000000000011 GTDLWLDSSGPSSG 11000123456667 >Kin of IRRE-like protein; SWP:NA; PDB:2CRYA GSSGSSGTLTVNGPPIISSTQTQHALHGEKGQIKCFIRSTPPPDR 999865421000000000000111011100000000000000000 IAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQT 000000000000000100000000000000000000000000000 IYNCTAWNSFGSDTEIIRLKEQGSEMSGPSSG 00000000000000000000112356789999 >Fibronectin type-III doma; SWP:NA; PDB:2CRZA GSSGSSGPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYS 864210000000000000000000000000000000000000000 VEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGF 000000000000000000000000000000000000000000000 GPFSEKCDITTAPGSGPSSG 00000000000000135579 >Hematopoietic SH2 domain; SWP:NA; PDB:2CS0A GSSGSSGGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRVS 999999997642100000000000000000000000000000000 HSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALV 000000000000000000000000000000000000000000000 TFHQQKPIEPRRELLTQPCRQKDSGPSSG 00000000000000000000002346799 >PMS1 protein homolog 1; SWP:NA; PDB:2CS1A GSSGSSGIKKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEEL 976532211000000000000000000010000000000000000 WKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQESQMSLKDSGPS 000000000000000000000000000111122223456789999 SG 99 >Poly [ADP-ribose] polymer; SWP:NA; PDB:2CS2A GSSGSSGGSKAEKTLGDFAAEYAKSNRSTCKGCMEKIEKGQVRLS 998766543221000000000000000000000000000000000 KKMVDPEKPQLGMIDRWYHPGCFVKNREELGFRPEYSASQLKGFS 000011111100000000000000000000000000000000000 LLATEDKEALKKQLPGVKSEGKRKGDEVDGVDEVAKKKSGPSSG 00000000000000001234568999999999999999999999 >Protein C14orf4; SWP:NA; PDB:2CS3A GSSGSSGSPMANSGPLCCTICHERLEDTHFVQCPSVPSHKFCFPC 999999999986421000000000011000000000000000000 SRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIATILSGP 000000000000000000000000010000000000000000013 SSG 468 >Protein C12orf2; SWP:NA; PDB:2CS4A GSSGSSGMELKVWVDGVQRIVCGVTEVTTCQEVVIALAQAIGRTG 765321000000000000000000000000000000000001111 RYTLIEKWRDTERHLAPHENPIISLNKWGQYASDVQLILRRTGPS 000000000000000000000000000000000000000001134 GPSSG 56789 >Tyrosine-protein phosphat; SWP:NA; PDB:2CS5A GSSGSSGNGGIPHDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIV 999999999764321000000000111000000000000000000 SRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 000000000000000000000000000000000000000000000 CERHSGELMLLVRPNAVYDVVEESGPSSG 01122100000000113568999999999 >KIAA0535 protein; SWP:NA; PDB:2CS8A GSSGSSGPELKCPVIGCDGQGHISGKYTSHRTASGCPLAAKRQKE 999999999999999999999999999999998997665456578 NPLNGASLSWKLNKQELPHCPLPGCNGLGHVNNVFVTHRSLSGCP 999999999999999999999999999988899999999878765 LNAQVIKKGKVSSGPSSG 566689999999999999 >DNA-binding protein SATB2; SWP:Q9UPW6; PDB:2CSFA GSSGSSGPIKVDGANINITAAIYDEIQQEMKRAKVSQALFAKVAA 999999998755310000000000000000000000000000000 NKSQGWLCELLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVI 000000000000000000000000000000000000000000000 YEEESSGPSSG 00000013468 >Zinc finger protein 297B; SWP:O43298; PDB:2CSHA GSSGSSGDKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGK 999999999988789999897666544433444566766688986 KFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTK 667899878877887777554334544334566654454345456 SYEAAKAEQNTTEASGPSSG 77799999999999999999 >RIM binding protein 2; SWP:O15034; PDB:2CSIA GSSGSSGRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEI 765321000000000000000000000000000000000000000 DEDGFYYGELNGQKGLVPSNFLEEVSGPSSG 0000000000000000000000000124679 >Tjp2 protein; SWP:NA; PDB:2CSJA GSSGSSGMEEVIWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGE 998765321000000000000000000000000000000000000 TSIVISDVLPGGPADGLLQENDRVVMVNGTPMEDVLHSFAVQQLR 000000000000000000000000000000000000000000000 KSGKIAAIVVKRPRKVQVAPLSGPSSG 000000000000000112345789999 >Sorting nexin 12; SWP:Q9UMY4; PDB:2CSKA GSSGSSGSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPIFKLK 865432100000000000000123211000000000000000000 ESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEG 000000000000000000011110000000012345666665432 IFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEEAIDRN 210000000000000000000000000000000000000000001 YVPGKSGPSSG 01134567899 >Pleckstrin; SWP:P08567; PDB:2CSOA GSSGSSGRSIRLPETIDLGALYLSMKDTEKGIKELNLEKDKKIFN 986544321100000000000000000000000000000000000 HCFTGNCVIDWLVSNQSVRNRQEGLMIASSLLNEGYLQPAGDMSK 000000000000000000000000000000000000000000000 SAVDGTAENPFLDNPDAFYYFPDSGFFCEENSGPSSG 0000110000000000000000000000000124689 >RIM binding protein 2; SWP:O15034; PDB:2CSPA GSSGSSGVEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLT 999999998642110000000000000000000000000000000 PTGLSNGANVTGYGVYAKGQRVAEVIFPTADSTAVELVRLRSLEA 000000000000000000000000000000000000000000000 KGVTVRTLSAQGESVDSAVAAVPPELLVPPTPHPSGPSSG 0000000000000000000000000000001245899999 >RIM binding protein 2; SWP:O15034; PDB:2CSQA GSSGSSGTDPGAEELPARIFVALFDYDPLTMSPNPDAAEEELPFK 999999997653210000000000000000000000000000000 EGQIIKVYGDKDADGFYRGETCARLGLIPCNMVSEIQADDEEMMD 000000000000000000000000000000000000124568999 QSGPSSG 9999999 >Regulating synaptic membr; SWP:Q86UR5; PDB:2CSSA GSSGSSGVTWQPSKEGDRLIGRVILNKRTTMPKDSGALLGLKVVG 743100000000000000000000000011122111000000000 GKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGA 000000000000000000000000000000000000000000000 TNEEVYNIILESKSEPQVEIIVSRPSGPSSG 0000000000000000000000000013579 >Tripartite motif protein; SWP:Q14134; PDB:2CSVA GSSGSSGQLLEPIRDFEARKCPVHGKTMELFCQTDQTCICYLCMF 999999999975332110000000000000000000000000000 QEHKNHSTVTVEEAKAEKETESGPSSG 000000000000000000013589999 >Ubiquitin ligase protein; SWP:O76064; PDB:2CSWA GSSGSSGVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFG 999999999853100000000000000000000000000000010 VTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRA 000000000000000000000000000000000000000000000 RLEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVTEEDWETIYPC 000000000000000000000011000000000000000000000 LSPKSGPSSG 0000012346 >Zinc finger protein 183-l; SWP:Q8IZP6; PDB:2CSYA GSSGSSGGSEEEEIPFRCFICRQAFQNPVVTKCRHYFCESCALEH 999876543210000000000000000000000000000000000 FRATPRCYICDQPTGGIFNPAKELMAKLQKSGPSSG 000000000000000000000000000012345678 >Synaptotagmin-like protei; SWP:Q96C24; PDB:2CSZA GSSGSSGLLEIKRKGAKRGSQHYSDRTCARCQESLGRLSPKTNTC 999999999999766788765321000000000000000000000 RGCNHLVCRDCRIQESNGTWRCKVCSGPSSG 0000000000000000100000000001235 >Non-SMC element 1 homolog; SWP:Q8WV22; PDB:2CT0A GSSGSSGRETYPDAVKICNICHSLLIQGQSCETCGIRMHLPCVAK 999998753235531000000000000000000000000000000 YFQSNAEPRCPHCNDYWPHEIPKSGPSSG 00011100000000100000000123467 >Transcriptional repressor; SWP:P49711; PDB:2CT1A GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK 999999997643000000000000000000000000000000000 FHCPHCDTVIARKSDLGVHLRKQHSYSGPSSG 00000000000000000000000000135689 >Tripartite motif protein; SWP:Q13049; PDB:2CT2A GSSGSSGNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQC 999987653211100000000000000000000000000000000 LEKLLASSINGVRCPFCSKITRITSLTQLTDNLTVLKSGPSSG 0000000001000000000000000000000000000235689 >Vinexin; SWP:O60504; PDB:2CT3A GSSGSSGTPYRAMYQYRPQNEDELELREGDRVDVMQQCDDGWFVG 865421000000000000000000000000000000000000000 VSRRTQKFGTFPGNYVAPVSGPSSG 0000000000000000000012468 >Cdc42-interacting protein; SWP:NA; PDB:2CT4A GSSGSSGGHCVAIYHFEGSSEGTISMAEGEDLSLMEEDKGDGWTR 988642100000000000111100000000000000000000000 VRRKEGGEGYVPTSYLRVTSGPSSG 0000000000000000000124579 >Zinc finger BED domain co; SWP:NA; PDB:2CT5A GSSGSSGSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT 876553210000001122346654332100000000000001110 SNLSYHLEKNHPEEFCEFVKSNSGPSSG 0000000000000000000123444455 >sh3 domain-binding glutam; SWP:NA; PDB:2CT6A GSSGSSGMVIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVD 865432100000000001000000000000000000000000000 ITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIFNGDRYCGDYDSFF 000000000000000000000110000000000000000000000 ESKESNTVFSFLGLKSGPSSG 000000000000001234345 >RING finger protein 31; SWP:NA; PDB:2CT7A GSSGSSGALFHKKLTEGVLMRDPKFLWCAQCSFGFIYEREQLEAT 999999999999999997531100000001000000000100000 CPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNSGPSSG 00000000000000000000000000000000000013467 >Zinc finger protein 512; SWP:NA; PDB:2CTDA GSSGSSGRIRKEPPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGR 999999999998765556654333223223333222334444332 KTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP 211221222233345555789999764443442223334565799 SGPSSG 999999 >Vigilin; SWP:NA; PDB:2CTEA GSSGSSGDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELK 999999876654321000000000000000000000000000000 TATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRSG 000000000000000000000000000000000000000000124 PSSG 6799 >Vigilin; SWP:NA; PDB:2CTFA GSSGSSGEPEKLGQALTEVYAKANSFTVSSVAAPSWLHRFIIGKK 999999999999999999976532100000000000000000011 GQNLAKITQQMPKVHIEFTEGEDKITLEGPTEDVSVAQEQIEGMV 000000000000000000000000000000000000000000000 KDLINRSGPSSG 000000124579 >Vigilin; SWP:NA; PDB:2CTJA GSSGSSGSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEE 999999999764210000000000000000000000000000000 CGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKS 000000000000100000000000000000000000000000134 GPSSG 69999 >Vigilin; SWP:NA; PDB:2CTKA GSSGSSGKEALEALVPVTIEVEVPFDLHRYVIGQKGSGIRKMMDE 999998754321000000000000000000000110000000000 FEVNIHVPAPELQSDIIAITGLAANLDRAKAGLLERVKELQAEQE 000000000000000000000000000000000000000000000 DRALRSFKSGPSSG 00011468999999 >Vigilin; SWP:NA; PDB:2CTLA GSSGSSGEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQIRLE 999875432100000000000000000000000000000000000 HDVNIQFPDKDDGNQPQDQITITGYEKNTEAARDAILRIVGELEQ 000000000000000000000000000000000000000000000 MSGPSSG 0235799 >Vigilin; SWP:NA; PDB:2CTMA GSSGSSGRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDE 876432110000000000000000000000000000000000000 FKVDIRFPQSGAPDPNCVTVTGLPENVEEAIDHILNLEEEYLADS 000000000000000000000000000000000000000000001 GPSSG 24579 >novel protein; SWP:NA; PDB:2CTOA GSSGSSGMPNRKASRNAYYFFVQEKIPELRRRGLPVARVADAIPY 999999999864210000000000000000000000000000000 CSSDWALLREEEKEKYAEMAREWRAAQGKDPGPSEKQKPVFTSGP 000000000000000000000000000024689999999999999 SSG 999 >DnaJ homolog subfamily B; SWP:NA; PDB:2CTPA GSSGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGA 754432000000000000000000000000000000000010100 TEAFKAIGTAYAVLSNPEKRKQYDQFGSGPSSG 000000000000000000000000001357899 >DnaJ homolog subfamily C; SWP:NA; PDB:2CTQA GSSGSSGMDAILNYRSEDTEDYYTLLGCDELSSVEQILAEFKVRA 999999999999976532210000000000000000000000000 LECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 000000001111000000000000000000000000000000000 SMPFQQWEALNDSVKTSGPSSG 0000000000112346689999 >DnaJ homolog subfamily B; SWP:NA; PDB:2CTRA GSSGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDA 654311000000000000000000000000000000000000000 EAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQSGPSSG 0000000000000000000000000000000013344567799 >DnaJ homolog subfamily A; SWP:NA; PDB:2CTTA GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKV 999999999999999999999996321000000000000000000 QHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIIISPCVVCRGA 000000000000000000000000000000000000000000000 GQAKQKKRSGPSSG 00001246799999 >Zinc finger protein 483; SWP:NA; PDB:2CTUA GSSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKTPMCEKC 999999999987643110000000000000123333210000000 RKDSCQEAALNKDEGNESGKKTSGPSSG 0001245678999999999878999999 >DnaJ homolog subfamily C; SWP:NA; PDB:2CTWA GSSGSSGRQRSLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKY 999999999987653211000000000000000000000000000 HPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLYVA 011111110000000000000000000000000000000000000 EQFGEENVNTYFVSGPSSG 0110000001001246789 >KIAA1915 protein; SWP:NA; PDB:2CU7A GSSGSSGYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQ 999976422100000000000000000000000000000000000 VKSYARQYFKNKVKCGLDKETPNQKTG 000000000000134689999999999 >Cysteine-rich protein 2; SWP:NA; PDB:2CU8A GSSGSSGMASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKT 765443211000000000000000000000000000000000000 LTPGGHAEHDGKPFCHKPCYATLFGSGPSSG 0000000000000000000000001247899 >Cytoplasmic protein NCK1; SWP:NA; PDB:2CUBA GSSGSSGDPGERLYDLNMPAYVKFNYMAEREDELSLIKGTKVIVM 999997643210000000000000000000000000000000000 EKCSDGWWRGSYNGQVGWFPSNYVTEEGDSPLGDHVGSGPSSG 0000000000000000000000000001357999999999999 >SH3 domain containing rin; SWP:NA; PDB:2CUCA GSSGSSGNMFVALHTYSAHRPEELDLQKGEGIRVLGKYQDGWLKG 976542000000000000000000000000000000000000000 LSLLTGRTGIFPSDYVIPVSGPSSG 0000000000000000000023689 >SRC-like-adapter; SWP:NA; PDB:2CUDA GSSGSSGPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVI 999999976654321000000000000000000000000000000 SDEGGWWKAISLSTGRESYIPGICVARVSGPSSG 0000000000000000000000000000124679 >Paired box protein Pax6; SWP:NA; PDB:2CUEA GSSGSSGQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 999976543321000000000000000000000000000000000 LPEARIQVWFSNRRAKWRREEKLRNQRRQSGPSSG 00000000000000000000000001113578999 >FLJ21616 protein; SWP:NA; PDB:2CUFA GSSGSSGRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACN 999999865321000000000000000000000000000000000 AVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIAAILESS 000000000000000000000000000000000000013577999 GPSSG 99999 >mKIAA0962 protein; SWP:NA; PDB:2CUGA GSSGSSGILQSLSALDFDPYRVLGVSRTASQADIKKAYKKLAREW 999877765554310000000000000000000000000000000 HPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGPSSG 0000000000000000000000000000000000011236799 >Tenascin-X; SWP:NA; PDB:2CUHA GSSGSSGPDGPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAP 987543110000000001011100000000000000000000000 GAPPLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPNLTSPASI 000000000000000000000000000000000000000000000 TFTTGLEAPRDLEAKEVTPSGPSSG 0000112355434678999999999 >Tenascin-X; SWP:NA; PDB:2CUIA GSSGSSGSRPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGV 999976430000000000000000000000000000000000000 PSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSLTLYGL 000111111100000000000000000000000000000000000 RGPHKADSIQGTARTLSGPSSG 0000000000000000012357 >transcriptional adaptor 2; SWP:NA; PDB:2CUJA GSSGSSGIDSGLSPSVLMASNSGRRSAPPLNLTGLPGTEKLNEKE 999999999999999999986543110000000000000000000 KELCQVVRLVPGAYLEYKSALLNECHKQGGLRLAQARALIKIDVN 000000000000000000000000000000000000000000000 KTRKIYDFLIREGYITKA 000000000000000000 >Tenascin-X; SWP:NA; PDB:2CUMA GSSGSSGLEAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTP 754432100000000000000000000000000000000000000 GGQTQEILLPGGITSHQLLGLFPSTSYNARLQAMWGQSLLPPVST 100000000100000000000000000000000001000000000 SFTTGGLRISGPSSG 000000012345689 >Skeletal muscle LIM-prote; SWP:NA; PDB:2CUPA GSSGSSGCVECRKPIGADSKEVHYKNRFWHDTCFRCAKCLHPLAN 986543333344433444432221222222332222333322123 ETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVW 211122332111122223343357999987567987434687534 HKDCFSGPSSG 67886668999 >Four and a half LIM domai; SWP:NA; PDB:2CUQA GSSGSSGPCYENKFAPRCARCSKTLTQGGVTYRDQPWHRECLVCT 999999976543210000000000001100000000000000000 GCQTPLAGQQFTSRDEDPYCVACFGELFASGPSSG 00000000000000000000000000000135689 >Skeletal muscle LIM-prote; SWP:NA; PDB:2CURA GSSGSSGCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKLAGQR 654321000000000000000000000000000000000000000 FTAVEDQYYCVDCYKNFVSGPSSG 000000000000000000123468 >SN4m; SWP:NA; PDB:2CW1A MRKKLDLKKFVEDKNQEYAARALGLSQKLIEEVLKRGLPVYVETN 100000000000000000000001000000000000000000000 KDGNIKVYITQDGITQPFPP 10000000000110000011 >chimera of Immunoglobulin; SWP:NA; PDB:2CWBA MHHHHHHQYKLALNGKTLKGETTTEAVDAATAEKVFKQYANDNGV --------------------------------------------- DGEWTYDDATKTFTVTEGSQWQPQLQQLRDMGIQDDELSLRALQA -----------------4210000000000000000000000000 TGGDIQAALELIFAGGAP 000000000000012124 >S100 calcium-binding prot; SWP:P97352; PDB:2CXJA MAAETLTELEAAIETVVSTFFTFAGREGRKGSLNINEFKELATQQ 111100000000000000000000000111000000000000000 LPHLLKDVGSLDEKMKTLDVNQDSELRFSEYWRLIGELAKEVRKE 000000000000000000000000000000000000000000000 KALGIRKK 00000001 >Bud emergence protein 1; SWP:P29366; PDB:2CZOA GPLGSKPQNKSAKLVDGELLVKASVESFGLEDEKYWFLVCCELSN ---------210000110000000000000010000000000000 GKTRQLKRYYQDFYDLQVQLLDAFPAEAGKLRDAGGQWSKRIMPY 100000000000000000000000000000112343221100000 IPGPVPYVTNSITKKRKEDLNIYVADLVNLPDYISRSEMVHSLFV 111222110000000000000000000000000000000000000 VLNNGFDREFERDENQNNIK 0112---------------- >Wnt inhibitory factor-1; SWP:Q9Y5W5; PDB:2D3JA GSHMLDQQEESLYLWIDAHQARVLIGFEEDILIVSEGKMAPFTHD 999986431000000000000011100000000000000000000 FRKAQQRMPAIPVNIHSMNFTWQAAGQAEYFYEFLSLRSLDKGIM 001121100000000000000000000000000000000000000 ADPTVNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEVDVIVMNS 000000000000000000000000000000000000000000000 EGNTILQTPQNAIFFKTCLQAE 0000000000000000000011 >calcium channel, voltage-; SWP:O00305; PDB:2D46A GSHMYDNLYLHGIEDSEAGSADSYTSRPSDSDVSLEEDREAIRQE 000000000000000000000000000000000000000000000 REQQAAIQLERAKSKP 0000000000000000 >ASABF; SWP:P90683; PDB:2D56A AVDFSSCARMDVPGLSKVAQGLCISSCKFQNCGTGHCEKRGGRPT 976532233332210000000000000000000000001111000 CVCDRCGR 00000113 >WD repeat and HMG-box DNA; SWP:O75717; PDB:2D7LA GSSGSSGRPKTGFQMWLEENRSNILSDNPDFSDEADIIKEGMIRF 999864321000000000000000000000000000000000000 RVLSTEERKVWANKAKGETASEGTEAKKRKSGPSSG 000000000000000013579999999999999999 >Filamin-C; SWP:Q14315; PDB:2D7MA GSSGSSGAHDASKVRASGPGLNASGIPASLPVEFTIDARDAGEGL 765532100000000000000000000000000000000000000 LTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGG 000000000000000000000000000000000000000000000 DEIPYSPFRIHALPTGDASSGPSSG 0000000000000002334322356 >Filamin-C; SWP:Q14315; PDB:2D7NA GSSGSSGLRPFNLVIPFAVQKGELTGEVRMPSGKTARPNITDNKD 754321000000000000010000000000000000000000000 GTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDAINSRHSGP 000000000000000000000000000000000000001246678 SSG 899 >Filamin-C; SWP:Q14315; PDB:2D7OA GSSGSSGAINSRHVSAYGPGLSHGMVNKPATFTIVTKDAGEGGLS 999998754310000000000000000000000000000110000 LAVEGPSKAEITCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIP 000000000000000000000000000000000000000000000 GSPFTAKITGDDSMRSGPSSG 000000000013467899999 >Filamin-C; SWP:Q14315; PDB:2D7PA GSSGSSGSDDARRLTVTSLQETGLKVNQPASFAVQLNGARGVIDA 999975421000000000000000000000000000000000000 RVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHI 000000000000000001000000000000000000000000000 PGSPFKIRVGEQSQAGSGPSSG 0000000000123456899999 >Filamin-C; SWP:Q14315; PDB:2D7QA GSSGSSGAGDPGLVSAYGPGLEGGTTGVSSEFIVNTLNAGSGALS 999865310000000000000000000000000000000000000 VTIDGPSKVQLDCRECPEGHVVTYTPMAPGNYLIAIKYGGPQHIV 000000000000000000000000000000000000000000000 GSPFKAKVTGPRLSGSGPSSG 000000000000012468999 >L-plastin; SWP:P13796; PDB:2D85A GSSGSSGNDDIIVNWVNETLREAEKSSSISSFKDPKISTSLPVLD 998754210000000000000000000000000000000000000 LIDAIQPGSINYDLLKTENLNDDEKLNNAKYAISMARKIGARVYA 000000000000000000000000000000000000000000000 LPEDLVEVNPKMVMTVFACLMGKGMKRVSGPSSG 0000000000000000000000012347999999 >Smoothelin splice isoform; SWP:P53814; PDB:2D87A GSSGSSGIKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALV 986431000000000000000000000000000000000000000 HNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHADCPQLLDTEDMV 000000000000000000000000000000000000000000000 RLREPDWKCVYTYIQEFYRCLVQKGLVKTKKSSGPSSG 00000000000000000000000000011234679999 >Protein MICAL-3; SWP:Q7RTP6; PDB:2D88A GSSGSSGVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCA 999999753100000000000000000000000000000000000 IIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKE 000000000000000000000000000000000000000000000 MASVGEPDKLSMVMYLTQFYEMFKDSGPSSG 0000000000000000000000000123569 >EHBP1 protein; SWP:Q8NDI1; PDB:2D89A GSSGSSGPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCA 766543211100000000000000000000000000000000000 ILHHFRPDLIDYKSLNPQDIKENNKKAYDGFASIGISRLLEPSDM 000000000000000000000000000000000000000000000 VLLAIPDKLTVMTYLYQIRAHFSSGPSSG 00000000000000000000000013457 >Twinfilin-1; SWP:Q91YR1; PDB:2D8BA GSSGSSGEVQTDVSVDTKHQTLQGVAFPISRDAFQALEKLSKKQL 999999999999999998654310000000000000000000000 NYVQLEIDIKNETIILANTENTELRDLPKRIPKDSARYHFFLYKH 000000000000000000000000000000000000000000000 SHEGDYLESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQ 000000000000000000000000000000000000000000000 MDVIRKIEIDNGDELTADFLYDEVHSGPSSG 0000000000000000000000000023568 >Phosphatidylcholine:ceram; SWP:Q8VCQ6; PDB:2D8CA GSSGSSGMLSARTMKEVVYWSPKKVADWLLENAMPEYCEPLEHFT 999999975321000000000000000000000000000000000 GQDLINLTQEDFKKPPLYRVSSDNGQRLLDMIETLKMEHHMEAHK 000000000000000000000000000000000000000001357 NSGPSSG 9999999 >SH3YL1 protein; SWP:Q9Y3V5; PDB:2D8HA GSSGSSGHERVGNLNQPIEVTALYSFEGQQPGDLNFQAGDRITVI 999998764432100000000000000000100000000000000 SKTDSHFDWWEGKLRGQTGIFPANYVTMNSGPSSG 00000000000000000000000000001234679 >T-cell lymphoma invasion; SWP:Q59GK8; PDB:2D8IA GSSGSSGEIEICPKVTQSIHIEKSDTAADTYGFSLSSVEEDGIRR 999999998543100000000000111000000000000000000 LYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ 000000011000000000000000000000000000000000000 PSLGLLVRTYPELEEGVESGPSSG 000000000001233578999999 >fyn-related kinase; SWP:Q8BPC1; PDB:2D8JA GSSGSSGQYFVALFDYQARTAEDLSFRAGDKLQVLDTSHEGWWLA 987531000000000000000000000000000000000100000 RHLEKKGTGLGQQLQGYIPSNYVAEDSGPSSG 00001234443100000000000000012457 >synaptotagmin VII; SWP:Q62747; PDB:2D8KA GSSGSSGSRENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSG 999875421100000000000000000000000000000000110 TSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKV 000000000000000000000000000000000000000000000 VQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 000000000000112210000000000000000000000000000 SGPSSG 013689 >DNA-repair protein XRCC1; SWP:P18887; PDB:2D8MA GSSGSSGEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSELRDKA 999999998754310000000000000000000000000000000 LELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVL 000000000000000000000000000000000000000000000 DCHRMRRRLPSQRYLMAGPGSSSEEDEASHSGGSGPSSG 000000000000000001222344456778999999999 >Zinc finger MYND domain c; SWP:O75800; PDB:2D8QA GSSGSSGLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVK 999998765443211000000000000001000000000000000 HWEKHGKTCVLAAQGDRAKSGPSSG 0000000000112346799999999 >THAP domain-containing pr; SWP:Q9H0W7; PDB:2D8RA GSSGSSGMPTNCAAAGCATTYNKHINISFHRFPLDPKRRKEWVRL 999986532100000101011222100000000000000000000 VRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIFDFC 001110001100000000001000011211000000000011235 THISGPSSG 678999999 >cellular modulator of imm; SWP:Q5T0T0; PDB:2D8SA GSSGSSGTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVH 999999999965310000000000000000000000011100000 QACLQQWIKSSDTRCCELCKYEFIMETKLSGPSSG 00000000000000000000000011235679999 >RING finger protein 146; SWP:Q9NTX7; PDB:2D8TA GSSGSSGNTAPSLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGA 999999999753200000000000000000000000000000000 SWLGKRCALCRQEIPEDFLDSGPSSG 00010000000000000001235679 >Ubiquitin ligase TRIM63; SWP:Q969Q1; PDB:2D8UA GSSGSSGHPMCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEV 999865321001011110000000000000000000000000000 APLQSVFQGQKTESGPSSG 0001112222223456799 >Zinc finger FYVE domain-c; SWP:Q9DAZ9; PDB:2D8VA GSSGSSGLPWCCICNEDATLRCAGCDGDLYCARCFREGHDNFDLK 876431000000000000000000000000000000000000000 EHQTSPYHPRRPCQEHSGPSSG 0000000001123457899999 >Protein PINCH; SWP:P48059; PDB:2D8XA GSSGSSGCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIG 865310000000000000000000000000000000000000000 FVKNAGRHLCRPCHNREKASGPSSG 0000000000000000000135679 >EPLIN protein; SWP:Q53GG0; PDB:2D8YA GSSGSSGMKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRC 999999998643210000000000000000000000000000000 SYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGSGPSS 000000000000000000000000000000134689999999999 G 9 >Four and a half LIM domai; SWP:Q4G0X1; PDB:2D8ZA GSSGSSGCVQCKKPITTGGVTYREQPWHKECFVCTACRKQLSGQR 654200000000000000000000000000000000000000100 FTARDDFAYCLNCFCDLYASGPSSG 0000000000000000000124679 >InaD-like protein; SWP:Q8NI35; PDB:2D92A GSSGSSGELALWSPEVKIVELVKDCKGLGFSILDYQDPLDPTRSV 999865310000000000000000000000000000000000000 IVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILK 000000000000000000000000000000000000000000000 AVPPGLVHLGICSGPSSG 000000000000000023 >Rap guanine nucleotide ex; SWP:Q8TEU7; PDB:2D93A GSSGSSGDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVE 876542111000000000000000000000000000000000000 QAGAIILEDGQELDSWYVILNGTVEISHPDGKVENLFMGNSFGIT 000000000000000000000000000000000000000000000 PTLDKQYMHGIVRTKVDDCQFVCIAQQDYWRILNHVEKSGPSSG 00000000000000000000000000000000000112222357 >General transcription fac; SWP:Q9UHL9; PDB:2D99A GSSGSSGLRKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLA 543211000000000000000000000000000000000000000 VQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLKRPSSGPSSG 000000000000000000000000000000000000124567789 >Myb-related protein B; SWP:P48972; PDB:2D9AA GSSGSSGKVKWTHEEDEQLRALVRQFGQQDWKFLASHFPNRTDQQ 999865311000000000000000000000000000000000000 CQYRWLRVLSGPSSG 000000000013589 >General transcription fac; SWP:NA; PDB:2D9BA GSSGSSGMSVDAVEIETLRKTVEDYFCFCYGKALGKSTVVPVPYE 999864210000000000000000000000000000000000000 KMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGISFII 000000000000000000000000000000000000000000000 KRPFLEPKKHVGGSGPSSG 0000012445689999999 >Peregrin; SWP:NA; PDB:2D9EA GSSGSSGFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIK 753100000000000000000000000000000000000000000 KPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFY 000000000000000000000000000000000000000000000 RAAVRLREQGGAVLRQARRQAEKMGSGPSSG 0000000000000000000000001246799 >YY1-associated factor 2; SWP:NA; PDB:2D9GA GSSGSSGDEGYWDCSVCTFRNSAEAFKCMMCDVRKGTSTRKPRPV 999876421100000000000000000000000002356899999 SQSGPSSG 99999999 >Zinc finger protein 692; SWP:NA; PDB:2D9HA GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCG 876542212122222111111101100000001111100011111 KRFEKPDSVAAHRSKSHPALLLAPQESSGPSSG 110001110111111111111223356899999 >NEDD4-binding protein 2; SWP:NA; PDB:2D9IA GSSGSSGQNVLDLHGLHVDEALEHLMRVLEKKTEEFKQNGGKPYL 998654310000000000000000000000000000000000000 SVITGRGNHSQGGVARIKPAVIKYLISHSFRFSEIKPGCLKVMLK 000012333343211000000000000000000000000000000 SGPSSG 124699 >FLN29 gene product; SWP:NA; PDB:2D9KA GSSGSSGHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTEL 999999999997532100000000000000000000000000000 CGNCGRNVLVKDLKTHPEVCGREGSGPSSG 011110000000000000001234689999 >Zinc finger CCCH-type dom; SWP:NA; PDB:2D9MA GSSGSSGQYCWQHRFPTGYFSICDRYMNGTCPEGNSCKFAHGNAE 999765332100000000000000000000000000000000000 LHEWEERRDALKMKLNKASGPSSG 000000000000012356799999 >Cleavage and polyadenylat; SWP:NA; PDB:2D9NA GSSGSSGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYS 877542100000000000000000000000000000000000000 KFGECSNKECPFLHIDPESKIKDCPWSGPSSG 00000000000000000001122233456668 >DnaJ (Hsp40) homolog, sub; SWP:NA; PDB:2D9OA GSSGSSGQGTPKLKLKWKCKKEDESKGGYSKDVLLRLLQKYGEVL 999975320000000000012333211000000000000000000 NLVLSSKKPGTAVVEFATVKAAELAVQNEVGLVDNPLKISWLEGQ 000001100000000000000000000000000000000000000 PQDASGPSSG 0124679999 >Polyadenylate-binding pro; SWP:NA; PDB:2D9PA GSSGSSGDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSA 999987644321100000000000000000000000000000000 KVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 000011100000000000000000000000000000000000000 QRKEERQSGPSSG 1234678999999 >Tudor domain-containing p; SWP:NA; PDB:2D9TA GSSGSSGKVWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKF 998653100000000000000000000000000000000000000 TDYGNYEEVLLSNIKPVQTEAWVRDPNSGPSSG 000000000000000000124589999999999 >Pleckstrin homology domai; SWP:NA; PDB:2D9VA GSSGSSGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETA 998642000000000000111000000000000000000000010 QDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTVNLREGS 000000000000000000000011000000000000000000000 RLHLCAETRDDAIAWKTALMEANSTPAPAGATVPSGPSSG 0000000000000000000000000001246899999999 >Docking protein 2; SWP:NA; PDB:2D9WA GSSGSSGMGDGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCAL 999999875310000000000023221100000000000122321 ARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRDTSA 000000113345543311000000000000000111000010000 FFLETKERLYLLAAPAAERGDWVQAICLLAFSGPSSG 0000000000000000000000000000000023579 >Oxysterol binding protein; SWP:NA; PDB:2D9XA GSSGSSGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQ 987644210000000000000000000000000000000000000 SRNQKPRGTLQLAGAVISPSDEDSHTFTVNAASGEQYKLRATDAK 000000000000000000000000000000000000000000000 ERQHWVSRLQICTQHHTEAIGKNNSGPSSG 000000000000000000002479999999 >Pleckstrin homology domai; SWP:NA; PDB:2D9YA GSSGSSGNAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKD 998753211000000000000111100000000000000000000 EKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFS 000000000000100000000000100000000000110000000 AESPEEQEAWIQAMGEAARVQSGPSSG 000000000000000000012357899 >130-kDa phosphatidylinosi; SWP:NA; PDB:2DA0A GSSGSSGYGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHAT 764321000000000000011111000000000000000000123 SNRQPAKLNLLTCQVKPNAEDKKSFDLISHNRTYHFQAEDEQDYV 431100000000000000000100000000000000000000000 AWISVLTNSKEEALTMAFSGPSSG 000000000000000011357899 >Alpha-fetoprotein enhance; SWP:NA; PDB:2DA1A GSSGSSGKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSG 999999975311000000000000000000000000000000000 LPQKVIKHWFRNTLFKERQSGPSSG 0000000000000000001235689 >Alpha-fetoprotein enhance; SWP:NA; PDB:2DA2A GSSGSSGRSSRTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLN 999998753210000000000000000000000000000000000 LPTRVIVVWFQNARQKARKSGPSSG 0000000000000000002346899 >Alpha-fetoprotein enhance; SWP:NA; PDB:2DA3A GSSGSSGGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRK 999999999999875433210000000000000000000000000 MLDHIAHEVGLKKRVVQVWFQNTRARERKSGPSSG 00000000000000000000000000000235689 >Hypothetical protein DKFZ; SWP:NA; PDB:2DA4A GSSGSSGALQDRTQFSDRDLATLKKYWDNGMTSLGSVCREKIEAV 999999986432100000000000000000000000000000000 ATELNVDCEIVRTWIGNRRRKYRLMGIEVSGPSSG 00000000000000000000000011111235689 >Zinc fingers and homeobox; SWP:NA; PDB:2DA5A GSSGSSGPTKYKERAPEQLRALESSFAQNPLPLDEELDRLRSETK 999999976421000000000000000000000000000000000 MTRREIDSWFSERRKKVNAEETKKSGPSSG 000000000000000000011356889999 >SH3-domain kinase binding; SWP:NA; PDB:2DA9A GSSGSSGDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWW 976532000000000000000000000000000000000000000 EGELNGRRGVFPDNFVKLLSGPSSG 0000000000000000000135689 >Absent in melanoma 1 prot; SWP:NA; PDB:2DADA GSSGSSGQIHLFSEPQFQGHSQSFEETTSQIDDSFSTKSCRVSGG 996421000000000000000000000000000000000000000 SWVVYDGENFTGNQYVLEEGHYPCLSAMGCPPGATFKSLRFISGP 000000000000000000000000000000000000000000113 SSG 467 >FLJ35834 protein; SWP:NA; PDB:2DAFA GSSGSSGQESVEDSLATVKVVLIPVGQEIVIPFKVDTILKYLKDH 987655543321100000000000000000000000000000000 FSHLLGIPHSVLQIRYSGKILKNNETLVQHGVKPQEIVQVEIFST 000000000000000000000000000000000000000000000 NPDLYPVRRIDGLTDVSQIITVSGPSSG 0000000000123456999999999999 >Ubiquitin carboxyl-termin; SWP:NA; PDB:2DAGA GSSGSSGLDESVIIQLVEMGFPMDACRKAVYYTGNSGAEAAMNWV 998642100000000000000000000000000000000000000 MSHMDDPDFANPLILPGSSGPGSSGPSSG 00000000000001244579999999999 >Ubiquilin-3; SWP:NA; PDB:2DAHA GSSGSSGHFQVQLEQLRSMGFLNREANLQALIATGGDVDAAVEKL 999853110000000000000000000000000000000000000 RQSSGPSSG 000123468 >Ubiquitin associated doma; SWP:Q9BSL1; PDB:2DAIA GSSGSSGDAVELFKKANAMLDEDEDERVDEAALRQLTEMGFPENR 999999999999999999987653210000000000000000000 ATKALQLNHMSVPQAMEWLIEHAEDPTIDTPLSGPSSG 00000000000000000000000001112357999999 >KIAA0977 protein; SWP:Q53SF7; PDB:2DAJA GSSGSSGEKTVRVVINFKKTQKTIVRVSPHASLQELAPIICSKCE 998654210000000000000000000000000000000000000 FDPLHTLLLKDYQSQEPLDLTKSLNDLGLRELYAMDVNRESGPSS 000000000000110000000000000000000000013345778 G 9 >Ubiquitin carboxyl-termin; SWP:P45974; PDB:2DAKA GSSGSSGPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIF 986431000000000000000000000000000000000000000 SHIDDLDAEAAMSGPSSG 000124579999999999 >Protein KIAA0794; SWP:O94888; PDB:2DALA GSSGSSGGSAASSALKGLIQQFTTITGASESVGKHMLEACNNNLE 999999985420000000000000000000000000000000000 MAVTMFLDGGGSGPSSG 00000000125689999 >ETEA protein; SWP:NA; PDB:2DAMA GSSGSSGAPEERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHN 999999997532100000000000000000000000000000000 WNIEAAVQDRLNEQEGSGPSSG 0000000000001357999999 >WHSC1L1 protein, isoform; SWP:Q9BZ95; PDB:2DAQA GSSGSSGKLHYKQIVWVKLGNYRWWPAEICNPRSVPLNIQGLKHD 987643210000000000012210000000000000000000101 LGDFPVFFFGSHDYYWVHQGRVFPYVEGDKSFAEGQTSINKTFKK 100000000000000000000000000112221233433200000 ALEEAAKRFQELKASGPSSG 00000000000001136799 >Zinc finger MYM-type prot; SWP:Q9UJ78; PDB:2DASA GSSGSSGQPTAQQQLTKPAKITCANCKKPLQKGQTAYQRKGSAHL 999999999999986543100000000000011000000011000 FCSTTCLSSFSSGPSSG 00000000000236799 >Myosin-binding protein C,; SWP:Q00872; PDB:2DAVA GSSGSSGILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWF 876543210000000000000000000000000000000000000 KGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNY 000000000000000000000000000000000000000000000 RCEVTYKDKFDSCSFDLEVHESTGTTPNIDSGPSSG 000000010000000000000013468999999999 >RWD domain containing pro; SWP:Q9UIY3; PDB:2DAWA GSSGSSGMSASVKESLQLQLLEMEMLFSMFPNQGEVKLEDVNALT 987765421000000000000000000000001100000000000 NIKRYLEGTREALPPKIEFVITLQIEEPKVKIDLQVTMPHSYPYL 000000000010000000000000000000000000000000000 ALQLFGRSSELDRHQQLLLNKGLTSYIGTFDPGELCVCAAIQWLQ 000000000000000000000000000000000000000000000 DNSASYFLNRKLVSGPSSG 0000000123456789999 >Protein C21orf6; SWP:P57060; PDB:2DAXA GSSGSSGEQAEAQLAELDLLASMFPGENELIVNDQLAVAELKDCI 865432000000000000000000011000000000000000000 EKKTMEGRSSKVYFTINMNLDVSDEKMAMFSLACILPFKYPAVLP 000111110000000000000000000000000000000000000 EITVRSVLLSRSQQTQLNTDLTAFLQKHCHGDVCILNATEWVREH 000000000000000000000000000000000000000000000 ASGYVSRDTSSSGPSSG 00000124579999999 >InaD-like protein; SWP:Q8NI35; PDB:2DAZA GSSGSSGDAFTDQKIRQRYADLPGELHIIELEKDKNGLGLSLAGN 876532000000000000000000000000000000000000000 KDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQ 000000000000000000000000000000000000000000000 NASAIIKTAPSKVKLVFIRNEDAVNQMASGPSSG 0000000000000000000000000000001135 >heterogeneous nuclear rib; SWP:NA; PDB:2DB1A GSSGSSGMMLGPEGGEGYVVKLRGLPWSCSIEDVQNFLSDCTIHD 999986545665321000000000000000000000000000000 GVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYI 000000000000000000000000000000000000000000000 EVFKSHRTEMDWVLKHSGPNSASGPSSG 0000000000000000000123457899 >KIAA0890 protein; SWP:Q7L2E3; PDB:2DB2A GSSGSSGASRDLLKEFPQPKNLLNSVIGRALGISHAKDKLVYVHT 999986543100000000000000000000000000000000000 NGPKKKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQLFKGW 000000000000000000000000000000000000000000000 GLLGPRNELFDAAKYRVLADRFGSGPSSG 00000000000000000000001245689 >InaD-like protein; SWP:Q8NI35; PDB:2DB5A GSSGSSGLGNEDFNSVIQQMAQGRQIEYIDIERPSTGGLGFSVVA 987643211000000000000000000000000011100000000 LRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQN 000110000000000000000000110000000000000000000 ISHQQAIALLQQTTGSLRLIVAREPVHTKSSTSGPSSG 00000000000000000000000001345678999999 >SH3 and cysteine rich dom; SWP:Q96MF2; PDB:2DB6A GSSGSSGEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFG 999999876543211000000000000000000000000100000 LRCKNCKTNIHEHCQSYVEMQRCSGPSSG 00000000000000000001000123579 >Tripartite motif protein; SWP:Q9C026; PDB:2DB8A GSSGSSGPVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYI 976431000000000000122221000000000000010000000 LELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGV 000000000000000000000000000000000000000000000 SPYSKTLVLQTSEGSGPSSG 00000000000011234568 >Smooth muscle cell associ; SWP:NA; PDB:2DBAA GSSGSSGMTVSGPGTPEPRPATPGASSVEQLRKEGNELFKCGDYG 999999999999999999998542110000000000000000000 GALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASK 000000000000000000000000000000000000000000000 AIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVF 000000000000000000000000000000000000000000000 QEALRNISGPSSG 0000000013578 >unnamed protein product; SWP:Q78Y63; PDB:2DBCA GSSGSSGKFGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMC 998542000000000000000000000010000000000000000 LVVNQHLSVLARKFPETKFVKAIVNSCIEHYHDNCLPTIFVYKNG 000000000000000000000000111121111000000000000 QIEGKFIGIIECGGINLKLEELEWKLSEVGAIQSDLEENSGPSSG 000000000000000000000000000000000000124568999 >Myeloid cell nuclear diff; SWP:P41218; PDB:2DBGA GSSGSSGMVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTK 999986431000000000000000000000000000000000000 MQEEYNRIKITDLMEKKFQGVACLDKLIELAKDMPSLKNLVNNLR 000000000000000000000000000000000000000000000 KEKSKVASGPSSG 0000013568999 >golgi associated PDZ and; SWP:Q9HD26; PDB:2DC2A MKKSQGVGPIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPG --------0000000000000000000000000000000000000 QPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFE 000000000000000000000000000000000000000000000 VVYVALEHHHHHH 00001-------- >KIAA1915 protein; SWP:Q5VVJ2; PDB:2DCEA GSSGSSGHEEEELKPPEQEIEIDRNIIQEEEKQAIPEFFEGRQAK 999987654221000000000000000000000000000000000 TPERYLKIRNYILDQWEICKPKYLNKTSVRPGLKNCGDVNCIGRI 000000000000000000000000000000000111000000000 HTYLELIGAINFGCEQAVYNR 000000000000000000001 >Cytotoxic granule-associa; SWP:Q8CII5; PDB:2DGOA GSSGSSGQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 999987654210100000000000000000000000000000000 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 000000000000000000000000000000000000000000000 WATRKPPAPKSTYESNTKQSGPSSG 0012346899999999999999999 >Bruno-like 4, RNA binding; SWP:Q5R8W7; PDB:2DGPA GSSGSSGMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTV 987543211121000000000000000000000000000000000 LKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQV 000110010100000000000000000000000000000000000 KPADSESRGGSGPSSG 0001246799999999 >bruno-like 6, RNA binding; SWP:Q7TN33; PDB:2DGQA GSSGSSGVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYEL 865543210000000000000000000000000000000000000 TVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPI 000000000000000000000000000000000000000000000 QVKPAASEGRGESGPSSG 000001345689999999 >RING finger and KH domain; SWP:Q86XN8; PDB:2DGRA GSSGSSGGQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVT 988765200000000000000000000000000000000000000 PGRDKEPVFAVTGMPENVDRAREEIEAHITLRSGPSSG 00000000000000000000000000000001356899 >DAZ-associated protein 1; SWP:Q96EP5; PDB:2DGSA GSSGSSGSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYD 999986421000000000000000000000000000000000000 AEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 000000000000000000000000000000000000000002367 SKSSGPSSG 899999999 >RNA-binding protein 30; SWP:Q9BQ04; PDB:2DGTA GSSGSSGKASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIVKD 999975321000000000000000000000000000000000000 YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTASGPS 000000000000000000000000000000000012345688999 SG 99 >Heterogeneous nuclear rib; SWP:O60506; PDB:2DGUA GSSGSSGMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERVKKLK 987543221000000000000000000000000000000000000 DYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKER 000000000000000000000000000000000000012245899 KAQRQAASGPSSG 9999999999999 >Heterogeneous nuclear rib; SWP:P52272; PDB:2DGVA GSSGSSGACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENG 765432100000000000000000000000000000000000000 KSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNASGPS 000000000000000000000000000000000000000112467 SG 99 >Probable RNA-binding prot; SWP:Q9Y4C8; PDB:2DGWA GSSGSSGTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNA 999765431100000000000000000000000000000000012 HGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKSGPSS 211111000000000000000000000000000000000111234 G 6 >KIAA0430 protein; SWP:Q9Y4F3; PDB:2DGXA GSSGSSGNGADVQVSNIDYRLSRKELQQLLQEAFARHGKVKSVEL 999975310000000000000000000000000000000000000 SPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLATGA 000000000000000000000000000000000000000000123 SGPSSG 345678 >MGC11102 protein; SWP:Q9BSC1; PDB:2DGYA GSSGSSGEHIVPSNQQQIVRVLRTPGNNLHEVETAQGQRFLVSMP 999865310000000000000000000000000000000000000 SKYRKNIWIKRGDFLIVDPIEEGEKVKAEISFVLCKDHVRSLQKE 000000000000000000000000000000000000000000000 GFWPEAFSEVAEKHNSGPSSG 000000000001223568899 >DAZ-associated protein 1; SWP:NA; PDB:2DH8A GSSGSSGMNNSGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVD 999999997532110000000000000000000000000000000 CVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPK 000000000000000000000000000000000000000000000 PCTPRGMQPSGPSSG 000012356899999 >FLJ20171 protein; SWP:Q6NXG1; PDB:2DHAA GSSGSSGGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFFG 999998754200000000000000000000000000000000000 QHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKD 000000000000000000000000000000000000000000000 LLGKRYIELFRSTAAEVQQVLNRFSSASGPSSG 000000000000000000000000011245567 >tRNA selenocysteine assoc; SWP:Q5R462; PDB:2DHGA GSSGSSGPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD 988653210000000000000000000000000000000000000 QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 000000000000000000000000000000000000000000011 ASRVKPVESGPSSG 23456899999999 >Pleckstrin homology domai; SWP:Q9QZC7; PDB:2DHIA GSSGSSGFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQTR 975311000000000000000000000000000000000000000 QSIEDKVHMPVDCINIRTGHECRDIQPPDGKPRDCLLQIVCRDGK 000000000000000000000011000000000000000000110 TISLCAESTDDCLAWKFTLQDSRTSGPSSG 000000000000000000000001235679 >TBC1 domain family member; SWP:Q9BYX2; PDB:2DHKA GSSGSSGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRT 998754210000000001222210000000000000000000000 AQDANPLDSIDLSSAVFDCKADAEEGIFEIKTPSRVITLKAATKQ 000000000000000000000000000000000000000000000 AMLYWLQQLQMKRWEFHNSPPAPSGPSSG 00000000000000000001346999999 >Protein bolA; SWP:P0ABE2; PDB:2DHMA GSSGSSGMMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESH 976543210000000000000000000000011234556654320 FKVVLVSDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIK 000000000011111100000000000000000000000000000 EWEGLQDTVFASPPCRG 00001123345678999 >CUE domain-containing pro; SWP:Q9NWM3; PDB:2DHYA GSSGSSGRPARQVRRLEFNQAMDDFKTMFPNMDYDIIECVLRANS 999999999999764320000000000000000000000000000 GAVDATIDQLLQMNLESGPSSG 0000000000000002458999 >Rap guanine nucleotide ex; SWP:Q5R9B2; PDB:2DHZA GSSGSSGDEIFCRVYMPDHSYVTIRSRLSASVQDILGSVTEKLQY 986532100000000000000000000000000000000000001 SEEPAGREDSLILVAVSSSGEKVLLQPTEDCVFTALGINSHLFAC 245655431100000000000000000000000000000000000 TRDSYEALVPLPEEIQVSPGDTEISGPSSG 000000000000011222345667778889 >Activating signal cointeg; SWP:Q9H1I8; PDB:2DI0A GSSGSSGMCGVELDSLISQVKDLLPDLGEGFILACLEYYHYDPEQ 999864211000000000000000000000000000000000000 VINNILEERLAPTLSQLDRNLDREMN 00000000000000000000000135 >BK158_1; SWP:Q6UW63; PDB:2DI7A GSSGSSGETGGERQLSPEKSEIWGPGLKADVVLPARYFYIQAVDT 999999976311000000000000001111111110000000000 SGNKFTSSPGEKVFQVKVSAPEEQFTRVGVQVLDRKDGSFIVRYR 000000000000000000000111100000000001100000000 MYASYKNLKVEIKFQGQHVAKSPYILKGSGPSSG 1111110000000000000000000012345689 >Filamin-B; SWP:O75369; PDB:2DI8A GSSGSSGIGDARRAKVYGRGLSEGRTFEMSDFIVDTRDAGYGGIS 999753100000000000000000000000000000000000000 LAVEGPSKVDIQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVP 000000000000000000000000000000000000000000000 GSPFTVKISGEGRVKSGPSSG 000000000012245689999 >Filamin-B; SWP:O75369; PDB:2DI9A GSSGSSGDVTYDGHPVPGSPYTVEASLPPDPSKVKAHGPGLEGGL 999999999999999999876532210000000000000000000 VGKPAEFTIDTKGAGTGGLGLTVEGPCEAKIECSDNGDGTCSVSY 000000000000100000000000000000000000000000000 LPTKPGEYFVNILFEEVHIPGSPFKADIEMPFDPSSGPSSG 00000000000000000000000000000000123456799 >Filamin-B; SWP:O75369; PDB:2DIAA GSSGSSGPFDPSKVVASGPGLEHGKVGEAGLLSVDCSEAGPGALG 976432100000000000000000000000000000000000000 LEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGEL 000000000000000000110000000000000000000000000 VPHFPARVKVEPAVDTSSGPSSG 00000000000000234678899 >Filamin-B; SWP:O75369; PDB:2DIBA GSSGSSGHFPARVKVEPAVDTSRIKVFGPGIEGKDVFREATTDFT 999999998765432100000000000000000000000000000 VDSRPLTQVGGDHIKAHIANPSGASTECFVTDNADGTYQVEYTPF 000000000000000000000000000000000000000000000 EKGLHVVEVTYDDVPIPNSPFKVAVTEGCQPSSGPSSG 00000000000000000000000000001234567799 >Filamin-B; SWP:O75369; PDB:2DICA GSSGSSGGCQPSRVQAQGPGLKEAFTNKPNVFTVVTRGAGIGGLG 999864310000000000000000000000000000000010000 ITVEGPSESKINCRDNKDGSCSAEYIPFAPGDYDVNITYGGAHIP 000000000000000000000000000000000000000000000 GSPFRVPVKDVVDPS 000000000001234 >Tripartite motif protein; SWP:Q9HCM9; PDB:2DIDA GSSGSSGESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVV 877543210000000000000000000000000000000100000 PLSGPSSG 00135678 >Lamin-B receptor; SWP:Q14739; PDB:2DIGA GSSGSSGMPSRKFADGEVVRGRWPGSSLYYEVEILSHDSTSQLYT 999998643100000000000000000000000000000000000 VKYKDGTELELKENDIKSGPSSG 00000000000000000012457 >TFIIH basal transcription; SWP:P32780; PDB:2DIIA GSSGSSGFKRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAE 999877654321100000000000000000000000000000000 EFWANRLNVNSGPSSG 0000000234567789 >Zinc finger SWIM domain-c; SWP:Q8NEG5; PDB:2DIPA GSSGSSGLEEFKNSSKLVAAAEKERLDKHLGIPCNNCKQFPIEGK 999999999999999999997542222100000000000000000 CYKCTECIEYHLCQECFDSYCHLSHTFTFREKRNQKWRSLEKRAD 000000000000000000000000000000000000000001124 EVSGPSSG 67999999 >Tudor and KH domain-conta; SWP:Q9Y2W6; PDB:2DIQA GSSGSSGRSLQLDKLVNEMTQHYENSVPEDLTVHVGDIVAAPLPT 999753100000000000000000000000000000000000000 NGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALRSDFLS 000000000000000000000000000000000000000000000 LPFQAIECSLARIASGPSSG 00000001357999999999 >THUMP domain-containing p; SWP:Q9NXG2; PDB:2DIRA GSSGSSGKAFLEDMKKYAETFLEPWFKAPNKGTFQIVYKSRNNSH 976543100000000000000000000000000000000012211 VNREEVIRELAGIVCTLNSENKVDLTNPQYTVVVEIIKAVCCLSV 000000000000000000000000000000000000000000000 VKSGPSSG 00012356 >unnamed protein product; SWP:Q5RBZ7; PDB:2DISA GSSGSSGNCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASA 999853100000000000000000000000000000000001233 ADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAE 323332200000000000000000000000000000000000001 PEIDVDEDVMETVSGPSSG 2234677789999999999 >HIV TAT specific factor 1; SWP:Q5RB63; PDB:2DITA GSSGSSGGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRV 999999876442221000000000000000000000000000000 ECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFG 000000000000000000000000000000000000000000000 GRQITAQAWDGTTDYQSGPSSG 0000000000000000012357 >KIAA0430 protein; SWP:Q9Y4F3; PDB:2DIUA GSSGSSGCHTLLYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSIT 999975300000000000000000000000000000000000000 GCSAILRFINQDSAERAQKRMENEDVFGNRIIVSFTPKNRELCET 000000000000000000000000000000000000001234567 SGPSSG 899999 >TRNA selenocysteine assoc; SWP:NA; PDB:2DIVA GSSGSSGMAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRN 986542100000000000000000000000000000000000000 RLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNY 000000000000000000000000000000000000000000000 ATYSGPSSG 001247899 >Putative RNA-binding prot; SWP:Q80TJ3; PDB:2DIWA GSSGSSGDNMEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKA 998765421000000000000000000000000000000000000 IKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEK 000000000000000000000000000000000000000000000 DVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSE 000000000000000000000000000000000000000000000 IIQPLLDMAAGSGPSSG 00000000001245568 >Interferon-inducible doub; SWP:O75569; PDB:2DIXA GSSGSSGKTPIQVLHEYGMKTKNIPVYECERSDVQIHVPTFTFRV 998642000000000000000000000000000000000000000 TVGDITCTGEGTSKKLAKHRAAEAAINILKANASGPSSG 000000000000000000000000000000000013569 >Thioredoxin domain-contai; SWP:Q8NBS9; PDB:2DIZA GSSGSSGTVLALTENNFDDTIAEGITFIKFYAPWCGHCKTLAPTW 754211000000000000000000000000000000000000000 EELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLLFRGG 000000000000000000000000000000000000000000000 KKVSEHSGGRDLDSLHRFVLSQAKDEL 000000010000000000000000124 >Thioredoxin-related trans; SWP:Q561W0; PDB:2DJ0A GSSGSSGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFA 654321000000000000000000000000000000000000000 PIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLPT 000000000001110000000000000000000000001000000 LILFQGGKEAMRRPQIDKKGRAVSWTFSEENVIREFNLNELSGPS 000000000000000001100000000000000000000000123 SG 56 >Protein disulfide-isomera; SWP:P08003; PDB:2DJ1A GSSGSSGDDDLEVKEENGVWVLNDGNFDNFVADKDTVLLEFYAPW 998764322100000000000000000000000000000000000 CGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVS 000000000000000000000000000000000000000000000 GYPTIKILKKGQAVDYDGSRTQEEIVAKVREVSQPDWTPPPEVTS 000000000000000000000000000000000000000011234 GPSSG 66789 >Protein disulfide-isomera; SWP:P08003; PDB:2DJ2A GSSGSSGVTLSLTKDNFDDVVNNADIILVEFYAPWCGHCKKLAPE 765431000000000000000000000000000000000000000 YEKAAKELSKRSPPIPLAKVDATEQTDLAKRFDVSGYPTLKIFRK 000000000000000000000000000000000000000000000 GRPFDYNGPREKYGIVDYMIEQSGSGPSSG 000000000000000000000000124689 >Protein disulfide-isomera; SWP:P08003; PDB:2DJ3A GSSGSSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEP 655331000000000000000000000000000000000000000 IYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTIYFAPS 000000000000000000000000000000000000000000000 GDKKNPIKFEGGNRDLEHLSKFIDEHATKRSRTKEELSGPSSG 0000000000100000000000000001235799999999999 >Filamin-B; SWP:O75369; PDB:2DJ4A GSSGSSGVVDPSKVKIAGPGLGSGVRARVLQSFTVDSSKAGLAPL 865432100000000000000000000000000000000000000 EVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADE 000000000000000000000000000000000000000000000 EIPRSPFKVKVLPTYDAS 000000000000000123 >Actin-binding LIM protein; SWP:O94929; PDB:2DJ7A GSSGSSGKPIKIRGPSHCAGCKEEIKHGQSLLALDKQWHVSCFKC 999998765544321000000000012200000000000000000 QTCSVILTGEYISKDGVPYCESDYHAQFGSGPSSG 00000000000000000000000000000124689 >Protein CBFA2T1; SWP:Q06455; PDB:2DJ8A GSSGSSGINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHK 999998766544331000000000000000000000000000000 DWEKHHHICSGPSSG 000000000000134 >Midline-2; SWP:NA; PDB:2DJAA GSSGSSGVEPVPDTHLRGITCLDHENEKVNMYCVSDDQLICALCK 999999999999987543100000000000000000000000000 LVGRHRDHQVASLNDRFEKLKQTLEMNLTNLVKSGPSSG 000000000000123567999999999999999999999 >Protein disulfide-isomera; SWP:NA; PDB:2DJJA GPLGSEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAP 998642000000000000000000000000000000000000000 KYEELGALYAKSEFKDRVVIAKVDATANDVPDEIQGFPTIKLYPA 000000000000000000000000000000000010000000000 GAKGQPVTYSGSRTVEDLIKFIAENGKYKAA 0000000000000000000000000000000 >Protein disulfide-isomera; SWP:NA; PDB:2DJKA GPLGSPLIGEIGPETYSDYMSAGIPLAYIFAETAEERKELSDKLK 999743100000000000000000000000000000000000000 PIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQEVAKN 000000000000000000000000000000000000000000000 QKFPFDQEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEKQEG 0000000000000000000000000000001113589999999 >Homeobox protein DLX-5; SWP:NA; PDB:2DJNA GSSGSSGRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLG 999987653210000000000000000000000000000000000 LTQTQVKIWFQNKRSKIKKSGPSSG 0000000000000000123579999 >Hypothetical protein SB14; SWP:NA; PDB:2DJPA GSSGSSGCSPVRERRLEHQLEPGDTLAGLALKYGVTMEQIKRANR 999999975431100000000000000000000000000000000 LYTNDSIFLKKTLYIPILTEPRDLFNSGPSSG 00000000000000000001224578999999 >SH3 domain containing rin; SWP:NA; PDB:2DJQA GSSGSSGPRAKALCNYRGKNPGDLKFNKGDVILLRRQLDENWYQG 976532000000000000000000000000000000000000000 EINGVSGIFPASSVEVISGPSSG 00000000000000000013468 >Zinc finger BED domain-co; SWP:NA; PDB:2DJRA GSSGSSGSEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRGPGVN 864321000000000000122211100000000000000012211 VGTTALWKHLKSMHREELEKSGHGQSGPSSG 1000000000000000000001111123455 >Ephrin type-B receptor 1; SWP:NA; PDB:2DJSA GSSGSSGPSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRY 654321000000000000000000000000000000000000000 YEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGK 000000000000000000000000000000000000000000000 FSGKMCFQTLTDSGPSSG 000000000000123456 >unnamed protein product; SWP:NA; PDB:2DJTA GSSGSSGQASGHFSVELVRGYAGFGLTLGGGRDVAGDTPLAVRGL 999876543200000000001100000000000010000000000 LKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQL 000000000000000000000000000000000000000000000 HLVIRRPLSGPSSG 00000001224579 >Receptor-type tyrosine-pr; SWP:NA; PDB:2DJUA GSSGSSGPKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRA 543321000000000000000000000000000000000000000 AGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPS 001110000000000000000000000000000000000000000 EAVRARTGEQSGPSSG 0000000001112356 >Methionyl-tRNA synthetase; SWP:NA; PDB:2DJVA GSSGSSGTTAKPQQIQALMDEVTKQGNIVRELKAQKADKNEVAAE 876644321000000000000000000000000000000000000 VAKLLDLKKQLAVAEGKPPEAPKGKKKKSGPSSG 0000000000000000012234678999999999 >WW domain-binding protein; SWP:NA; PDB:2DK1A GSSGSSGRWVEGITSEGYHYYYDLISGASQWEKPEGFQGDLKKTS 976431000000000000000000000000000000012245679 GPSSG 99999 >Heterogeneous nuclear rib; SWP:NA; PDB:2DK2A GSSGSSGDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERV 987543211100110000000000000000000000000000000 KKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKK 000000000000000000000000000000000000000011235 RSGPSSG 6899999 >E3 ubiquitin-protein liga; SWP:NA; PDB:2DK3A GSSGSSGVRSQVLKYMVPGARVIRGLDWKWRDQDGSPQGEGTVTG 998654310000000000000000000000100111110000000 ELHNGWIDVTWDAGGSNSYRMGAEGKFDLKLAPGYSGPSSG 00000000000001000000000000000000000101134 >Pre-mRNA-splicing factor; SWP:NA; PDB:2DK4A GSSGSSGTSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRL 999999999999999987653211000000000000000000000 FGETDYDAFQRLRKIEILTPEVNKGSGPSSG 0000000000000000000123568999999 >DNA-directed RNA polymera; SWP:NA; PDB:2DK5A GSSGSSGDSQNAGKMKGSDNQEKLVYQIIEDAGNKGIWSRDVRYK 999999999876543332100000000000000000000000000 SNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYMLYNLSGPSS 000000000000000000000000001121000000000011235 G 7 >DNA-directed RNA polymera; SWP:NA; PDB:2DK8A GSSGSSGPDADPVEIENRIIELCHQFPHGITDQVIQNEMPHIEAQ 999976421000000000000000000000000000000000000 QRAVAINRLLSMGQLDLLRSNTGLLYRIKDSGPSSG 000000000000000000001100000001246899 >NEDD9-interacting protein; SWP:NA; PDB:2DK9A MGHHHHHHMGSAGTQEELLRWCQEQTAGYPGVHVSDLSSSWADGL 999997532111000000000000000000000000000000000 ALCALVYRLQPGLLEPSELQGLGALEATAWALKVAENELGITPVV 000000000000000000000000000000000000000000000 SAQAVVAGSDPLGLIAYLSHFHSAFKSM 0000000000000000000000000011 >Trinucleotide Repeat Cont; SWP:NA; PDB:2DKLA GSSGSSGGMKTSGKQDEAWIMSRLIKQLTDMGFPREPAEEALKSN 999999999975320000000000000000000000000000000 NMNLDQAMSALLEKKVDVDKRGLGVTDHNGMAAKSGPSSG 0000000000000011233333346799999999999999 >Collagen alpha-1(XX) chai; SWP:NA; PDB:2DKMA GSSGSSGPLPPPRALTLAAVTPRTVHLTWQPSAGATHYLVRCSPA 999865210000000000000000000000000000000000000 SPKGEEEEREVQVGRPEVLLDGLEPGRDYEVSVQSLRGPEGSEAR 011222100000000000000000000000000000000000000 GIRARTPTSGPSSG 00000000013469 >Pleckstrin homology domai; SWP:NA; PDB:2DKPA GSSGSSGKRSNSIKRNPNAPVVRRGWLYKQDSTGMKLWKKRWFVL 999998754211000000000000000000111110000000000 SDLCLFYYRDEKEEGILGSILLPSFQIALLTSEDHINRKYAFKAA 000000000000000000000000000000010110110000000 HPNMRTYYFCTDTGKEMELWMKAMLDAALVQTSGPSSG 00000000000000000000000000000001234579 >KIAA1075 protein; SWP:NA; PDB:2DKQA GSSGSSGMSTAADLLRQGAACSVLYLTSVETESLTGPQAVARASS 999987643211000000000000000000000000000000000 AALSCSPRPTPAVVHFKVSAQGITLTDNQRKLFFRRHYPVNSITF 000000000000000000000000000000000100000000000 SSTDPQDRRWTNPDGTTSKIFGFVAKKPGSPWENVCHLFAELDPD 000000000000111000000000000100000000000000000 QPAGAIVTFITKVLLGQRKSGPSSG 0000000000000001357999999 >LIN-7 homolog B; SWP:NA; PDB:2DKRA GSSGSSGVVELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADR 653211000000000000000000001110000000000000000 HGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVKLVVRSGP 000000000000000000000000000000000000000000013 SSG 468 >RING finger and CHY zinc; SWP:NA; PDB:2DKTA GSSGSSGGVRNLAQGPRGCEHYDRACLLKAPCCDKLYTCRLCHDT 999999998776532100000000000000000000000000000 NEDHQLDRFKVKEVQCINCEKLQHAQQTCEDCSTLFGEYYCSICH 000000000000000000000000000000000000000000000 LFDKDKRQYHCESCGICRIGPKEDFFHCLKCNLCLTTNLRGKHKC 000000000000000000000000000000000000000111111 IESGPSSG 12346899 >KIAA1556 protein; SWP:NA; PDB:2DKUA GSSGSSGANCFTEELTNLQVEEKGTAVFTCKTEHPAATVTWRKGL 987543100000000000000000000000000000000000000 LELRASGKHQPSQEGLTLRLTISALEKADSDTYTCDIGQAQSRAQ 000000000000001000000000000000000000000000000 LLVQGRRSGPSSG 0000001246899 >hypothetical protein KIAA; SWP:NA; PDB:2DKWA GSSGSSGNTLRELRLFLRDVTKRLATDKRFNIFSKPVSDYLEVIK 976321000000000000000000000000000000011111100 EPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYNPDKDPGD 000000000000000000000000000000000000111221110 KIIRHRACTLKDTAHAIIAAELDPEFNKLCEEIKESGPSSG 00000000000000000000000000000000001124689 >SAM pointed domain-contai; SWP:NA; PDB:2DKXA GSSGSSGLKDIETACKLLNITADPMDWSPSNVQKWLLWTEHQYRL 764321000000000000000000000000000000000000000 PPMGKAFQELAGKELCAMSEEQFRQRSPLGGDVLHAHLDIWKSAA 000000000000000000000000000000000000000000000 SGPSSG 002356 >hypothetical protein LOC6; SWP:NA; PDB:2DKZA GSSGSSGPWQPPADLSGLSIEEVSKSLRFIGLSEDVISFFVTEKI 999864210000010000000000000000000000000000000 DGNLLVQLTEEILSEDFKLSKLQVKKIMQFINGSGPSSG 000000000000000000000000000000000124578 >SAM and SH3 domain-contai; SWP:NA; PDB:2DL0A GSSGSSGGGLTEICRKPVSPGCISSVSDWLISIGLPMYAGTLSTA 999999999999999976421000000000000000000000000 GFSTLSQVPSLSHTCLQEAGITEERHIRKLLSAARLFKLPPGPEA 000000000000000000000000000000000000000011345 MSGPSSG 6899999 >Spartin; SWP:NA; PDB:2DL1A GSSGSSGEPAEIKIIREAYKKAFLFVNKGLNTDELGQKEEAKNYY 999753211000000000000000000000000000000000000 KQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTR 000000000000011122221110000000000000000000000 LEILEKGLATSLQNDLQEVPSGPSSG 00000011357999999999999999 >Sorbin and SH3 domain-con; SWP:NA; PDB:2DL3A GSSGSSGRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEG 655431000000000000000000000000000000000000000 EHHGRVGIFPRTYIELLSGPSSG 00000000000000000124579 >Protein Stac; SWP:NA; PDB:2DL4A GSSGSSGNTYVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKG 765432000000000000000000000000000000000000000 KIQDRIGFFPANFVQRLSGPSSG 00000000000000000124689 >KIAA0769 protein; SWP:NA; PDB:2DL5A GSSGSSGTLRNYPLTCKVVYSYKASQPDELTIEEHEVLEVIEDGD 999987532000000000000000000000000000000000000 MEDWVKARNKVGQVGYVPEKYLQFPTSSGPSSG 010000000000000000000000012578899 >Chromodomain-helicase-DNA; SWP:NA; PDB:2DL6A GSSGSSGEPNHLDVDLETRIPVINKVDGTLLVGEDAPRRAELEMW 999999997532110000000000000000000000000000000 LQGHPEFAVDPRFLAYMEDRRKQKWQRCKKNNSGPSSG 00000000000000000000011245678999999999