>Igk-C protein; SWP:Q58EU4; PDB:12E8L; DIVMTQSQKFMSTSVGDRVSITCKASQNVGTAVAWYQQKPGQSPKLMIYSASNRYTGVPD ----------------------1------------------------------------- RFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGAGTKLELKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSATDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >T4 LYSOZYME; SWP:P00720; PDB:152L; MNCFEMLRCDEGLRLKIYKDCEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITK --1-----2-----------3--------------------------------------- DEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRM ------------------------------------1----------------------- LQQKRWDEAAVNLAKSRWYNQCPNRAKRVITTFRTGTWDAYKNC ---------------------3---------------------2 >MEIZOTHROMBIN; SWP:P00735; PDB:1A0HA; SPLLETCVPDRGREYRGRLAVTTHGSRCLAWSSEQAKALSKDQDFNPAVPLAENFCRNPD ------1--------------------2---------------------------3---- GDEEGAWCYVADQPGDFEYCDLNYCEEPVDGDLGDRLGEDPDP -------2-----------3----1------------------ >Prothrombin [Precursor]; SWP:P00735; PDB:1A0HB; IVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLL ---------------------------1---------------1---------------- VRIGKHSRTRYERKVEKISMLDKIYIHPRYNWKENLDRDIALLKLKRPIELSDYIHPVCL ------------------------------------------------------------ PDKQTAAKLLHAGFKGRVTGWGNRRETWTTSVAEVQPSVLQVVNLPLVERPVCKASTRIR ----------------------------------------------------2------- ITDNMFCAGYKPGEGKRGDACEGDSGGPFVMKSPYNNRWYQMGIVSWGEGCDRDGKYGFY ------2-------------3-----------------------------3--------- THVFRLKKWIQKVIDRLGS ------------------- >29G11 FAB; SWP:NA; PDB:1A0QL; IELTQSPSSLSASLGGKVTITCKASQDIKKYIGWYQHKPGKQPRLLIHYTSTLLPGIPSR ---------------------1-------------------------------------- FRGSGSGRDYSFSISNLEPEDIATYYCLQYYNLRTFGGGTKLEIKRADAAPTVSIFPPSS --------------------------1--------------------------------- EQLTSGGASVVCFLNNFYSKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT -----------2------------------------------------------------ KDEYERHNSYTCEATHKTSTSPIVKSFNRNE -----------2------------------- >Ig kappa chain V-V region; SWP:P01645; PDB:1A14L; DIELTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQNPDGTVKLLIYYTSNLHSEVPS ----------------------1------------------------------------- RFSGSGSGTDYSLTISNLEQEDIATYFCQQDFTLPFTFGGGTAA ---------------------------1---------------- >TISSUE FACTOR; SWP:P24055; PDB:1A21A; TGRAYNLTWKSTNFKTILEWEPKSIDHVYTVQISTRLENWKSKCFLTAETECDLTDEVVK -------------------------------------------1-------1-------- DVGQTYMARVLSYPARNTTGFPEEPPFRNSPEFTPYLDTNLGQPTIQSFEQVGTKLNVTV ------------------------------------------------------------ QDARTLVTFLSLRAVFGKDLNYTLYYWRKKTATTNTNEFLIDVDKGENYCFSVQAVIPSR -------------------------------------------------2---------- KRKQRSPESLTECT ------------2- >GROWTH HORMONE; SWP:P01241; PDB:1A22A; FPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSLCFSESIPT ----------------------------------------------------1------- PSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEER ------------------------------------------------------------ IQTLMGRLEGQIFKQTYSKFDTDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF ---------------------------------1----------------2------2-- >Growth hormone receptor [; SWP:P10912; PDB:1A22B; PKFTKCRSPERETFSCHWTLGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFT -----1---------1-------------------------2----------2------- SIWIPYCIKLTSNGGTVDEKCFSVDEIVQPDPPIALNWTLLNGIHADIQVRWEAPRNADI ------3-------------3--------------------------------------- QKGWMVLEYELQYKEVNETKWKMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEF ------------------------------------------------------------ SEVLYVTLPQMS ------------ >METHYLAMINE OXIDASE; SWP:P12807; PDB:1A2VA; PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPR ------------------------------------------------------------ LAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQ ------------------------------------------------------------ CVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVD ------------------------------------------------------------ TEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGN ------------------------------------------------------------ VMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHA ------------------------------------------------------------ LDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHS --------------------1-------------------------1------------- DFRDNFATSLVTRATKLVVSQIFTAANEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDE ------------------------------------------------------------ EAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAF ------------------------------------------------------------ YSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSL ------------------------------------------------------------ VAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFH ------------------------------------------------------------ TFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV ------------------------------------------------------ >MONOCLONAL ANTIBODY D1.3; SWP:P01635; PDB:1A2YA; DIVLTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYYTTTLADGVPS ----------------------1------------------------------------- RFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPRTFGGGTKLEIK ---------------------------1------------------- >Ig heavy chain V region P; SWP:P01820; PDB:1A2YB; QVQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYN ---------------------1-------------------------------------- SALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERDYRLDYWGQGTTLTVSS ----------------------------------1--------------------- >PHOSPHOLIPASE A2; SWP:P15445; PDB:1A3D; NLYQFKNMIKCTVPSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKISGC ----------1--------------2-3--------------43-----5---------6 WPYFKTYSYECSQGTLTCKGDNNACAASVCDCDRLAAICFAGAPYNDNNYNIDLKARCQ ----------1------7------6----7-5------4------------------2- >IMMUNOGLOBULIN, DIELS ALD; SWP:NA; PDB:1A4JH; QVQLLESGPELKKPGETVKISCKASGYTFTNYGMNWVKQAPGKGLKWMGWINTYTGEPTY ---------------------1-------------------------------------- ADDFKGRFAFSLETSASTAYLQINNLKNEDTATYFCVQAERLRRTFDYWGAGTTVTVSSA -----------------------------------1------------------------ STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSG -------------------------2---------------------------------- LYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV ---------------------2--------------- >Ig kappa chain C region; SWP:KAC_HUMAN; PDB:1A4JL; ELVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRF ----------------------1------------------------------------- SGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPPTFGGGTKLEIKRTVAAPSV --------------------------------1--------------------------- FIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSL ------------------2----------------------------------------- SSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG ------------------2------------------ >MONOCLONAL ANTI-E-SELECTI; SWP:NA; PDB:1A5FH; EVALQQSGAELVKPGASVKLSCAASGFTIKDAYMHWVKQKPEQGLEWIGRIDSGSSNTNY ---------------------1-------------------------------------- DPTFKGKATITADDSSNTAYLQMSSLTSEDTAVYYCARVYAMDYWGQGTSVTVSSAKTTP -----------------------------------1------------------------ PSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLS ---------------------2-------------------------------------- SSVSVPTSTETVTCNVAHAPSSTKVDKKIVPR -------------2------------------ >HLA-DR3; SWP:P01903; PDB:1A6AA; HVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIA ------------------------------------------------------------ VDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRN ------------------------------------------1----------------- GKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEF --------------------------------------1----------------- >HLA class II histocompati; SWP:P01912; PDB:1A6AB; PRFLEYSTSECHFFNGTERVRYLDRYFHNQEENVRFDSDVGEFRAVTELGRPDAEYWNSQ ----------1------------------------------------------------- KDLLEQKRGRVDNYCRHNYGVVESFTVQRRVHPKVTVYPSKTQPLQHHNLLVCSVSGFYP --------------1-------------------------------------2------- GSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPL ------------------------------------------------2----------- TVEWRAR ------- >FAB1-IA; SWP:Q5XFY8; PDB:1A6TA; QSVLSQSPAILSASPGEKVIMTCSPSSSVSYMQWYQQKPGSSPKPWIYSTSNLASGVPGR ----------------------1------------------------------------- FSGGGSGTSFSLTISGVEAEDAATYYCQQYSSHPLTFGGGTKLELKRADAAPTVSIFPPS --------------------------1--------------------------------- SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTL ------------2----------------------------------------------- TKDEYERHNSYTCEATHKTSTSPIVKSFNR ------------2----------------- >Ig heavy chain V region B; SWP:P01751; PDB:1A6VH; QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKY ---------------------1-------------------------------------- NEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTV -----------------------------------1---------------------- >HFE; SWP:Q30201; PDB:1A6ZA; RSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVFYDHESRRVEPRTPWVSSRISSQMWL ------------------------------------------------------------ QLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQVILGCEMQEDNSTEGYWKYGYDGQDH --------------------------------------1--------------------- LEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQ -----------------------------------------1------------------ VPPLVKVTHHVTSSVTTLRCRALNYYPQNITMKWLKDKQPMDAKEFEPKDVLPNGDGTYQ -------------------2---------------------------------------- GWITLAVPPGEEQRYTCQVEHPGLDQPLIVIW ----------------2--------------- >PARVALBUMIN; SWP:P02621; PDB:1A75A; AGILADADCAAAVKACEAADSFSYKAFFAKCGLSGKSADDIKKAFVFIDQDKSGFIEEDE --------1---------------------1----------------------------- LKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEEWVALVKA ---------------------------------------------- >Ig heavy chain V region P; SWP:P01820; PDB:1A7QH; QVQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQLPGKGLEWLGMIWGDGNTAYN ---------------------1-------------------------------------- SALKSRLSISKDNSKSQVFLEMDSLHTDDTARYYCARERDYRLDYWGQGTTVTVSS ----------------------------------1--------------------- >Ig kappa chain V-V region; SWP:P01635; PDB:1A7QL; DIVLTQSPASLSASVGETVTITCRAGGNTHNYLAWYQQKQGKSPQLLVYYTTTLAAGVPS ----------------------1------------------------------------- RFSGSGSGTQYSLKINSLQPDDFGSYYCQHFWSTPRSFGGGTKLEI ---------------------------1------------------ >HEPARIN BINDING PROTEIN; SWP:P20160; PDB:1A7S; IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFPGVSTVVLGAYDLRRRE -------------------------1---------------1------------------ RQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQ ----------------------------------------------------------2- VAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRPNNVCTGVLTRRGGICNGDGGTPLVCEGL -----------------------------3-----3----------4---------2--- AHGVASFSLGPCGRGPDFFTRVALFRDWIDGVLNNPGPGPA -----------4----------------------------- >TETANUS NEUROTOXIN; SWP:P04958; PDB:1A8D; MKNLDCWVDNEEDIDVILKKSTILNLDINNDIISDISGFNSSVITYPDAQLVPGINGKAI -----1------------------------------------------------------ HLVNNESSEVIVHKAMDIEYNDMFNNFTVSFWLRVPKVSASHLEQYGTNEYSIISSMKKH ------------------------------------------------------------ SLSIGSGWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSS ------------------------------------------------------------ ANLYINGVLMGSAEITGLGAIREDNNITLKLDRCNNNNQYVSIDKFRIFCKALNPKEIEK -------------------------------------------------1---------- LYTSYLSITFLRDFWGNPLRYDTEYYLIPVASSSKDVQLKNITDYMYLTNAPSYTNGKLN ------------------------------------------------------------ IYYRRLYNGLKFIIKRYTPNNEIDSFVKSGDFIKLYVSYNNNEHIVGYPKDGNAFNNLDR ------------------------------------------------------------ ILRVGYNAPGIPLYKKMEAVKLRDLKTYSVQLKLYDDKNASLGLVGTHNGQIGNDPNRDI ------------------------------------------------------------ LIASNWYFNHLKDKILGCDWYFVPTDEGWTND -------------------------------- >PROTEIN DISULFIDE OXIDORE; SWP:Q51760; PDB:1A8L; MGLISDADKKVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSELTDKLSYEIV ----------------------------------1--1---------------------- DFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLPAGHEFAAFLEDIVDVSREETN ------------------------------------------------------------ LMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE -------------------------2--2------------------------------- YPEWADQYNVMAVPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSALS ---------------------------------------------- >HIV CAPSID; SWP:P12493; PDB:1A8O; DIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWTETLLVQNANPDCKTILKALGPGATLE ---------------------------------------------1-------------- ETACQG ---1-- >PUTRESCINE-BINDING PROTEI; SWP:P31133; PDB:1A99A; QKTLHIYNWSDYIAPDTVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASF ------------------------------------------------------------ LERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVK ------------------------------------------------------------ AVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTG --------------------------1--------------------------------- PATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSI ------------------------------1----------------------------- PKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAE ------------------------------------------------------------ VRENPGIYPPADVRAKLFTLKVQDPKIDRVRTRAWTKVKSG ----------------------------------------- >ALZHEIMER'S DISEASE AMYLO; SWP:P05067; PDB:1AAPA; VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG ----1--------2---------------3-------2------------3---1- >GLUTAREDOXIN; SWP:P00276; PDB:1ABA; MFKVYGYDSNIHKCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQ -------------1--1------------------------------------------- IGLTMPQVFAPDGSHIGGFDQLREYFK --------------------------- >Abrin-a [Precursor]; SWP:P11140; PDB:1ABRB; IVEKSKICSSRYEPTVRIGGRDGMCVDVYDNGYHNGNRIIMWKCKDRLEENQLWTLKSDK ------------------------1------------------1---------------- TIRSNGKCLTTYGYAPGSYVMIYDCTSAVAEATYWEIWDNGTIINPKSALVLSAESSSMG -------2----------------2----------------------------------- GTLTVQTNEYLMRQGWRTGNNTSPFVTSISGYSDLCMQAQGSNVWMADCDSNKKEQQWAL -----------------------------------3------------3----------- YTDGSIRSVQNTNNCLTSKDHKQGSTILLMGCSNGWASQRWVFKNDGSIYSLYDDMVMDV --------------4----------------4---------------------------- KGSDPSLKQIILWPYTGKPNQIWLTLF --------------------------- >GLUCOAMYLASE; SWP:P69328; PDB:1AC0; CTTPTAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVT 1----------------------------------------------------------- LPAGESFEYKFIRIESDDSVEWESDPNREYTVPQACGTSTATVTDTWR -----------------------------------1------------ >KEX1(DELTA)P; SWP:P09620; PDB:1AC5; LPSSEEYKVAYELLPGLSEVPDPSNIPQMHAGHIPLRSEDADEQDSSDLEYFFWKFTNND ------------------------------------------------------------ SNGNVDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPT ------------------1----------------------------------------- GTGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQ ------------------------------------------------------------ YIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWIDPNTQSLSYLPFAMEKKLIDESNPN ------------------------------------------------------------ FKHLTNAHENCQNLINSASTDEAAHFSYQECENILNLLLSYTRESSQKGTADCLNMYNFN ----------2-------------------2---------------------3------- LKDSYPSCGMNWPKDISFVSKFFSTPGVIDSLHLDSDKIDHWKECTNSVGTKLSNPISKP -------3------------------------------------1--------------- SIHLLPGLLESGIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSK ------------------------------------------------------------ STDDSEEFSGYVKYDRNLTFVSVYNASHMVPFDKSLVSRGIVDIYSNDVMIIDNNGKNVM ------------------------------------------------------------ ITT --- >T-CELL RECEPTOR ALPHA; SWP:P06323; PDB:1AC6A; DSVTQTEGQVALSEEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRG ---------------------1-------------------------------------- FEATYNKEATSFHLQKASVQESDSAVYYCALSGGNNKLTFGAGTKLTIKP ----------------------------1--------------------- >NATURAL SCORPION PEPTIDE ; SWP:P56215; PDB:1ACW; VSCEDCPEHCSTQKAQAKCDNDKCVCEPI --1--2---3--------1----2-3--- >IGG4 REA; SWP:P01861; PDB:1ADQA; PSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPQVQFNWYVDGVQVHNAKTKPREQQFN -----------------------1------------------------------------ STYRVVSVLTVLHQNWLDGKEYKCKVSNKGLPSSIEKTISKAKGQPREPQVYTLPPSQEE -----------------------1------------------------------------ MTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSRLTVDKSRW ---------2-------------------------------------------------- QEGNVFSCSVMHEALHNHYTQKSLSL -------2------------------ >IGL@ protein; SWP:Q8N355; PDB:1ADQL; YVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPPGIPERF --------------------1--------------------------------------- SGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDH -------------------------1--------- >PHOSPHOLIPASE A2; SWP:P00608; PDB:1AE7; NLVQFSYLIQCANHGKRPTWHYMDYGCYCGAGGSGTPVDELDRCCKIHDDCYDEAGKKGC ----------1---------------2-3--------------43-----5--------6 FPKMSAYDYYCGENGPYCRNIKKKCLRFVCDCDVEAAFCFAKAPYNNANWNIDTKKRCQ ----------1------7------6----7-5------4------------------2- >ACTINIDIN; SWP:P00785; PDB:1AEC; LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQ ---------------------1---------------------------------2---- NTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNN ----1--------------------------------2---------------------- EWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIV -----------------------------------3------------------------ KNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPVKY -------------------------3------------ >ANTIBODY FAB25.3 FRAGMENT; SWP:NA; PDB:1AFVH; QVQLQQPGSVLVRPGASVKLSCKASGYTFTSSWIHWAKQRPGQGLEWIGEIHPNSGNTNY ---------------------1-------------------------------------- NEKFKGKATLTVDTSSSTAYVDLSSLTSEDSAVYYCARWRYGSPYYFDYWGQGTTLTVSS -----------------------------------1------------------------ AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSD --------------------------2--------------------------------- LYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPK ---------------------2------------------ >CONOTOXIN GS; SWP:P15472; PDB:1AG7; ACSGRGSRCQCCMGLRCGRGNPQKCIGAHDV -1------2-31----2-------3------ >ALDEHYDE DEHYDROGENASE; SWP:P20000; PDB:1AG8A; VPTPNQQPEVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAAR ------------------------------------------------------------ AAFQLGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLK ------------------------------------------------------------ CLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGN ------------------------------------------------------------ VVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGST ------------------------------------------------------------ EVGHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSR -----------------------------------------------------1-1---- TFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKL ------------------------------------------------------------ LCGGGAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGL ------------------------------------------------------------ AAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTE ------------------------------------------------------------ VKTVTVRVPQKNS ------------- >OMEGA-AGATOXIN-IVB; SWP:P37045; PDB:1AGG; EDNCIAEDYGKCTWGGTKCCRGRPCRCSMIGTNCECTPRLIMEGLSFA ---1-------2------31----2-4------4-3------------ >ANGIOGENIN; SWP:P10152; PDB:1AGI; AQDDYRYIHFLTQHYDAKPKGRNDEYCFNMMKNRRLTRPCKDRNTFIHGNKNDIKAICED --------------------------1------------2-----------------3-- RNGQPYRGDLRISKSEFQITICKHKGGSSRPPCRYGATEDSRVIVVGCENGLPVHFDESF ---------------------1----------2--------------3------------ ITPRH ----- >GLIAL CELL-DERIVED NEUROT; SWP:Q07731; PDB:1AGQA; NRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCEAAETMYDKILKNLSRSRVGQACCR ---1--------------------------2---3-----------------------1- PVAFDDDLSFLDDSLVYHILRKHSAKRCGCI ---------------------------2-3- >AGITOXIN 2; SWP:P46111; PDB:1AGT; GVPINVSCTGSPQCIKPCKDAGMRFGKCMNRKCHCTPK -------1-----2---3---------1----2-3--- >ANTHOPLEURIN-A; SWP:P01530; PDB:1AHL; GVSCLCDSDGPSVRGNTLSGTLWLYPSGCPSGWHNCKAHGPTIGWCCKQ ---1-2----------------------3------2---------13-- >TOXIN II; SWP:P01484; PDB:1AHO; VKDGYIVDDVNCTYFCGRNAYCNEECTKLKGESGYCQWASPYGNACYCYKLPDHVRTKGP -----------1---2-----3---4---------2---------3-4------------ GRCH --1- >IMMUNOGLOBULIN FAB 5G9; SWP:P13726; PDB:1AHWA; DIKMTQSPSSMYASLGERVTITCKASQDIRKYLNWYQQKPWKSPKTLIYYATSLADGVPS ----------------------1------------------------------------- RFSGSGSGQDYSLTISSLESDDTATYYCLQHGESPYTFGGGTKLEINRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >Tissue factor [Precursor]; SWP:P13726; PDB:1AHWB; EIQLQQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKQRPEQGLEWIGLIDPENGNTIY ---------------------1-------------------------------------- DPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCARDNSYYFDYWGQGTTLTVSSAKT -----------------------------------1------------------------ TPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYT -----------------------2------------------------------------ LSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKI ------------------2--------------- >Tissue factor [Precursor]; SWP:P13726; PDB:1AHWC; TNTVAAYNLTWKSTNFKTILEWEPKPVNQVYTVQISTKSGDWKSKCFYTTDTECDLTDEI ---------------------------------------------1-------1------ VKDVKQTYLARVFSYPAGNEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVNVTVEDER ------------------------------------------------------------ TLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSSGKKTAKTNTNEFLIDVDKGENYCFSVQA ------------------------------------------------------2----- VIPSRTVNRKSTDSPVECMG -----------------2-- >ANTI-IDIOTYPIC FAB 409.5.; SWP:NA; PDB:1AIFH; EVKLQESGGGLVQPGGSMKLSCVASGFTFNNYWMSWVRQSPEKGLEWVAEIRLNSDNFAT ---------------------1-------------------------------------- HYAESVKGKFIISRDDSKSRLYLQMNSLRAEDTGIYYCVLRPLFYYAVDYWGQGTSVTVS -------------------------------------1---------------------- SAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQS ---------------------------2-------------------------------- DLYTLSSSVTVPSTWRPSETVTCNVAHPASSTKVDKKI ----------------------2--------------- >ANTI-IDIOTYPIC FAB 409.5.; SWP:NA; PDB:1AIFL; DIQLTQSPAFMAASPGEKVTITCSVSSSISSSNLHWYQQKSETSPKPWIYGTSNLASGVP ----------------------1------------------------------------- VRFSGSGSGTSYSLTISSMEAEDAATYYCQQWNSYPYTFGGGTKLEIKRADAAPTVSIFP ----------------------------1------------------------------- PSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTL --------------2--------------------------------------------- TLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC --------------2-------------------- >TATA-BINDING PROTEIN; SWP:P62001; PDB:1AISA; MVDMSKVKLRIENIVASVDLFAQLDLEKVLDLCPNSKYNPEEFPGIICHLDDPKVALLIF --------------------------------1--------------1------------ SSGKLVVTGAKSVQDIERAVAKLAQKLKSIGVKFKRAPQIDVQNMVFSGDIGREFNLDVV ------------------------------------------------------------ ALTLPNCEYEPEQFPGVIYRVKEPKSVILLFSSGKIVCSGAKSEADAWEAVRKLLRELDK ------------------------------------------------------------ Y - >ENDOGLUCANASE Z; SWP:P07103; PDB:1AIW; MGDCANANVYPNWVSKDWAGGQPTHNEAGQSIVYKGNLYTANWYTASVPGSDSSWTQVGS ---1-------------------------------------------------------- CN 1- >IMMUNOGLOBULIN 48G7 GERML; SWP:GC1_HUMAN; PDB:1AJ7L; DIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPK ----------------------1------------------------------------- RFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPRTFGGGTKVEIKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC -------------2-------------------- >LOW-DENSITY LIPOPROTEIN R; SWP:P01130; PDB:1AJJ; PCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCA -1------2----1------3-----2--------3- >P1 NUCLEASE; SWP:P24289; PDB:1AK0; WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLH ------------------------------------------------------------ FIDAEDNPPTNCNVDYERDCGSSGCSISAIANYTQRVSDSSLSSENHAEALRFLVHFIGD -----------1-------2----2----------------------------------- MTQPLHDEAYAVGGNKINVTFDGYHDNLHSDWDTYMPQKLIGGHALSDAESWAKTLVQNI ------------------------------------------------------------ ESGNYTAQAIGWIKGDNISEPITTATRWASDANALVCTVVMPHGAAALQTGDLYPTYYDS ------------------------------------1----------------------- VIDTIELQIAKGGYRLANWINEIH ------------------------ >INOSINE-5'-MONOPHOSPHATE ; SWP:P50097; PDB:1AK5; AKYYNEPCHTFNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQS ------------------------1----------------------------------- VSGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKNFKAHNELVDSQKRYLVGAGINTR ------------------------------------------------------------ DFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYL ------------------------------------------------------------ ADAGADFIKIGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGA ------------------------------------------------------------ DFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRGVDSYVPYAGKLKDNVEASLNKV ------------------------------------------------------------ KSTMCNCGALTIPQLQSKAKITLVSSVSI ----1------------------------ >BILE-SALT ACTIVATED LIPAS; SWP:P30122; PDB:1AKN; AKLGSVYTEGGFVEGVNKKLSLFGDSIDIFKGIPFAAAPKALEKPERHPGWQGTLKAKSF ------------------------------------------------------------ KKRCLQATLTQDSTYGNEDCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFL ---1---------------1---------------------------------------- SNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEA ------------------------------------------------------------ FGGDPDNITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVGLCPWAIQQDPLFWAKRI ------------------------------------------------------------ AEKVGCPVDDTSKMAGCLKITDPRALTLAYKLPLGSTEYPKLHYLSFVPVIDGDFIPDDP -----2----------2------------------------------------------- VNLYANAADVDYIAGTNDMDGHLFVGMDVPAINSNKQDVTEEDFYKLVSGLTVTKGLRGA ------------------------------------------------------------ NATYEVYTEPWAQDSSQETRKKTMVDLETDILFLIPTKIAVAQHKSHAKSANTYTYLFSQ ------------------------------------------------------------ PSRMPIYPKWMGADHADDLQYVFGKPFATPLGYRAQDRTVSKAMIAYWTNFARTGDPNTG ------------------------------------------------------------ HSTVPANWDPYTLEDDNYLEINKQMDSNSMKLHLRTNYLQFWTQTYQALPTVTSAGASLL ------------------------------------------------------------ PPEDNSQ ------- >APOKEDARCIDIN; SWP:P41249; PDB:1AKP; ASAAVSVSPATGLADGATVTVSASGFATSTSATALQCAILADGRGACNVAEFHDFSLSGG ------------------------------------1---------1------------- EGTTSVVVRRSFTGYVMPDGPEVGAVDCDTAPGGCEIVVGGNTGEYGNAAISFG ---------------------------2------2------------------- >ALPHA-LACTALBUMIN; SWP:P12065; PDB:1ALC; KQFTKCELSQNLYDIDGYGRIALPELICTMFHTSGYDTQAIVENDESTEYGLFQISNALW -----1---------------------2-------------------------------- CKSSQSPQSRNICDITCDKFLDDDITDDIMCAKKILDIKGIDYWIAHKALCTEKLEQWLC 3-----------4---3-------------4-------------------2--------1 EK -- >INTERLEUKIN-6; SWP:P05231; PDB:1ALU; LTSSERIDKQIRYILDGISALRKETCNKSNMCENLNLPKMAEKDGCFQSGFNEETCLVKI -------------------------1-----1-------------2---------2---- ITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVLIQFLQKKAKNLDAITTPDPTTNASL ------------------------------------------------------------ LTKLQAQNQWLQDMTTHLILRSFKEFLQSSLRALRQM ------------------------------------- >CD40 LIGAND; SWP:P29965; PDB:1ALY; GDQNPQIAAHVISEASSKTTSVLQWAEKGYYTMSNNLVTLENGKQLTVKRQGLYYIYAQV ------------------------------------------------------------ TFCSNREASSQAPFIASLCLKSPGRFERILLRAANTHSSAKPCGQQSIHLGGVFELQPGA --1---------------------------------------1----------------- SVFVNVTDPSQVSHGTGFTSFGLLKL -------------------------- >PEPSIN; SWP:P56272; PDB:1AM5; RVTEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNKFKPRQ --------------------------------------------1----1---------- SSTYVETGKTVDLTYGTGGMRGILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGI ------------------------------------------------------------ LGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIH ------------------------------------------------------------ WIPVTAEKYWQVALDGITVNGQTAACEGCQAIVDTGTSKIVAPVSALANIMKDIGASENQ -------------------------2--2------------------------------- GEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGDQAFCTSGLGSSGVPSNTSELWIFG ------3--------------------------------3-------------------- DVFLRNYYTIYDRTNNKVGFAPAA ------------------------ >GLANDULAR KALLIKREIN-13; SWP:P36368; PDB:1AO5A; VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCYVDQYEVWLGKNKLFQEE -------------------------1---------------1------------------ PSAQHRLVSKSFPHPGFNMSLLMLQTIPP ----------------------------- >HLA-A 0201; SWP:NA; PDB:1AO7D; KEVEQNSGPLSVPEGAIASLNCTYSDRGSQSFFWYRQYSGKSPELIMSIYSNGDKEDGRF ---------------------1-------------------------------------- TAQLNKASQYVSLLIRDSQPSDSATYLCAVTTDSWGKLQFGAGTQVVVTPDIQNP ---------------------------1--------------------------- >COAGULOGEN; SWP:P02681; PDB:1AOCA; ADTNAPICLCDEPGVLGRTQIVTTEIKDKIEKAVEAVAQESGVSGRGFSIFSHHPVFREC -------1-2-------------------------------------------------3 GKYECRTVRPEHSRCYNFPPFTHFKSECPVSTRDCEPVFGYTVAGEFRVIVQAPRAGFRQ ----4---------5------------6------2------------------------- CVWQHKCRFGSNSCGYNGRCTQQRSVVRLVTYNLEKDGFLCESFRTCCGCPCRSF 4-----7------8-----6--------------------3-----15-7-8--- >TRYPANOTHIONE REDUCTASE; SWP:P28593; PDB:1AOGA; SKIFDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKK --------------------------------------------------1----1---- LMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSYDEMFRDTEGLE ------------------------------------------------------------ FFLGWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPHMPNIPGIEHCISSNEA ------------------------------------------------------------ FYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREELTKQ ------------------------------------------------------------ LTANGIQILTKENPAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQNAGV ------------------------------------------------------------ MIKNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVFGTTPRKTDHTRV ------------------------------------------------------------ ASAVFSIPPIGTCGLIEEVASKRYEVVAVYLSSFTPLMHKVSGSKYKTFVAKIITNHSDG ------------------------------------------------------------ TVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPTSAEELCSMRTPSYYYVKGE ------------------------------------------------------------ KMEKP ----- >GP70; SWP:P03390; PDB:1AOL; QVYNITWEVTNGDRETVWAISGNHPLWTWWPVLTPDLCMLALSGPPHWGLEYQAPYSSPP -------------------------------------1---------------------- GPPCCSGSSGSSAGCSRDCDEPLTSLTPRCNTAWNRLKLDQVTHKSSEGFYVCPGSHRPR ---23---------3---2----------1----------------------4------- EAKSCGGPDSFYCASWGCETTGRVYWKPSSSWDYITVDNNLTTSQAVQVCKDNKWCNPLA ----5-------4----5-------------------------------6-----6---- IQFTNAGKQVTSWTTGHYWGLRLYVSGRDPGLTFGIRLRYQNLGPRVP ------------------------------------------------ >ASCORBATE OXIDASE; SWP:P37064; PDB:1AOZA; SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIH ------------------1----------------------------------------- WHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLI --------------------2--------------------------------------- VDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDC -----------------------------------------------------------3 SIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE ------------3-------1--------------------------------------- ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLP ------------------------------------------------------------ NSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGYV ------------------------------------------------------------ KWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQ ------------------------------------------------------------ FKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLR ------------------------------------------------------------ NTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGG ---------------------------------------------------------2-- TAKSLINNPKNP ------------ >MONOCLONAL ANTIBODY C219; SWP:Q6KB05; PDB:1AP2A; DIVMTQSPSSLTVTAGEKVTMSCKSSQSLLNSGNQKNYLTWYQQKPGQPPKLLIYWASTR ----------------------1------------------------------------- ESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDYSYPLTFGAGTKLEP ---------------------------------1------------------ >MONOCLONAL ANTIBODY C219; SWP:NA; PDB:1AP2B; EVQLQQSGAELVRPGASVKLSCTASGFNIKDDFMHWVKQRPEQGLEWIGRIDPANDNTKY ---------------------1-------------------------------------- APKFQDKATIIADTSSNTAYLQLSSLTSEDTAVYYCARREVYSYYSPLDVWGAGTTVTVP -----------------------------------1------------------------ >POKEWEED ANTIVIRAL PROTEI; SWP:Q03464; PDB:1APA; INTITFDVGNATINKYATFMKSIHNQAKDPTLKCYGIPMLPNTNLTPKYLLVTLQDSSLK ---------------------------------1-------------------------- TITLMLKRNNLYVMGYADTYNGKCRYHIFKDISNTTERNDVMTTLCPNPSSRVGKNINYD -----------------------2---------------------2-------------- SSYPALEKKVGRPRSQVQLGIQILNSGIGKIYGVDSFTEKTEAEFLLVAIQMVSEAARFK ------------------------------------------------------------ YIENQVKTNFNRAFYPNAKVLNLEESWGKISTAIHNAKNGALTSPLELKNANGSKWIVLR ------------------------------------------------------------ VDDIEPDVGLLKYVNGTCQAT -----------------1--- >ANTHOPLEURIN-B; SWP:P01531; PDB:1APF; GVPCLCDSDGPRPRGNTLSGILWFYPSGCPSGWHNCKAHGPNIGWCCKK ---1-2----------------------3------2---------13-- >EGF-LIKE MODULE OF BLOOD ; SWP:P00743; PDB:1APO; KDGDQCEGHPCLNQGHCKDGIGDYTCTCAEGFEGKNCEFSTR -----1----2-----1--------2-3--------3----- >COMPLEMENT PROTEASE C1R; SWP:P00736; PDB:1APQ; AVDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQAE ------1--------------2---1--------2-3------------3--- >ASPARTYLGLUCOSAMINIDASE; SWP:P20933; PDB:1APYA; SPLPLVVNTWPFKNATEAAWRALASGGSALDAVESGCAMCEREQCDGSVGFGGSPDELGE ---------------------------------------1----1--------------- TTLDAMIMDGTTMDVGAVGDLRRIKNAIGVARKVLEHTTHTLLVGESATTFAQSMGFINE ------------------------------------------------------------ DLSTSASQALHSDWLARNCQPNYWRNVIPDPSKYCGPYKPP ------------------2---------------2------ >N(4)-(beta-N-acetylglucos; SWP:P20933; PDB:1APYB; TIGMVVIHKTGHIAAGTSTNGIKFKIHGRVGDSPIPGAGAYADDTAGAAAATGNGDILMR ------------------------------------------------------------ FLPSYQAVEYMRRGEDPTIACQKVISRIQKHFPEFFGAVICANVTGSYGAACNKLSTFTQ --------------------1-------------------1----------2-------- FSFMVYNSEKNQPTEEKVDCI -------------------2- >FAB B7-15A2; SWP:NA; PDB:1AQKH; VQLVESGGGVVQPGRSLRLSCAASGFTFNNYAIHWVRQAPGKGLEWVAFISYDGSKNYYA --------------------1--------------------------------------- DSVKGRFTISRDNSKNTLFLQMNSLRPEDTAIYYCARVLFQQLVLYAPFDIWGQGTMVTV ----------------------------------1------------------------- SSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQ ----------------------------2------------------------------- SSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC ------------------------2-------------------- >FAB B7-15A2; SWP:NA; PDB:1AQKL; NVLTQPPSVSGAPGQRVTISCTGSNSNIGAGFTVHWYQHLPGTAPKLLIFANTNRPSGVP --------------------1--------------------------------------- DRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSARFGGGTRLTVLGQPKAAPSVTL ----------------------------1------------------------------- FPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVNAGVETTKPSKQSNNKYAASSY ----------------2------------------------------------------- LSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPAECS ---------------2------------------- >RESTRICTOCIN; SWP:P04389; PDB:1AQZA; ATWTCINQQLEDKRLLYSQAKAESNSHHAPLSDGKTGSSYPHWFTNGYDGNGKLIKGRTP ----1------------------------------------------------------- IKFGKADCDRPPKHSQNGMGKDDHYLLEFPTFPDGHDYKFDSKKPKENPGPARVIYTYPN -------2---------------------------------------------------- KVFCGIVAHQRGNQGDLRLCSH ---2---------------1-- >ACHROMOBACTER PROTEASE I; SWP:P15636; PDB:1ARB; GVSGSCNIDVVCPEGDGRRDIIRAVGAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGM -----1-----2-----------------------3---------------------3-- GTASTAASIVVYWNYQNSTCRAPNTPASGANGDGSMSQTQSGSTVKATYATSDFTLLELN -------------------2---------------------------------------- NAANPAFNLFWAGWDRRDQNYPGAIAIHHPNVAEKRISNSTSPTSFVAWGGGAGTTHLNV ------------------------------------------------------------ QWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGPSSCSATGTNRSDQYGRVFTSWTGGGAA -----------------------------------1------------------------ ASRLSDWLDPASTGAQFIDGLDS ----------------------- >ASCARIS TRYPSIN INHIBITOR; SWP:P19398; PDB:1ATA; EAEKCTKPNEQWTKCGGCEGTCAQKIVPCTRECKPPRCECIASAGFVRDAQGNCIKFEDC ----1---------2--3---4------3---2----1-5-------------5-----4 PK -- >ATROLYSIN C; SWP:P15167; PDB:1ATLA; LPQRYIELVVVADHRVFMKYNSDLNTIRTRVHEIVNFINGFYRSLNIHVSLTDLEIWSNE ------------------------------------------------------------ DQINIQSASSDTLNAFAEWRETDLLNRKSHDNAQLLTAIELDEETLGLAPLGTMCDPKLS ------------------------------------------------------1----- IGIVQDHSPINLLMGVTMAHELGHNLGMEHDGKDCLRGASLCIMRPGLTKGRSYEFSDDS ----------------------------------2------2------------------ MHYYERFLKQYKPQCILNKP --------------1----- >Deoxyribonuclease-1 [Prec; SWP:P00639; PDB:1ATND; LKIAAFNIRTFGETKMSNATLASYIVRIVRRYDIVLIQEVRDSHLVAVGKLLDYLNQDDP ------------------------------------------------------------ NTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCCGNDSFSREPAVVKFSSHS ----------------------------------------11------------------ TKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLNDVMLMGDFNADCSYVTSSQWS --------------------------------------------------2--------- SIRLRTSSTFQWLIPDSADTTATSTNCAYDRIVVAGSLLQSSVVPGSAAPFDFQAAYGLS --------------------------2--------------------------------- NEMALAISDHYPVEVTLT ------------------ >ANTITHROMBIN III; SWP:P41361; PDB:1ATTA; VEDVCTAKPRDIPVNPMCIYRATEGQGSEQKIPGATNRRVWELSKANSHFATAFYQHLAD ----1------------2------------------------------------------ SKNNNDNIFLSPLSISTAFAMTKLGACNNTLTQLMEVFKFDTISEKTSDQIHFFFAKLNC --------------------------2--------------------------------1 RLYRKANKSSELVSANRLFGDKSITFNETYQDISEVVYGAKLQPLDFKGNAEQSRLTINQ ------------------------------------------------------------ WISNKTEGRITDVIPPQAINEFTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCS ----------------------------------------------------------3- VLMMYQESKFRYRRVAESTQVLELPFKGDDITMVLILPKLEKTLAKVEQELTPDMLQEWL ------------------------------------------------------------ DELTETLLVVHMPRFRIEDSFSVKEQLQDMGLEDLFSPEKSRLPGIVAEGRSDLYVSDAF ------------------------------------------------------------ HKAFLEVNEEGSEAAASTVISIAGRSLRVTFKANRPFLVLIREVALNTIIFMGRVANPCV ----------------------------------------------------------3- D - >ATX IA; SWP:P01533; PDB:1ATX; GAACLCKSDGPNTRGNSMSGTIWVFGCPSGWNNCEGRAIIGYCCKQ ---1-2--------------------3------2--------13-- >INTERFERON-BETA; SWP:P01574; PDB:1AU1A; MSYNLLGFLQRSSNFQCQKLLWQLNGRLEYCLKDRMNFDIPEEIKQLQQFQKEDAALTIY ------------------------------1----------------------------- EMLQNIFAIFRQDSSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSL ------------------------------------------------------------ HLKRYYGRILHYLKAKEYSHCAWTIVRVEILRNFYFINRLTGYLRN --------------------1------------------------- >ARYLSULFATASE A; SWP:P15289; PDB:1AUK; RPPNIVLIFADDLGYGDLGCYGHPSSTTPNLDQLAAGGLRFTDFYVPVSLTPSRAALLTG ------------------------------------------------------------ RLPVRMGMYPGVLVPSSRGGLPLEEVTVAEVLAARGYLTGMAGKWHLGVGPEGAFLPPHQ ------------------------------------------------------------ GFHRFLGIPYSHDQGPCQNLTCFPPATPCDGGCDQGLVPIPLLANLSVEAQPPWLPGLEA ----------------1----2------2---1--------------------------- RYMAFAHDLMADAQRQDRPFFLYYASHHTHYPQFSGQSFAERSGRGPFGDSLMELDAAVG ------------------------------------------------------------ TLMTAIGDLGLLEETLVIFTADNGPETMRMSRGGCSGLLRCGKGTTYEGGVREPALAFWP ----------------------------------------3------------------- GHIAPGVTHELASSLDLLPTLAALAGAPLPNVTLDGFDLSPLLLGTGKSPRQSLFFYPSY ------------------------------------------------------------ PDEVRGVFAVRTGKYKAHFFTQGSAHSDTTADPACHASSSLTAHEPPLLYDLSKDPGENY ----------------------------------3------------------------- NLLGATPEVLQALKQLQLLKAQLDAAVTFGPSQVARGEDPALQICCHPGCTPRPACCHCP --------------------------------------------45---6-----64-5- >PR-5D; SWP:P25871; PDB:1AUN; SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRG ---------1-----------------------------------------2-------- WCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGK -2----3-----3----------------------------------------------- CHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAY 4----5-------6---------6---7--------78----8------------5---- SYPQDDPTSTFTCTSWTTDYKVMFCPYG ------------4-----------1--- >Vitamin K-dependent prote; SWP:P04070; PDB:1AUTC; LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMDESKKLLVRLGEYDLR --------------------------1---------------1----------------- RWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERAE ----------------------------------------------------------- >Vitamin K-dependent prote; SWP:P04070; PDB:1AUTL; QCLVLPLEHPCASLCCGHGTCIGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYC -1--------2---32----1-------3-4--------4--------5------6---5 LEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWK --------6-7------------7------------- >Alpha-amylase/subtilisin ; SWP:P07596; PDB:1AVAC; ADPPPVHDTDGHELRADANYYVLSANRAHGGGLTMAPGHGRHCPLFVSQDPNGQHDGFPV ------------------------------------------1----------------- RITPYGVAPSDKIIRLSTDVRISFRAYTTCLQSTEWHIDSELAAGRRHVITGPVKDPSPS -----------------------------1------------------------------ GRENAFRIEKYSGAEVHEYKLMSCGDWCQDLGVFRDLKGGAWFLGATEPYHVVVFKKAPP -----------------------2---2-------------------------------- A - >ARCELIN-1; SWP:P19329; PDB:1AVBA; SNDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTID ------------------------------------------------------------ NLASFSTNFTFRINAKNIENSAYGLAFALVPVGSRPKLKGRYLGLFNTTNYDRDAHTVAV ------------------------------------------------------------ VFDTVSNRIEIDVNSIRPIATESCNFGHNNGEKAEVRITYDSPKNDLRVSLLYPSSEEKC -----------------------1-----------------------------------1 HVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFSSNFI ---------------------------------------------- >Triabin [Precursor]; SWP:Q27049; PDB:1AVGI; AEGDDCSIEKAMGDFKPEEFFNGTWYLAHGPGVTSPAVCQKFTTSGSKGFTQIVEIGYNK -----1--------------------------------2--------------------- FESNVKFQCNQVDNKNGEQYSFKCKSSDNTEFEADFTFISVSYDNFALVCRSITFTSQPK --------3--------------3-------------------------1---------- EDRYLVFERTKSDTDPDAKEIC ---------------------2 >Trypsin inhibitor A [Prec; SWP:P01070; PDB:1AVWB; DFVLDNEGNPLENGGTYYILSDITAFGGIRAAPTGNERCPLTVVQSRNELDKGIGTIISS --------------------------------------1--------------------- PYRIRFIAEGHPLSLKFDSFAVIMLCVGIPTEWSVVEDLPEGPAVKIGENKDAMDGWFRL -------------------------1---------------------------------- ERVSEFNNYKLVFCPQDKCGDIGISIDHDDGTRRLVVSKNKPLVVQFQKLD -------------2----2-------------------------------- >OBESITY PROTEIN; SWP:P41159; PDB:1AX8; IQKVQDDTKTLIKTIVTRINDILDFIPGLHPILTLSKMDQTLAVYQQILTSMPSRNVIQI ------------------------------------------------------------ SNDLENLRDLLHVLAFSKSCHLPEASGLETLDSLGGVLEASGYSTEVVALSRLQGSLQDM -------------------1---------------------------------------- LWQLDLSPGC ---------1 >ATRACOTOXIN-HVI; SWP:P56207; PDB:1AXH; SPTCIPSGQPCPYNENCCSQSCTFKENENGNTVKRCD ---1------2-----31---2-------------3- >GROWTH HORMONE; SWP:P01241; PDB:1AXIA; TIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPSLCFSESIPTPSNR ------------------------------------------------1----------- EETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEERIQTL ------------------------------------------------------------ MGRLTGQIFKQTYSKFDTALLKNYGLLYCFRRDMTYVATYLRIVQCRSVEGSCGF ----------------------------1----------------2------2-- >Growth hormone receptor [; SWP:P10912; PDB:1AXIB; EPKFTKCRSPERETFSCHWTDEGPIQLFYTRRNEWKECPDYVSAGENSCYFNSSFTSIAI ------1---------1--------------------2----------2----------- PYCIKLTSNGGTVDEKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADI --3-------------3------------------------------------------- QKGWMVLEYELQYKEVNETKWKMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEF ------------------------------------------------------------ SEVLYVTLPQM ----------- >TYPE 4 PILIN; SWP:P02974; PDB:1AY2; FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPEN ------------------------------------------------------------ NTSAGVASPPSDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWF ------------------------------------------------------------ CGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFDAK 1-----------------------------1------- >ANTIFUNGAL PROTEIN 1; SWP:P30231; PDB:1AYJ; KLCERPSGTWSGVCGNNNACKNQCINLEKARHGSCNYVFPAHKCICYFPC --1----------2-----3---4----------2--------3-4---1 >ALPHA-2-MACROGLOBULIN; SWP:Q7SIH1; PDB:1AYOA; EFPFALEVQTLPQTCDGPKAHTSFQISLSVSYIGSRPASNMAIVDVKMVSGFIPLKPTVK --------------1--------------------------------------------- MLERSNVSRTEVSNNHVLIYLDKVTNETLTLTFTVLQDIPVRDLKPAIVKVYDYYETDEF ------------------------------------------------------------ AVAEYSAPCS --------1- >CELLOBIOHYDROLASE I; SWP:P62694; PDB:1AZ6; TQSHAGQCGGIGYSGPTVCASGTTCQVLNPYYSQCL -------1----------2-----1---------2- >C-REACTIVE PROTEIN; SWP:P02741; PDB:1B09A; QTDMSRKAFVFPKESDTSYVSLKAPLTKPLKAFTVCLHFYTELSSTRGYSIFSYATKRQD -----------------------------------1------------------------ NEILIFWSKDIGYSFTVGGSEILFEVPEVTVAPVHICTSWESASGIVEFWVDGKPRVRKS ------------------------------------1----------------------- LKKGYTVGAEASIILGQEQDSFGGNFEGSQSLVGDIGNVNMWDFVLSPDEINTIYLGGPF ------------------------------------------------------------ SPNVLNWRALKYEVQGEVFTKPQLWP -------------------------- >BENCE-JONES KAPPA I PROTE; SWP:P01594; PDB:1B0WA; DIQMTQSPSSLSASVGDRVTITCQASQDISDYLIWYQQKLGKAPNLLIYDASTLETGVPS ----------------------1------------------------------------- RFSGSGSGTEYTFTISSLQPEDIATYYCQQYDDLPYTFGQGTKVEIKR ---------------------------1-------------------- >PRION PROTEIN; SWP:P04273; PDB:1B10A; LGGYMLGSAMSRPMMHFGNDWEDRYYRENMNRYPNQVYYRPVDQYNNQNNFVHDCVNITI ------------------------------------------------------1----- KQHTVTTTTKGENFTETDIKIMERVVEQMCTTQYQKESQAYYDG -----------------------------1-------------- >SIGNAL PEPTIDASE I; SWP:P00803; PDB:1B12A; RSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYP ------------------------------------------------------------ EDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTF ---------------------------------1-----1-------------------- SRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQ ------------------------------------------------------------ QLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFDGLRLSRIGGIH ----------------------------------------------------------- >ALPHA-AMYLASE/TRYPSIN INH; SWP:P01087; PDB:1B1UA; GTSCIPGMAIPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRI ---1-------------2--------3--------------24---------1-5----- LMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHGGPFCLSLLG ----------------------3-----------------4----------5----- >LACTOFERRIN; SWP:O77811; PDB:1B1XA; APRKSVRWCTISPAEAAKCAKFQRNMKKVRGPSVSCIRKTSSFECIQAIAANKADAVTLD --------1---------2----------------2--------1--------------- GGLVYEAGLHPYKLRPVAAEVYQTRGKPQTRYYAVAVVKKGSGFQLNQLQGVKSCHTGLG ------------------------------------------------------3----- RSAGWNIPIGTLRPYLNWTGPPEPLQKAVANFFSASCVPCADGKQYPNLCRLCAGTEADK ------------------------------------4--5---------6--4------- CACSSQEPYFGYSGAFKCLENGAGDVAFVKDSTVFENLPDEAERDKYELLCPDNTRKPVD 6-5--------------3--------------------------------7--------- AFKECHLARVPSHAVVARSVDGREDLIWKLLHRAQEEFGRNKSSAFQLFGSTPGEQDLLF ----7------------------------------------------------------- KDSALGFVRIPSQIDSGLYLGANYLTATQNLRETAAEVAARRERVVWCAVGPEEERKCKQ -----------------------------------------------8---------9-- WSDVSNRKVACASASTTEECIALVLKGEADALNLDGGFIYVAGKCGLVPVLAENQKSQNS ----------9--------8------------------------a--------------- NAPDCVHRPPEGYLAVAVVRKSDADLTWNSLSGKKSCHTGVGRTAAWNIPMGLLFNQTGS ----b-------------------------------c----------------------- CKFDKFFSQSCAPGADPQSSLCALCVGNNENENKCMPNSEERYYGYTGAFRCLAEKAGDV d---------e----------f--e---------f----------------c-------- AFVKDVTVLQNTDGKNSEPWAKDLKQEDFELLCLDGTRKPVAEAESCHLARAPNHAVVSQ --------------------------------g-------------g------------- SDRAQHLKKVLFLQQDQFGGNGPDCPGKFCLFKSETKNLLFNDNTECLAELQGKTTYEQY ------------------------h----h----------------b------------- LGSEYVTSITNLRRCSSSPLLEACAFLRA --------------d--------a----- >LECTIN; SWP:Q9ZP49; PDB:1B2PA; NNIIFSKQPDDNHPQILHATESLEILFGTHVYRFIMQTDCNLVLYDNNNPIWATNTGGLG ---------------------------------------1-------------------- NGCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYGDALWATQTVR --1-------------------------------------------------------- >ANTIBODY (LIGHT CHAIN); SWP:NA; PDB:1B2WH; VQLVQSGGGVVQPGRSLKLSCLASGYIFTSSWINWVKQRPGRGLEWIGRIDPSDGEVHYN --------------------1--------------------------------------- QDFKDRFTISRDKSKNTLYLQMNSLRPEDTAVYYCARGFLPWFADWGQGTLVTVSSASTK ----------------------------------1------------------------- GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS ----------------------2------------------------------------- LSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC ------------------2-------------------- >ALPHA-AMYLASE; SWP:P04746; PDB:1B2YA; YSPNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWER --------------------------1--------------------------------- YQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGNAVSAGTSSTCGSYFNP --------2---------------1----------------------------2------ GSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLTGLLDLALEKDYVRSKIAE -------------------3------------------3--------------------- YMNHLIDIGVAGFRLDASKHMWPGDIKAILDKLHNLNSNWFPAGSKPFIYQEVIDLGGEP ------------------------------------------------------------ IKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWGFVPSDRALVFVDNHDN ------------------------------------------------------------ QRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWPRQFQNGNDVNDWVGPP ------------------------------------------------------------ NNNGVIKEVTINPDTTCGNDWVCEHRWRQIRNMVIFRNVVDGQPFTNWYDNGSNQVAFGR ----------------4-----4------------------------------------- GNRGFIVFNNDDWSFSLTLQTGLPAGTYCDVISGDKINGNCTGIKIYVSDDGKAHFSISN ----------------------------5-----------5------------------- SAEDPFIAIHAESKL --------------- >XYLANASE; SWP:P56588; PDB:1B30A; ASVSIDAKFKAHGKKYLGTIGDQYTLTKNTKNPAIIKADFGQLTPENSMKWDATEPNRGQ ------------------------------------------------------------ FTFSGSDYLVNFAQSNGKLIRGHTLVWHSQLPGWVSSITDKNTLISVLKNHITTVMTRYK ------------------------------------------------------------ GKIYAWDVLNEIFNEDGSLRNSVFYNVIGEDYVRIAFETARSVDPNAKLYINDYNLDSAG ------------------------------------------------------------ YSKVNGMVSHVKKWLAAGIPIDGIGSQTHLGAGAGSAVAGALNALASAGTKEIAITELDI ------------------------------------------------------------ AGASSTDYVNVVNACLNQAKCVGITVWGVADPDSWRSSSSPLLFDGNYNPKAAYNAIANA --------------1-----1--------------------------------------- L - >NEUROTOXIN CSE-I; SWP:P01491; PDB:1B3CA; KDGYLVEKTGCKKTCYKLGENDFCNRECKWKHIGGSYGYCYGFGCYCEGLPDSTQTWPLP ----------1---2--------3---4-----------2----3-4------------- NKTC ---1 >MHC CLASS I HOMOLOG MIC-A; SWP:Q29983; PDB:1B3JA; EPHSLRYNLTVLSWDGSVQSGFLTEVHLDGQPFLRCDRQKCRAKPQGQWAEDVLGNKTWD -----------------------------------1----1------------------- RETRDLTGNGKDLRMTLAHIKDQKEGLHSLQEIRVCEIHEDNSTRSSQHFYYDGELFLSQ -----------------------------------2------------------------ NLETKEWTMPQSSRAQTLAMNVRNFLKEDAMADCLQELRRYLKSGVVLRRTVPPMVNVTR ---------------------------------2-------------------------- SEASEGNITVTCRASGFYPWNITLSWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRIC -----------3------------------------------------------------ QGEEQRFTCYMEHSGNHSTHPVPS --------3--------------- >ACETYLCHOLINESTERASE; SWP:P22303; PDB:1B41A; DAELLVTVRGGRLRGIRLKTPGGPVSAFLGIPFAEPPMGPRRFLPPEPKQPWSGVVDATT ------------------------------------------------------------ FQSVCYQYVDTLYPGFEGTEMWNPNRELSEDCLYLNVWTPYPRPTSPTPVLVWIYGGGFY ----1--------------------------1---------------------------- SGASSLDVYDGRFLVQAERTVLVSMNYRVGAFGFLALPGSREAPGNVGLLDQRLALQWVQ ------------------------------------------------------------ ENVAAFGGDPTSVTLFGESAGAASVGMHLLSPPSRGLFHRAVLQSGAPNGPWATVGMGEA ------------------------------------------------------------ RRRATQLAHLVGCPNDTELVACLRTRPAQVLVNHEWHVLPQESVFRFSFVPVVDGDFLSD ------------2--------2-------------------------------------- TPEALINAGDFHGLQVLVGVVKDEGSYFLVYGAPGFSKDNESLISRAEFLAGVRVGVPQV ------------------------------------------------------------ SDLAAEAVVLHYTDWLHPEDPARLREALSDVVGDHNVVCPVAQLAGRLAAQGARVYAYVF --------------------------------------3--------------------- EHRASTLSWPLWMGVPHGYEIEFIFGIPLDPSRNYTAEEKIFAQRLMRYWANFARTGDPN ------------------------------------------------------------ EPPKAPQWPPYTAGAQQYVSLDLRPLEVRRGLRAQACAFWNRFLPKLLSAT ------------------------------------3-------------- >ACETYLCHOLINESTERASE; SWP:P01403; PDB:1B41B; TMCYSHTTTSRAILTNCGENSCYRKSRRHPPKMVLGRGCGCPPGDDNLEVKCCTSPDKCN --1-------------2----1----------------2-3----------34-----4- Y - >ARGININE REPRESSOR; SWP:O31408; PDB:1B4BA; ALVDVFIKLDGTGNLLVLRTLPGNAHAIGVLLDNLDWDEIVGTICGDDTCLIICRTPKDA --------------------------------------------1----1---------- KKVSNQLLSML ----------- >ANTIBODY; SWP:NA; PDB:1B4JH; VQLQQPGADLVMPGAPVKLSCLASGYIFTSSWINWVKQRPGRGLEWIGRIDPSDGEVHYN --------------------1--------------------------------------- QDFKDKATLTVDKSSSTAYIQLNSLTSEDSAVYYCARGFLPWFADWGQGTLVTVSAASTK ----------------------------------1------------------------- GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS ----------------------2------------------------------------- LSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC ------------------2-------------------- >ANTIBODY; SWP:NA; PDB:1B4JL; NIVMTQSPKSMYVSIGERVTLSCKASENVDTYVSWYQQKPEQSPKLLIYGASNRYTGVPD ----------------------1------------------------------------- RFTGSGSATDFTLTISSVQAEDLADYHCGQSYNYPFTFGSGTKLEIKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC -------------2-------------------- >FATTY ACID BINDING PROTEI; SWP:Q01469; PDB:1B56; TVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTLKT ------------------------------------------------------------ TQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVECVM ---------------------------------------------------------1-- NNVTCTRIYEKVE ----1-------- >INTERFERON TAU; SWP:P56828; PDB:1B5L; CYLSRKLMLDARENLKLLDRMNRLSPHSCLQDRKDFGLPQEMVEGDQLQKDQAFPVLYEM 1----------------------------------------------------------- LQQSFNLFYTEHSSAAWDTTLLEQLCTGLQQQLDHLDTCRGMDPIVTVKKYFQGIYDYLQ --------------------------------------1--------------------- EKGYSDCAWEIVRVEMMRALTVSTTLQKRLTK -------------------------------- >POLYAMINE OXIDASE; SWP:Q546R6; PDB:1B5QA; PRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVELGANWVEGV ------------------------------------------------------------ NGGKMNPIWPIVNSTLKLRNFRSDFDYLAQNVYKEDGGVYDEDYVQKRIELADSVEEMGE ------------------------------------------------------------ KLSATLHASGRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTV ------------------------------------------------------------ PLATFSDFGDDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP ------------------------------------------------------------ GGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLK ------------------------------------------------------------ FPRKFWPEGKGREFFLYASSRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQ ------------------------------------------------------------ TKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGR ------------------------------------------------------------ VYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKKMC --------------------------------1-----1 >IMMUNOGLOBULIN; SWP:Q6GMX8; PDB:1B6DA; DIQMTQSPSSLSASVGDRVTITCQASQDISSYLNWYQQKPGKAPKLLIHAASSLETGVPS ----------------------1------------------------------------- RFSGSGSGTDFSFTISSLQPEDLATYYCQQYDSLPLTFGGGTKVEIKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNRG -------------2------------------ >CD94; SWP:Q13241; PDB:1B6E; CSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIG 1-2--------1-2----------------3----------------------------- LSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQL ---------------------------------4-------------4-------3---- I - >RIBONUCLEASE; SWP:P00656; PDB:1B6VA; KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVKAVCSQ -------------------------1-------------2-----------------3-- KKVTCKNGQTNCYQSKSTMRITDCRETGSSKYPNCAYKTTQANKHIIVACGGKPYVPVHF ----4------4-----------1----------2--------------3---------- DASV ---- >Glyceraldehyde-3-phosphat; SWP:P39460; PDB:1B7GO; MVNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKF ------------------------------------------------------------ EESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFS ------------------------------------------------------------ ALCNYNEALGKKYIRVVSCNTTALLRTICTVNKVSKVEKVRATIVRRAADQKEVKKGPIN --1-------------------------1------------------------------- SLVPDPATVPSHHAKDVNSVIRNLDIATMAVIAPTTLMHMHFINITLKDKVEKKDILSVL ------------------------------------------------------------ ENTPRIVLISSKYDAEATAELVEVARDLKRDRNDIPEVMIFSDSIYVKDDEVMLMYAVHQ ------------------------------------------------------------ ESIVVPENIDAIRASMKLMSAEDSMRITNESLGILKGYLI ---------------------------------------- >RECOMBINANT LIGNIN PEROXI; SWP:P06181; PDB:1B80A; RATCSNGKTVGDASCCAWFDVLDDIQQNLFHGGQCGAEAHESIRLVFHDSIAISPAMEAQ ---1----------21------------------3------------------------- GKFGGGGADGSIMIFDDIETAFHPNIGLDEIVKLQKPFVQKHGVTPGDFIAFAGAVALSN ------------------------------------------------------------ CPGAPQMNFFTGRAPATQPAPDGLVPEPFHTVDQIINRVNDAGEFDELELVMLSAHSVAA 3----------------------------------------------------------- VNDVDPTVQGLPFDSTPGIFDSQFFVETQLRGTAFPGSGGNQGEVESPLPGEIRIQSDHT ------------------------------------------------------------ IARDSRTACEWQSFVNNQSKLVDDFQFIFLALTQLGQDPNAMTDCSDVIPQSKPIPGNLP --------4-----------------------------------2--------------- FSFFPAGKTIKDVEQACAETPFPTLTTLPGPETSVQRIPPPPGA ----------------4--------------------------- >T CELL RECEPTOR V-ALPHA D; SWP:Q5R1B3; PDB:1B88A; MQQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSNKKEDG ----------------------1------------------------------------- RFTIFFNKREKKLSLHIADSQPGDSATYFCAASASFGDNSKLIWGLGTSLVVNP -----------------------------1------------------------ >NEUROTROPHIN-3; SWP:P20783; PDB:1B8KA; YSVCDSESLWVTDKSSAIDIRGHQVTVLGEIVKQYFYETRCKEGCRGIDDKHWNSQCKTS ---1------------------------------------2---3-----------1--- QTYVRALTSENNKLVGWRWIRIDTSCVCAL -------------------------2-3-- >Neurotrophin-5 [Precursor; SWP:P34130; PDB:1B8MB; GELAVCDAVSGWVTDRRTAVDLRGREVEVLGEVPAAGGSPLRQYFFETRCKAAGGPGAGG -----1-------------------------------------------2---------- GGCRGVDRRHWVSECKAKQSYVRALTADAQGRVGWRWIRIDTACVCTLLSRTGRA --3-----------1----------------------------2-3--------- >DEFENSIN-LIKE PEPTIDE 1; SWP:P82172; PDB:1B8WA; FVQHRPRDCESINGVCRHKDTVNCREIFLADCYNDGQKCCRK --------1------2-------3-------2------13-- >ALPHA-LACTALBUMIN; SWP:P00709; PDB:1B9OA; KQFTKCELSQLLKDIDGYGGIALPELICTMFHTSGYDTQAIVENDESTEYGLFQISNKLW -----1---------------------2-------------------------------- CKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDIKGIDYWLAHKALCTEKLEQWLC 3-----------4---3-------------4-------------------2--------1 EKL --- >NEURAMINIDASE; SWP:P03474; PDB:1B9VA; EPEWTYPRLSCQGSTFQKALLISPHRFGEIKGNSAPLIIREPFVACGPKECRHFALTHYA ----------1----------------------------------2----2--------- AQPGGYYNGTRKDRNKLRHLVSVKLGKIPTVENSIFHMAAWSGSACHDGREWTYIGVDGP ---------------------------------------------3-------------- DNDALVKIKYGEAYTDTYHSYAHNILRTQESACNCIGGDCYLMITDGSASGISKCRFLKI --------------------------------3-4----4-------------------- REGRIIKEILPTGRVEHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRL --------------------5-6---------6-5------------------------- MCTKTYLDTPRPDDGSIAGPCESNGDKWLGGIKGGFVHQRMASKIGRWYSRTMSKTNRMG -7------------------7--------------------------------------- MELYVRYDGDPWTDSDALTLSGVMVSIEEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKD -------------------------------------------1---8------------ TWHSAATAIYCLMGSGQLLWDTVTGVDMAL ----------8------------------- >MEROZOITE SURFACE PROTEIN; SWP:Q25659; PDB:1B9WA; MSSEHRCIDTNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEA ------1----------1-----------2----------2-------3------4---- ECKMNDKNEIVCKCTKEGSEPLFEGVFCSHH -3---------4-5-------------5--- >IGG1-KAPPA AN02 FAB (HEAV; SWP:NA; PDB:1BAFH; DVQLQESGPGLVKPSQSQSLTCTVTGYSITSDYAWNWIRQFPGNKLEWMGYMSYSGSTRY ---------------------1-------------------------------------- NPSLRSRISITRDTSKNQFFLQLKSVTTEDTATYFCARGWPLAYWGQGTQVSVSEAKTTP -----------------------------------1------------------------ PSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLS ---------------------2-------------------------------------- SSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRDC ----------------2-------------------- >POLLEN ALLERGEN 5; SWP:P10414; PDB:1BBG; DDGLCYEGTNCGKVGKYCCSPIGKYCVCYDSKAICNKNCT ----1-----2------34------2-3------1---4- >IGG4-KAPPA B72.3 FAB (HEA; SWP:GC4_HUMAN; PDB:1BBJH; VQLQQSDAELVKPGASVKISCKASGYTFTDHAIHWAKQKPEQGLEWIGYISPGNDDIKYN --------------------1--------------------------------------- EKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFCKRSYYGHWGQGTTLTVSSASTKGPS ----------------------------------1------------------------- VFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSS -------------------2---------------------------------------- VVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV ---------------2--------------- >IGG4-KAPPA B72.3 FAB (HEA; SWP:GC4_HUMAN; PDB:1BBJL; DIQMTQSPASLSVSVGETVTITCRASENIYSNLAWYQQKQGKSPQLLVYAATNLADGVPS ----------------------1------------------------------------- RFSGSGSGTQYSLKINSLQSEDFGSYYCQHFWGTPYTFGGGTRLEIKRADAAPTVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNR -------------2----------------- >BILIN BINDING PROTEIN; SWP:P09464; PDB:1BBPA; NVYHDGACPEVKPVDNFDWSNYHGKWWEVAKYPNSVEKYGKCGWAEYTPEGKSVKVSNYH -------1---------------------------------2------------------ VIHGKEYFIEGTAYPVGDSKIGKIYHKLTYGGVTKENVFNVLSTDNKNYIIGYYCKYDED ------------------------------------------------------1----- KKGHQDFVWVLSRSKVLTGEAKTAVENYLIGSPVVDSQKLVYSDFSEAACKVN -------------------------------------------------2--- >Ubiquinol-cytochrome c re; SWP:P13272; PDB:1BCCE; SHTDIKVPNFSDYRRPPDDYSTKSSRESDPSRKGFSYLVTAVTTLGVAYAAKNVVTQFVS ------------------------------------------------------------ SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP ------------------------------------------------------------ QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL -----------------------1---------------1-------------------- EVPSYEFTSDDMVIVG ---------------- >TOXIN BJXTR-IT; SWP:P56637; PDB:1BCG; KKNGYPLDRNGKTTCSGVNAIAPHYCNSECTKVYYAESGYCCWGACYCFGLEDDKPIGPM --------------1----------2---3----------14---2-3------------ KDITKKYCDVQI -------4---- >PERTUSSIS TOXIN; SWP:P04977; PDB:1BCPA; DPPATVYRYDSRPPEDVFQNGFTAWGNNDNVLEHLTGRSCQVGSSNSAFVSTSSSRRYTE ---------------------------------------1-------------------- VYLEHRMQEAVEAERAGRGTGHFIGYIYEVRADNNFYGAASSYFEYVDTYGDNAGRILAG ------------------------------------------------------------ ALATYQSEYLAHRRIPPENIRRVTRVYHNGITGETTTTEYSNARYVSQQTRANPNPYTSR ------------------------------------------------------------ RSVASIVGTLVRMAPVVGACMARQAESSEEAMVLVYYESIAYSF -------------------1------------------------ >Pertussis toxin subunit 2; SWP:P04978; PDB:1BCPB; PGIVIPPQEQITQHGSPYGRCANKTRALTVAELRGSGDLQEYLRHVTRGWSIFALYDGTY --------------------1--------------------------------------- LGGEYGGVIKDGTPGGAFDLKTTFCIMTTRNTGQPATDHYYSNVTATRLLSSTNSRLCAV ------------------------1--------------------------------2-- FVRSGQPVIGACTSPYDGKYWSMYSRLRKMLYLIYVAGISVRVHVSKEEQYYDYEDATFE -----------2------------------------------------------------ TYALTGISICNPGSSLC ---------3------3 >Pertussis toxin subunit 3; SWP:P04979; PDB:1BCPC; GIVIPPKALFTQQGGAYGRCPNGTRALTVAELRGNAELQTYLRQITPGWSIYGLYDGTYL -------------------1---------------------------------------- GQAYGGIIKDAPPGAGFIYRETFCITTIYKTGQPAADHYYSKVTATRLLASTNSRLCAVF -----------------------1--------------------------------2--- VRDGQSVIGACASPYEGRYRDMYDALRRLLYMIYMSGLAVRVHVSKEEQYYDYEDATFQT ----------2------------------------------------------------- YALTGISLCNPAASIC --------3------3 >PERTUSSIS TOXIN; SWP:P04980; PDB:1BCPD; DVPYVLVKTNMVVTSVAMKPYEVTPTRMLVCGIAAKLGAAASSPDAHVPFCFGKDLKRPG ------------------------------1-------------------1--------- SSPMEVMLRAVFMQQRPLRMFLGPKQLTFEGKPALELIRMVECSGKQDCP ------------------------------------------2-----2- >Pertussis toxin subunit 5; SWP:P04981; PDB:1BCPF; LPTHLYKNFTVQELALKLKGKNQEFCLTAFMSGRSLVRACLSDAGHEHDTWFDTMLGFAI -------------------------1-------------1-------------------- SAYALKSRIALTVEDSPYPGTPGDLLELQICPLNGYCE ------------------------------2-----2- >HEXOKINASE; SWP:Q26609; PDB:1BDG; FSDQQLFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTP ------------------------------------------------------------ NGTETGNFLALDLGGTNYRVLSVTLEGGKSPRIQERTYCIPAEKMSGSGTELFKYIAETL ------------------------------------------------------------ ADFLENNGMKDKKFDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTELD ------------------------------------------------------------ KRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMDGVKEPE ---------------------1------1------------------------------- VVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLV ------------------------------------------------------------ EQKILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIV ------------------------------------------------------------ RYACEMVVKRAAYLAGAGIACILRRINRSEVTVGVDGSLYKFHPKFCERMTDMVDKLKPK ------------------------------------------------------------ NTRFCLRLSEDGSGKGAAAIAASC ------------------------ >BDS-I; SWP:P11494; PDB:1BDS; AAPCFCSGKPGRGDLWILRGTCPGGYGYTSNCYKWPNICCYPH ---1-2---------------3---------2------13--- >BIFUNCTIONAL AMYLASE/SERI; SWP:P01088; PDB:1BEA; SCVPGWAIPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILM -1-------------2--------3--------------24---------1-5------- DGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPWILG ---------------------3-----------------4----------5----- >BETA-LACTOGLOBULIN; SWP:P02755; PDB:1BEBA; QTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENG ------------------------------------------------------------ ECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLVCQCLVR -1---------------------------------------2------------2----- TPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQC -----------------------------------1 >DSBA OXIDOREDUCTASE; SWP:P32557; PDB:1BED; AQFKEGEHYQVLKTPASSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSF -----------------------------1--1--------------------------- MGGNMGQAMSKAYATMIALEVEDKMVPVMFNRIHTLRKPPKDEQELRQIFLDEGIDAAKF ------------------------------------------------------------ DAAYNGFAVDSMVRRFDKQFQDSGLTGVPAVVVNNRYLVQGQSVKSLDEYFDLVNYLLTL ------------------------------------------------------------ K - >POTASSIUM CHANNEL TOXIN S; SWP:P29187; PDB:1BEI; RSCIDTIPKSRCTAFQCKHSMYRLSFCRKTCGTC --1--------2----3---------2---3--1 >BETA-NERVE GROWTH FACTOR; SWP:P01139; PDB:1BET; GEFSVCDSVSVWVGDKTTATDIKGKEVTVLAEVNINNSVFRQYFFETKCRASNPVESGCR -----1------------------------------------------2---------3- GIDSKHWNSYCTTTHTFVKALTTDEKQAAWRFIRIDTACVCVLSRKA ----------1---------------------------2-3------ >CAMPATH-1H ANTIBODY; SWP:NA; PDB:1BEYH; QVQLQESGPGLVRPSQTLSLTCTVSGFTFTDFYMNWVRQPPGRGLEWIGFIRDKAKGYTT ---------------------1-------------------------------------- EYNPSVKGRVTMLVDTSKNQFSLRLSSVTAADTAVYYCAREGHTAAPFDYWGQGSLVTVS -------------------------------------1---------------------- SASTKGPSVFPLAPAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSV ------------------2----------------------------------------- VTVPSSSLGTQTYICNVNHKPSNTKVDKKV --------------2--------------- >CALCICLUDINE; SWP:P81658; PDB:1BF0; WQPPWYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCLGK ------1--------2---------------3-------2------------3---1--- >ISOAMYLASE; SWP:P10342; PDB:1BF2; AINSMSLGASYDAQQANITFRVYSSQATRIVLYLYSAGYGVQESATYTLSPAGSGVWAVT ------------------------------------------------------------ VPVSSIKAAGITGAVYYGYRAWGPNWPYASNWGKGSQAGFVSDVDANGDRFNPNKLLLDP ------------------------------------------------------------ YAQEVSQDPLNPSNQNGNVFASGASYRTTDSGIYAPKGVVLVPSTQSTGTKPTRAQKDDV ------------------------------------------------------------ IYEVHVRGFTEQDTSIPAQYRGTYYGAGLKASYLASLGVTAVEFLPVQETQNDANDVVPN ------------------------------------------------------------ SDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVYMDVVYNHTAE ------------------------------------------------------------ GGTWTSSDPTTATIYSWRGLDNATYYELTSGNQYFYDNTGIGANFNTYNTVAQNLIVDSL ------------------------------------------------------------ AYWANTMGVDGFRFDLASVLGNSCLNGAYTASAPNCPNGGYNFDAADSNVAINRILREFT -----------------------1-----------1------------------------ VRPAAGGSGLDLFAEPWAIGGNSYQLGGFPQGWSEWNGLFRDSLRQAQNELGSMTIYVTQ ------------------------------------------------------------ DANDFSGSSNLFQSSGRSPWNSINFIDVHDGMTLKDVYSCNGANNSQAWPYGPSDGGTST ---------------------------------------2-------------------- NYSWDQGMSAGTGAAVDQRRAARTGMAFEMLSAGTPLMQGGDEYLRTLQCNNNAYNLDSS -------------------------------------------------2---------- ANWLTYSWTTDQSNFYTFAQRLIAFRKAHPALRPSSWYSGSQLTWYQPSGAVADSNYWNN ------------------------------------------------------------ TSNYAIAYAINGPSLGDSNSIYVAYNGWSSSVTFTLPAPPSGTQWYRVTDTCDWNDGAST ---------------------------------------------------3-------- FVAPGSETLIGGAGTTYGQCGQSLLLLISK -------------------3---------- >CAMPATH-1G ANTIBODY; SWP:NA; PDB:1BFOA; DIKMTQSPSFLSASVGDRVTLNCKASQNIDKYLNWYQQKLGESPKLLIYNTNNLQTGIPS ----------------------1------------------------------------- RFSGSGSGTDFTLTISSLQPEDVATYFCLQHISRPRTFGTGTKLELKRANAAPTVSIFPP ---------------------------1-------------------------------- STEQLATGGASVVCLMNKFYPRDISVKWKIDGTERNGVLNSVTDQDSADSTYSMSSTLSL -------------2---------------------------------------------- TKADYQSHNLYTCQVVHKTSSSPVVAKNFNRNEC ------------2--------------------- >CAMPATH-1G ANTIBODY; SWP:NA; PDB:1BFOB; EVKLLESGGGLVQPGGSMRLSCAGSGFTFTDFYMNWIRQPAGKAPEWLGFIRDKAKGYTT ---------------------1-------------------------------------- EYNPSVKGRFTISRDNTQNMLYLQMNTLRAEDTATYYCAREGHTAAPFDYWGQGVMVTVS -------------------------------------1---------------------- SAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVHTFPAVLQS ---------------------------2-------------------------------- GLYTLTSSVTSSTWPSQTVTCNVAHPASSTKVDKKV --------------------2--------------- >FV4155; SWP:NA; PDB:1BFVH; QVQLQESGGGLVNLGGSMTLSCVASGFTFNTYYMSWVRQTPEKTLELVAAINSDGEPIYY ---------------------1-------------------------------------- PDTLKGRVTISRDNAKKTLYLQMSSLNFEDTALYYCARLNYAVYGMDYWGQGTTVTVSS -----------------------------------1----------------------- >FV4155; SWP:KV2G_MOUSE; PDB:1BFVL; DIELTQSPPSLPVSLGDQVSISCRSSQSLVSNNRRNYLHWYLQKPGQSPKLVIYKVSNRF ----------------------1------------------------------------- SGVPDRFSGSGSGTDFTLKISRVAAEDLGLYFCSQSSHVPLTFGSGTKLEIKR --------------------------------1-------------------- >ENDO-1,4-BETA-XYLANASE; SWP:P56588; PDB:1BG4; ASVSIDAKFKAHGKKYLGTIGDQYTLTKNTKNPAIIKADFGQLTPENSMKWDATEPNRGQ ------------------------------------------------------------ FTFSGSDYLVNFAQSNGKLIRGHTLVWHSQLPGWVSSITDKNTLISVLKNHITTVMTRYK ------------------------------------------------------------ GKIYAWDVLNEIFNEDGSLRNSVFYNVIGEDYVRIAFETARSVDPNAKLYINDYNLDSAG ------------------------------------------------------------ YSKVNGMVSHVKKWLAAGIPIDGIGSQTHLGAGAGSAVAGALNALASAGTKEIAITELDI ------------------------------------------------------------ AGASSTDYVNVVNACLNQAKCVGITVWGVADPDSWRSSSSPLLFDGNYNPKAAYNAIANA --------------1-----1--------------------------------------- L - >GRANULOCYTE COLONY-STIMUL; SWP:P35833; PDB:1BGC; SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPLSSCSSQ ----------------------------1-----1---------------------2--- SLQLRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA ------2----------------------------------------------------- PAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA -------------------------------------- >GRANULOCYTE COLONY-STIMUL; SWP:P35834; PDB:1BGEA; PLPQSFLLKCLEQMRKVQADGTALQETLCATHQLCHPEELVLLGHALGIPQPPLSSCSSQ ----------------------------1-----1---------------------2--- ALQLMGCLRQLHSGLFLYQGLLQALAGISPELAPTLDTLQLDTTDFAINIWQQMEDLGMA ------2----------------------------------------------------- PTMPAFTSAFQRRAGGVLVASNLQSFLELAYRALRHFAK --------------------------------------- >BGK; SWP:P29186; PDB:1BGK; VCRDWFKETACRHAKSLGNCRTSQKYRANCAKTCELC -1--------2--------3---------2---3--1 >BARLEY GRAIN PEROXIDASE; SWP:NA; PDB:1BGP; AEPPVAPGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASV -----------------1--------------------------------2----2---- LLDGSATGPGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVV --------------------------------------1------3-------------- SGGPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHT ------------------------------------------------------------ IGLAHCSSFEDRLFPRPDPTISPTFLSRLKRTCPAKGTDRRTVLDVRTPNVFDNKYYIDL -----4--------------------------4--------------------------- VNREGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRN ------------------------------------------------------------ CSVRNPGPG 3-------- >POLYGALACTURONASE; SWP:P26509; PDB:1BHE; SDSRTVSEPKTPSSCTTLKADSSTATSTIQKALNNCDQGKAVRLSAGSTSVFLSGPLSLP --------------1--------------------1------------------------ SGVSLLIDKGVTLRAVNNAKSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTID ----------------------------2---------2--------------------- GQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNFHVVFS ------------------------------------------------------------ DGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNI ------------------------------------------------------------ SILHNDFGTGHGMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVV ------------------------------------------------------------ MKNVAKPIVIDTVYEKKEGSNVPDWSDITFKDVTSETKGVVVLNGENAKKPIEVTMKNVK ------------------------------------------------------------ LTSDSTWQIKNVNVKK ---------------- >BETA-PUROTHIONIN; SWP:P01543; PDB:1BHP; KSCCKSTLGRNCYNLCRARGAQKLCANVCRCKLTSGLSCPKDFPK --12-------3---4--------4---3-2-------1------ >HEPATOCYTE GROWTH FACTOR; SWP:P14210; PDB:1BHTA; RRNTIHEFKKSAKTTLIKIDPALKIKTKKVNTADQCANRCTRNKGLPFTCKAFVFDKARK -----------------------------------1---2---------2---------- QCLWFPFNSMSSGVKKEFGHEFDLYENKDYIRNCIIGKGRSYKGTVSITKSGIKCQPWSS -1-------------------------------3--------------------4----- MIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEVE ----------------------5-----------4-----------5----3---- >METALLOPROTEINASE INHIBIT; SWP:P01077; PDB:1BHU; APSCPAGSLCTYSGTGLSGARTVIPASDMEKAGTDGVKLPASARSFANGTHFTLRYGPAR ---1-----1-------------------------------------------------- KVTCVRFPCYQYATVGKVAPGAQLRSLPSPGATVTVGQDLGD ---2----2--------------------------------- >P64K; SWP:Q51225; PDB:1BHY; GSADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNA --------------------------------------------1----1---------- AVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFL ------------------------------------------------------------ DPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPFIPEDPRIIDSSGALA ------------------------------------------------------------ LKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRF ------------------------------------------------------------ DNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAV ------------------------------------------------------------ TDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHKAYFDARVIPG ------------------------------------------------------------ VAYTSPEVAWVGETELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRII ------------------------------------------------------------ GGGIVGPNGGDMIGEVYLAIEMGCDAADIGKTIHPHPTLGESIGMAAEVALGTCTDLPPQ ------------------------------------------------------------ KK -- >Bromelain inhibitor [Prec; SWP:P27478; PDB:1BI6H; EEYKCYCTDTYSDCPGFCKTCKAEFGKYICLDLISPNDCVK -------------1---2--1--------2----------- >TOXIN BMTX1; SWP:Q9NII6; PDB:1BIG; FTDVKCTGSKQCWPVCKQMFGKPNGKCMNGKCRCYS -----1-----2---3----------1----2-3-- >HEMOLIN; SWP:P25033; PDB:1BIHA; KYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSL -----------------------1------------------------------------ VFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVL --------------1--------------------------------------------- PNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAK ------------------------------------------------------------ NAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYP -------------------------------------------------2---------- NYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLT ------------------------------------------2----------------- VVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSGLVI ------------------------------------------------------------ KGVKNGDKGYYGCRATNEHGDKYFETLVQVN ------------------------------- >MHC CLASS I H-2DD; SWP:P01900; PDB:1BIIA; GSHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYW ------------------------------------------------------------ ERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDG ----------------------------------------1------------------- CDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYLEGECVEWLRRYLKNGNATLL -------------------------------------------1---------------- RTDPPKAHVTHHRRPEGDVTLRCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGT ----------------------2------------------------------------- FQKWASVVVPLGKEQKYTCHVEHEGLPEPLTLRW ------------------2--------------- >BIKUNIN; SWP:P02760; PDB:1BIK; SCQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTCRTVAACNL -1--------2---------------3-------2------------3---1-----4-- PIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYCGV ------5---------------6-------5------------6---4-- >Prolactin-binding protein; SWP:Q9QV16; PDB:1BJ1H; EVQLVESGGGLVQPGGSLRLSCAASGYTFTNYGMNWVRQAPGKGLEWVGWINTYTGEPTY ---------------------1-------------------------------------- AADFKRRFTFSLDTSKSTAYLQMNSLRAEDTAVYYCAKYPHYYGSSHWYFDVWGQGTLVT -----------------------------------1------------------------ VSSASTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLY ------------------------------------------------------------ SLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK -------------------------------------- >D 2; SWP:Q28133; PDB:1BJ7; IDPSKIPGEWRIIYAAADNKDKIVEGGPLRNYYRRIECINDCESLSITFYLKDQGTCLLL -------------------------------------1---1--------------2--- TEVAKRQEGYVYVLEFYGTNTLEVIHVSENMLVTYVENYDGERITKMTEGLAKGTSFTPE ------------------------------------------------------------ ELEKYQQLNSERGVPNENIENLIKTDNCPP ---------------------------2-- >AGKISTRODOTOXIN; SWP:P14421; PDB:1BJJA; NLLQFNKMIKEETGKNAIPFYAFYGCYCGWGGQGKPKDGTDRCCFVHDCCYGRLVNCNTK -------------------------1-2--------------32----45------6--- SDIYSYSLKEGYITCGKGTNCEEQICECDRVAAECFRRNLDTYNNGYMFYRDSKCTETSE --------------7-----6----7-5------3-------------------1----- EC -4 >LOC - LAMBDA 1 TYPE LIGHT; SWP:NA; PDB:1BJMA; SVLTQPPSASGTPGQRVTISCSGSSSNIGENSVTWYQHLSGTAPKLLIYEDNSRASGVSD --------------------1--------------------------------------- RFSASKSGTSASLAISGLQPEDETDYYCAAWDDSLDVAVFGTGTKVTVLGQPKANPTVTL ---------------------------1-------------------------------- FPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSY ----------------2------------------------------------------- LSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS ---------------2------------------- >ANTIMICROBIAL PROTEIN 1; SWP:Q7M1F3; PDB:1BK8; LCNERPSQTWSGNCGNTAHCDKQCQDWEKASHGACHKRENHWKCFCYFNC -1-----------2-----3---4----------2--------3-4---1 >BMKTX; SWP:Q9NII7; PDB:1BKT; VGINVKCKHSGQCLKPCKDAGMRFGKCINGKCDCTPK ------1-----2---3---------1----2-3--- >CALCITONIN; SWP:P01262; PDB:1BKU; CSNLSTCVLGKLSQELHKLQTYPRTDVGAGTP 1-----1------------------------- >IMMUNOGLOBULIN OPG2 FAB, ; SWP:NA; PDB:1BM3H; EVQLVQSGGGLVNPGRSLKLSCAASGFTFSSYGMSWVRQTPEKRLEWVAAISGGGTYIHY ---------------------1-------------------------------------- PDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYYCTRHAMDHWGQGTSVTVSAAKTTPP -----------------------------------1------------------------ SVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSS --------------------2--------------------------------------- SVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRDC ---------------2-------------------- >IMMUNOGLOBULIN OPG2 FAB, ; SWP:NA; PDB:1BM3L; DELLTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYASQSISGIPS ----------------------1------------------------------------- RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPLTFGGGSKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >BETA=2=-MICROGLOBULIN; SWP:P01888; PDB:1BMG; IQRPPKIQVYSRHPPEDGKPNYLNCYVYGFHPPQIEIDLLKNGEKIKSEQSDLSFSKDWS ------------------------1----------------------------------- FYLLSHAEFTPNSKDQYSCRVKHVTLEQPRIVKWDRDL ------------------1------------------- >LQH III ALPHA-LIKE TOXIN; SWP:P56678; PDB:1BMR; VRDGYIAQPENCVYHCFPGSSGCDTLCKEKGGTSGHCGFKVGHGLACWCNALPDNVGIIV -----------1---2------3---4---------2---------3-4----------- EGEKCHS ----1-- >BOVINE NEUTROPHIL BETA-DE; SWP:P46170; PDB:1BNB; APLSCGRNGGVCIPIRCPVPMRQIGTCFGRPVKCCRSW ----1------2----3---------2------13--- >BRAIN DERIVED NEUROTROPHI; SWP:P23560; PDB:1BNDA; GQLSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEG -----1--------------------------------------------2--------- CRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIK 3-----------1----------------------------2-3----- >COLLAGEN XVIII; SWP:P39060; PDB:1BNLA; HSHRDFQPVLHLVALNAPLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSI --------------------------------1--------------------------- VRRADRAAVPIVNLKDELLFPSWEALFSGSEGPLKPGARIFSFDGKDVLRHPTWPQKSVW ------------------------------------------------------------ HGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCHHAYIVLCIENSF --------------2-----------------------------2-------1----- >MONOCYTE CHEMOATTRACTANT ; SWP:MCP3_HUMAN; PDB:1BO0; QPVGINTSTTCCYRFINKKIPKQRLESYRRTTSSHCPREAVIFKTKLDKEICADPTQKWV ----------12-----------------------1---------------2-------- QDFMKHLDKKTQTPKL ---------------- >ANTIBODY (CB 4-1); SWP:Q7TS98; PDB:1BOGA; DIKMTQSPSSMYTSLGERVTITCKASQDINSFLTWFLQKPGKSPKTLIYRANRLMIGVPS ----------------------1------------------------------------- RFSGSGSGQTYSLTISSLEYEDMGIYYCLQYDDFPLTFGAGTKLDLKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGTASVVCFLNNFYPKEINVKWKIDGSERQNGVLDSWTEQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >ANTIBODY (CB 4-1); SWP:NA; PDB:1BOGB; QDQLQQSGAELVRPGASVKLSCKALGYIFTDYEIHWVKQTPVHGLEWIGGIHPGSSGTAY ---------------------1-------------------------------------- NQKFKGKATLTADKSSTTAFMELSSLTSEDSAVYYCTRKDYWGQGTLVTVSAAKTTAPSV -----------------------------------1------------------------ YPLVPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSV ------------------2----------------------------------------- TVTSNTWPSQTITCNVAHPASSTKVDKKIEPRV -------------2------------------- >RIBONUCLEASE RH; SWP:P08056; PDB:1BOLA; SSCSSTALSCSNSANSDTCCSPEYGLVVLNMQWAPGYGPDNAFTLHGLWPDKCSGAYAPS --1------2--------31--------------------------------2------- GGCDSNRASSSIASVIKSKDSSLYNSMLTYWPSNQGNNNVFWSHEWSKHGTCVSTYDPDC --4------------------------------------------------4-------3 YDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITPGGTYTATEMQSAIESYFGAKAKI ------------------------------------------------------------ DCSSGTLSDVALYFYVRGRDTYVITDALSTGSCSGDVEYPTK -5------------------------------5--------- >Prolactin receptor [Precu; SWP:P16471; PDB:1BP3B; LPPGKPEIFKCRSPNKETFTCWWRPGTDGTNYSLTYHREGETLMHECPDYITGGPNSCHF ----------1---------1-------------------------2----------2-- GKQYTSMWRTYIMMVNATNSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKW ------------------------------------------------------------ SPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFAGQQTEFKILSLHPGQKYLVQVRCKPD ------------------------------------------------------------ HGYWSAWSPATFIQIPS ----------------- >PAPAIN; SWP:P00784; PDB:1BP4; IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDRRS ---------------------1---------------------------------2---- YGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNQGA --1-------------------------------2------------------------- LLYSIANQPVSVVLQAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGPNYILIKNSWGTG --------------------------------3--------------------------- WGENGYIRIKRGTGNSYGVCGLYTSSFYPVKN -------------------3------------ >BETA-MANNANASE; SWP:NA; PDB:1BQCA; ATGLHVKNGRLYEANGQEFIIRGVSHPHNWYPQHTQAFADIKSHGANTVRVVLSNGVRWS ------------------------------------------------------------ KNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQSGASTLDQAVDYWIELKSVLQGEEDY -------------1------1--------------------------------------- VLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNAD ------------------------------------------------------------ QVYASDPTGNTVFSIHMYGVYSQASTITSYLEHFVNAGLPLIIGEFGHDHSDGNPDEDTI ------------------------------------------------------------ MAEAERLKLGYIGWSWSGNGGGVEYLDMVYNFDGDNLSPWGERIFYGPNGIASTAKEAVI ------------------------------------------------------------ FG -- >T-cell surface glycoprote; SWP:P01731; PDB:1BQHG; KPQAPELRIFPKKMDAELGQKVDLVCEVLGSVSQGCSWLFQNSSSKLPQPTFVVYMASSH -------------------------1---------------------------------- NKITWDEKLNSSKLFSAMRDTNNKYVLTLNKFSKENEGYYFCSVISNSVMYFSSVVPVLQ -----------------------------------------1------------------ KV -- >GP130; SWP:P40189; PDB:1BQUA; GLPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSC -----------1---------1---------------------------2---------2 TVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSLSSILKLTW ------------------------------------------------------------ TNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKE ------------------------------------------------------------ DGKGYWSDWSEEASGITYEDRPSKEPSF ---------------------------- >METALLOPROTEINASE-2 INHIB; SWP:P16035; PDB:1BR9; CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPEKDI 1-2---------3----------------------------------------------- EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSTTQKKSLNH -----------1----------------------------2------------------- RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKRSDGSCAWYRG -----3-4----5----5-------6--------------------6-------4----- AA -- >CATECHOL OXIDASE; SWP:Q9ZP19; PDB:1BT3A; APIQAPEISKCVVPPADLPPGAVVDNCCPPVASNIVDYKLPAVTTMKVRPAAHTMDKDAI ----------1---------------21-------------------------------- AKFAKAVELMKALPADDPRNFYQQALVHCAYCNGGYDQVNFPDQEIQVHNSWLFFPFHRW ----------------------------2------------------------------- YLYFYERILGKLIGDPSFGLPFWNWDNPGGMVLPDFLNDSTSSLYDSNRNQSHLPPVVVD ------------------------------------------------------------ LGYNGADTDVTDQQRITDNLALMYKQMVTNAGTAELFLGKAYRAGDAPSPGAGSIETSPH ------------------------------------------------------------ IPIHRWVGDPRNTNNEDMGNFYSAGRDIAFYCHHSNVDRMWTIWQQLARDYTDSDWLNAT ------------------------------------------------------------ FLFYDENGQAVKVRIGDSLDNQKMGYKYAKTPLPWL ------------------------------------ >ACTIVIN RECEPTOR TYPE II; SWP:P27038; PDB:1BTEA; ETQECLFFNANWERDRTNQTGVEPCYGRRHCFATWKNISGSIEIVKQGCWLDDINCYDRT ----1-------------------2-----1-----------------2------3---- DCIEKKDSPEVYFCCCEGNMCNEKFSYFPEME -4-----------435----5----------- >ACUTOLYSIN A; SWP:NA; PDB:1BUDA; FQRYMEIVIVVDHSMVKKYNGDSDSIKAWVYEMINTITESYSYLKIDISLSGLEIWSGKD ------------------------------------------------------------ LIDVEASAGNTLKSFGEWRAKDLIHRISHDNAQLLTATDFDGATIGLAYVASMCNPKRSV -----------------------------------------------------1------ GVIQDHSSVNRLVAITLAHEMAHNLGVSHDEGSCSCGGKSCIMSPSISDETIKYFSDCSY ---------------------------------2-3----3----------------2-- IQCRDYISKENPPCILN -------------1--- >BETA2-BUNGAROTOXIN; SWP:P00617; PDB:1BUNA; NLINFMEMIRYTIPCEKTWGEYADYGCYCGAGGSGRPIDALDRCCYVHDNCYGDAEKKHK --------------------------1-2--------------32-----4--------- CNPKTQSYSYKLTKRTIICYGAAGTCARIVCDCDRTAALCFGNSEYIEGHKNIDTARFCQ 5-----------------6------5----6-4------3------------------1- >Beta bungarotoxin B2 chai; SWP:P00989; PDB:1BUNB; RKRHPDCDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECLEY ------1--------2---------------3-------2------------3---1--- R - >PROTEINASE INHIBITOR IIA; SWP:P01001; PDB:1BUS; GAQVDCAEFKDPKVYCTRESNPHCGSNGETYGNKCAFCKAVMKSGGKINLKHRGKC -----1---------2-------3----------2--1-----------------3 >ALPHA-2-MACROGLOBULIN; SWP:P01023; PDB:1BV8A; EEFPFALGVQTLPQTCDEPKAHTSFQISLSVSYTGSRSASNMAIVDVKMVSGFIPLKPTV ---------------1-------------------------------------------- KMLERSNHVSRTEVSSNHVLIYLDKVSNQTLSLFFTVLQDVPVRDLKPAIVKVYDYYETD ------------------------------------------------------------ EFAIAEYNAPCSKDLGNA ----------1------- >HULYS11; SWP:P00698; PDB:1BVKA; DIQMTQSPSSLSASVGDRVTITCRASGNIHNYLAWYQQKPGKAPKLLIYYTTTLADGVPS ----------------------1------------------------------------- RFSGSGSGTDYTFTISSLQPEDIATYYCQHFWSTPRTFGQGTKVEIKR ---------------------------1-------------------- >Lysozyme C [Precursor]; SWP:P00698; PDB:1BVKB; QVQLQESGPGLVRPSQTLSLTCTVSGFSLTGYGVNWVRQPPGRGLEWIGMIWGDGNTDYN ---------------------1-------------------------------------- SALKSRVTMLKDTSKNQFSLRLSSVTAADTAVYYCARERDYRLDYWGQGSLVTVSS ----------------------------------1--------------------- >TRANSCRIPTION FACTOR GAMB; SWP:Q17034; PDB:1BVOA; PYVEITEQPHPKALRFRYECEGRSAGSIPGVNTTAEQKTFPSIQVHGYRGRAVVVVSCVT ------------------------------------------------------------ KEGPEHKPHPHNLVGKEGCKKGVCTVEINSTTMSYTFNNLGIQCVKKKDVEEALRLRQEI ------------------1----1------------------------------------ RVDPFRTGFGHAKEPGSIDLNAVRLCFQVFLEGQQRGRFTEPLTPVVSDIIYDKK ------------------------------------------------------- >ALPHA-BETA T CELL RECEPTO; SWP:A2NTY6; PDB:1BWMA; AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPD --------------------1--------------------------------------- GYKASRPSQENFSLILELATPSQTSVYFCASGGQGRAEQFFGPGTRLTVLGSDYKDDDDK ----------------------------1------------------------------- RSGGGGSGGGGSGGSGAQQQVRQSPQSLTVWEGETTILNCSYEDSTFDYFPWYRQFPGKS -------------------------------------------2---------------- PALLIAISLVSNKKEDGRFTIFFNKREKKLSLHITDSQPGDSATYFCAATGSFNKLTFGA --------------------------------------------------3--------- GTRLAVSPY --------- >NONSPECIFIC LIPID-TRANSFE; SWP:P24296; PDB:1BWOA; IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHN --1---------2-------------23-------------------4-1---------- LNEDNARSIPPKCGVNLPYTISLNIDCSRV ------------3-------------4--- >AGGLUTININ; SWP:Q38789; PDB:1BWUA; RNILRNDEGLYGGQSLDVNPYHFIMQEDCNLVLYDHSTSVWASNTGILGKKGCRAVLQSD ----------------------------1-----------------------1------- GNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYRSDIWSTN ---------------------------------------------- >II lectin [Precursor] [Fr; SWP:Q38785; PDB:1BWUD; RNILTNDEGLYGGQSLDVNPYHLIMQEDCNLVLYDHSTAVWSSNTDIPGKKGCKAVLQSD ----------------------------1-----------------------1------- GNFVVYDAEGASLWASHSVRGNGNYVLVLQEDGNVVIYRSDIWSTNTYR ------------------------------------------------- >IG KAPPA CHAIN V-I REGION; SWP:P01607; PDB:1BWWA; TPDIQMTQSPSSLSASVGDRVTITCQASQDIIKYLNWYQQKPGKAPKLLIYEASNLQAGV ------------------------1----------------------------------- PSRFSGSGSGTDYTFTISSLQPEDIATYYCQQYQSLPYTFGQGTKLQIT -----------------------------1------------------- >HLA class II histocompati; SWP:P04229; PDB:1BX2B; TRPRFLWQPKRECHFFNGTERVRFLDRYFYNQEESVRFDSDVGEFRAVTELGRPDAEYWN ------------1----------------------------------------------- SQKDILEQARAAVDTYCRHNYGVVESFTVQRRVQPKVTVYPSKTQPLQHHNLLVCSVSGF ----------------1-------------------------------------2----- YPGSIEVRWFLNGQEEKAGMVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTS --------------------------------------------------2--------- PLTVEWRARSE ----------- >HIRUSTASIN; SWP:P80302; PDB:1BX7; GNTCGGETCSAAQVCLKGKCVCNEVHCRIRCKYGLKKDENGCEYPCSCAKA ---1----2-----1----2-3----4---5----------3---4-5--- >PROTEIN (CMTI-I); SWP:NA; PDB:1BXJA; RVCPRILLECKKDSDCLAECVCLEHGYCG --1------2-----3---1-2-----3- >PENICILLOPEPSIN; SWP:P00798; PDB:1BXOA; AASGVATNTPTANDEEYITPVTIGGTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPS ------------------------------------------------------------ ATGKELSGYTWSISYGDGSSASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDG ------------------------------------------------------------ LLGLAFSSINTVQPQSQTTFFDTVKSSLAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLT ------------------------------------------------------------ YTGVDNSQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQDS ------------------------------------------------------------ NAGGYVFDCSTNLPDFSVSISGYTATVPGSLINYGPSGDGSTCLGGIQSNSGIGFSIFGD --------1---------------------------------1----------------- IFLKSQYVVFDSDGPQLGFAPQA ----------------------- >STREPTOCOCCAL SUPERANTIGE; SWP:NA; PDB:1BXTA; SSQPDPTPEQLNKSSQFTGVMGNLRCLYDNHFVEGTNVRSTGQLLQHDLIFPIKDLKLKN ------------------------------------------------------------ YDSVKTEFNSKDLATKYKNKDVDIFGSNYYYNCKTCMYGGVTEHHRNQIEGKFPNITVKV --------------------------------1--1------------------------ YEDNENILSFDITTNKKQVTVQELDCKTRKILVSRKNLYEFNNSPYETGYIKFIESSGDS ------------------------------------------------------------ FWYDMMPAPGAIFDQSKYLMLYNDNKTVSSSAIAIEVHLTKK ------------------------------------------ >MAC-2 BINDING PROTEIN; SWP:Q08380; PDB:1BY2; AVNDGDMRLADGGATNQGRVEIFYRGQWGTVCDNLWDLTDASVVCRALGFENATQALGRA -------------------------------1------------2--------------- AFGQGSGPIMLDEVQCTGTEASLADCKSLGWLKSNCRHERDAGVVCTNETTL ---------------3---------3---------1---------2------ >PLASMINOGEN ACTIVATOR INH; SWP:P05120; PDB:1BY7A; EDLCVANTLFALNLFKHLAKASPTQNLFLSPWSISSTMAMVYMGSRGSTEDQMAKVLQFN ---1-------------------------------------------------------- EVGAADKIHSSFRSLSSAINLLESVNKLFGEKSASFREEYIRLCQKYYSSEPQAVDFLEC ------------------------------------------------------------ AEEARKKINSWVKTQTKGKIPNLLPEGSVDGDTRMVLVNAVYFKGKWKTPFEKKLYPFRV ------------------------------------------------------------ NSAQRTPVQMMYLREKLNIGYIEDLKAQILELPYAGDVSMFLLLPDEIADVSTGLELLES ------------------------------------------------------------ EITYDKLNKWTSKDKMAEDEVEVYIPQFKLEEHYELRSILRSMGMEDAFNKGRANFSGMS ------------------------------------------------------------ ERNDLFLSEVFHQAMVDVNEEGTGPQFVADHPFLFLIMHKITNCILFFGRFSSP -------------------------------------------1---------- >POLYANDROCARPA LECTIN; SWP:P16108; PDB:1BYFA; DYEILFSDETMNYADAGTYCQSRGMALVSSAMRDSTMVKAILAFTEVKGHDYWVGADNLQ -------------------1---------------------------------------- DGAYNFLWNDGVSLPTDSDLWSPNEPSNPQSWQLCVQIWSKYNLLDDVGCGGARRVICEK ----------------------------------2--------------2-------1-- ELD --- >ANTIBODY R24 (LIGHT CHAIN; SWP:NA; PDB:1BZ7A; DIQMTQITSSLSVSLGDRVIISCRASQDIGNFLNWYQQKPDGSLKLLIYYTSRLQSGVPS ----------------------1------------------------------------- RFSGWGSGTDYSLTISNLEEEDIATFFCQQGKTLPYTFGGGTKLEIKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVT -------------2------------ >ANTIBODY R24 (LIGHT CHAIN; SWP:NA; PDB:1BZ7B; DVQLVESGGGLVQPGGSRKLSCAASGFTFSNFGMHWVRQAPEKGLEWVAYISSGGSSINY ---------------------1-------------------------------------- ADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAIYYCTRGGTGTRSLYYFDYWGQGATLIV -----------------------------------1------------------------ SSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQ ----------------------------2------------------------------- SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDK -----------------------2------------- >RNASE A; SWP:NA; PDB:1BZQK; QVQLVESGGGLVQAGGSLRLSCAASGYAYTYIYMGWFRQAPGKEREGVAAMDSGGGGTLY ---------------------1-------------------------------------- ADSVKGRFTISRDKGKNTVYLQMDSLKPEDTATYYCAAGGYELRDRTYGQWGQGTQVTVS -----------------------------------1------------------------ SRGR ---- >ANTIMICROBIAL PEPTIDE 1; SWP:P80915; PDB:1C01A; SAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAHTRFGSS ----------1---------2-3-------------------------3----------- ARACNPFGWKSIFIQC ---1-----------2 >ANTI-HEN EGG WHITE LYSOZY; SWP:P01642; PDB:1C08A; DIVLTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPS ----------------------1------------------------------------- RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIK ---------------------------1------------------- >ANTIBODY FRAGMENT FAB; SWP:NA; PDB:1C12A; DIELTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFKGLIYHGTNLEDGVPS ----------------------1------------------------------------- RFSGSGSGADYSLTISSLESEDFADYYCVQYVQFPFTFGSGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEA -------------2-------------------- >MHC-LIKE PROTEIN T22; SWP:Q9BCZ1; PDB:1C16A; GSHSLRYFYTAVSRPGLGEPWFIIVGYVDDMQVLRFSSKEETPRMAPWLEQEEADNWEQQ ------------------------------------------------------------ TRIVTIQGQLSERNLMTLVHFYNKSMDDSHTLQWLQGCDVEPDRHLCLWYNQLAYDSEDL -------------------------------------1--------2------------- PTLNENPSSCTVGNSTVPHISQDLKSHCSDLLQKYLEKGKERLLRSDPPKAHVTRHPRPE ---------2-----------------1-------------------------------- GDVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWAAVVVPLGKEQS ------3----------------------------------------------------- YTCHVYHEGLPEPLILRWGG --3----------------- >FLAVOCETIN-A: ALPHA SUBUN; SWP:Q8AV97; PDB:1C3AA; DFDCIPGWSAYDRYCYQAFSKPKNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEK ---1----------1----------------2---------------------------- IKTSFQYVWIGLRIQNKEQQCRSEWSDASSVNYENLVKQFSKKCYALKKGTELRTWFNVY -------------------------------------------3---------------- CGTENPEVCKYTPEC 3-------2------ >Flavocetin-A beta chain; SWP:Q8AV98; PDB:1C3AB; GFCCPLGWSSYDEHCYQVFQQKMNWEDAEKFCTQQHKGSHLVSFHSSEEVDFVTSKTFPI ---1----------1----------------2---------------------------- LKYDFVWIGLSNVWNECTKEWSDGTKLDYKAWSGGSDCIVSKTTDNQWLSMDCSSKYYVV -------------------------------------3--------------3------- CKFQA 2---- >C3D; SWP:P01024; PDB:1C3D; MLDAERLKHLIVTPSGAGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGY ------------------------------------------------------------ TQQLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQK -----------------------------------------------1------------ PDGVFQEDAPVIHQEMIGGLRNNNEKDMALTAFVLISLQEAKDICEEQVNSLPGSITKAG --------------------------------------------1--------------- DFLEANYMNLQRSYTVAIAGYALAQMGRLKGPLLNKFLTTAKDKNRWEDPGKQLYNVEAT ------------------------------------------------------------ SYALLALLQLKDFDFVPPVVRWLNEQRYYGGGYGSTQATFMVFQALAQYQKDAP ------------------------------------------------------ >THP12 CARRIER PROTEIN; SWP:Q27011; PDB:1C3YA; ETPREKLKQHSDACKAESGVSEESLNKVRNREEVDDPKLKEHAFCILKRAGFIDASGEFQ -------------1------------------------------1--------------- LDHIKTKFKENSEHPEKVDDLVAKCAVKKDTPQHSSADFFKCVHDNRS ------------------------2----------------2------ >SHIGA-LIKE TOXIN I B SUBU; SWP:P08027; PDB:1C48A; TPDCVTGKVEYTKYNDDDTFTVKVGDKELFTNRWNLQSLLLSAQITGMTVTIKTNACHNG ---1----------------------------------------------------1--- GTFSEVIFR --------- >TOXIN K-BETA; SWP:P55928; PDB:1C49A; TISCTNEKQCYPHCKKETGYPNAKCMNRKCKCFGR ---1---------2----------1------2--- >GURMARIN; SWP:P25810; PDB:1C4EA; QCVKKDELCIPYYLDCCEPLECKKVNWWDHKCIG -1------2------31----2---------3-- >SHIGA-LIKE TOXIN I SUBUNI; SWP:P08027; PDB:1C4QA; TPDCVTGKVEYTKYNDDDTFTVKVGDKELATNRANLQSLLLSAQITGMTVTIKTNACHNG ---1----------------------------------------------------1--- GGFSEVIFR --------- >BUTANTOXIN; SWP:P59936; PDB:1C55A; WCSTCLDLACGASRECYDPCFKAFGRAHGKCMNNKCRCYT -1--1----2-----3---4----------2----3-4-- >CHIMERIC DECARBOXYLASE AN; SWP:NA; PDB:1C5CL; EIQLTQSPSSLSASLGERVSLTCRTSQEISGYLSWLQQKPDGTIKRLIYDATKLDSGAPK ----------------------1------------------------------------- RFSGSRSGSDYSLTISSLESEDFADYYCLQYASFPRTFGGGTKLEIKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC -------------2-------------------- >MONOCLONAL ANTIBODY AGAIN; SWP:NA; PDB:1C5DH; EVKLLESGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYN ---------------------1-------------------------------------- SALKSRLSINRDTSKSQVFLKMNSLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQT ----------------------------------1------------------------- TAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVHTFPAVLQSGLYT -----------------------2------------------------------------ LTSSVTSSTWPSQTVTCNVAHPASSTKVDKKLER ----------------2----------------- >MONOCLONAL ANTIBODY AGAIN; SWP:NA; PDB:1C5DL; DIQMTQSPPSLSASLGDKVTITCQASQDINKYIAWYQQKPGKAPRQLIRYTSILVLGTPS ----------------------1------------------------------------- RFSGSGSGRDFSFSISNVASEDIASYYCLQYGNLYTFGAGTKLEIKRADAAPTVSIFPPS ---------------------------1-------------------------------- TEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSL ------------2----------------------------------------------- TKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC ------------2-------------------- >MAUROCALCIN; SWP:P60254; PDB:1C6WA; GDCLPHLKLCKENKDCCSKKCKRRGTNIEKRCR --1------2-----31---2----------3- >ZINC ENDOPROTEASE; SWP:P56406; PDB:1C7KA; TVTVTYDPSNAPSFQQEIANAAQIWNSSVRNVQLRAGGNADFSYYEGNDSRGSYAQTDGH ------------------------------------------------------------ GRGYIFLDYQQNQQYDSTRVTAHETGHVLGLPDHYQGPCSELMSGGGPGPSCTNPYPNAQ --------------------------------------1------------1-------- ERSRVNALWANG ------------ >BETA-N-ACETYLHEXOSAMINIDA; SWP:Q54468; PDB:1C7SA; DQQLVDQLSQLKLNVKMLDNRAGENGVDCAALGADWASCNRVLFTLSNDGQAIDGKDWVI ----------------------------1---------1--------------------- YFHSPRQTLRVDNDQFKIAHLTGDLYKLEPTAKFSGFPAGKAVEIPVVAEYWQLFRNDFL ------------------------------------------------------------ PRWYATSGDAKPKMLANTDTENLDQFVAPFTGDQWKRTKDDKNILMTPASRFVSNADLQT ------------------------------------------------------------ LPAGALRGKIVPTPMQVKVHAQDADLRKGVALDLSTLVKPAADVVSQRFALLGVPVQTNG ------------------------------------------------------------ YPIKTDIQPGKFKGAMAVSGAYELKIGKKEAQVIGFDQAGVFYGLQSILSLVPSDGSGKI ------------------------------------------------------------ ATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLNKFHFHLSDDEGWRIEIP ------------------------------------------------------------ GLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVIPEI ------------2-------2--------------------------------------- DMPAHARAAVVSMEARYKKLHAAGKEQEANEFRLVDQTDTSNTTSVQFFNRQSYLNPCLD ---------------------------------------------------------3-- SSQRFVDKVIGEIAQMHKEAGQPIKTWHFGGAEAKNIRLGAGYTDKAKPEPGKGIIDQSN ------------------------------------------------------------ EDKPWAKSQVCQTMIKEGKVADMEHLPSYFGQEVSKLVKAHGIDRMQAWQDGLKDAESSK ----------3------------------------------------------------- AFATSRVGVNFWDTLYWGGFDSVNDWANKGYEVVVSNPDYVYMDFPYEVNPDERGYYWGT ------------------------------------------------------------ RFSDERKVFSFAPDNMPQNAETSVDRDGNHFNAKSDKPWPGAYGLSAQLWSETQRTDPQM ------------------------------------------------------------ EYMIFPRALSVAERSWHRAGWEQDYRAGREYKGGETHFVDTQALEKDWLRFANILGQREL ------------------------------------------------------------ AKLDKGGVAYRLPVPGARVAGGKLEANIALPGLGIEYSTDGGKQWQRYDAKAKPAVSGEV ------------------------------------------------------------ QVRSVSPDGKRYSRAEKV ------------------ >CYTOTOXIN 2; SWP:P01441; PDB:1CB9A; LKCKKLVPLFSKTCPAGKNLCYKMFMVAAPHVPVKRGCIDVCPKSSLLVKYVCCNTDKCN --1----------2------1----------------2---3----------34----4- >CYANOGENIC BETA-GLUCOSIDA; SWP:P26205; PDB:1CBG; FKPLPISFDDFSDLNRSCFAPGFVFGTASSAFQYEGAAFEDGKGPSIWDTFTHKYPEKIK ------------------------------------------------------------ DRTNGDVAIDEYHRYKEDIGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNL ------------------------------------------------------------ INEVLANGMQPYVTLFHWDVPQALEDEYRGFLGRNIVDDFRDYAELCFKEFGDRVKHWIT ------------------------------------------------------------ LNEPWGVSMNAYAYGTFAPGRCSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLYKTK ---------------------1-------1------------------------------ YQASQNGIIGITLVSHWFEPASKEKADVDAAKRGLDFMLGWFMHPLTKGRYPESMRYLVR ------------------------------------------------------------ KRLPKFSTEESKELTGSFDFLGLNYYSSYYAAKAPRIPNARPAIQTDSLINATFEHNGKP ------------------------------------------------------------ LGPMAASSWLCIYPQGIRKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTPRI ------------------------------------------------------------ DYYYRHLYYVLTAIGDGVNVKGYFAWSLFDNMEWDSGYTVRFGLVFVDFKNNLKRHPKLS ------------------------------------------------------------ AHWFKSFLKK ---------- >PROTEIN (FAB (BV04-01) AU; SWP:NA; PDB:1CBVH; EVQPVETGGGLVQPKGSLKLSCAASGFSFNTNAMNWVRQAPGKGLEWVARIRSKSNNYAT ---------------------1-------------------------------------- YYADSVKDRFTISRDDSQNMLYLQMNNLKTEDTAMYYCVRDQTGTAWFAYWGQGTLVTVS -------------------------------------1---------------------- AAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQS ---------------------------2-------------------------------- GLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLE ----------------------2---------------- >CYTOCHROME C5; SWP:P11732; PDB:1CC5; GGGARSGDDVVAKYCNACHGTGLLNAPKVGDSAAWKTRADAKGGLDGLLAQSLSGLNAMP ------------------------------------------------------------ PKGTCADCSDDELKAAIGKMSGL ----1--1--------------- >CHYMOTRYPSIN INHIBITOR; SWP:P56682; PDB:1CCVA; EECGPNEVFNTCGSACAPTCAQPKTRICTMQCRIGCQCQEGFLRNGEGACVLPENC --1--------2---3---4-------3---2---1-5-----------5-----4 >CD58; SWP:P19256; PDB:1CCZA; FSQQIYGVVYGNVTFHVPSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSG ------------------------------------------------------------ SLTIYNLTSSDEDEYEMESPNITDTMKFFLYVLEMVSKPMIYWECSNATLTCEVLEGTDV --------------------------------------------1------2-------- ELKLYQGKEHLRSLRQKTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNCPE -------------------------------2----------------1-- >GRANULOCYTE COLONY-STIMUL; SWP:P09919; PDB:1CD9A; GPASSLPQSFLLKCLEQVRKIQGDGAALQEKLCATYKLCHPEELVLLGHSLGIPWAPLSS --------------------------------1-----1--------------------- CPSQALQLAGCLSQLHSGLFLYQGLLQALEGISPELGPTLDTLQLDVADFATTIWQQMEE 2---------2------------------------------------------------- LGMAPALQPTQGAMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRHLAQP --------------------------------------------------- >Granulocyte colony-stimul; SWP:P40223; PDB:1CD9B; AGYPPASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCV ------------1----------1------------------------2---------3- AKKRQNNCSIPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDPMDVVKLEPPMLQALDIQ -------3-------------------------------2-------------------- PGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTL --4-----------------5----------------------------4---------- QMRCIRSSLPGFWSPWSPGLQLRPTM ---5---------------------- >CD59; SWP:P13987; PDB:1CDQ; LQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQVYNKCWKFEHCNFNDVTTRLRENELT --1--2------2-----3------1------------3-----4--------------- YYCCKKDLCNFNEQLEN --45----5-------- >CARDIOTOXIN VII4; SWP:P01452; PDB:1CDTA; LKCNKLIPIAYKTCPEGKNLCYKMMLASKKMVPVKRGCINVCPKNSALVKYVCCSTDRCN --1----------2------1----------------2---3----------34----4- >CAMPATH-1H:LIGHT CHAIN; SWP:NA; PDB:1CE1H; QVQLQESGPGLVRPSQTLSLTCTVSGFTFTDFYMNWVRQPPGRGLEWIGFIRDKAKGYTT ---------------------1-------------------------------------- EYNPSVKGRVTMLVDTSKNQFSLRLSSVTAADTAVYYCAREGHTAAPFDYWGQGSLVTVS -------------------------------------1---------------------- SASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS ---------------------------2-------------------------------- SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVE -----------------------2---------------- >IGKC protein; SWP:Q6GMW1; PDB:1CE1L; DIQMTQSPSSLSASVGDRVTITCKASQNIDKYLNWYQQKPGKAPKLLIYNTNNLQTGVPS ----------------------1------------------------------------- RFSGSGSGTDFTFTISSLQPEDIATYYCLQHISRPRTFGQGTKVEIKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNR -------------2----------------- >Beta-galactoside-specific; SWP:Q6ITZ3; PDB:1CE7B; CSASEPTVRIVGRNGMNVDVRDDDFHDGNQIQLWPSKSNNDPNQLWTIKRDGTIRSNGSC -----------------------------------------------------------1 LTTYGYTAGVYVMIFDCATAVGEATVWQIWGNGTIINPRSNLVLAASSGIKGTTLTVQTL ----------------1------------------------------------------- DYTLGQGWLAGNDTAPREVTIYGFNDLCMESGGGSVTVETCSSGKADKWALYGDGSIRPE ---------------------------2------------2------------------- QNQAQCLTSGGDSVAGVNIVSCSGAASGQRWVFTNEGAILNLKNGLAMDVANPGGGRIII -----3---------------3-------------------------------------- YPATGKPNQMWLPVF --------------- >MEROZOITE SURFACE PROTEIN; SWP:P04933; PDB:1CEJA; NISQHQCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADA ------1----2-----1---------2-3----------3-------4------5---- KCTEEDSGSNGKKITCECTKPDSYPLFDGIFCSSSN -4-------------5-6-------------6---- >Cystatin [Precursor]; SWP:P01038; PDB:1CEWI; GAPVPVDENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKYILQVEIGR ------------------------------------------------------------ TTCPKSSGDLQSCEFHDEPEMAKYTTCTFVVYSIPWLNQIKLLESKCQ --1---------1-------------2-------------------2- >CUTINASE; SWP:P00590; PDB:1CEX; RTTRDDLINGNSASCADVIFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGA --------------1--------------------------------------------- YRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSA --------------------------------1--------------------------- IRDKIAGTVLFGYTKNLQNRGRIPNYPADRTKVFCNTGDLVCTGSLIVAAPHLAYGPDAR ----------------------------------2------2------------------ GPAPEFLIEKVRAVRGS ----------------- >GLUCOSE OXIDASE; SWP:P13006; PDB:1CF3A; GIEASLLTDPKDVSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPII ------------------------------------------------------------ EDLNAYGDIFGSSVDHAYETVELATNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSW ------------------------------------------------------------ ETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGPRDTGDDY -----------------------------------------1------------------ SPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNL -----------------------1------------------------------------ QVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSG ------------------------------------------------------------ IGMKSILEPLGIDTVVDLPVGLNLQDQTTATVRSRITSAGAGQGQAAWFATFNETFGDYS ------------------------------------------------------------ EKAHELLNTKLEQWAEEAVARGGFHNTTALLIQYENYRDWIVNHNVAYSELFLDTAGVAS ------------------------------------------------------------ FDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNISNSGAMQT ------------------------------------------------------------ YFAGETIPGDNLAYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEMGGVVDNAARVYGVQ ------------------------------------------------------------ GLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDYASMQ ----------------------------------------- >COMPLEMENT 5A SEMI-SYNTHE; SWP:P01031; PDB:1CFAA; MLQKKIEEIAAKYKHSVVKKCCYDGASVNNDETCEQRAARISLGPRCIKAFTECCVVASQ --------------------12-----------3------------1------23----- LRANISHKDMC ----------- >DROSOPHILA NEUROGLIAN; SWP:P20241; PDB:1CFB; IVQDVPNAPKLTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPN ---------------1-------------------------------------------- TDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNN ------------------------------------1----------------------- LVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIK ------------------------------------------------------------ VVAINDRGESNVAAEEVVGYSGEDR ------------------------- >COAGULATION FACTOR IX; SWP:P00740; PDB:1CFH; YNSGKLEEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYVD -----------------1----1------------------------ >MONOCLONAL ANTIBODY FV415; SWP:NA; PDB:1CFVH; QVQLQESGGGLVNLGGSMTLSCVASGFTFNTYYMSWVRQTPEKTLELVAAINSDGEPIYY ---------------------1-------------------------------------- PDTLKGRVTISRDNAKKTLYLQMSSLNFEDTALYYCARLNYAVYGMDYWGQGTTVTVSS -----------------------------------1----------------------- >MONOCLONAL ANTIBODY FV415; SWP:KV2G_MOUSE; PDB:1CFVL; DIELTQSPPSLPVSLGDQVSISCRSSQSLVSNNRRNYLHWYLQKPGQSPKLVIYKVSNRF ----------------------1------------------------------------- SGVPDRFSGSGSGTDFTLKISRVAAEDLGLYFCSQSSHVPLTFGSGTKLEIKR --------------------------------1-------------------- >IGG2B-KAPPA NC6.8 FAB (HE; SWP:NA; PDB:1CGSH; RVQLLESGAELMKPGASVQISCKATGYTFSEYWIEWVKERPGHGLEWIGEILPGSGRTNY ---------------------1-------------------------------------- REKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCTRGYSSMDYWGQGTSVTVSAAKTT -----------------------------------1------------------------ PPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTM ----------------------2------------------------------------- SSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLE -----------------2---------------- >CYCLODEXTRIN GLYCOSYL-TRA; SWP:P30920; PDB:1CGT; DPDTAVTNKQSFSTDVIYQVFTDRFLDGNPSNNPTGAAYDATCSNLKLYCGGDWQGLINK ------------------------------------------1------1---------- INDNYFSDLGVTALWISQPVENIFATINYSGVTNTAYHGYWARDFKKTNPYFGTMADFQN ------------------------------------------------------------ LITTAHAKGIKIVIDFAPNHTSPAMETDTSFAENGRLYDNGTLVGGYTNDTNGYFHHNGG ------------------------------------------------------------ SDFSSLENGIYKNLYDLADFNHNNATIDKYFKDAIKLWLDMGVDGIRVDAVKHMPLGWQK ------------------------------------------------------------ SWMSSIYAHKPVFTFGEWFLGSAASDADNTDFANKSGMSLLDFRFNSAVRNVFRDNTSNM ------------------------------------------------------------ YALDSMINSTATDYNQVNDQVTFIDNHDMDRFKTSAVNNRRLEQALAFTLTSRGVPAIYY ------------------------------------------------------------ GTEQYLTGNGDPDNRAKMPSFSKSTTAFNVISKLAPLRKSNPAIAYGSTQQRWINNDVYV ------------------------------------------------------------ YERKFGKSVAVVAVNRNLSTSASITGLSTSLPTGSYTDVLGGVLNGNNITSTNGSINNFT ------------------------------------------------------------ LAAGATAVWQYTTAETTPTIGHVGPVMGKPGNVVTIDGRGFGSTKGTVYFGTTAVTGAAI ------------------------------------------------------------ TSWEDTQIKVTIPSVAAGNYAVKVAASGVNSNAYNNFTILTGDQVTVRFVVNNASTTLGQ ------------------------------------------------------------ NLYLTGNVAELGNWSTGSTAIGPAFNQVIHQYPTWYYDVSVPAGKQLEFKFFKKNGSTIT ------------------------------------------------------------ WESGSNHTFTTPASGTATVTVNWQ ------------------------ >CHLOROTOXIN; SWP:P45639; PDB:1CHL; MCMPCFTTDHQMARKCDDCCGGKGRGKCYGPQCLCR -1--2----------3--14-------2----3-4- >Cardiotoxin-A4b; SWP:P07525; PDB:1CHVS; LKCNKLVPLFYKTCPAGKNLCYKMFMVSNKMVPVKRGCIDVCPKSSLLVKYVCCNTDRCN --1----------2------1----------------2---3----------34----4- >IG HEAVY CHAIN V REGIONS; SWP:NA; PDB:1CICB; QVQLQQPGSELVRPGASVKLSCKASGYTFTNYWMHWVKQRPGQGLEWIGNIYPGSGDSNY ---------------------1-------------------------------------- DEKFKSKATLTVDTSSSTAYMQLSGLTSEDSAVYYCARGLAFYFDHWGQGTTLTVSSALT -----------------------------------1------------------------ TPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPEPVTVTWNSGSLSSSVHTFPALLQSGLYT -----------------------2------------------------------------ MSSSVTVPSSTWPSETVTCSVAHPASSTTVDKKLEPS ------------------2------------------ >T CELL SURFACE GLYCOPROTE; SWP:P05540; PDB:1CID; TSITAYKSEGESAEFSFPLNLGEESLQGELRWKAEKAPSSQSWITFSLKNQKVSVQKSTS ------------------------------------------------------------ NPKFQLSETLPLTLQIPQVSLQFAGSGNLTLTLDRGILYQEVNLVVMKVTQPDSNTLTCE ----------------------------------------------------------1- VMGPTSPKMRLILKQENQEARVSRQEKVIQVQAPEAGVWQCLLSEGEEVKMDSKIQV ----------------------------------------1---------------- >NADP-MALATE DEHYDROGENASE; SWP:P46489; PDB:1CIVA; LPAKQKPECFGVFCLTYDLKAEEETKSWKKIINVAVSGAAGMISNHLLFKLASGEVFGPD --------1----1---------------------------------------------- QPISLKLLGSERSFAALEGVAMELEDSLYPLLRQVSIGIDPYEIFQDAEWALLIGAKPRG ------------------------------------------------------------ PGMERADLLDINGQIFAEQGKALNAVASPNVKVMVVGNPCNTNALICLKNAPNIPPKNFH ------------------------------------------------------------ ALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIHGIPVTEVIRDRK ------------------------------------------------------------ WLEDEFTNMVQTRGGVLIKKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFSTGVYTNGNP ------------------------------------------------------------ YGIAEDIVFSMPCRSKGDGDYEFVKDVIFDDYLSKKIKKSEDELLAEKKCVAHLTGEGIA -------------------------------------------------2---------- VCDLPEDTMLPGEM -2------------ >TACHYSTATIN A; SWP:Q9U8X3; PDB:1CIXA; YSRCQLQGFNCVVRSYGLPTIPCCRGLTCRSYFPGSTYGRCQRY ---1------2-----------31----2-----------3--- >ENTEROTOXIN TYPE C-3; SWP:Q06535; PDB:1CK1A; ESQPDPMPDDLHKSSEFTGTMGNMKYLYDDHYVSATKVKSVDKFLAHDLIYNINDKKLNN ------------------------------------------------------------ YDKVKTELLNEDLANKYKDEVVDVYGSNYYVNCYFSSKDNVGKVTSGKTCMYGGITKHEG --------------------------------1----------------1---------- NHFDNGNLQNVLIRVYENKRNTISFEVQTDKKSVTAQELDIKARNFLINKKNLYEFNSSP ------------------------------------------------------------ YETGYIKFIESNGNTFWYDMMPAPGDKFDQSKYLMIYKDNKMVDSKSVKIEVHLTTKNG ----------------------------------------------------------- >Alpha-amylase inhibitor A; SWP:P80403; PDB:1CLVI; CIPKWNRCGPKMDGVPCCEPYTCTSDYYGNCS 1------2--------31----2-------3- >CHARYBDOTOXIN, ALPHA CHIM; SWP:P13487; PDB:1CMR; CTTSKECWSVCQRLHNTSKGWCDHRGCICES 1-----2---3----------1----2-3-- >PROCHYMOSIN A/B PRECURSOR; SWP:P00794; PDB:1CMS; GEVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDP ----------------------------------------------1----1-------- RKSSTFQNLGKPLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFD ------------------------------------------------------------ GILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSL ------------------------------------------------------------ HWVPVTVQQYWQFTVDSVTISGVVVACEGGCQAILDTGTSKLVGPSSDILNIQQAIGATQ --------------------------2---2----------------------------- NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQDQGFCTSGFQSENHSQKWILGD ---------3--------------------------------3----------------- VFIREYYSVFDRANNLVGLAKAI ----------------------- >TOXIN 2; SWP:P01495; PDB:1CN2; KEGYLVDKNTGCKYECLKLGDNDYCLRECKQQYGKGAGGYCYAFACWCTHLYEQAIVWPL -----------1---2--------3---4-----------2----3-4------------ PNKRCS ----1- >CONCANAVALIN B; SWP:P49347; PDB:1CNV; DISSTEIAVYWGQREDGLLRDTCKTNNYKIVFISFLDKFGCEIRKPELELEGVCGPSVGN ----------------------1-----------------2------------3------ PCSFLESQIKECQRMGVKVFLALGGPKGTYSACSADYAKDLAEYLHTYFLSERREGPLGK -3---------1--------------------2--------------------------- VALDGIHFDIQKPVDELNWDNLLEELYQIKDVYQSTFLLSAAPGCLSPDEYLDNAIQTRH --------------------------------------------4--------------- FDYIFVRFYNDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELPASQATAPGGGYIP -------------4---------------------------------------------- PSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRYL ------------------------------------------- >NEMATODE ANTICOAGULANT PR; SWP:Q16938; PDB:1COUA; KATMQCGENEKYDSCGSKECDKKCKYDGVEEEDDEEPNVPCLVRVCHQDCVCEEGFYRNK -----1--------2----3---4----------------3----2---1-5-------- DDKCVSAEDCELDNMDFIYPGTRNP ---5-----4--------------- >SERINE CARBOXYPEPTIDASE; SWP:P00729; PDB:1CPY; KIKDPKILGIDPNVTQYTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLT -------------------------------------------------------1---- GLFFALGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVY ------------------------------------------------------------ NFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTD ------------------------------------------------------------ PLTQYNYYEPMACGEGGEPSVLPSEECSAMEDSLERCLGLIESCYDSQSVWSCVPATIYC ------------2-------------2---------3------4--------4------3 NNAQLAPYQRTGRNVYDIRKDCEGGNLCYPTLQDIDDYLNQDYVKEAVGAEVDHYESCNF ---------------------5-----5-----------------------------1-- DINRNFLFAGDWMKPYHTAVTDLLNQDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEE ------------------------------------------------------------ FASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPENALSMVNEWIHGGFS ------------------------------------------------------------ L - >VIRAL CHEMOKINE INHIBITOR; SWP:O73568; PDB:1CQ3A; SFSSSSSCTEEENKHHMGIDVIIKVTKQDQTPTNDKICQSVTEVTESEDESEEVVKGDPT -------1-----------------------------2---------------------- TYYTVVGGGLTMDFGFTKCPKISSISEYSDGNTVNARLSSVSPGQGKDSPAITREEALSM ------------------3----------------------------------------- IKDCEMSINIKCSEEEKDSNIKTHPVLGSNISHKKVSYEDIIGSTIVDTKCVKNLEISVR ---3-------4--------------------------------------4--------- IGDMCKESSELEVKDGFKYVDGSASEDAADDTSLINSAKLIACV ----1-------------------------------------2- >PROTEASE II; SWP:P82474; PDB:1CQDA; LPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTAN ---------------------1---------------------------------2---- HGCRGGWMNPAFQFIVNNGGINSEETYPYRGQDGICNSTVNAPVVSIDSYENVPSHNEQS --1--------------------------------2------------------------ LQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISANHALTVVGYGTENDKDFWIVKNS --------------------------------3--------------------------- WGKNWGESGYIRAERNIENPDGKCGITRFASYPVKK -----------------------3------------ >CH3 DOMAIN OF MAK33 ANTIB; SWP:P01869; PDB:1CQKA; PAAPQVYTIPPPLEQMAKDLVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMDTDG ------------------------1----------------------------------- SYFVYSKLNVQKSNWEAGNTFTCSVLHEGLHNHHTEKSLSH ----------------------1------------------ >CARDIOTOXIN II; SWP:P01442; PDB:1CRE; LKCNKLVPLFYKTCPAGKNLCYKMFMVSNLTVPVKRGCIDVCPKNSALVKYVCCNTDRCN --1----------2------1----------------2---3----------34----4- >LIPASE; SWP:P20261; PDB:1CRL; APTATLANGDTITGLNAIINEAFLGIPFAEPPVGNLRFKDPVPYSGSLDGQKFTSYGPSC -----------------------------------------------------------1 MQQNPEGTYEENLPKAALDLVMQSKVFEAVSPSSEDCLTINVVRPPGTKAGANLPVMLWI ------------------------------------1----------------------- FGGGFEVGGTSTFPPAQMITKSIAMGKPIIHVSVNYRVSSWGFLAGDEIKAEGSANAGLK ------------------------------------------------------------ DQRLGMQWVADNIAAFGGDPTKVTIFGESAGSMSVMCHILWNDGDNTYKGKPLFRAGIMQ ------------------------------------------------------------ SGAMVPSDAVDGIYGNEIFDLLASNAGCGSASDKLACLRGVSSDTLEDATNNTPGFLAYS ---------------------------2--------2----------------------- SLRLSYLPRPDGVNITDDMYALVREGKYANIPVIIGDQNDEGTFFGTSSLNVTTDAQARE ------------------------------------------------------------ YFKQSFVHASDAEIDTLMTAYPGDITQGSPFDTGILNALTPQFKRISAVLGDLGFTLARR ------------------------------------------------------------ YFLNHYTGGTKYSFLSKQLSGLPVLGTFHSNDIVFQDYLLGSGSLIYNNAFIAFATDLDP ------------------------------------------------------------ NTAGLLVKWPEYTSSSQSGNNLMMINALGLYTGKDNFRTAGYDALFSNPPSFFV ------------------------------------------------------ >PROTEIN (SOLUBLE QUINOPRO; SWP:P13650; PDB:1CRUA; DVPLTPSQFAKAKSENFDKKVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSV ------------------------------------------------------------ KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSKELPNQTIIRRYTYN ------------------------------------------------------------ KSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTP ------------------------------------------------------------ TQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGKLL ------------------------------------------------------------ QSEQGPNSDDEINLIVKGGNYGWPNVAGYKDDSGYAYANYSAAANKSIKDLAQNGVKVAA ------------------------------------------------------------ GVPVTKESEWTGKNFVPPLKTLYTVQDTYNYNDPTCGEMTYICWPTVAPSSAYVYKGGKK -----------------------------------1------1----------------- AITGWENTLLVPSLKRGVIFRIKLDPTYSTTYDDAVPMFKSNNRYRDVIASPDGNVLYVL ------------------------------------------------------------ TDTAGNVQKDDGSVTNTLENPGSLIKFT ---------------------------- >AXONIN-1; SWP:P28685; PDB:1CS6A; RSYGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVA ----------------------------1------------------------------- GDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVM ------------------1----------------------------------------- FTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSH --2---------------------------------------------------2----- IDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIK ------------------------------------------------3----------- WRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDV ---------------------------------3-------------------------- ITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLEDSGM ---------------4-------------------------------------------- YQCVAENKHGTVYASAELTVQA --4------------------- >HUMAN PROCATHEPSIN L; SWP:P07711; PDB:1CS8A; SLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAM ---------------------1-------------------------------------- NAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYE ----2------------------------------- >CATHEPSIN B; SWP:P07858; PDB:1CSBA; LPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTN -------------1----------------------------1---- >AZURIN ISO-2; SWP:P12335; PDB:1CUOA; ASCETTVTSGDTMTYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVA --1----------------------1---------------------------------- KEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFSM ------------------------------------------------------------ MRGTLKLEE --------- >TRIACYLGLYCEROL HYDROLASE; SWP:Q05489; PDB:1CVL; ADTYAATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNG ------------------------------------------------------------ RGEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRGSEFA ------------------------------------------------------------ DFVQDVLKTDPTGLSSTVIAAFVNVFGTLVSSSHNTDQDALAALRTLTTAQTATYNRNFP ------------------------------------------------------------ SAGLGAPGSCQTGAATETVGGSQHLLYSWGGTAIQPTSTVTGATDTSTGTLDVANVTDPS ---------1-------------------------------------------------- TLALLATGAVMINRASGQNDGLVSRCSSLFGQVISTSYHWNHLDEINQLLGVRGANAEDP -------------------------1---------------------------------- VAVIRTHVNRLKLQGV ---------------- >Basic fibroblast growth f; SWP:P11362; PDB:1CVSC; MPVAPYWTSPEKMEKKLHAVPAAKTVKFKCPSSGTPQPTLRWLKNGKEFKPDHRIGGYKV -----------------------------1------------------------------ RYATWSIIMDSVVPSDKGNYTCIVENEYGSINHTYQLDVVERSPHRPILQAGLPANKTVA ---------------------1-------------------------------------- LGSNVEFMCKVYSDPQPHIQWLKHIEVNGSKIGPDNLPYVQILKTAGVNTTDKEMEVLHL --------2--------------------------------------------------- RNVSFEDAGEYTCLAGNSIGLSHHSAWLTVL ------------2------------------ >Coagulation factor VII [P; SWP:P08709; PDB:1CVWH; IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKN ------1----1-------------2---------------2------ >TYPE IIA BACTERIOCIN LEUC; SWP:P34034; PDB:1CW6A; KYYGNGVHCTKSGCSVNWGEAFSAGVHRLANGGNGFW --------1----1----------------------- >INVASIN; SWP:P11922; PDB:1CWVA; LTLTAAVIGDGAPANGKTAITVEFTVADFEGKPLAGQEVVITTNNGALPNKITEKTDANG ------------------------------------------------------------ VARIALTNTTDGVTVVTAEVEGQRQSVDTHFVKGTIAADKSTLAAVPTSIIADGLMASTI ------------------------------------------------------------ TLELKDTYGDPQAGANVAFDTTLGNMGVITDHNDGTYSAPLTSTTLGVATVTVKVDGAAF ------------------------------------------------------------ SVPSVTVNFTADPIPDAGRSSFTVSTPDILADGTMSSTLSFVPVDKNGHFISGMQGLSFT ------------------------------------------------------------ QNGVPVSISPITEQPDSYTATVVGNSVGDVTITPQVDTLILSTLQKKISLFPVPTLTGIL ------------------------------------------------------------ VNGQNFATDKGFPKTIFKNATFQLQMDNDVANNTQYEWSSSFTPNVSVNDQGQVTITYQT ------------------------------------------------------------ YSEVAVTAKSKKFPSYSVSYRFYPNRWIYDGGRSLVSSLEASRQCQGSDMSAVLESSRAT --------------------------------------------1--------------- NGTRAPDGTLWGEWGSLTAYSSDWQSGEYWVKKTSTDFETMNMDTGALQPGPAYLAFPLC -----------------------------------------------------------1 ALSI ---- >CYTOCHROME B5; SWP:P82291; PDB:1CXYA; TLPVFTLEQVAEHHSPDDCWMAIHGKVYDLTPYVPNHPGPAGMMLVWCGQESTEAWETKS ------------------1----------------------------1------------ YGEPHSSLAARLLQRYLIGTL --------------------- >CYCLODEXTRIN GLUCANOTRANS; SWP:P31797; PDB:1CYG; AGNLNKVNFTSDVVYQIVVDRFVDGNTSNNPSGALFSSGCTNLRKYCGGDWQGIINKIND ---------------------------------------1------1------------- GYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDA ------------------------------------------------------------ AHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYDNGTLLGGYTNDANMYFHHNGGTTFS ------------------------------------------------------------ SLEDGIYRNLFDLADLNHQNPVIDRYLKDAVKMWIDMGIDGIRMDAVKHMPFGWQKSLMD ------------------------------------------------------------ EIDNYRPVFTFGEWFLSENEVDANNHYFANESGMSLLDFRFGQKLRQVLRNNSDNWYGFN ------------------------------------------------------------ QMIQDTASAYDEVLDQVTFIDNHDMDRFMIDGGDPRKVDMALAVLLTSRGVPNIYYGTEQ ------------------------------------------------------------ YMTGNGDPNNRKMMSSFNKNTRAYQVIQKLSSLRRNNPALAYGDTEQRWINGDVYVYERQ ------------------------------------------------------------ FGKDVVLVAVNRSSSSNYSITGLFTALPAGTYTDQLGGLLDGNTIQVGSNGSVNAFDLGP ------------------------------------------------------------ GEVGVWAYSATESTPIIGHVGPMMGQVGHQVTIDGEGFGTNTGTVKFGTTAANVVSWSNN ------------------------------------------------------------ QIVVAVPNVSPGKYNITVQSSSGQTSAAYDNFEVLTNDQVSVRFVVNNATTNLGQNIYIV ------------------------------------------------------------ GNVYELGNWDTSKAIGPMFNQVVYSYPTWYIDVSVPEGKTIEFKFIKKDSQGNVTWESGS ------------------------------------------------------------ NHVYTTPTNTTGKIIVDWQN -------------------- >POLYGALACTURONASE II; SWP:P26214; PDB:1CZFA; DSCTFTTAAAAKAGKAKCSTITLNNIEVPAGTTLDLTGLTSGTKVIFEGTTTFQYEEWAG --1--------------1------------------------------------------ PLISMSGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNT ------------------------------------------------------------ PLMAFSVQANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVN -------------------------------------------------------2---- SGENIWFTGGTCIGGHGLSIGSVGDRSNNVVKNVTIEHSTVSNSENAVRIKTISGATGSV -----------2------------------------------------------------ SEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPTNGVTIQDVKLESVTGSVDSGATEIYL ------------------------------------------------------------ LCGSGSCSDWTWDDVKVTGGKKSTACKNFPSVASC -3----3------------------4--------4 >COAGULATION FACTOR V; SWP:P12259; PDB:1CZTA; GCSTPLGMENGKIENKQITASSFKKSWWGDYWEPFRARLNAQGRVNAWQAKANNNKQWLE -1---------------------------------------------------------- IDLLKIKKITAIITQGCKSLSSEMYVKSYTIHYSEQGVEWKPYRLKSSMVDKIFEGNTNT ------------------------------------------------------------ KGHVKNFFNPPIISRFIRVIPKTWNQSITLRLELFGCDIY ------------------------------------1--- >ANTICOAGULANT PROTEIN; SWP:P17726; PDB:1D0DA; YNRLCIKPRDWIDECDSNEGGERAYFRNGKGGCDSFWICPEDHTGADYYSSYRDCFNACI ----1---------2-----------------3-----2---------------3---1- >TNFRSF10B/DR5; SWP:Q6UXM8; PDB:1D0GR; SSPSEGLCPPGHHISEDGRDCISCKYGQDYSTHWNDLLFCLRCTRCDSGEVELSPCTTTR -------1------------1--2---------------2--3--4---------3---- NTVCQCEEGTFREEDSPEMCRKCRTGCPRGMVKVGDCTPWSDIECVHK ---4-5-------------5--6---7---------6-------7--- >HORSE PLASMA GELSOLIN; SWP:Q28372; PDB:1D0NA; VEHPEFLKAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLH ------------------------------------------------------------ YWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVA ------------------------------------------------------------ SGFKHVVPNEVVVQRLLQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIYQWCGSKSN -----------------------------------------1------------1----- RFERLKATQVSKGIRDNERSGRAQVSVFEEGAEPEAMLQVLGPKPTLPEATEDTVKEDAA ------------------------------------------------------------ NRKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKGKQANME ------------------------------------------------------------ ERKAALKTASDFISKMDYPKQTQVSVLPEGGETPLFRQFFKNWRDPDQTEGLGLAYLSSH ------------------------------------------------------------ IAHVERVPFDAATLHTSTAMAAQHGMDDDGTGQKQIWRVEGSNKVPVDPATYGQFYGGDS ------------------------------------------------------------ YIILYNYRHGSRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPA ------------------------------------------------------------ HLMSLFGGKPMIVYKGGTSREGGQTAPASTRLFQVRASSSGATRAVEIIPKAGALNSNDA ------------------------------------------------------------ FVLKTPSAAYLWVGAGASEAEKTGAQELLRVLRAQPVQVAEGSEPDSFWEALGGKATYRT ------------------------------------------------------------ SPRLKDKKMDAHPPRLFACSNKIGRFVIEEVPGEFMQEDLATDDVMLLDTWDQVFVWVGK ------------------------------------------------------------ DSQDEEKTEALTSAKRYIDTDPAHRDRRTPITVVKQGFEPPSFVGWFLGWDDSYWSVDPL ------------------------------------------------------------ DRALAELAA --------- >HANATOXIN TYPE 1; SWP:P56852; PDB:1D1HA; ECRYLFGGCKTTSDCCKHLGCKFRDKYCAWDFTFS -1------2-----31----2------3------- >SEX HORMONE-BINDING GLOBU; SWP:P04278; PDB:1D2SA; PPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLR ------------------------------------------------------------ DGRPEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGHPI ------------------------------------------------------------ MRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQAEISASAPTSLRSC -------------------------1-----------------------1 >ACID PHOSPHATASE; SWP:Q9S1A6; PDB:1D2TA; GNDTTTKPDLYYLKNSEAINSLALLPPPPAVGSIAFLNDQAMYEQGRLLRNTERGKLAAE ------------------------------------------------------------ DANLSSGGVANAFSGAFGSPITEKDAPALHKLLTNMIEDAGDLATRSAKDHYMRIRPFAF ------------------------------------------------------------ YGVSTCNTQDKLSKNGSYPSGHTSIGWATALVLAEINPQRQNEILKRGYELGQSRVICGY -----1---------------------------------------------------1-- HWQSDVDAARVVGSAVVATLHTNPAFQQQLQKAKAEFAQHQK ------------------------------------------ >Myeloperoxidase [Precurso; SWP:P05164; PDB:1D2VC; VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSPACPGSNITIRNQINALTSFVDA --1---2-----1-----------------2----------------------------- SMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCF -----------------------------------------------3----------3- LAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITY ------------------------------------------------------------ RDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPM ------------------------------------------------------------ EPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRI ------------------------------------------------------------ GLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNN --------------------------4--------------------------------- IDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISL -----------------------4------------------------------------ PRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA ----5-------------------------5-------------- >CYCLODEXTRIN GLYCOSYLTRAN; SWP:P43379; PDB:1D3CA; APDTSVSNKQNFSTDVIYQIFTDRFSDGNPANNPTGAAFDGTCTNLRLYCGGDWQGIINK ------------------------------------------1------1---------- INDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQN ------------------------------------------------------------ LIAAAHAKNIKVIIDFAPNHTSPASSDQPSFAENGRLYDNGTLLGGYTNDTQNLFHHNGG ------------------------------------------------------------ TDFSTTENGIYKNLYDLADLNHNNSTVDVYLKDAIKMWLDLGIDGIRMNAVKHMPFGWQK ------------------------------------------------------------ SFMAAVNNYKPVFTFGQWFLGVNEVSPENHKFANESGMSLLDFRFAQKVRQVFRDNTDNM ------------------------------------------------------------ YGLKAMLEGSAADYAQVDDQVTFIDNHDMERFHASNANRRKLEQALAFTLTSRGVPAIYY ------------------------------------------------------------ GTEQYMSGGTDPDNRARIPSFSTSTTAYQVIQKLAPLRKCNPAIAYGSTQERWINNDVLI ------------------------------------------------------------ YERKFGSNVAVVAVNRNLNAPASISGLVTSLPQGSYNDVLGGLLNGNTLSVGSGGAASNF ------------------------------------------------------------ TLAAGGTAVWQYTAATATPTIGHVGPMMAKPGVTITIDGRGFGSSKGTVYFGTTAVSGAD ------------------------------------------------------------ ITSWEDTQIKVKIPAVAGGNYNIKVANAAGTASNVYDNFEVLSGDQVSVRFVVNNATTAL ------------------------------------------------------------ GQNVYLTGSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLKKQGSTV ------------------------------------------------------------ TWEGGSNHTFTAPSSGTATINVNWQP -------------------------- >DNA POLYMERASE; SWP:Q7SIG7; PDB:1D5AA; MILDADYITEDGKPVIRVFKKEKGEFKIDYDRDFEPYIYALLKDDSAIEDIKKITAERHG ------------------------------------------------------------ TTVRVTRAERVKKKFLGRPVEVWKLYFTHPQDVPAIRDKIREHPAVVDIYEYDIPFAKRY ------------------------------------------------------------ LIDRGLIPMEGDEELRMLAFDIETLAHAGAAAGAGPILMISYADEEGARVITWKNIDLPY ------------------------------------------------------------ VESVSTEKEMIKRFLKVIQEKDPDVLITYNGDNFDFAYLKKRSEMLGVKFILGRDGSEPK ------------------------------------------------------------ IQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLETVYEPVFGQPAEKVYAEEIAEAWA ------------------------------------------------------------ SGEGLERVARYSMEDAKATYELGKEFFPMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRK ------------------------------------------------------------ AYERNDVAPNKPDERELARRTESYAGGYVKEPEKGLWENIVYLDYKSLYPSIIITHNVSP ------------------------------------------------------------ DTLNREGCREYDVAPQVGHRFCKDFPGFIPSLLGDLLEERQKVKKKMKATVDPIERKLLD -------1-------------1-------------------------------------- YRQRAIKILANSYYGYYAYANARWYCRECAESVTAWGRQYIETTMREIEEKFGFKVLYAD -------------------------2--2------------------------------- TDGFFATIPGADAETVKNKAKEFLNYINPRLPGLLELEYEGFYRRGFFVTKKKYAVIDEE ------------------------------------------------------------ DKITTRGLEIVRRDWSEIAKETQARVLEAILKHGDVEEAVRIVKEVTEKLSRHEVPPEKL ------------------------------------------------------------ VIYEAGPHVAAAATVISYIVLKGPGRVGDRAIPFDEFDPAKHRYDAEYYIENQVLPAVER ------------------------------------------------------------ ILRAFGYRKEDLR ------------- >Enterotoxin type B [Precu; SWP:P01552; PDB:1D5MC; SQPDPKPDELHKSSKFTGLMENMKVLYDDNHVSAINVKSIDQFLYFDLIYSIKDTKLGNY ------------------------------------------------------------ DNVRVEFKNKDLADKYKDKYVDVFGANYYYQCYFSKKKRKTCMYGGVTEHNGNQLDKYRS -------------------------------1---------1------------------ ITVRVFEDGKNLLSFDVQTNKKKVTAQELDYLTRHYLVKNKKLYEFNNSPYETGYIKFIE ------------------------------------------------------------ NENSFWYDMMPAPGDKFDQSKYLMMYNDNKMVDSKDVKIEVYLTTK ---------------------------------------------- >HLA class II histocompati; SWP:P13760; PDB:1D5ZB; GDTRPRFLEQVKHECHFFNGTERVRFLDRYFYHQEEYVRFDSDVGEYRAVTELGRPDAEY --------------1--------------------------------------------- WNSQKDLLEQKRAAVDTYCRHNYGVGESFTVQRRVYPEVTVYPALLVCSVNGFYPGSIEV ------------------1----------------------------2------------ RWFRNGQEEKTGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSLTSPLTVEWR -------------------------------------------2---------------- A - >DEFENSIN-LIKE PEPTIDE-2; SWP:P82140; PDB:1D6BA; IMFFEMQACWSHSGVCRDKSERNCKPMAWTYCENRNQKCCEY --------1------2-------3-------2------13-- >CHOLECYSTOKININ TYPE A RE; SWP:P32238; PDB:1D6GA; MDVVDSLLVNGSNITPPCELGLENETLFCLDQPRPSKEWQPAQVILL -----------------1----------1------------------ >Bowman-Birk type proteina; SWP:P01055; PDB:1D6RI; KPCCDQCACTKSNPPQCRCSDMRLNSCHSACKSCICALSYPAQCFCVDITDFCYEPCK --12--3-4-------4-2-------5---6--5-7-------7-6------3---1- >Ig kappa chain C region; SWP:P01834; PDB:1D6VL; DIKMTQSPSSMYASLGERVTITCKASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPS ----------------------1------------------------------------- RFSGSGSGQDYSLTISSLEYEDMGIYYCLQYDEFPYTFGSGTKLEIKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNR -------------2----------------- >Coagulation factor VIII [; SWP:P00451; PDB:1D7PM; LNSCSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWL ---1-------------------------------------------------------- QVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSF ------------------------------------------------------------ TPVVNCLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQ -----------------------------------1--- >AK.1 SERINE PROTEASE; SWP:Q45670; PDB:1DBIA; WTPNDTYYQGYQYGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGKVIKGYDFV ------------------------------------------------------------ DNDYDPMDLNNHGTHVAGIAAAETNNATGIAGMAPNTRILAVRALDRNGSGTLSDIADAI ------------------------------------------------------------ IYAADSGAEVINLSLGCDCHTTTLENAVNYAWNKGSVVVAAAGNNSYENVIAVGAVDQYD ----------------1-1----------------------------------------- RLASFSNYGTWVDVVAPGVDIVSTITGNRYAYMSGTSMASPHVAGLAALLASQGRNNIEI ------------------------------------------------------------ RQAIEQTADKISGTGTYFKYGRINSYNAVTY ------------------------------- >CHLOROPLAST THIOREDOXIN M; SWP:P23400; PDB:1DBYA; MEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTD ------------------------------1--1-------------------------- ESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYLN ----------------------------------------------- >FRUCTOSE-1,6-BISPHOSPHATA; SWP:P46275; PDB:1DCUA; KRSGYEIITLTSWLLQQEQKGIIDAELTIVLSSISMACKQIASLVQRANISNLTGTEDQK ------------------------------------------------------------ KLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNLDAAVS ------------------------------------------------------------ TGSIFGIYSPNDECLPNTLGTEEQRCIVNVCQPGSNLLAAGYCMYSSSVIFVLTIGKGVF -------------1-----------1---------------------------------- VFTLDPLYGEFVLTQENLQIPKSGKIYSFNEGNYKLWDENLKKYIDDLKEPGPSGKPYSA ------------------------------------------------------------ RYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQRV ------------------------------------------------------------ LDIQPTEIHQRVPLYIGSTEEVEKVEKYLA ------------------------------ >PLASMINOGEN; SWP:P00747; PDB:1DDJA; SFDCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHC ---1---------2-------2---------------------3---------------3 LEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVIP ------------------------------------------------------------ ACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTE -1-------------4-----------------------------5-------------- LCAGHLAGGTDSCQGDAGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWI -5----------6---------4-----------------6------------------- EGVMRNN ------- >RIBONUCLEASE ALPHA-SARCIN; SWP:P00655; PDB:1DE3A; AVTWTCLNDQKNPKTNKYETKRLLYNQNKAESNSHHAPLSDGKTGSSYPHWFTNGYDGDG -----1------------------------------------------------------ KLPKGRTPIKFGKSDCDRPPKHSKDGNGKTDHYLLEFPTFPDGHDYKFDSKKPKENPGPA ---------------2-------------------------------------------- RVIYTYPNKVFCGIIAHTKENQGELKLCSH -----------2---------------1-- >Transferrin receptor prot; SWP:P02786; PDB:1DE4C; LYWDDLKRKLSEKLDSTDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSKV ------------------------------------------------------------ WRDQHFVKIQVKDSAQNSVIIVDKNGRLVYLVENPGGYVAYSKAATVTGKLVHANFGTKK ------------------------------------------------------------ DFEDLYTPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHA ------------------------------------------------------------ HLGTGDPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNMEGDCPSDWKTDS ---------------------------------------------------1-------- TCRMVTSESKNVKLTVSNVLKEIKILNIFGVIKGFVEPDHYVVVGAQRDAWGPGAAKSGV -1---------------------------------------------------------- GTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDFGSVGATEWLEGYLSSLHLKAFTY ------------------------------------------------------------ INLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLDNAA ------------------------------------------------------------ FPFLAYSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKL --------------2-2------------------------------------------- THDVELNLDYERYNSQLLSFVRDLNQYRADIKEMGLSLQWLYSARGDFFRATSRLTTDFG ------------------------------------------------------------ NAEKTDRFVMKKLNDRVMRVEYHFLSPYVSPKESPFRHVFWGSGSHTLPALLENLKLRKQ ------------------------------------------------------------ NNGAFNETLFRNQLALATWTIQGAANALSGDVWDI ----------------------------------- >DECORSIN; SWP:P17350; PDB:1DEC; APRLPQCQGDDQEKCLCNKDECPPGQCRFPRGDADPYCE ------1-------1-2----3----2----------3- >Immunoglobulin G-binding ; SWP:P02976; PDB:1DEEB; QVQLVESGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYY ---------------------1-------------------------------------- ADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVS -----------------------------------1------------------------ SGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVL ---------------------------2-------------------------------- RGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDVPL ---------------------------2--------------- >DENDROTOXIN I; SWP:P00979; PDB:1DEM; QPLRKLCILHRNPGRCYQKIPAFYYNQKKKQCEGFTWSGCGGNSNRFKTIEECRRTCIRK ------1--------2---------------3-------2------------3---1--- >Bowman-Birk type trypsin ; SWP:P01062; PDB:1DF9C; SHDEPSESSEPCCDSCDCTKSIPPQCHCANIRLNSCHSACKSCICTRSMPGKCRCLDTDD -----------12--3-4-------4-2-------5---6--5-7-------7-6----- FCYKPCESMDKD -3---1------ >IGG1-KAPPA 3D6 FAB (HEAVY; SWP:GC1_HUMAN; PDB:1DFBH; EVQLVESGGGLVQPGRSLRLSCAASGFTFNDYAMHWVRQAPGKGLEWVSGISWDSSSIGY ---------------------1-------------------------------------- ADSVKGRFTISRDNAKNSLYLQMNSLRAEDMALYYCVKGRDYYDSGGYFTVAFDIWGQGT -----------------------------------1------------------------ MVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFP --------------------------------2--------------------------- AVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC ----------------------------2-------------------- >IGKC protein; SWP:Q6GMX8; PDB:1DFBL; DIQMTQSPSTLSASVGDRVTITCRASQSISRWLAWYQQKPGKVPKLLIYKASSLESGVPS ----------------------1------------------------------------- RFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSFGPGTKVDIKRTVAAPSVFIFPPSD ---------------------------1-------------------------------- EQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLS -----------2------------------------------------------------ KADYEKHKVYACEVTHQGLSSPVTKSFNRGEC -----------2-------------------- >DEFENSIN HNP-3; SWP:NA; PDB:1DFNA; DCYCRIPACIAGERRYGTCIYQGRLWAFCC -1-2----3---------2---------31 >FERREDOXIN THIOREDOXIN RE; SWP:Q55389; PDB:1DJ7A; NNKTLAAMKNFAEQYAKRTDTYFCSDLSVTAVVIEGLARHKEELGSPLCPCRHYEDKEAE --------------------------------------------------1--------- VKNTFWNCPCVPMRERKECHCMLFLTPDNDFAGDAQDIPMETLEEVKAS --------------------1---------------------------- >PROTEIN HNS-DEPENDENT EXP; SWP:P26604; PDB:1DJ8A; NKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQ ---------1-----------------------------------------------1-- DKQANFKDKVKGEWDKIKK ------------------- >Heat-labile enterotoxin B; SWP:P32890; PDB:1DJRD; APQTITELCSEYRNTQIYTINDKILSYTESMAGKREMVIITFKSGETFQVEVPGSQHIDS --------1--------------------------------------------------- QKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMKN -------------------------1----------------- >FIBROBLAST GROWTH FACTOR ; SWP:P21802; PDB:1DJSA; TLEPEGAPYWTNTEKEKRLHAVPAANTVKFRCPAGGNPPTRWLKNGKEFKQEHRIGGYKV -------------------------------1---------------------------- RNQHWSLIESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSPHRPILQAGLPANASTVV --------------------1--------------------------------------- GGDVEFVCKVYSDAQPHIQWIKHVEKPYLKVLKAAGVNTTDKEIEVLYIRNVTFEDAGEY -------2---------------------------------------------------- TCLAGNSIGISFHSAWLTVLPA -2-------------------- >ALPHA-LIKE NEUROTOXIN BMK; SWP:P45697; PDB:1DJTA; VRDAYIAKPHNCVYECARNEYCNDLCTKNGAKSGYCQWVGKYGNGCWCIELPDNVPIRVP -----------1---2-----3---4---------2---------3-4------------ GKCH --1- >ANTIFUNGAL PEPTIDE; SWP:P81418; PDB:1DKCA; AGCIKNGGRCNASAGPPYCCSSYCFQIAGQSYGVCKNR --1------2--------31---2----------3--- >PHYTASE; SWP:P07102; PDB:1DKQA; QSEPELKLESVVIVSRAGVRAPTKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYLGH ------------------------------------------------------------ YQRQRLVADGLLAKKGCPQSGQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQTDTSS ----------------1------------------------------1------------ PDPLFNPLKTGVCQLDNANVTDAILSRAGGSIADFTGHRQTAFRELERVLNFPQSNLCLK ------------2--------------------------------------------3-- REKQDESCSLTQALPSELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDS -------3---------------------------------------------------- HQWNTLLSLHNAQFYLLQRTPEVARSRATPLLDLIKTALTPHPPQKQAYGVTLPTSVLFI ------------------------------------------------------------ AGHDTNLANLGGALELNWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQM ------------------------------------------------------------ RDKTPLSLNTPPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEARIPACSL ---------------------4--------4----------------2-- >J-ATRACOTOXIN-HV1C; SWP:P82228; PDB:1DL0A; AICTGADRPCAACCPCCPGTSCKAESNGVSYCRKDEP --1------2--33-41----2---------4----- >CLASS I ALPHA-1,2-MANNOSI; SWP:P32906; PDB:1DL2A; GAGEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLML ------------------------------------------------------------ MYNSSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEV ------------------------------------------------------------ GNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQM ------------------------------------------------------------ EFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSR ------------------------------------------------------------ GDSFYEYLLKQYLLTHETLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSP ------------------------------------------------------------ KMDHLVCFMGGLLASGSTEGLSIHEARRRPFFSKSDWDLAKGITDTCYQMYKQSSSGLAP ------1---------------------------------------1------------- EIVVFNDGNIKDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYREWGAEI ------------------------------------------------------------ ATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFWLAETLKYLYILFLDEFDLT --------2--2------------------------------------------------ KVVFNTEAHPFPVLDEEILKSQSLTTGWSL ------------------------------ >PROTEIN-L-ISOASPARTATE O-; SWP:Q56308; PDB:1DL5A; MREKLFWILKKYGVSDHIAKAFLEIPREEFLTKSYPLSYVYEDIVLVSYDDGEEYSTSSQ ------------------------------------------------------------ PSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNV ----------------------------------------------------1------- ERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPINLKLS -----------1------------------------------------------------ RRQPAFLFKKKDPYLVGNYKLETRFITAGGNLGNLLERNRKLLREFPFNREILLVRSHIF ------------------------------------------------------------ VELVDLLTRRLTEIDGTFYYAGPNGVVEFLDDRMRIYGDAPEIENLLTQWESCGYRSFEY ----------------------------------------------------2------- LMLHVGYNAFSHISCSI --------------2-- >Ig heavy chain V region P; SWP:P01820; PDB:1DL7H; QVQLKESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGSTDYN ---------------------1-------------------------------------- SALKSRLNISKDKSKSQVFLRMYSLQTDDTARYYCARDYGPYWGQGTLVTVS ----------------------------------1----------------- >Putative uncharacterized ; SWP:Q0VDX6; PDB:1DL7L; QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTKHRTPGA ---------------------1-------------------------------------- PARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVL -----------------------------1------------------- >LECTIN SCAFET PRECURSOR; SWP:Q9ZP48; PDB:1DLPA; NNILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDSDVRVWASNTAGATGCRA -----------------------------------1---------------------1-- VLQSDGLLVILTAQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYGPGLWDSGTSNKGSVVV ------------------------------------------------------------ ANNGNSILYSTNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDRDDRVWSTNTAGKGTG -------------------------------------2---------------------- CRAVLQPNGRMDVLTNQNIAVWTSGNSRSAGRYVFVLQPDRNLAIYGGALWTT 2---------------------------------------------------- >IGM-KAPPA COLD AGGLUTININ; SWP:Q6GMV9; PDB:1DN0A; EIVLTQSPATLSLSPGERATLSCGASQSVSSNYLAWYQQKPGQAPRLLIYDASSRATGIP ----------------------1------------------------------------- DRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFP ----------------------------1------------------------------- PSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTL --------------2--------------------------------------------- TLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC --------------2-------------------- >IGM-KAPPA COLD AGGLUTININ; SWP:NA; PDB:1DN0B; EVQLQQWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYN ---------------------1-------------------------------------- PSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSS ----------------------------------1------------------------- GSASAPTLFPLVSCTSSVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYA ---------------------2-------------------------------------- ATSQVLLPSKDVTDEHVVCKVQHPNGNKEKNVPLPV ------------------2----------------- >HUMAN COPPER CHAPERONE FO; SWP:O14618; PDB:1DO5A; QNLGAAVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNS ---------------------------------------------------------1-- CGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVWDVIGRSLIIDEG ------------------------------------------------------------ EDDLGRGGHPLSKITGNSGERLACGIIARSAGLF -----------------------1---------- >ADENYLOSUCCINATE LYASE; SWP:Q8ZY28; PDB:1DOFA; HVSPFDWRYGSEEIRRLFTNEAIINAYLEVERALVCALEELGVAERGCCEKVNKASVSAD -----------------------------------1-----------21----------- EVHDILSLVLLLEQKSGCRYVHYGATSNDIIDTAWALLIRRALAAVKEKARAVGDQLASM -----------------2------------------------------------------ ARKYKTLEMVGRTHGQWAEPITLGFKFANYYYELYIACRQLALAEEFIRAKIGGAVGTMA -------------------------------------3---------------------- SWGELGLEVRRRVAERLGLPHHVITTQVAPRESFAVLASALALMAAVFERLAVEIRELSR ------------------------------------------------------------ PEIGEVVEGGANPTASERIVSLARYVRALTHVAFENVALWHERDLTNSANERVWIPEALL ------------------------------------------------------------ ALDEILTSALRVLKNVYIDEERITENLQKALPYILTEFHMNRMIKEGASRAEAYKKAKEV ------------------------------------------------------------ KALTFEYQKWPVERLIEDALSLKLC ------------------------3 >MONOCYTE CHEMOATTRACTANT ; SWP:P13500; PDB:1DOKA; MQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKW -----------12-----------------------1---------------2------- VQDSMDHLDKQT ------------ >ATRIAL NATRIURETIC PEPTID; SWP:P18910; PDB:1DP4A; SDLTVAVVLPLTNTSYPWSWARVGPAVELALARVKARPDLLPGWTVRMVLGSSENAAGVC -----------------------------------------------------------1 SDTAAPLAAVDLKWEHSPAVFLGPGCVYSAAPVGRFTAHWRVPLLTAGAPALGIGVKDEY -------------------------1---------------------------------- ALTTRTGPSHVKLGDFVTALHRRLGWEHQALVLYADRLGDDRPCFFIVEGLYMRVRERLN -------------------------------------------2---------------- ITVNHQEFVEGDPDHYPKLLRAVRRKGRVIYICSSPDAFRNLMLLALNAGLTGEDYVFFH --------------------------------2--------------------------- LDVFGQSLKSAQGLVPQKPWERGDGQDRSARQAFQAAKIITYKEPDNPEYLEFLKQLKLL ------------------------------------------------------------ ADKKFNFTVEDGLKNIIPASFHDGLLLYVQAVTETLAQGGTVTDGENITQRMWNRSFQGV ------------------------------------------------------------ TGYLKIDRNGDRDTDFSLWDMDPETGAFRVVLNYNGTSQELMAVSEHKLYWPLGYPPPDV ------------------------------------------------------------ PKCGF ----- >DIPEPTIDE-BINDING PROTEIN; SWP:P23847; PDB:1DPE; KTLVYCSEGSPEGFNPQLFISGTTYDASSVPLYNRLVEFKIGTTEVIPGLAEKWEVSEDG -----1------------------------------------------------------ KTYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFDRQKNAQNPYHKVSGGSYEYFEGMGL ------------------------------------------------------------ PELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYADAMMKAGTPEKLDLNPI ------------------------------------------------------------ GTGPFQLQQYQKDSRIRYKAFDGYWGTKPQIDTLVFSITPDASVRYAKLQKNECQVMPYP -----------------------------------------------------1------ NPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDVKVRQALTYAVNKDAIIKAVYQ ------------------------------------------------------------ GAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAKALLKEAGLEKGFSIDLWAMPVQRPYNPN ------------------------------------------------------------ ARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRAKDGEHQTVMMGWTGDNGDPDNFFATEF ------------------------------------------------------------ SCAASEQGSNYSKWCYKPFEDLIQPARATDDHNKRVELYKQAQVVMHDQAPALIIAHSTV -2------------2--------------------------------------------- FEPVRKEVKGYVVDPLGKHHFENVSIE --------------------------- >PHOSPHOLIPASE A2; SWP:Q9DF52; PDB:1DPYA; NLIQFKNMIQCAGTRIWTAYVAYGCYCGKGGSGTPVDELDRCCYTHDHCYNEAEKIPGCN ----------1-------------2-3--------------43-----5---------6- PNIKTYSYTCTQPNLTCTDSADTCAQFLCECDRTAAICFASAPYNSNNIMLSSTSCQ ---------1------7------6----7-5------4-----------------2- >TACHYCITIN; SWP:P91818; PDB:1DQCA; YLAFRCGRYSPCLDDGPNVNLYSCCSFYNCHKCLARLENCPKGLHYNAYLKVCDWPSKAG -----1-----2-----------34----2--1------5------------5------- CTSVNKECHLWKT 3------4----- >FAB HGR-2 F6; SWP:NA; PDB:1DQDH; EVQLQESGPSLVKPSQTLSLTCSVTGDSITSGYWNWIRKFPGNKLEYMGYISYSGSTYYN ---------------------1-------------------------------------- PSLKSRLSITRDTSRNQYYLQLKSVTPEDTATYYCASPPGYYGSGPYAMDYWGQGTSVTV ----------------------------------1------------------------- SSAKTTPPSVYPLAPGSAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQS ---------------------------2-------------------------------- DLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKISPG ----------------------2------------------ >EG628498 protein; SWP:A0A5E0; PDB:1DQDL; DIVLSQSPAIMSASPGEKVTITCSASSSVSYMHWFQQKPGTSPKLCIYTTSNLASGVPAR ----------------------1------------------------------------- FSGSGSGTSYSLTISRMEAEDAATYYCQQRSTYPPTFGSGTKLEIKRADAAPTVSIFPPS --------------------------1--------------------------------- SEQLTSGGASVVCFLNNFYPRDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTL ------------2----------------------------------------------- TKDEYERHNSYTCEATHKTSTSPIVKSFNRNECA ------------2--------------------- >PHEROMONE-BINDING PROTEIN; SWP:P34174; PDB:1DQEA; SQEVMKNLSLNFGKALDECKKEMTLTDAINEDFYNFWKEGYEIKNRETGCAIMCLSTKLN ------------------1------------------------------2---1------ MLDPEGNLHHGNAMEFAKKHGADETMAQQLIDIVHGCEKSTPANDDKCIWTLGVATCFKA ------------------------------------3----------2--------3--- EIHKLNWAPSMDVAVGE ----------------- >MANNOSE RECEPTOR; SWP:Q61830; PDB:1DQGA; DARQFLIYNEDHKRCVDALSAISVQTATCNPEAESQKFRWVSDSQIMSVAFKLCLGVPSK --------------1-------------1------------------------2------ TDWASVTLYACDSKSEYQKWECKNDTLFGIKGTELYFNYGNRQEKNIKLYKGSGLWSRWK ----------2----------3-------------------------------------- VYGTTDDLCSRGYE --------3----- >Lysozyme C [Precursor]; SWP:P00698; PDB:1DQJB; EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSDYWSWIRKFPGNKLEYMGYISYSGSTYYH ---------------------1-------------------------------------- PSLKSRISITRDTSKNQYYLQLNSVTTEDTATYYCASWGGDVWGAGTTVTVSSAKTTAPS ----------------------------------1------------------------- VYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSS -------------------2---------------------------------------- VTVTSSTWPSQSITCNVAHPASSTKVDKKI --------------2--------------- >IGM MEZ IMMUNOGLOBULIN; SWP:NA; PDB:1DQLH; VQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVISSDGGNKYYT --------------------1--------------------------------------- DSVKGRFTISRNDSKNTLYLQMNSLRTEDTAVFYCARGNPPYSSGWGGGDYWGQGTMVTV ----------------------------------1------------------------- SS -- >IGKC protein; SWP:Q6GMW1; PDB:1DQLL; DIQMTQSPSSLSASVGDRVTITCRASQDIRNDLGWYQQKPGKAPKKLIYAASSLQSGVPS ----------------------1------------------------------------- RFSGSGSGTDFTLTISSLQPEDFATYYCLQQNSNWTFGQGTKVDIK ---------------------------1------------------ >ANTI-LYSOZYME ANTIBODY HY; SWP:NA; PDB:1DQQB; EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSDYWSWIRKFPGNKLEYMGYISYSGSTYYH ---------------------1-------------------------------------- PSLKSRISITRDTSKNQYYLQLNSVTTEDTATYYCASWGGDVWGAGTTVTVSSAKTTAPS ----------------------------------1------------------------- VYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSS -------------------2---------------------------------------- VTVTSSTWPSQSITCNVAHPASSTKVDKKI --------------2--------------- >CYTOTOXIC T LYMPHOCYTE AS; SWP:P09793; PDB:1DQTA; IQVTQPSVVLASSHGVASFPCEYSPSHNTDEVRVTVLRQTNDQMTEVCATTFTEKNTVGF --------------------1--------------------------2------------ LDYPFCSGTFNESRVNLTIQGLRAVDTGLYLCKVELMYPPPYFVGMGNGTQIYVIDP -----2-------------------------1------------------------- >Metallocarboxypeptidase i; SWP:P81511; PDB:1DTDB; DESFLCYQPDQVCCFICRGAAPLPSEGECNPHPTAPWCREGAVEWVPYSTGQCRTTCIPY -----1------23--4-----------1--------3--------------4---2--- V - >DENDROTOXIN K; SWP:P00981; PDB:1DTK; AAKYCKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCVG ----1--------2---------------3-------2------------3---1-- >ALPHA-DENDROTOXIN; SWP:P00980; PDB:1DTX; PRRKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCIG -----1--------2---------------3-------2------------3---1-- >APO LACTOFERRIN; SWP:Q9TUM0; PDB:1DTZA; ASKKSVRWCTTSPAESKKCAQWQRRMKKVRGPSVTCVKKTSRFECIQAISTEKADAVTLD --------1---------2----------------2--------1--------------- GGLVYDAGLDPYKLRPIAAEVYGTENQPQTHYYAVAIAKKGTNFQLNQLQGLKSCHTGLG ------------------------------------------------------3----- RSAGWNIPMGLLRPFLDWTGPPEPLQKAVAKFFSASCVPCVDGKEYPNLCQLCAGTGENK ------------------------------------4--5---------6--4------- CACSSQEPYFGYSGAFKCLQDGAGDVAFVKDSTVFESLPAKADRDQYELLCPNNTRKPVD 6-5--------------3--------------------------------7--------- AFQECHLARVPSHAVVARSVNGKEDLIWKLLVKAQEKFGRGKPSAFQLFGSPAGQKDLLF ----7------------------------------------------------------- KDSALGLLRIPKKIDSGLYLGSNYITAIRGLRETAAEVELRRAQVVWCAVGSDEQLKCQE -----------------------------------------------8---------9-- WSRQSNQSVVCATASTTEDCIALVLKGEADALSLDGGYIYIAGKCGLVPVLAESQQSPES ----------9--------8------------------------a--------------- SGLDCVHRPVKGYLAVAVVRKANDKITWNSLRGKKSCHTAVDRTAGWNIPMGPLFKDTDS ----b-------------------------------c----------------------- CRFDEFFSQSCAPGSDPRSKLCALCAGNEEGQLKCVPNSSERLYGYTGAFRCLAENVGDV d---------e----------f--e---------f----------------c-------- AFVKDVTVLDNTDGKGTEQWAKDLKLGDFELLCLNGTRKPVTEAESCHLPVAPNHAVVSR --------------------------------g-------------g------------- IDKVAHLRQVLLRQQAHFGRNGEDCPGKFCLFQSKTKNLLFNDNTECLAKLQGKTTYDEY ------------------------h----h----------------b------------- LGPQYVTAIAKLRRCSTSPLLEACAFLMR --------------d--------a----- >DEATH RECEPTOR 5; SWP:Q7Z360; PDB:1DU3A; SSPSEGLCPPGHHISEDGRDCISCKYGQDYSTHWNDLLFCLRCTRCDSGEVELSPCTTTR -------1------------1--2---------------2--3--4---------3---- NTVCQCEEGTFREEDSPEMCRKDCTPWSDI ---4-5-------------5---------- >ZEAMATIN; SWP:P33679; PDB:1DU5A; AVFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGS --------1-----------------------------------------2--------- CRTGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSR 2----3-----3---------------------------------------------4-- GPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDA ---5-------6---------6---7--------78-------8------------5--- YSYPKDDATSTFTCPAGTNYKVVFCP -------------4----------1- >ASIALOGLYCOPROTEIN RECEPT; SWP:P07306; PDB:1DV8A; CPVNWVEHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMG 1----------1----------------2------------------------------- LHDQNGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPY -----------------------------------------3-------------3---- RWVCETEL ---2---- >Ig kappa chain V-V region; SWP:P01644; PDB:1DVFC; DIQLTQSPSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPS ----------------------1------------------------------------- RFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPWTFGGGTKLEIK ---------------------------1------------------- >CYTOCHROME C; SWP:P81238; PDB:1DW0A; GDTSPAQLIAGYEAAAGAPADAERGRALFLSTQTGGKPDTPSCTTCHGADVTRAGQTRTG ------------------------------------------------------------ KEIAPLAPSATPDRFTDSARVEKWLGRNCNSVIGRDCTPGEKADLLAWLAAQ ----------------------------1-------1--------------- >LINUM USITATISSINUM TRYPS; SWP:P82381; PDB:1DWMA; SRRCPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDHG ---1--------------------------------------------1----------- VVTSVPHIT --------- >ACETYLCHOLINESTERASE; SWP:P07140; PDB:1DX4A; DRLVVQTSSGPVRGRSVTVQGREVHVYTGIPYAKPPVEDLRFRKPVPAEPWHGVLDATGL ------------------------------------------------------------ SATCVQERYEYFPGFSGEEIWNPNTNVSEDCLYINVWAPATTNGLPILIWIYGGGFMTGS ---1--------------------------1----------------------------- ATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR ------------------------------------------------------------ WLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMNAPWSHMTS ------------------------------------------------------------ EKAVEIGKALINDCNCNASMLKTNPAHVMSCMRSVDAKTISVQQWNSYSGILSFPSAPTI ---------------2--------------2----------------------------- DGAFLPADPMTLMKTADLKDYDILMGNVRDEGTYFLLYDFIDYFDKDDATALPRDKYLEI ------------------------------------------------------------ MNNIFGKATQAEREAIIFQYTSWEGNPGYQNQQQIGRAVGDHFFTCPTNEYAQALAERGA ---------------------------------------------3-------------- SVHYYYFTHRTSTSLWGEWMGVLHGDEIEYFFGQPLNNSLQYRPVERELGKRMLSAVIEF ------------------------------------------------------------ AKTGNPAQDGEEWPNFSKEDPVYYIFSTDDKIEKLARGPLAARCSFWNDYLPKVRSW -------------------------------------------3------------- >Thrombomodulin [Precursor; SWP:P07204; PDB:1DX5I; VEPVDPCFRANCEYQCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQ ------1----2---1---------2-3-------------3---4----4---5----- ASCECPEGYILDDGFICTDIDECENGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC --5-6-----------6-----7-----8---7--------8-9-------------9 >CLASS II CHITINASE; SWP:O81934; PDB:1DXJA; DVGSVIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAF ----------------------1------------------------------------- LAQTSHETTGGAAGSPDGPYAWGYCFVTERDKSNKYCDPGTPCPAGKSYYGRGPIQLTHN ------------------------1----------------------------------- YNYAQAGRALGVDLINNPDLVARDAVISFKTAIWFWMTPQGNKPSCHDVITNRWTPSAAD ------------------------------------------------------------ VAANRTPGFGVITNIINGGIECGRGPSPASGDRIGFYKRYCDVLHLSYGPNLNCRDQRPF ------------------------------------------------------------ GG -- >DIHYDROLIPOAMIDE DEHYDROG; SWP:P31023; PDB:1DXLA; SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMY -----------------------------------------1----1------------- HEAKHSFANHGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSP ------------------------------------------------------------ SEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKIVSSTGALALSEIPKKLVVI ------------------------------------------------------------ GAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVG ------------------------------------------------------------ VDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNE ------------------------------------------------------------ RFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGKVGHVDYDKVPGVVYTNPEVAS ------------------------------------------------------------ VGKTEEQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAG ------------------------------------------------------------ ELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKEAAMATYDKPIHI ----------------------------------------------- >COLLAGEN ALPHA1(XVIII) CH; SWP:P39061; PDB:1DY0A; AHTHQDFQPVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYS ---------------------------------1-------------------------- IVRRADRGSVPIVNLKDEVLSPSWDSLFSGSQGQLQPGARIFSFDGRDVLRHPAWPQKSV ------------------------------------------------------------ WHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGRLLEQKAASCHNSYIVLCIENSFM ---------------2-----------------------------2-------1------ >COLLAGEN ALPHA1(XV) CHAIN; SWP:O35206; PDB:1DY2A; RPVLHLVALNTPVAGDIRADFQCFQQARAAGLLSTFRAFLSSHLQDLSTVVRKAERFGLP ----------------------1------------------------------------- IVNLKGQVLFNNWDSIFSGDGGQFNTHIPIYSFDGRDVMTDPSWPQKVVWHGSNPHGVRL ------------------------------------------------------------ VDKYCEAWRTTDMAVTGFASPLSTGKILDQKAYSCANRLIVLCIENSF ----2-----------------------------2-------1----- >RIBONUCLEASE A; SWP:P00656; PDB:1DY5A; KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQ -------------------------1-------------2-----------------3-- KNVACKGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFD ----4-----4-----------1----------2--------------3----------- ASV --- >LAMININ ALPHA 2 CHAIN; SWP:Q60675; PDB:1DYKA; HGPCVAESEPALLTGSKQFGLSRNSHIAIAFDDTKVKNRLTIELEVRTEAESGLLFYMAR ---1-------------------------------------------------------- INHADFATVQLRNGFPYFSYDLGSGDTSTMIPTKINDGQWHKIKIVRVKQEGILYVDDAS ------------------------------------------------------------ SQTISPKKADILDVVGILYVGGLPINYTTRRIGPVTYSLDGCVRNLHMEQAPVDLDQPTS -----------------------------------------2------------------ SFHVGTCFANAESGTYFDGTGFAKAVGGFKVGLDLLVEFEFRTTRPTGVLLGVSSQKMDG ------2----------------------------------------------------- MGIEMIDEKLMFHVDNGAGRFTAIYDAEIPGHMCNGQWHKVTAKKIKNRLELVVDGNQVD ---------------------------------1-------------------------- AQSPNSASTSADTNDPVFVGGFPGGLNQFGLTTNIRFRGCIRSLKLTKGTGKPLEVNFAK ---------------------------------------3-------------------- ALELRGVQPVSCPT -----------3-- >KAPPA-CARRAGEENASE; SWP:P43478; PDB:1DYPA; SQPPIAKPGETWILQAKRSDEFNVKDATKWNFQTENYGVWSWKNENATVSKGKLKLTTKR ------------------------------------------------------------ ESHQRTFWDGCNQQQVANYPLYYTSGVAKSRATGNYGYYEARIKGASTFPGVSPAFWYST ----------1------------------------------------------------- IDRSLTKEGDVQYSEIDVVELTQKSAVRESDHDLHNIVVKNGKPTWRPGSFPQTNHNGYH ------------------------------------------------------------ LPFDPRNDFHTYGVNVTKDKITWYVDGEIVGEKDNLYWHRQNLTLSQGLRAPHTQWKCNQ ---------------------------------------------------------1-- FYPSANKSAEGFPTSEVDYVRTWVKV -------------------------- >STAPHYLOCOCCAL ENTEROTOXI; SWP:P13163; PDB:1DYQA; EINEKDLRKKSELQGTALGNLKQIYYYNEKAKTENKESHDQFRQHTILFKGFFTDHSWYN ------------------------------------------------------------ DLLVRFDSKDIVDKYKGKKVDLYGAYAGYQCAGGTPNKTACMYGGVTLHDNNRLTEEKKV ------------------------------1---------1------------------- PINLWLDGKQNTVPLETVKTNKKNVTVQELDLQARRYLQEKYNLYNSDVFDGKVQRGLIV ------------------------------------------------------------ FHTSTEPSVNYDLFGAQGQYSNTLLRIYRDNKTINSENMHIDIYLYTS ------------------------------------------------ >ENDOGLUCANASE; SWP:Q7SIG5; PDB:1DYSA; GNPFSGRTLLVNSDYSSKLDQTRQAFLSRGDQTNAAKVKYVQEKVGTFYWISNIFLLRDI ------------------------------------------------------------ DVAIQNARAAKARGENPIVGLVLYNLPDRDCSAGESSGELKLSQNGLNRYKNEYVNPFAQ ------------------------------1----------------------------- KLKAASDVQFAVILEPDAIGNMVTGTSAFCRNARGPQQEAIGYAISQLQASHIHLYLDVA -----------------------------1------------------------------ NGGWLGWADKLEPTAQEVATILQKAGNNAKIRGFSSNVSNYNPYSTSNPPPYTSGSPSPD ------------------------------------------------------------ ESRYATNIANAMRQRGLPTQFIIDQSRVALSGARSEWGQWCNVNPAGFGQPFTTNTNNPN ----------------------------------------2------------------- VDAIVWVKPGGESDGQCGMGGAPAAGMWFDAYAQMLTQNAHDEIA ----------------2---------------------------- >EOSINOPHIL CATIONIC PROTE; SWP:P12724; PDB:1DYTA; RPPQFTRAQWFAIQHISLNPPRCTIAMRAINNYRWRCKNQNTFLRTTFANVVNVCGNQSI ----------------------1-------------2-----------------3----- RCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNISNCRYADRPGRRFYVVACDNRDPRDSP -4--------4-----------1------------2--------------3--------- RYPVVPVHLDTTI ------------- >CHORIONIC GONADOTROPIN; SWP:P01215; PDB:1DZ7A; APDVQDCPECTLQENPFFSQPGAPILQCMGCCFSRAYPTPLRSKKTMLVQKNVTSESTCC ------1--2-----------------3--14--------------------------52 VAKSYNRVTVMGGFKVENHTACHCSTCYYHKS ---------------------3-4--5----- >RIBONUCLEASE 1; SWP:Q16869; PDB:1DZAA; KESAAAKFERQHMDSGNSTYCNQMMRRRNMTQGRCKPVNTFVHESLVDVQNVCFQEKVTC --------------------1-------------2-----------------3------4 KNGQGNCYKSNSSMHITDCRLTNGSRYPNCAYRTSPKERHIIVACEGSPYVPVHFDASVE ------4-----------1----------2--------------3--------------- >SCFV FRAGMENT 1F9; SWP:P00703; PDB:1DZBA; QVKLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKY ---------------------1-------------------------------------- DPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARWDWYFDVWGQGTTVTVSSGDIE -----------------------------------1------------------------ LTQSPSSMYTSLGERVTITCKASQDINSYLRWFQQKPGKSPKTLIYYATSLADGVPSRFS ------------------------------------------------------------ GSGSGQDYSLTISSLESDDTTTYYCLQHGESPYTFGGGTKLEIK -------------------------------------------- >ODORANT-BINDING PROTEIN; SWP:P81245; PDB:1DZKA; FELSGKWITSYIGSSDLEKIGENAPFQVFMRSIEFDDKESKVYLNFFSKENGICEEFSLI -----------------------------------------------------1------ GTKQEGNTYDVNYAGNNKFVVSYASETALIISNINVDEEGDKTIMTGLLGKGTDIEDQDL ------------------------------------------------------------ EKFKEVTRENGIPEENIVNIIERDDCPA -------------------------1-- >RIBONUCLEASE 1; SWP:P07998; PDB:1E21A; AFQRQHMDSDSSPSSSSTYCNQMMRRRNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCK -------------------1-------------2-----------------3------4- NGQGNCYKSNSSMHITDCRLTNGSRYPNCAYRTSPKERHIIVACEGSPYVPVHFDASVE -----4-----------1----------2--------------3--------------- >HLA CLASS I HISTOCOMPATIB; SWP:P18464; PDB:1E27A; GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYW ------------------------------------------------------------ DRNTQIFKTNTQTYRENLRIALRYYNQSEAGSHTWQTMYGCDVGPDGRLLRGHNQYAYDG ----------------------------------------1------------------- KDYIALNEDLSSWTAADTAAQITQRKWEAAREAEQLRAYLEGLCVEWLRRHLENGKETLQ -------------------------------------------1---------------- RADPPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRT ----------------------2------------------------------------- FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP ------------------2----------------- >[NIFE] HYDROGENASE SMALL ; SWP:AAF43138; PDB:1E3DB; TPRSNYTGPIVVDPLTRIEGHLRIEVEVEGGVIKEARSCATLFRGIETILKGRDPRDAQH ------------------------------------------------------------ FTQRTCGVCTYTHALASTRCLEDAINKPIPANATYIRNLVLGNQFMHDHLVHFYHLHALD -----1--2--------------------------------------------------- FVDVTSALLADPAKAAKLANSISPRKATTEEFAAVQAKLKTFVASGQLGPFTNAYFLGGH ------------------------------------------------------------ EGYYMDPEANLVCTAHYLQALRAQVEVAKGMAVFGAKNPHTQFTVAGGVTCYEALTPERI ------------------------------------------------------------ KQFRELYVKARAFIEEVYIPDLLLVASYYKDWGKIGGTNNFMAFGEFPAPGGERDLNSRW ------------------------------------------------------------ YKPGVIYDRKVGSVQPFDPSKIEEHVRHSWYEGKARAPFEGETNPHFTFMGDTDKYSWNK ------------------------------------------------------------ APRYDGHAVETGPLAQMLVAYGHNHKTIKPTIDAVLGKLNLGPEALFSTLGRTAARGIQT ------------------------------------------------------------ LVIAQQMENWLNEYENNIVKDKQIVEDYAVPTSARGVGFADVSRGGLSHWMTIEDGKIDN ------------------------------------------------------------ FQLVVPTTWNLGPRDDKGVPSAAEAALVGTPVADPKRPVEILRTIHSFDPCIACSTH --------------------------------------------------1--2--- >VANCOMYCIN/TEICOPLANIN A-; SWP:P25051; PDB:1E4EA; NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGITKSGVWKMCEKPCAEWEN --------------------------------------------------1--------- ENCYSAVLSPDKKMHGLLVKKNHEYEINHVDVAFSALHGKSGEDGSIQGLFELSGIPFVG --1--------------------------------------------------------- CDIQSSAICMDKSLTYIVAKNAGIATPAFWVINKDDRPVAATFTYPVFVKPARSGSSFGV ------------------------------------------------------------ KKVNSADELDYAIESARQYDSKILIEQAVSGCEVGCAVLGNSAALVVGEVDQIRLQYGIF ------------------------------------------------------------ RIHQEVEPEKGSENAVITVPADLSAEERGRIQETVKKIYKTLGCRGLARVDMFLQDNGRI ------------------------------------------------------------ VLNEVNTLPGFTSYSRYPRMMAAAGISLPELIDRLIVLALK ----------------------------------------- >Myrosinase MA1; SWP:P29736; PDB:1E4MM; EITCQENLPFTCGNTDALNSSSFSSDFIFGVASSAYQIEGTIGRGLNIWDGFTHRYPNKS -----------1------------------------------------------------ GPDHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYH ------------------------------------------------------------ GLISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYW ------------------------------------------------------------ LTINQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYR -----------------------2-------2---------------------------- KNYTHQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDT ------------------------------------------------------------ VGERLPSFSPEESNLVKGSYDFLGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINA ------------------------------------------------------------ SGHYIGPLFEKDKADSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQ ------------------------------------------------------------ SMLDYTRIDYLCSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNN -----------1------------------------------------------------ VTDRDLKKSGQWYQSFISP ------------------- >BETA-DEFENSIN 8; SWP:CAC44635; PDB:1E4RA; NEPVSCIRNGGICQYRCIGLRHKIGTCGSPFKCCK -----1------2---3---------2-----13- >BETA-DEFENSIN 1; SWP:Q09753; PDB:1E4SA; DHYNCVSSGGQCLYSACPIFTKIQGTCYRGKAKCCK ----1------2----3---------2------13- >BETA-DEFENSIN 7; SWP:CAC44542; PDB:1E4TA; NSKRACYREGGECLQRCIGLFHKIGTCNFRFKCCKFQ -----1------2---3---------2-----13--- >TAB2; SWP:NA; PDB:1E4XL; DIQMTQTPSSLSASLGDRVTISCRASQDISHYLNWFQQKPDGTVKLLIYYTSTLHSGVPS ----------------------1------------------------------------- RFSGSGSGTDYSLTISNLEEEDIAFYFCQQGGALPFTFGSGTKLAIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLDSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >XYLANASE D; SWP:P54865; PDB:1E5BA; TGCSVTATRAEEWSDGFNVTYSVSGSSAWTVNLALNGSQTIQASWNANVTGSGSTRTVTP --1--------------------------------------------------------- NGSGNTFGVTVMKNGSSTTPAATCAGS -----------------------1--- >APHRODISIN; SWP:P09465; PDB:1E5PA; FAELQGKWYTIVIAADNLEKIEEGGPLRFYFRHIDCYKNCSEEITFYVITNNQCSKTTVI -----------------------------------1---1-------------2------ GYLKGNGTYETQFEGNNIFQPLYITSDKIFFTNKNDRAGQETNIVVAGKGNALTPEENEI ------------------------------------------------------------ LVQFAHEKKIPVENILNILATDTCPE -----------------------2-- >EG628498 protein; SWP:A0A5E0; PDB:1E6OH; EVQLQQSGAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPSSGYSNY ---------------------1-------------------------------------- NQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCSRPVVRLGYNFDYWGQGSTLTVSS -----------------------------------1------------------------ AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSD --------------------------2--------------------------------- LYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP ---------------------2----------------- >EARLY ACTIVATION ANTIGEN ; SWP:Q07108; PDB:1E87A; SSCSEDWVGYQRKCYFISTVKRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREEHW --1----------1----------------2----------------------------- VGLKKEPGHPWKWSNGKEFNNWFNVTGSDKCVFLKNTEVSSMECEKNLYWICNKPYK ------------------------------3------------3-------2----- >FIBRONECTIN; SWP:P02751; PDB:1E88A; YGHCVTDSGVVYSVGMQWLKTQGNKQMLCTCLGNGVSCQETAVTQTYGGNSNGEPCVLPF ---1------------------------2-1------2-----------------3---- TYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGNSNGALCHFPF ---------4-----------3--------------4------------------5---- LYNNHNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMA ---------6-----------5--------------6--- >ENDOGLUCANASE; SWP:CAB92325; PDB:1E8PA; ASCWAQSQGYNCCNNPSSTKVEYTDASGQWGVQNGQWCGIDYSYGQ --1--------12------------------------2-------- >ENDO-1,4-BETA-XYLANASE; SWP:P14768; PDB:1E8RA; MGNQQCNWYGTLYPLCVTTTNGWGWEDQRSCIARSTCAAQPAPFGIVGSG -----1---------2--------------2-----1------------- >ACETYLCHOLINESTERASE; SWP:P04058; PDB:1EA5A; SELLVNTKSGKVMGTRVPVLSSHISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTY ------------------------------------------------------------ PNNCQQYVDEQFPGFSGSEMWNPNREMSEDCLYLNIWVPSPRPKSTTVMVWIYGGGFYSG ---1--------------------------1----------------------------- SSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDN ------------------------------------------------------------ IQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPNCPWASVSVAEGRR ------------------------------------------------------------ RAVELGRNLNCNLNSDEELIHCLREKKPQELIDVEWNVLPFDSIFRFSFVPVIDGEFFPT ----------2----------2-------------------------------------- SLESMLNSGNFKKTQILLGVNKDEGSFFLLYGAPGFSKDSESKISREDFMSGVKLSVPHA ------------------------------------------------------------ NDLGLDAVTLQYTDWMDDNNGIKNRDGLDDIVGDHNVICPLMHFVNKYTKFGNGTYLYFF --------------------------------------3--------------------- NHRASNLVWPEWMGVIHGYEIEFVFGLPLVKELNYTAEEEALSRRIMHYWATFAKTGNPN ------------------------------------------------------------ EPHSQESKWPLFTTKEQKFIDLNTEPMKVHQRLRVQMCVFWNQFLPKLLNAT -------------------------------------3-------------- >SERINE PROTEASE; SWP:Q9S3L6; PDB:1EA7A; RASQQIPWGIKAIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNNVEQCKDFTGATTP --------------------------------------------------1--------- INNSCTDRNGHGTHVAGTALADGGSDQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAI ----1------------------------------------------------------- RHAADQATATGTKTIISMSLGSSANNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYP ------------------------------------------------------------ GALPNAIAVAALENVQQNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYN ------------------------------------------------------------ GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGYGAAIGDDY ------------------------------------------------------------ ASGFGFARVQ ---------- >ASPARTIC PROTEINASE (SAP2; SWP:P43097; PDB:1EAGA; QAVPVTLHNEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCK ----------------------------------------------1-----------1- QKGTYDPSGSSASQDLNTPFKIGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTSID ------------------------------------------------------------ QGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYS ------------------------------------------------------------ GSLIALPVTSDRELRISLGSVEVSGKTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNG ------------------------------------------------------------ KLTQDSNGNSFYEVDCNLSGDVVFNFSKNAKISVPASEFAASLDGQPYDKCQLLFDVNDA ---------------2----------------------------------2--------- NILGDNFLRSAYIVYDLDDNEISLAQVKYTSASSISALT --------------------------------------- >Chymotrypsin/elastase iso; SWP:P07851; PDB:1EAIC; GQESCGPNEVWTECTGCEMKCGPDENTPCPLMCRRPSCECSPGRGMRRTNDGKCIPASQC ----1--------2--3---4-------3---2----1-5-------------5-----4 P - >COXSACKIE VIRUS AND ADENO; SWP:P78310; PDB:1EAJA; FARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYS -------------------------1---------------------------------- GDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHL --------------------------------------------1--------------- VVLV ---- >72 KDA TYPE IV COLLAGENAS; SWP:P08253; PDB:1EAKA; SPIIKFPGDVAPKTDKELAVQYLNTFYGCPKESCNLFVLKDTLKKMQKFFGLPQTGDLDQ ----------------------------1----1-------------------------- NTIETMRKPRCGNPDVANYNFFPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARAFQVW ------------------------------------------------------------ SDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDE ------------------------------------------------------------ LWTLGEGQVVRVKYGNADGEYCKFPFLFNGKEYNSCTDTGRSDGFLWCSTTYNFEKDGKY ---------------------2-------------3-----------2------------ GFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDYDRDKKYGF --3----------------4-------------5-----------4-------------- CPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCP 5----------------6-------------7-----------6--------------7- DQGYSLFLVAAHQFGHAMGLEHSQDPGALMAPIYTYTKNFRLSQDDIKGIQELYGASPDI ------------------------------------------------------------ D - >IGG2B-KAPPA 17E8 FAB (HEA; SWP:NA; PDB:1EAPB; EVQLQESGTELVKPGASVKISCKASGYISTDHAIHWVKQRPEQGLEWIGYISPGNGDIKY ---------------------1-------------------------------------- NEKFKVKATLTADQSSSTAYMQLNSLTSEDSAVYFCKRSYYGSSYVDYWGQGTTLTVSSA -----------------------------------1------------------------ KTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGGLSSSVHTFPALLQSGL -------------------------2---------------------------------- YTMSSSVTVPGGGWPSATVTCSVAHPASSTTVDKKL --------------------2--------------- >SUPPRESSOR OF TUMORIGENIC; SWP:Q9Y5Y6; PDB:1EAWA; VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRFRYSD --------------------------1---------------1---------- >NEUTRAL PROTEASE II; SWP:P46076; PDB:1EB6A; TEVTDCKGDAESSLTTALSNAAKLANQAAEAAESGDESKFEEYFKTTDQQTRTTVAERLR -----1------------------------------------------------------ AVAKEAGSTSGGSTTYHCNDPYGYCEPNVLAYTLPSKNEIANCDIYYSELPPLAQKCHAQ -----------------1------2-----------------2-------------3--- DQATTTLHEFTHAPGVYQPGTEDLGYGYDAATQLSAQDALNNADSYALYANAIELKC --------------------------------------------------------3 >DIHYDROLIPOAMIDE DEHYDROG; SWP:P11959; PDB:1EBDA; AIETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYE ----------------------------------------1----1-------------- QAKHSEEMGIKAENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANT ------------------------------------------------------------ VRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFSNRILDSTGALNLGEVPKSLVVIGGGY ------------------------------------------------------------ IGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEER ------------------------------------------------------------ EDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSV ------------------------------------------------------------ PNIFAIGDIVPGPALAHKASYEGKVAAEAIAGHPSAVDYVAIPAVVFSDPECASVGYFEQ ------------------------------------------------------------ QAKDEGIDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAEL ------------------------------------------------------------ GLAIEAGMTAEDIALTIHAHPTLGEIAMEAAEVAL ----------------------------------- >ENDOCELLULASE E1; SWP:P54583; PDB:1ECEA; AGGGYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNT ---------------------------------1-------------------------- IRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDC -----------------------------------------------------------1 SGQSALWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRL -----------------------------------------------2--2--------- AAERAGNAVLSVNPNLLIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDY ------------------------------------------------------------ ATSVYPQTWFSDPTFPNNMPGIWNKNWGYLFNQNIAPVWLGEFGTTLQSTTDQTWLKTLV ------------------------------------------------------------ QYLRPTAQYGADSFQWTFWSWNPDSGDTGGILKDDWQTVDTVKDGYLAPIKSSIFDPV ---------------------------------------------------------- >ECTATOMIN; SWP:P49343; PDB:1ECIA; GVIPKKIWETVCPTVEPWAKKCSGDIATYIKRECGKL -----------1---------------------1--- >Ectatomin subunit B; SWP:P49344; PDB:1ECIB; WSTIVKLTICPTLKSMAKKCEGSIATMIKKKCDK ---------1---------------------1-- >Beta-2-microglobulin [Pre; SWP:P07151; PDB:1ED3B; IQKTPQIQVYSRHPPENGKPNFLNCYVSQFHPPQIEIELLKNGKKIPNIEMSDLSFSKDW ------------------------1----------------------------------- SFYILAHTEFTPTETDVYACRVKHVTLKEPKTVTWDRDM -------------------1------------------- >CHITINASE A; SWP:O83008; PDB:1EDQA; AAPGKPTIAWGNTKFAIVEVDQAATAYNNLVKVKNAADVSVSWNLWNGDTGTTAKVLLNG ------------------------------------------------------------ KEAWSGPSTGSSGTANFKVNKGGRYQMQVALCNADGCTASDATEIVVADTDGSHLAPLKE -------------------------------1----1----------------------- PLLEKNKPYKQNSGKVVGSYFVEWGVYGRNFTVDKIPAQNLTHLLYGFIPICGGNGINDS ---------------------------------------------------2-------- LKEIEGSFQALQRSCQGREDFKVSIHDPFAALQKAQKGVTAWDDPYKGNFGQLMALKQAH --------------2--------------------------------------------- PDLKILPSIGGWTLSDPFFFMGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGAN ------------------------------------------------------------ PNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAGKDKIDKVAYNVAQNSMD ------------------------------------------------------------ HIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNGVNALLAQGVKPGKIVVGTAM ------------------------------------------------------------ YGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIAGQFMSGEWQYTYDATAEAPY ------------------------------------------------------------ VFKPSTGDLITFDDARSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLGNSAGVQ ------------------------------------------------------------ >PECTATE LYASE; SWP:Q9RHW0; PDB:1EE6A; APTVVHETIRVPAGQTFDGKGQTYVANPNTLGDGSQAENQKPIFRLEAGASLKNVVIGAP ------------------------------------------------------------ AADGVHCYGDCTITNVIWEDVGEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIR ------1---1------------------------------------------------- NFRADDIGKLVRQNGGTTYKVVMNVENCNISRVKDAILRTDSSTSTGRIVNTRYSNVPTL ------------------------------------------------------------ FKGFKSGNTTASGNTQY ----------------- >THIOL:DISULFIDE INTERCHAN; SWP:P21892; PDB:1EEJA; DDAAIQQTLAKMGIKSSDIQPAPVAGMKTVLTNSGVLYITDDGKHIIQGPMYDVSGTAPV ------------------------------------------------------------ NVTNKMLLKQLNALEKEMIVYKAPQEKHVITVFTDITCGYCHKLHEQMADYNALGITVRY -------------------------------------1--1------------------- LAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPASCDVDIADHYALGVQLGVS --------------------2---------------------2----------------- GTPAVVLSNGTLVPGYQPPKEMKEFLDEHQKMTSGK ------------------------------------ >ERYTHROPOIETIN; SWP:P01588; PDB:1EERA; APPRLICDSRVLERYLLEAKEAEKITTGCAEHCSLNEKITVPDTKVNFYAWKRMEVGQQA ------1---------------------2---2--------------------------- VEVWQGLALLSEAVLRGQALLVKSSQPWEPLQLHVDKAVSGLRSLTTLLRALGAQKEAIS ------------------------------------------------------------ NSDAASAAPLRTITADTFRKLFRVYSNFLRGKLKLYTGEACRTGDR ----------------------------------------1----- >Erythropoietin receptor [; SWP:P19235; PDB:1EERB; DPKFESKAALLAARGPEELLCFTERLEDLVCFWEEAASAGVGPGQYSFSYQLEDEPWKLC --------------------1---------1----------------------------2 RLHQAPTARGAVRFWCSLPTADTSSFVPLELRVTAASGAPRYHRVIHINEVVLLDAPVGL ---------------2-------------------------------------------- VARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEILEGRTECVLSNLR ------------------------------------------------------------ GRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLT --------------------------------- >MINI-PROINSULIN; SWP:P30410; PDB:1EFEA; FVNQHLCGSHLVEALYLVCGERGFFYTPKTRRYPGDVKRGIVEQCCTSICSLYQLENYCN ------1-----------2-------------------------31---3--------2- >HLA-CW3 (HEAVY CHAIN); SWP:NA; PDB:1EFXA; GSHSMRYFYTAVSRPGRGEPHFIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYW ------------------------------------------------------------ DRETQKYKRQAQTDRVSLRNLRGYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQYAYDG ----------------------------------------1------------------- KDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLKNGKETLQ -------------------------------------------1---------------- RAEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGT ----------------------2------------------------------------- FQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRWEPSS ------------------2------------------- >ENDOGLUCANASE I; SWP:P07981; PDB:1EG1A; QPGTSTPEVHPKLTTYKCTKSGGCVAQDTSVVLDWNYRWMHDANYNSCTVNGGVNTTLCP -----------------1-----1-----------------------2----------3- DEATCGKNCFIEGVDYAASGVTTSGSSLTMNQYMPSSSGGYSSVSPRLYLLDSDGEYVML ----3---2--------------------------------------------------- KLNGQELSFDVDLSALPCGENGSLYLSQMDENGGANQYNTAGANYGSGYCDAQCPVQTWR -----------------4-------------------------------5---6------ NGTLNTSHQGFCCNEMDILEGNSRANALTPHSCTATACDSAGCGFNPYGSGYKSYYGPGD -----------65-------------------7----7----8----------------- TVDTSKTFTIITQFNTDNGSPSGNLVSITRKYQQNGVDIPSAQPGGDTISSCPSASAYGG ---------------------------------------------------8-------- LATMGKALSSGMVLVFSIWNDNSQYMNWLDSGNAGPCSSTEGNPSNILANNPNTHVVFSN ------------------------------------4----------------------- IRWGDIGSTT ---------- >MACROPHAGE MANNOSE RECEPT; SWP:P22897; PDB:1EGIA; CPEDWGASSSLCFKLYAKGKHEKKTWFESRDFCRALGGDLASINNKEEQQTIWRLITASG 1----------1--------------------2--------------------------- SYHKLFWLGLTYGGFTWSDGSPVSYENWAYGEPNNYQNVEYCGELKGDPTMSWNDINCEH -----------------------------------------3---------------3-- LNNWICQIQ -----2--- >GLUTAREDOXIN; SWP:P68688; PDB:1EGO; MQTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVP ----------1--1---------------------------------------------- QIFVDQQHIGGYTDFAAWVKENLDA ------------------------- >GLYCOSYLTREHALOSE TREHALO; SWP:Q55088; PDB:1EH9A; TFAYKIDGNEVIFTLWAPYQKSVKLKVLEKGLYEMERDEKGYFTITLNNVKVRDRYKYVL ------------------------------------------------------------ DDASEIPDPASRYQPEGVHGPSQIIQESKEFNNETFLKKEDLIIYEIHVGTFTPEGTFEG ------------------------------------------------------------ VIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKK ------------------------------------------------------------ GLGVILDVVYNHVGPEGNYMVKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYW ------------------------------------------------------------ IKEYNVDGFRLDAVHAIIDTSPKHILEEIADVVHKYNRIVIAESDLNDPRVVNPKEKCGY ---------------------------------------------------------1-- NIDAQWVDDFHHSIHAYLTGERQGYYTDFGNLDDIVKSYKDVFVYDGKYSNFRRKTHGEP ------------------------------------------------------------ VGELDGCNFVVYIQNHDQVGNRGKGERIIKLVDRESYKIAAALYLLSPYIPMIFMGEEYG ------2----------------------------------------------------- EENPFYFFSDFSDSKLIQGVREGRKKENGQDTDPQDESTFNASKLSWKIDEEIFSFYKIL ------------------------------------------------------------ IKMRKELSIACDRRVNVVNGENWLIIKGREYFSLYVFSKSSIEVKYSGTLLLSSNNSFPQ ----------2------------------------------------------------- HIEEGKYEFDKGFALYK ----------------- >HEAT-STABLE ENTEROTOXIN B; SWP:P22542; PDB:1EHS; STQSNKKDLCEHYRQIAKESCKKGFLGVRDGTAGACFGAQIMVAAKGC ---------1----------2--------------2-----------1 >P8MTCP1; SWP:P56277; PDB:1EI0A; DPCQKQAAEIQKCLQANSYLESKCQAVIQELKKCAAQY --1---------2----------2---------1---- >PALMITOYL PROTEIN THIOEST; SWP:P45478; PDB:1EI9A; DPPAPLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLN -----------------11----------------------------------------- VNSQVTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQGVF --------2-------------------------------2------------------- GLPRCPGESSHICDFIRKTLNAGAYNKAIQERLVQAEYWHDPIREDIYRNHSIFLADINQ ----3-------3----------------------------------------------- ERGVNESYKKNLMALKKFVMVKFLNDTIVDPVDSEWFGFYRSGQAKETIPLQESTLYTQD ------------------------------------------------------------ RLGLKAMDKAGQLVFLALEGDHLQLSEEWFYAHIIPFLE --------------------------------------- >EIAV CAPSID PROTEIN P26; SWP:P69732; PDB:1EIA; TPRGYTTWVNTIQTNGLLNEASQNLFGILSVDCTSEEMNAFLDVVPGQAGQKQILLDAID ------------------------------------------------------------ KIADDWDNRHPLPNAPLVAPPQGPIPMTARFIRGLGVPRERQMEPAFDQFRQTYRQWIIE ------------------------------------------------------------ AMSEGIKVMIGKPKAQNIRQGAKEPYPEFVDRLLSQIKSEGHPQEISKFLTDTLTIQNAN ------------------------------------------------------------ EECRNAMRHLRPEDTLEEKMYACRDIG --1-------------------1---- >EOTAXIN-2; SWP:O00175; PDB:1EIGA; VVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQSCGDPKQEWVQRYM ------12-----------------------1---------------2------------ KNLDAKQKKASPR ------------- >MU-AGATOXIN-I; SWP:P11057; PDB:1EIT; ECVPENGHCRDWYDECCEGFYCSCRQPPKCICRNNN -1------2------31----2-4-----4-3---- >Bdellastasin; SWP:P82107; PDB:1EJAB; TTPCGPVTCSGAQMCEVDKCVCSDLHCKVKCEHGFKKDDNGCEYACICADAPQ ---1----2-----1----2-3----4---5----------3---4-5----- >CRAMBIN (PRO22,SER22/LEU2; SWP:P01542; PDB:1EJGA; TTCCPSIVARSNFNVCRLPGTPEALCATYTGCIIIPGATCPGDYAN --12-----------3---------3-----2-------1------ >Pancreatic trypsin inhibi; SWP:P00974; PDB:1EJMB; RPDFCLEPPYTGPCRLRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA ----1--------2---------------3-------2------------3---1--- >Igk-V21-4 protein; SWP:A0A5E6; PDB:1EJOL; DIVLTQSPASLAVSLGQRATISCRASESVDSYGNSFMHWYQQKPGQPPKLLIYRASNLES ----------------------1------------------------------------- GIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSNEDPLTFGAGTKLELKRADAAPTVS -------------------------------1---------------------------- IFPPSSEQLTSGGASVVCFLNNFYPKDINVRWKIDGSERQNGVLNSWTDQDSKDSTYSMS -----------------2------------------------------------------ STLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRA -----------------2------------------ >Enteropeptidase [Precurso; SWP:P98072; PDB:1EKBB; IVGGSDSREGAWPWVVALYFDDQQVCGASLVSRDWLVSAAHCVYRNME -------------------------1---------------1------ >COMPLEMENT C1S COMPONENT; SWP:P09871; PDB:1ELVA; LDCGIPESIENGKVEDPESTLFGSVIRYTCEEPYYYMEGGGEYHCAGNGSWVNEVLGPEL --1--------------------------2--------------1--------------- PKCVPVCGVPREPFIIGGSDADIKNFPWQVFFDNPWAGGALINEYWVLTAAHVVEGNREP --2--------------------------------------------------------- TMYVGSTSVQKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICL ------------------------------------------------------------ PGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKEVAYVFTPNMICAG ------------------------------------------------------------ GEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGTYGLYTRVKNYVDWIMKTMQ -------3------------------------------3--------------------- ENS --- >FIBRILLIN; SWP:P35555; PDB:1EMN; SAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKN -------1-----2----1--------2-3----------3-----4-----5----4-- VIGGFECTCEEGFEPGPMMTCE ------5-6-----------6- >IGG ANTIBODY (LIGHT CHAIN; SWP:NA; PDB:1EMTH; QVHLQESGPELVRPGASVKISCKTSGYVFSSSWMNWVKQRPGQGLKWIGRIYPGNGNTNY ---------------------1-------------------------------------- NEKFKGKATLTADKSSNTAYMQLSSLTSVDSAVYFCATSSAYWGQGTLLTVSAAKTTPPS -----------------------------------1------------------------ VYPLAPGNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPS --------------2--------------------------------------------- SPRPSETVTCNVAHPASSTKVDKKIVPR ---------2------------------ >AGGLUTININ ISOLECTIN I/AG; SWP:P11218; PDB:1EN2A; RCGSQGGGGTCPALWCCSIWGWCGDSEPYCGRTCENKCWSGERSDHRCGAAVGNPPCGQD -1--------2----31-----2------3---4---4---------5--------6--- RCCSVHGWCGGGNDYCSGSKCQYRC -75-----6------7----8---8 >ENTEROTOXIN H; SWP:P0A0M0; PDB:1ENFA; DLHDKSELTDLALANAYGQYNHPFIKENIKSDEISGEKDLIFRNQGDSGNDLRVKFATAD ------------------------------------------------------------ LAQKFKNKNVDIYGASFYYKCEKISENISECLYGGTTLNSEKLAQERVIGANVWVDGIQK --------------------1---------1----------------------------- ETELIRTNKKNVTLQELDIKIRKILSDKYKIYYKDSEISKGLIEFDMKTPRDYSFDIYDL ------------------------------------------------------------ KGENDYEIDKIYEDNKTLKSDDISHIDVNLYT -------------------------------- >Hemagglutinin [Precursor]; SWP:P03437; PDB:1EO8B; GLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTN ------------------------------------------------------------ EKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFE ------------------------------------------------------------ KTRRQLRENAEEMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQIKG -----------------------1---1--------------------------- >EOTAXIN; SWP:P51671; PDB:1EOT; GPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQD --------12-----------------------1---------------2---------- SMKYLD ------ >THIOREDOXIN CH1, H-TYPE; SWP:P80028; PDB:1EP7A; GGSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFL -----------------------------------1--1--------------------- KVDVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLKALVAKHAAA ---------------------------------------------------- >NEURAL CELL ADHESION MOLE; SWP:P13596; PDB:1EPFA; LQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSS ---------------------1-------------------------------------- TLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVC ----------------1------------------------------------------2 DVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEI -------------------------------------------------2---------- NFKDIQVIV --------- >PORCINE E-TRYPSIN; SWP:P00761; PDB:1EPTA; IVGGYTCAANSIPYQVSLNSGSHFCGGSLINSQWVVSAAHCYK ------------------------1---------------1-- >BOTULINUM NEUROTOXIN TYPE; SWP:P10844; PDB:1EPWA; PVTINNFNYNDPIDNNNIIMMEPPFARGTGRYYKAFKITDRIWIIPERYTFGYKPEDFNK ------------------------------------------------------------ SSGIFNRDVCEYYDPDYLNTNDKKNIFLQTMIKLFNRIKSKPLGEKLLEMIINGIPYLGD ------------------------------------------------------------ RRVPLEEFNTNIASVTVNKLISNPGEVERKKGIFANLIIFGPGPVLNENETIDIGIQNHF ------------------------------------------------------------ ASREGFGGIMQMKFCPEYVSVFNNVQENKGASIFNRRGYFSDPALILMHELIHVLHGLYG ------------------------------------------------------------ IKVDDLPIVPNEKKFFMQSTDAIQAEELYTFGGQDPSIITPSTDKSIYDKVLQNFRGIVD ------------------------------------------------------------ RLNKVLVCISDPNININIYKNKFKDKYKFVEDSEGKYSIDVESFDKLYKSLMFGFTETNI ------------------------------------------------------------ AENYKIKTRASYFSDSLPPVKIKNLLDNEIYTIEEGFNISDKDMEKEYRGQNKAINKQAY ------------------------------------------------------------ EEISKEHLAVYKIQMCKSVGICIDVDNEDLFFIADKNSFSDDLSKNERIEYNTQSNYIEN ---------------1-----1-------------------------------------- DFPINELILDTDLISKIELPSENTESLTDFNVDVPVYEKQPAIKKIFTDENTIFQYLYSQ ------------------------------------------------------------ TFPLDIRDISLTSSFDDALLFSNKVYSFFSMDYIKTANKVVEAGLFAGWVKQIVNDFVIE ------------------------------------------------------------ ANKSNTMDKIADISLIVPYIGLALNVGNETAKGNFENAFEIAGASILLEFIPELLIPVVG ------------------------------------------------------------ AFLLESYIDNKNKIIKTIDNALTKRNEKWSDMYGLIVAQWLSTVNTQFYTIKEGMYKALN ------------------------------------------------------------ YQAQALEEIIKYRYNIYSEKEKSNINIDFNDINSKLNEGINQAIDNINNFINGCSVSYLM ------------------------------------------------------------ KKMIPLAVEKLLDFDNTLKKNLLNYIDENKLYLIGSAEYEKSKVNKYLKTIMPFDLSIYT ------------------------------------------------------------ NDTILIEMFNKYNSEILNNIILNLRYKDNNLIDLSGYGAKVEVYDGVELNDKNQFKLTSS ------------------------------------------------------------ ANSKIRVTQNQNIIFNSVFLDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMKNNSGWKI ------------------------------------------------------------ SIRGNRIIWTLIDINGKTKSVFFEYNIREDISEYINRWFFVTITNNLNNAKIYINGKLES ------------------------------------------------------------ NTDIKDIREVIANGEIIFKLDGDIDRTQFIWMKYFSIFNTELSQSNIEERYKIQSYSEYL ------------------------------------------------------------ KDFWGNPLMYNKEYYMFNAGNKNSYIKLKKDSPVGEILTRSKYNQNSKYINYRDLYIGEK ------------------------------------------------------------ FIIRRKSNSQSINDDIVRKEDYIYLDFFNLNQEWRVYTYKYFKKEEEKLFLAPISDSDEF ------------------------------------------------------------ YNTIQIKEYDEQPTYSCQLLFKKDEESTDEIGLIGIHRFYESGIVFEEYKDYFCISKWYL ------------------------------------------------------------ KEVKRKPYNLKLGCNWQFIPKDEGWTE --------------------------- >CHYMOTRYPSIN; SWP:NA; PDB:1EQ9A; IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDLSN -------------------------1---------------1----- >EXO-(B)-(1,3)-GLUCANASE; SWP:P29717; PDB:1EQCA; AWDYDNNVIRGVNLGGWFVLEPYMTPSLFEPFQNGNDQSGVPVDEYHWTQTLGKEAALRI ------------------------------------------------------------ LQKHWSTWITEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKN ------------------------------------------------------------ NIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLNTIFKKYGGNEYSDVVIG ------------------------------------------------------------ IELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAFQVFGYWNNFLTVAEGQW ------------------------------------------------------------ NVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNVAGEWSAALTDCAKWLNG ----------------------------1------------------------2------ VNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRYIEAQLDAFEYTGGWVFWSWK -------------------2---------------------------------------- TENAPEWSFQTLTYNGLFPQPVTDRQFPNQCGFH ------------------------------1--- >RNA POLYMERASE II TRANSCR; SWP:P21675; PDB:1EQFA; GTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYY -----1------------------------------------------------------ KIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCD ------------------------------------------------------------ EKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVP ------------------------------------------------------------ DYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVN ------------------------------------------------------------ VCYQTLTEYDEHLTQLEKDICTAKEAA --------------------1------ >PHEROMONE ER-2; SWP:P26886; PDB:1ERD; DPMTCEQAMASCEHTMCGYCQGPLYMTCIGITTDPECGLP ----1------2----3--1-------3--------2--- >PHEROMONE ER-10; SWP:P12350; PDB:1ERP; DLCEQSALQCNEQGCHNFCSPEDKPGCLGMVWNPELCP --1------2----3---1-------3---------2- >PHEROMONE ER-11; SWP:P26887; PDB:1ERY; DECANAAAQCSITLCNLYCGPLIEICELTVMQNCEPPFS --1------2----3---1------3-------2----- >ESTERASE; SWP:P22266; PDB:1ESC; DPVPTVFFGDSYTANFGIAPVTNQDSERGWCFQAKENYPAVATRSLADKGITLDVQADVS ------------------------------1----------------------------- CGGALIHHFWEKQELPFGAGELPPQQDALKQDTQLTVGSLGGNTLGFNRILKQCSDELRK 1----------------------------------------------------2------ PSLLPGDPVDGDEPAAKCGEFFGTGDGKQWLDDQFERVGAELEELLDRIGYFAPDAKRVL -----------------2------------------------------------------ VGYPRLVPEDTTKCLTAAPGQTQLPFADIPQDALPVLDQIQKRLNDAMKKAAADGGADFV -------------3---------------------------------------------- DLYAGTGANTACDGADRGIGGLLEDSQLELLGTKIPWYAHPNDKGRDIQAKQVADKIEEI -----------3------------------------------------------------ LN -- >FLT3 LIGAND; SWP:P49771; PDB:1ETEA; TQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDDELCGGLWRLVLAQRWMERL ---1---------------------------------------2---------------- KTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCLRFVQTNISRLLQETSEQLVALKPWIT ------------------------1-------3--------------------------- RQNFSRCLELQCQP ------2----3-- >TRIACYLGLYCEROL ACYL-HYDR; SWP:P00591; PDB:1ETHA; SEVCFPRLGCFSDDAPWAGIVQRPLKILPWSPKDVDTRFLLYTNQNQNNYQELVADPSTI ---1-----1-------------------------------------------------- TNSNFRMDRKTRFIIHGFIDKGEEDWLSNICKNLFKVESVNCICVDWKGGSRTGYTQASQ ------------------------------2----------2------------------ NIRIVGAEVAYFVEVLKSSLGYSPSNVHVIGHSLGSHAAGEAGRRTNGTIERITGLDPAE ------------------------------------------------------------ PCFQGTPELVRLDPSDAKFVDVIHTDAAPIIPNLGFGMSQTVGHLDFFPNGGKQMPGCQK ---------------------------------------------------------3-- NILSQIVDIDGIWEGTRDFVACNHLRSYKYYADSILNPDGFAGFPCDSYNVFTANKCFPC ---------------------3-----------------------4----------4--5 PSEGCPQMGHYADRFPGKTNGVSQVFYLNTGDASNFARWRYKVSVTLSGKKVTGHILVSL ----5------------------------------------------------------- FGNEGNSRQYEIYKGTLQPDNTHSDEFDSDVEVGDLQKVKFIWYNVINPTLPRVGASKIT ------------------------------------------------------------ VERNDGKVYDFCSQETVREEVLLTLNPC -----------6---------------6 >FAB NC10.14 - LIGHT CHAIN; SWP:NA; PDB:1ETZH; QVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGEGLEWLADIWWNDKKY ---------------------1-------------------------------------- YNPSLKSRLTVSKDTSSNQVFLKITSVDTSDTATYHCARRTFSYYYGSSFYYFDNWGQGT ------------------------------------1----------------------- TLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFP --------------------------------2--------------------------- ALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGP ---------------------------2-------------------- >Putative uncharacterized ; SWP:Q0VDX6; PDB:1ETZL; FAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYAIWVQEKPDHLFSGLIGGTNNRVPGV ---------------------1-------------------------------------- PARFSGSLIGDKAALTVTGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLGQPKSSPSVTL -----------------------------1------------------------------ FTPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSY ----------------2------------------------------------------- LTLTARAWERHSSYSCQVTHEGHTVEKSLSRAECS ---------------2------------------- >Fibroblast growth factor ; SWP:P21802; PDB:1EV2E; NKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKV -----------------------------1------------------------------ RNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSPHRPILQAGLPANASDV ---------------------1-------------------------------------- EFVCKVYSDAQPHIQWIKHVPYLKVLKAAGVNTTDKEIEVLYIRNVTFEDAGEYTCLAGN ---2---------------------------------------------------2---- SIGISFHSAWLTVL -------------- >ONCOSTATIN M; SWP:P13725; PDB:1EVSA; GSCSKEYRVLLGQLQKQTDLMQDTSRLLDPYIRIQGLDVPKLREHCRERPGAFPSEETLR --1------------------------------------------2-------------- GLGRRGFLQTLNATLGCVLHRLADLEQRLPKAQDLERSGLNIEDLEKLQMARPNILGLRN ------------------------------------------------------------ NIYCMAQLLDNASDAFQRKLEGCRFLHGYHRFMHSVGRVFSKW ---1------------------2-------------------- >ALLERGEN EQU C 1; SWP:Q95182; PDB:1EW3A; VAIRNFDISKISGEWYSIFLASDVKEKIEENGSMRVFVDVIRALDNSSLYAEYQTKVNGE ------------------------------------------------------------ CTEFPMVFDKTEEDGVYSLNYDGYNVFRISEFENDEHIILYLVNFDKDRPFQLFEFYARE 1----------------------------------------------------------- PDVSPEIKEEFVKIVQKRGIVKENIIDLTKIDRCFQLRG ---------------------------------1----- >BACTERICIDAL/PERMEABILITY; SWP:P17213; PDB:1EWFA; VNPGVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDIRE ------------------------------------------------------------ FQLPSSQISMVPNVGLKFSISNANIKISGKWKAQKRFLKMSGNFDLSIEGMSISADLKLG ------------------------------------------------------------ SNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCEKVTN --------------1---------------------------------------1----- SVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHNPPPFA ------------------------------------------------------------ PPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMIPKESKFRLTTKFFGT ------------------------------------------------------------ FLPEVAKKFPNMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVLPNSALASLFLIGM ------------------------------------------------------------ HTTGSMEVSAESNRLVGELKLDRLLLELKHSNIGPFPVELLQDIMNYIVPILVLPRVNEK ------------------------------------------------------------ LQKGFPLPTPARVQLYNVVLQPHQNFLLFGADVVYK ------------------------------------ >METABOTROPIC GLUTAMATE RE; SWP:P23385; PDB:1EWKA; RSVARMDGDVIIGALFSVHHQPPAEKVPERKCGEIREQYGIQRVEAMFHTLDKINADPVL -------------------------------1---------------------------- LPNITLGSEIRDSCWHSSVALEQSIEFIRKPIAGVIGPGSSSVAIQVQNLLQLFDIPQIA -------------1---------------------------------------------- YSATSIDLSDKTLYKYFLRVVPSDTLQARAMLDIVKRYNWTYVSAVHTEGNYGESGMDAF ------------------------------------------------------------ KELAAQEGLCIAHSDKIYSNAGEKSFDRLLRKLRERLPKARVVVCFCEGMTVRGLLSAMR --------------------------------------------2-2------------- RLGVVGEFSLIGSDGWADRDEVIEGYEVEANGGITIKLQSPEVRSFDDYFLKLRLDTNTR ------------------------------------------------------------ NPWFPEFWQHRFQCRLPGHLLENPNFKKVCTGNESLEENYVQDSKMGFVINAIYAMAHGL -------------3---------------3------------------------------ QNMHHALCPGHVGLCDAMKPIDGRKLLDFLIKSSFVGVSGEEVWFDEKGDAPGRYDIMNL -------4------4--------------------------------------------- QYTEANRYDYVHVGTWHEGVLNIDDYKI ---------------------------- >RK-1 DEFENSIN; SWP:P81655; PDB:1EWSA; MPCSCKKYCDPWEVIDGSCGLFNSKYICCREK --1-2---3---------2--------31--- >PROTEIN MAF; SWP:Q02169; PDB:1EX2A; MTKPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADL ------------------------------------------------------------ HPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQAENHSETFYD -------------1----1----------------------------------------- KTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGDYYSVMGLPISKTMR ------------------------------------------------------------ ALRHF ----- >LACTONIZING LIPASE; SWP:P26876; PDB:1EX9A; STYTQTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQL ------------------------------------------------------------ LQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGSDTADFLRQ ------------------------------------------------------------ IPPGSAGEAVLSGLVNSLGALISFLSSGSTGTQNSLGSLESLNSEGAARFNAKYPQGIPT ------------------------------------------------------------ SACGEGAYKVNGVSYYSWSGSSPLTNFLDPSDAFLGASSLTFKNGTANDGLVGTCSSHLG --1---------------------------------------------------1----- MVIRDNYRMNHLDEVNQVFGLTSLFETSPVSVYRQHANRLKNASL --------------------------------------------- >EXO-1,4-BETA-D-GLYCANASE; SWP:P07986; PDB:1EXG; ASSGPAGCQVLWGVNQWNTGFTANVTVKNTSSAPVDGWTLTFSFPSGQQVTQAWSSTVTQ -------1---------------------------------------------------- SGSAVTVRNAPWNGSIPAGGTAQFGFNGSHTGTNAAPTAFSLNGTPCTVG ----------------------------------------------1--- >BETA-LACTOGLOBULIN; SWP:P04119; PDB:1EXSA; VEVTPIMTELDTQKVAGTWHTVAMAVSDVSLLDAKSSPLKAYVEGLKPTPEGDLEILLQK ------------------------------------------------------------ RENDKCAQEVLLAKKTDIPAVFKINALDENQLFLLDTDYDSHLLLCMENSASPEHSLVCQ -----1---------------------------------------2------------2- SLARTLEVDDQIREKFEDALKTLSVPMRILPAQLEEQCRV -------------------------------------1-- >TUMOR NECROSIS FACTOR REC; SWP:P19438; PDB:1EXTA; SVCPQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLS --1-------------12--3---------2--------3--4--------------4-- CSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQEK 5--6-----------5-------6-7---------------7--8--9--------8--- QNTVCTCHAGFFLRENECVSCSNCKKSLECTKLCLPQIEN ----9-a----------a--b--c-----c---b------ >IGG RECEPTOR FCRN LARGE S; SWP:P55899; PDB:1EXUA; HLSLLYHLTAVSSPAPGTPAFWVSGWLGPQQYLSYNSLRGEAEPCGAWYWEKETTDLRIK ------------------------------------------------------------ EKLFLEAFKALGGKGPYTLQGLLGCELGPDNTSVPTAKFALNGEEFMNFDLKQGTWGGDW ------------------------1----------------------------------- PEALAISQRWQQQDKAANKELTFLLFSCPHRLREHLERGRGNLEWKEPPSMRLKARPSSP ---------------------------1-------------------------------- GFSVLTCSAFSFYPPELQLRFLRNGLAAGTGQGDFGPNSDGSFHASSSLTVKSGDEHHYC ------2----------------------------------------------------- CIVQHAGLAQPLRVEL 2--------------- >STEM CELL FACTOR; SWP:P21583; PDB:1EXZA; CRNRVTNNVKDVTKLVANLPKDYMITLKYVPGMDVLPSHCWISEMVVQLSDSLTDLLDKF 1--------------------------------------2-------------------- SNISEGLSNYSIIDKLVNIVDDLVECVKENSSKDLKKSFKSPEPRLFTPEEFFRIFNRSI -------------------------1---------------------------------- DAFKDFVVASDCV -----------2- >CHYMOTRYPSIN INHIBITOR; SWP:P10822; PDB:1EYLA; EFDDDLVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPI ------------------------------------------1----------------- RISSQFLSLFIPRGSLVALGFANPPSCAASPWWTVVDSPQGPAVKLSQQKLPEKDILVFK --------------------------1--------------------------------- FEKVSHSNIHVYKLLYCQHDEEDVKCDQYIGIHRDRNGNRRLVVTEENPLELVLLKAKS ----------------2--------2--------------------------------- >THERMAL HYSTERESIS PROTEI; SWP:O16119; PDB:1EZGA; QCTGGADCTSCTGACTGCGNCPNAVTCTNSQHCVKANTCTGSTDCNTAQTCTNSKDCFEA -1-----2--1---3--2--3-----4-----4-----5-----5-----6-----6--- NTCTDSTNCYKATACTNSSGCP --7-----7-----8-----8- >ECOTIN; SWP:P23827; PDB:1EZSA; PYPQAEKGMKRQVIQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLENKTAYYVFDKV --------------------------------------1--------------------- SSPVSTRMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKID ---------1-------------------------------------------------- NAVVR ----- >Ig heavy chain V region M; SWP:P18531; PDB:1EZVX; EVKLQESGAGLVQPSQSLSLTCSVTGYSITSGYYWNWIRLFPGNKLEWVGYISNVGDNNY ---------------------1-------------------------------------- NPSLKDRLSITRDTSKNQFFLKLNSVTTEDTATYYCARSEYYSVTGYAMDYWGQGTTVTV -----------------------------------1------------------------ SSAWRHP ------- >Ig kappa chain V-V region; SWP:P01647; PDB:1EZVY; DIELTQTPVSLAASLGDRVTISCRASQDINNFLNWYQQKPDGTIKLLIYYTSRLHAGVPS ----------------------1------------------------------------- RFSGSGSGTDYSLTISNLEPEDIATYFCQHHIKFPWTFGAGTKLEIK ---------------------------1------------------- >DIPHTHERIA TOXIN; SWP:P00587; PDB:1F0LA; GADDVVDSSKSFVMENFSSYHGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKY ------------------------------------------------------------ DAAGYSVDNENPLSGKAGGVVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGT ------------------------------------------------------------ EEFIKRFGDGASRVVLSLPFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYE ------------------------------------------------------------ YMAQACACINLDWDVIRDKTKTKIESLKEHGPIKNKMSESPNKTVSEEKAKQYLEEFHQT -----1-1---------------------------------------------------- ALEHPELSELKTVTGTNPVFAGANYAAWAVNVAQVIDSETADNLEKTTAALSILPGIGSV ------------------------------------------------------------ MGIADGAVHHNTEEIVAQSIALSSLMVAQAIPLVGELIGFAAYNFVESIINLFQVVHNSY ------------------------------------------------------------ NRPAYSPGHKTQPFLHDGYAVSWNTVEDSIIRTGFQGESGHDIKITAENTPLPIAGVLLP ------------------------------------------------------------ TIPGKLDVNKSKTHISVNGRKIRMRCRAIDGDVTFCRPKSPVYVGNGVHANLHVAFHRSS -------------------------2---------2------------------------ SEKIHSNEISSDSIGVLGYQKTVDHTKVNSKLSLFFEIKS ---------------------------------------- >ANTIGEN 85B; SWP:P31952; PDB:1F0NA; SRPGLPVEYLQVPSPSMGRDIKVQFQSGGNNSPAVYLLDGLRAQDDYNGWDINTPAFEWY ------------------------------------------------------------ YQSGLSIVMPVGGQSSFYSDWYSPACGKAGCQTYKWETFLTSELPQWLSANRAVKPTGSA -------------------------1----1----------------------------- AIGLSMAGSSAMILAAYHPQQFIYAGSLSALLDPSQGMGPSLIGLAMGDAGGYKAADMWG ------------------------------------------------------------ PSSDPAWERNDPTQQIPKLVANNTRLWVYCGNGTPNELGGANIPAEFLENFVRSSNLKFQ ------------------------------------------------------------ DAYNAAGGHNAVFNFPPNGTHSWEYWGAQLNAMKGDLQSSLGAG -------------------------------------------- >COPPER-ZINC SUPEROXIDE DI; SWP:P00445; PDB:1F1GA; VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSA --------------------------------------------------------1--- GPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIH ------------------------------------------------------------ AGQDDLGKGDTEESLKTGNAGPRPACGVIGLTN -------------------------1------- >FRACTALKINE; SWP:P78423; PDB:1F2LA; VTKCNITCSKMTSKIPVALLIHYQQNQASCGKRAIILETRQHRLFCADPKEQWVKDAMQH ---1---2---------------------1---------------2-------------- LDRQ ---- >HIGH AFFINITY IMMUNOGLOBU; SWP:P12319; PDB:1F2QA; KPKVSLNPPWNRIFKGENVTLTCNGNNFSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYK ----------------------1------------------------------------- CQHQQVNESEPVYLEVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEAL 1--------------------------------------2-------------------- KYWYENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR -----------------------2----------------------- >ANTIBODY HEAVY CHAIN; SWP:NA; PDB:1F2XK; QVQLVESGGGSVQAGGSLRLSCAASGYTVSTYCMGWFRQAPGKEREGVATILGGSTYYGD ---------------------1----------2--------------------------- SVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYYCAGSTVASTGWCSRLRPYDYHYRGQGT ---------------------------------1----------2--------------- QVTVSS ------ >MAJOR PEPSIN INHIBITOR PI; SWP:P19400; PDB:1F32A; FLFSMSTGPFICTVKDNQVFVANLPWTMLEGDDIQVGKEFAARVEDCTNVKHDMAPTCTK -----------1----------------------------------2----------2-- PPPFCGPQDMKMFNFVGCSVLGNKLFIDQKYVRDLTAKDHAEVQTFREKIAAFEEQSPPP ----1------------3------------------------------------------ PPSFCTV ----3-- >PEPSIN A; SWP:P00791; PDB:1F34A; IGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDD --------------------------------------------1----1---------- SSTFEATQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGIL ------------------------------------------------------------ GLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNW ------------------------------------------------------------ VPVSVEGYWQITLDSITMDGETIACSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASENS ------------------------2---2------------------------------- DGEMVISCSSIDSLPDIVFTINGVQYPLSPSAYILQDDDSCTSGFEGMDVPTSSGELWIL -------3--------------------------------3------------------- GDVFIRQYYTVFDRANNKVGLAPVA ------------------------- >REPRESSOR PROTEIN CI; SWP:P03034; PDB:1F39A; ASASAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFCIARLGGDEFTFKKLI ------------------------------------------------------------ RDSGQVFLQPLNPQYPMIPCNESCSVVGKVIASQWPEETFG -------------------1---1----------------- >SURVIVIN; SWP:O15392; PDB:1F3HA; TLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDMAQCFFCFKEL ----------------------------------------------------1--1---- EGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNKKKEF ------------------------------------------------------------ EETAKKVRRAIEQLAA ---------------- >INTERLEUKIN-12 BETA CHAIN; SWP:P29460; PDB:1F42A; IWELKKDVYVVELDWYPDAPGEMVVLTCDTPEEDGITWTLDQSSEVLGSGKTLTIQVKEF ---------------------------1-------------------------------- GDAGQYTCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTC -------1----------------------------------------2----------2 WWLTTISTDLTFSVKSSRGGVTCGAATLSAERVRGDNKEYEYSVECQEDSACPAAEESLP ----------------------3----------------------3-------------- IEVMVDAVHKLKYENYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHS ------------------------------------------------------------ YFSLTFCVQVQGKSKRRVFTDKTSATVICRKNASISVRAQDRYYSSSWSEWASVPCS ----------------------------4--------------------------4- >Interleukin-12 subunit al; SWP:P29459; PDB:1F45B; QNLLRAVSNMLQKARQTLEFYPCSTVEACLPLELTKNESCTSFITNGSSFMMALCLSSIY ----------------------1-----2-------------------------2----- EDLKMYQVEFKTMNAKLLMDPKRQIFLDQNMLAVIDELMQALYKTKIKLCILLHAFRIRA -------------------------------------------------1---------- VTIDRVMSYLNAS ------------- >ANTIBODY S-20-4, FAB FRAG; SWP:NA; PDB:1F4XH; EVQLEESGGGLVTPGGSLRLSCAASGYVFSTYDMSWVRQTPEKRLEWVAFISSGGGRTSY ---------------------1-------------------------------------- PDTVKGRFTISRDDAKNTLYLQMSSLQSEDTAMYYCTRHFYAVLDYWGRGTTLTVSSAKT -----------------------------------1------------------------ TPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYT -----------------------2------------------------------------ LSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP ------------------2----------------- >Putative uncharacterized ; SWP:Q0VDX6; PDB:1F4XL; QAVVTQESALTTSPGETVTLTCRSSTGTVTTSNYANWVQEKPDHLFTGLIGATNNRAAGV ---------------------1-------------------------------------- PVRFSGSLIGGKAALTITGAQTEDEAIYFCALWYSGHWVFGGGTKLTVLGQPKSSPSVTL -----------------------------1------------------------------ FPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTNPSKQSNNKYMASSY ----------------2------------------------------------------- LTLTARAWERHSSYSCQVTHEGHTVEKSLS ---------------2-------------- >YEAST KILLER TOXIN-LIKE P; SWP:NA; PDB:1F53A; IDHVPCRGGENFLKIWSHSGGQQSVDCYANRGRIDFGGWWVDKISTGNNDLIYYDANGDS -----1--------------------1--------------------------------- VRVDRWHDITYPNRPPKVNSIEIL ------------------------ >PLANTACYANIN; SWP:O82080; PDB:1F56A; AVYNIGWSFNVNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYSSGQ ----------------------------------------------1------------- DRIKLTRGQNYFICSFPGHCGGGMKIAINAK -------------------1----------- >GAF; SWP:P36088; PDB:1F5MA; STGFHHADHVNYSSNLNKEEILEQLLLSYEGLSDGQVNWVCNLSNASSLIWHAYKSLAVD ------------------------------------------------------------ INWAGFYVTQASEENTLILGPFQGKVACQMIQFGKGVCGTAASTKETQIVPDVNKYPGHI ---------------------------1-------------------------------- ACDGETKSEIVVPIISNDGKTLGVIDIDCLDYEGFDHVDKEFLEKLAKLINKSCVF -1------------------------------------------------------ >LOW-DENSITY LIPOPROTEIN R; SWP:P01130; PDB:1F5YA; GSAVGDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRV -------1------2----1------3-----2----------3----4------5---- NRCIPQFWRCDGQVDCDNGSDEQGC --4------6-----5--------6 >PLACENTAL LACTOGEN; SWP:P16038; PDB:1F6FA; AQHPPYCRNQPGKCQIPLQSLFDRATTVANYNSKLAGEMVNRFDEQYVINCHTSSITTPN ------1------1------------------------------------2--------- SKAEAINTEDKILFKLVISLLHSWDEPLHHAVTELANPALLTKAQEIKEKAKVLVDGVEV ------------------------------------------------------------ IQKRIHPGEKNEPYPVWSEQSSLTSQDENVRRVAFYRLFHCLHRDSSKIYTYLRILKCRL ----------------------------------------2----------------3-- TSC --3 >Prolactin receptor [Precu; SWP:P05710; PDB:1F6FB; GKPEIHKCRSPDKETFTCWWNPGTDGGLPTNYSLTYSKEGEKTTYECPDYKTSGPNSCFF -------1---------1----------------------------2----------2-- SKQYTSIWKIYIITVNATNQMGSSSSDPLYVDVTYIVEPEPPRNLTLEVKKKTYLWVKWS ------------------------------------------------------------ PPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFTGHQTQFKVFDLYPGQKYLVQTRCKPDH ------------------------------------------------------------ GYWSRWSQESSVEMP --------------- >Ig kappa chain V-I region; SWP:P01600; PDB:1F6LL; DIQMTQSPASLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQLLVYNAKTLAEGVPS ----------------------1------------------------------------- RFSGSGSGTQFSLKINSLQPEDFGSYYCQHHYGTPFTFGSGTKLEI ---------------------------1------------------ >ALPHA-LACTALBUMIN; SWP:P00711; PDB:1F6RA; EQLTKCEVFRELKDLKGYGGVSLPEWVCTTFHTSGYDTQAIVQNNDSTEYGLFQINNKIW -----1---------------------2-------------------------------- CKDDQNPHSSNICNISCDKFLDDDLTDDIMCVKKILDKVGINYWLAHKALCSEKLDQWLC 3-----------4---3-------------4-------------------2--------1 EKL --- >BILE SALT ACTIVATED LIPAS; SWP:P19835; PDB:1F6WA; AKLGAVYTEGGFVEGVNKKLGLLGDSVDIFKGIPFAAPTKALENPQPHPGWQGTLKAKNF ------------------------------------------------------------ KKRCLQATITQDSTYGDEDCLYLNIWVPQGRKQVSRDLPVMIWIYGGAFLMGSGHGANFL ---1---------------1---------------------------------------- NNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDANLPGNYGLRDQHMAIAWVKRNIAA ------------------------------------------------------------ FGGDPDNITLFGESAGGASVSLQTLSPYNKGLIRRAISQSGVALSPWVIQKNPLFWAKKV ------------------------------------------------------------ AEKVGCPVGDAARMAQCLKVTDPRALTLAYKVPLAGLEYPMLHYVGFVPVIDGDFIPDDP -----2----------2------------------------------------------- INLYANAADIDYIAGTNNMDGHIFASIDMPAINKGNKKVTEEDFYKLVSEFTITKGLRGA ------------------------------------------------------------ KTTFDVYTESWAQDPSQENKKKTVVDFETDVLFLVPTEIALAQHRANAKSAKTYAYLFSH ------------------------------------------------------------ PSRMPVYPKWVGADHADDIQYVFGKPFATPTGYRPQDRTVSKAMIAYWTNFAKTGDPNMG ------------------------------------------------------------ DSAVPTHWEPYTTENSGYLEITKKMGSSSMKRSLRTNFLRYWTLTYLALPTVT ----------------------------------------------------- >BLOOD COAGULATION FACTOR ; SWP:P08709; PDB:1F7EA; SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDGSA -----1----2-----1--------2-3--------3--------- >NEURAMINIDASE; SWP:P03472; PDB:1F8EA; RDFNNLTKGLCTINSWHIYGKDNAVRIGEDSDVLVTREPYVSCDPDECRFYALSQGTTIR ------------------------------------------1----1------------ GKHSNGTIHDRSQYRALISWPLSSPPTV ---------------------------- >BUCANDIN; SWP:P81782; PDB:1F94A; MECYRCGVSGCHLKITCSAEETFCYKWLNKISNERWLGCAKTCTEIDTWNVYNKCCTTNL --1--2----2-----3------1--------------3---4-----------45---- CNT 5-- >JUNCTION ADHESION MOLECUL; SWP:O88792; PDB:1F97A; KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRV ----------------------1------------------------------------- TFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGN ---------------------1-------------------------------------- RAVLTCSEHDGSPPSEYSWFKDGISMLTTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYY -----2------------------------------------------------------ CQAQNGYGTAMRSEAAHMDAVELNVGG 2-------------------------- >PLATELET FACTOR 4; SWP:P02776; PDB:1F9RA; GDLQCLCVKTTSQVRPRHITSLEVIKAGPHCAVPQLIATLKNGRKICLDLQAPLYKKIIK ----1-2-----------------------1---------------2------------- KLLES ----- >THIOREDOXIN F; SWP:P09856; PDB:1FAAA; LELALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLA ---------------------------------------------1--1----------- EEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAAR ------------------------------------------------------------ S - >IGG2B-KAPPA R19.9 FAB (HE; SWP:NA; PDB:1FAIH; QVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGVNWVKQRPGQGLEWIGYINPGKGYLSY ---------------------1-------------------------------------- NEKFKGKTTLTVDRSSSTAYMQLRSLTSEDAAVYFCARSFYGGSDLAVYYFDSWGQGTTL -----------------------------------1------------------------ TVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPAL ------------------------------2----------------------------- LQSALYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKL -------------------------2--------------- >Pancreatic trypsin inhibi; SWP:P00974; PDB:1FAKI; APDFCLEPPYDGPCRALHLRYFYNAKAGLCQTFYYGGCLAKRNNFESAEDCMRTC ----1--------2-----------------------2----------------1 >DUAL ADAPTOR OF PHOSPHOTY; SWP:Q9UN19; PDB:1FAOA; PSLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYS ------------------------------------------------------------ QERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQI -----1------------1--------------------- >FASCICULIN 1; SWP:P0C1Y9; PDB:1FAS; TMCYSHTTTSRAILTNCGENSCYRKSRRHPPKMVLGRGCGCPPGDDYLEVKCCTSPDKCN --1-------------2----1----------------2-3----------34-----4- Y - >THIOREDOXIN M; SWP:P07591; PDB:1FB6A; VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEA ----------------------------1--1---------------------------- PGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL -------------------------------------------- >GUINEA FOWL LYSOZYME; SWP:GC1_MOUSE; PDB:1FBIH; QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQGPGQGLEWIGEIDPSDSYPNY ---------------------1-------------------------------------- NEKFKGKATLTVDKSSSTAYMQLSSLTSEDSAVYYCASLYYYGTSYGVLDYWGQGTSVTV -----------------------------------1------------------------ SSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQ ----------------------------2------------------------------- SDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP -----------------------2----------------- >FIBROBLAST (INTERSTITIAL); SWP:P21692; PDB:1FBL; FVLTPGNPRWENTHLTYRIENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVSEGQADI ------------------------------------------------------------ MISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKNFRDYNLYRVAAHE ------------------------------------------------------------ LGHSLGLSHSTDIGALMYPNYIYTGDVQLSQDDIDGIQAIYGPSENPVQPSGPQTPQVCD ----------------------------------------------------------1- SKLTFDAITTLRGELMFFKDRFYMRTNSFYPEVELNFISVFWPQVPNGLQAAYEIADRDE ------------------------------------------------------------ VRFFKGNKYWAVRGQDVLYGYPKDIHRSFGFPSTVKNIDAAVFEEDTGKTYFFVAHECWR ------------------------------------------------------------ YDEYKQSMDTGYPKMIAEEFPGIGNKVDAVFQKDGFLYFFHGTRQYQFDFKTKRILTLQK ------------------------------------------------------------ ANSWFNC ------1 >FIBRONECTIN; SWP:P02751; PDB:1FBR; AEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRTSYRI ---1--------------------------2-1---------2-----3----------- GDTWSKKDNRGNLLQCICTGNGRGEWKCERHTS ---------------4-3---------4----- >FLAVOCYTOCHROME C SULFIDE; SWP:Q06530; PDB:1FCDA; AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNTDYYTCYLSNEVIGGDRKLESIKH ------------------------------------------------------------ GYDGLRAHGIQVVHDSATGIDPDKKLVKTAGGAEFGYDRCVVAPGIELIYDKIEGYSEEA ------------------------------------------------------------ AAKLPHAWKAGEQTAILRKQLEDMADGGTVVIAPPAAPFRCPPGPYERASQVAYYLKAHK ----------------------------------------1------------------- PMSKVIILDSSQTFSKQSQFSKGWERLYGFGTENAMIEWHPGPDSAVVKVDGGEMMVETA ------------------------------------------------------------ FGDEFKADVINLIPPQRAGKIAQIAGLTNDAGWCPVDIKTFESSIHKGIHVIGDASIANP ------------------------------------------------------------ MPKSGYSANSQGKVAAAAVVVLLKGEEPGTPSYLNTCYSILAPAYGISVAAIYRPNADGS ------------------------------------1----------------------- AIESVPDSGGVTPVDAPDWVLEREVQYAYSWYNNIVHDTFG ----------------------------------------- >FC RECEPTOR FC(GAMMA)RIIA; SWP:P12318; PDB:1FCGA; APPKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANN -------------------------1---------------------------------- NDSGEYTCQTGQTSLSDPVHLTVLFEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTF -------1--------------------------------------2------------- FQNGKSQKFSHLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITVQV ------------------------------2-------------------- >HYALURONOGLUCOSAMINIDASE; SWP:Q08169; PDB:1FCQA; EFNVYWNVPTFMCHKYGLRFEEVSEKYGILQNWMDKFRGEEIAILYDPGMFPALLVARNG ------------1----------------------------------------------- GVPQLGNLTKHLQVFRDHLINQIPDKSFPGVGVIDFESWRPIFRQNWASLQPYKKLSVEV ------------------------------------------------------------ VRREHPFWDDQRVEQEAKRRFEKYGQLFMEETLKAAKRMRPAANWGYYAYPYCYNLTPNQ ----------------------------------------------------2------- PSAQCEATTMQENDKMSWLFESEDVLLPSVYLRWNLTSGERVGLVGGRVKEALRIARQMT ----2------------------------------------------------------- TSRKKVLPYYWYKYQDRRDTDLSRADLEATLRKITDLGADGFIIWGSSDDINTKAKCLQF --------------------------------------------------------1--- REYLNNELGPAVKR -------------- >BETA-DEFENSIN 2; SWP:O15263; PDB:1FD3A; GIGDPVTCLKSGAICHPVFCPRRYKQIGTCGLPGTKCCKKP -------1------2----3---------2------13--- >PHOSPHOLIPASE A2; SWP:Q9DF52; PDB:1FE5A; NLIQFKNMIQCAGTRPWTAYVNYGCYCGKGGSGTPVDELDRCCYTHDNCYNEAEKIPGCN ----------1-------------2-3--------------43-----5---------6- PNIKTYSYTCTEPNLTCTDTADTCARFLCNCDRTAAICFASAPYNSNNVMISSSTNCQ ---------1------7------6----7-5------4------------------2- >VON WILLEBRAND FACTOR; SWP:NA; PDB:1FE8H; DVKLVQSGPGLVAPSQSLSITCTVSGFSLTTYGVSWVRQPPGKGLEWLGVIWGDGNTTYH ---------------------1-------------------------------------- SALISRLSISKDNSRSQVFLKLNSLHTDDTATYYCAGNYYGMDYWGQGTSVTVSSAETTA ----------------------------------1------------------------- PSVYKLEPVSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVT ---------------2-------------------------------------------- SSTWPSQSITCNVAHPASSTKVDKKIEPRG ----------2------------------- >TRYPANOTHIONE REDUCTASE; SWP:P39040; PDB:1FECA; SRAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKK --------------------------------------------------1----1---- LMVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLT ------------------------------------------------------------ FHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQHLGIEGDDLCITSNEA ------------------------------------------------------------ FYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQ ------------------------------------------------------------ LRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGV ------------------------------------------------------------ EVAKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANKPRATDHTK ------------------------------------------------------------ VACAVFSIPPMGVCGYVEEDAAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHAD ------------------------------------------------------------ GEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMRTPAYFYEKG ------------------------------------------------------------ KRVEK ----- >MUSCARINIC TOXIN/ACETYLCH; SWP:P18328; PDB:1FF4A; LTCVTTKSIGGVTTEDCPAGQNVCFKRWHYVTPKNYDIIKGCAATCPKVDNNDPIRCCGT --1-------------2------1-----------------2---3----------34-- DKCND --4-- >Anti-colorectal carcinoma; SWP:Q7TS98; PDB:1FGNL; DIKMTQSPSSMYASLGERVTITCKASQDIRKYLNWYQQKPWKSPKTLIYYATSLADGVPS ----------------------1------------------------------------- RFSGSGSGQDYSLTISSLESDDTATYYCLQHGESPYTFGGGTKLEINRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >Prolactin-binding protein; SWP:Q9QV16; PDB:1FGVH; EVQLVESGGGLVQPGGSLRLSCATSGYTFTEYTMHWMRQAPGKGLEWVAGINPKNGGTSY ---------------------1-------------------------------------- ADSVKGRFTISVDKSKNTLYLQMNSLRAEDTAVYYCARWRGLDVRYFDVWGQGTLVTVSS -----------------------------------1------------------------ >DNA rearranged by a t(2; SWP:Q6LBV5; PDB:1FGVL; DIQMTQSPSSLSASVGDRVTITCRASQDINNYLNWYQQKPGKAPKLLIYYTSTLESGVPS ----------------------1------------------------------------- RFSGSGSGTDYTLTISSLQPEDFATYYCQQGNTLPPTFGAGTKVEIK ---------------------------1------------------- >Ig heavy chain V region 6; SWP:P18528; PDB:1FH5H; SGGGLVKPAGSLKLSCAASGFTFSSYYMYWVRQTPDKRLEWVATISDGGSYTYYPDSVKG ---------------1-------------------------------------------- RFTISRDNAKNNLYLQMSSLKSEDTAMYYCARDAMDYWGQGTLVTVSAAKTTPPSVYPLA -----------------------------1------------------------------ VTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSETVTC ----2------------------------------------------------------2 NVAHPASSTKVDKKIVPR ------------------ >BETA-1,4-XYLANASE; SWP:Q59277; PDB:1FH9A; ATTLKEAADGAGRDFGFALDPNRLSEAQYKAIADSEFNLVVAENAMKWDATEPSQNSFSF ------------------------------------------------------------ GAGDRVASYAADTGKELYGHTLVWHSQLPDWAKNLNGSAFESAMVNHVTKVADHFEGKVA ------------------------------------------------------------ SWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAADPTAKLCINDYNVEGINAKS ----------------------------------------------1------------- NSLYDLVKDFKARGVPLDCVGFQSHLIVGQVPGDFRQNLQRFADLGVDVRITELDIRMRT ------------------1----------------------------------------- PSDATKLATQAADYKKVVQACMQVTRCQGVTVWGITDKYSWVPDVFPGEGAALVWDASYA --------------------2-----2--------------------------------- KKPAYAAVMEAF ------------ >SEED COAT PEROXIDASE; SWP:O22443; PDB:1FHFA; QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDT ----------1--------------------------------2----2----------- IESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVP ------------------------------1-----3----------------------- LGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFI -------------------------------------------------------4---- NRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLN ---------------------------4-------------------------------- GLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCN ----------------------------------------------------------3- FVNG ---- >MANNOSE-BINDING PROTEIN-A; SWP:P19999; PDB:1FIFA; AIEVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTNHERMPFSKVKALCSELR -------------------------------------------------------1---- GTVAIPRNAEENKAIQEVAKTSAFLGITDEVTEGQFMYVTGGRLTYSNWKKDQPDDWYGH ------------------------------------------------------------ GLGGGEDCVHIVDNGLWNDDSCQRPYTAVCEFPA -------2-------------2-------1---- >Outer surface protein A [; SWP:P14013; PDB:1FJ1B; QIQLVQSGPELKKPGETVKISCKASGYTFTDYSMYWVKQAPGKGLKRMGWINTETGEPTY ---------------------1-------------------------------------- ADDFKGRFALSLDTSASTAYLHISNLKNEDTATYFCARGLDSWGQGTSVTVSSAKTTPPS -----------------------------------1------------------------ VYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSS -------------------2---------------------------------------- VTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPS --------------2------------------ >DEFENSIN MGD-1; SWP:P80571; PDB:1FJNA; GFGCPNNYQCHRHCKSIPGRCGGYCGGWHRLRCTCYRCG ---1-----2---3------4---1-------2-3--4- >METHUSELAH ECTODOMAIN; SWP:O97148; PDB:1FJRA; DILECDYFDTVDISAAQKLQNGSYLFEGLLVPAILTGEYDFRILPDDSKQKVARHIRGCV ----1-----------------------------------------------------1- CKLKPCVRFCCPHDHIMDNGVCYDNMSDEELAELDPFLNVTLDDGSVSRRHFKNELIVQW 2----2---34----------4-------------------------------------- DLPMPCDGMFYLDNREEQDKYTLFENGTFFRHFDRVTLRKREYCLQHLTFADGNATSIRI -----5-------------------------------------3---------------- APHNCLIV ----5--- >NONSPECIFIC LIPID-TRANSFE; SWP:P19656; PDB:1FK5A; AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGV ---1---------2--------------23-------------------4-1-------- SGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN --------------3-------------4---- >ALPHA-LACTALBUMIN; SWP:P00712; PDB:1FKQA; MEQLTKCEVFQKLKDLKDYGGVSLPEWVCVAFHTSGYDTQAIVQNNDSTEYGLFQINNKI ------1---------------------2------------------------------- WCKDDQNPHSRNICNISCDKFLDDDLTDDIVCAKKILDKVGINYWLAHKALCSEKLDQWL -3-----------4---3-------------4-------------------2-------- CEKL 1--- >ALKYL HYDROPEROXIDE REDUC; SWP:P35340; PDB:1FL2A; AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAG ------------------------------------------------------------ ALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNV ------------------------------------------------------------ PGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK -------------1--1------------------------------------------- ADQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGL ------------------------------------------------------------ LPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSA ------------------------------------------------------------ FDYLIRTKTA ---------- >BLUE FLUORESCENT ANTIBODY; SWP:NA; PDB:1FL3H; AALLESGGGLVKPGGSLKLSCTASGITFSRYIMSWVRQIPEKRLEWVASISSGGITYYPD --------------------1--------------------------------------- SVAGRFTISRDNVRNILYLQMSSLRSEDTALYYCARGQGRPYWGQGTSVTVSAAKTTPPS ---------------------------------1-------------------------- VYPAAPGCGDTTGSSVTLGCLVKGYFPEPVTVTWNSGGSSVHTFPALLQSGLYTMSSSVT -------------------2---------------------------------------- VPSSTWPSTVTCSVAHPASSTTVDKKLE -----------2---------------- >BLUE FLUORESCENT ANTIBODY; SWP:NA; PDB:1FL3L; AALTQSPVSNPVTLGTSASISCRSTKSLLHSNGITYLYWYLQKPGQSPQLLIYQMSNLAS ---------------------1-------------------------------------- GVPNRFSSSGSGTDFTLRINTVEAEDVGVYYCAQNLELPPTFGAGTKLELKRADAAPTVS -------------------------------1---------------------------- IFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMS -----------------2------------------------------------------ STLTLTKDEYERHNGYTCEATHKTSTSPIVKSFN -----------------2---------------- >Follitropin subunit beta ; SWP:P01225; PDB:1FL7B; CELTNITIAIEKEECRFCISINTAWCAGYCYTRDLVYKDPARPKIQKTCTFKELVYETVR 1-------------2--3-------4---5------------------1----------- VPGCAHHADSLYTYPVATQCHCGKCDSDSTDCTVRGLGPSYCSFGEM ---2---------------4-5--6------6---------3----- >HAEMAGGLUTININ-ESTERASE-F; SWP:P07975; PDB:1FLCA; EKIKICLQKQVNSSFSLHNGFGGNLYATEEKRMFELVKPKAGASVLNQSTWIGFGDSRTD ------------------------------------------------------------ KSNSAFPRSADVSAKTADKFRFLSGGSLMLSMFGPPGKVDYLYQGCGKHKVFYEGVNWSP ---------------------------------------------1-------------- HAAINCYRKNWTDIKLNFQKNIYELASQSHCMSLVNALDKTIPLQVTAGTAGNCNNSFLK -----2------------------------1----------------------2------ NPALYTQEVKPSENKCGKENLAFFTLPTQFGTYECKLHLVASCYFIYDSKEVYNKRGCDN ---------------3------------------4-------5--------------3-- YFQVIYDSFGKVVGGLDNRVSPYTGNSGDTPTMQCDMLQLKPGRYSVRSSPRFLLMPERS ----------------------------------5------------------------- YCFDMKEKGPVTAVQSIWGKGRESDYAVDQACLSTPGCMLIQKQKPYIGEADDHHGDQEM -4-----------------------------6-----6---------------------- RELLSGLDYEARCISQSGWVNETSPFTEKYLLPPKFGRCPLAAKEESIPKIPDGLLIPTS ------------------------------------------------------------ GTDTTVT ------- >Hemagglutinin-esterase-fu; SWP:P07975; PDB:1FLCB; IDDLIIGVLFVAIVETGIGGYLLGSRKESGGGVTKESAEKGFEKIGNDIQILKSSINIAI ------------------------------------------------------------ EKLNDRISHDEQAIRDLTLEIENARSEALLGELGIIRALLVGNISIGLQESLWELASEIT ------------------------------------------------------------ NRAGDLAVEVSPGCWIIDNNICDQSCQNFIFKFNETAPVPTI ---------------------1---1---------------- >Elafin [Precursor]; SWP:P19957; PDB:1FLEI; TKPGSCPIILIRCAMLNPPNRCLKDTDCPGIKKCCEGSCGMACFVPQ -----1------2--------3-----4-----31---2---4---- >QUINOPROTEIN ETHANOL DEHY; SWP:Q9Z4J7; PDB:1FLGA; KDVTWEDIANDDKTTGDVLQYGMGTHAQRWSPLKQVNADNVFKLTPAWSYSFGDEKQRGQ ------------------------------------------------------------ ESQAIVSDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKV --------------------------------------------11-------------- FFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEF ------------------------------------------------------------ GVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESW ------------------------------------------------------------ SHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSS ------------------------------------------------------------ GEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQN ------------------------------------------------------------ AFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYS ------------------------------------------------------------ QDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVW ------------------------------------------------------------ EHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDG ------------------------------------------------------------ EQYLGVTVGYGGAVPLWGGDMADLTRPVAQGGSFWVFKLPSW ------------------------------------------ >Ig gamma-2A chain C regio; SWP:GCAM_MOUSE; PDB:1FLRH; EVKLDETGGGLVQPGRPMKLSCVASGFTFSDYWMNWVRQSPEKGLEWVAQIRNKPYNYET ---------------------1-------------------------------------- YYSDSVKGRFTISRDDSSVYLQMNNLRVEDMGIYYCTGSYYGMDYWGQGTSVTVSSAKTT -----------------------------------1------------------------ APSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTL ----------------------2------------------------------------- SSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR -----------------2------------------ >Vascular endothelial grow; SWP:P17948; PDB:1FLTX; GRPFVEMYSEIPEIIHMTEGRELVIPCRVTSPNITVTLKKFPLDTLIPDGKRIIWDSRKG --------------------------1--------------------------------- FIISNATYKEIGLLTCEATVNGHLYKTNYLTHRQT ---------------1------------------- >MHC CLASS II I-EK, ALPHA ; SWP:P04224; PDB:1FNGA; IKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGAL ------------------------------------------------------------ ANIAVDKANLDVMKERSNNTPDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVT ----------------------------------------------1------------- WLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYDCEVDHWGLEEPLRKHWEF ------------------------------------------1----------------- EE -- >LOW AFFINITY IMMUNOGLOBUL; SWP:O75015; PDB:1FNLA; EDLPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAAT --------------------------1--------------------------------- VNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVT --------1--------------------------------------2------------ YLQNGKDRKYFHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQA -------------------------------2--------------------- >von Willebrand factor [Pr; SWP:P04275; PDB:1FNSH; QVQLKESGPGLVAPSQSLSITCTVSGFSLTDYGVDWVRQPPGKGLEWLGMIWGDGSTDYN ---------------------1-------------------------------------- SALKSRLSITKDNSKSQVFLKMNSLQTDDTARYYCVRDPADYGNYDYALDYWGQGTSVTV ----------------------------------1------------------------- SSAKTTPPSVYPLAPGSSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYT -----------------------2------------------------------------ LSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCG ------------------2--------------------- >von Willebrand factor [Pr; SWP:P04275; PDB:1FNSL; DIQMTQSPSSLSASLGDRVTISCSASQDINKYLNWYQQKPDGAVKLLIFYTSSLHSGVPS ----------------------1------------------------------------- RFSGSGSGTDYSLTISNLEPEDIATYYCQQYEKLPWTFGGGTKLEVKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >EXOTOXIN TYPE A PRECURSOR; SWP:P62560; PDB:1FNUA; QQDPDPSQLHRSSLVKNLQNIYFLYEGDPVTHENVKSVDQLLSHDLIYNVSGPNYDKLKT ------------------------------------------------------------ ELKNQEMATLFKDKNVDIYGVEYYHLCYLCENAERSACIYGGVTNHEGNHLEIPKKIVVK --------------------------1----------1---------------------- VSIDGIQSLSFDIETNKKMVTAQELDYKVRKYTIDNKQLYTNGPSKYETGYIKFIPKNKE ------------------------------------------------------------ SFWFDFFPEPEFTQSKYLMIYKDNETLDNKTSQIEVYLTTK ----------------------------------------- >ALPHA-1,3-MANNOSYL-GLYCOP; SWP:P27115; PDB:1FO8A; LAVIPILVIACDRSTVRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHI ----------1-----------------------------1------------------- RQPDLSNIAVQPDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYF ------------------------------------------------------------ QATYPLLKADPSLWCVSAWNDNGKEQMVDSSKPELLYRTDFFPGLGWLLLAELWAELEPK --------------2--------------------------------------------- WPKAFWDDWMRRPEQRKGRACVRPEISRTMTFGLKFIKLNQQFVPFTQLDLSYLQQEAYD --------------------2--------------------------------------- RDFLARVYGAPQLQVEKVRTNDRKELGEVRVQYTGRDSFKAFAKALGVMDDLKSGVPRAG ------------------------------------------------------------ YRGIVTFLFRGRRVHLAPPQTWDGYDPSWT ------------------------------ >BETA-1,4-GALACTANASE; SWP:P48842; PDB:1FOBA; ALTYRGADISSLLLLEDEGYSYKNLNGQTQALETILADAGINSIRQRVWVNPSDGSYDLD ------------------------------------------------------------ YNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWSTTDLGTLKWQLYNYTLEVCNT ------------------------------------------------------------ FAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHL ------------------------------------------------------------ DDGWSWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSASATLASLKTSLANLQSTYDK ------------------------------------------------------------ PVVVVETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYWEPA ------------1----------------------------------------------- WIGNAGLGSSCADNLMVDYTTDEVYESIETLGEL ----------1----------------------- >PROCARBOXYPEPTIDASE A-S6; SWP:P05805; PDB:1FONA; SWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCISTSRTYQVVLGEYDRSVLEGSEQ -------------------1---------------1------------------------ VIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCY ------------------2--2------------------------------------3- ISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGGDTRSGCNGDSG -----------------------------4---------------4--------5----- GPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETIASN ----3--------------------5-------------------------- >IGG2A-KAPPA 17-IA FAB (HE; SWP:NA; PDB:1FORH; QGQLQQSGAELVRPGSSVKISCKASGYAFSSFWVNWVKQRPGQGLEWIGQIYPGDGDNKY ---------------------1-------------------------------------- NGKFKGKATLTADKSSTTAYMQLYSLTSEDSAVYFCARSGNYPYAMDYWGQGTSVTVSSA -----------------------------------1------------------------ KTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSGL -------------------------2---------------------------------- YTLSSSVTVTSSTWPSQTITCNVAHPASSTKVDKKIEPR --------------------2------------------ >GLUTAREDOXIN 3; SWP:P37687; PDB:1FOVA; ANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFIDAQ ----------1--1---------------------------------------------- HIGGYDDLYALDARGGLDPLLK ---------------------- >IGE HEAVY CHAIN EPSILON-1; SWP:P01854; PDB:1FP5A; VSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVNLTWSRASGKPVNHSTRKEEKQRNG ----------------------1------------------------------------- TLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPG ----------------------1------------------------------------- SRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAE --------2--------------------------------------------------- WEQKDEFICRAVHEAASPSQTVQRAVSV --------2------------------- >PROTEIN-TYROSINE PHOSPHAT; SWP:P29350; PDB:1FPRA; GFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYI ------------------------------------------------------------ NANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCV ------------------------1---------------------------------1- PYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGV ------------------------------------------------------------ PSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDI ------------------------------------------------------------ DIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETTKKKLEVL -------------------------------------------- >n/a; SWP:NA; PDB:1FRGH; EVLLVESGGDLVKPGGFLKLSCAASGFTFSSFGMSWVRHTPDKRLEWVATISNGGGYTYY ---------------------1-------------------------------------- QDSVKGRFTISRDNAKNTLFLEMTSLKSEDAGLYYCARRERYDEKGFAYWGRGTLVTVSA -----------------------------------1------------------------ AKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSD ------------------------------------------------------------ LYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR ---------------------------------------- >P-SELECTIN; SWP:P16109; PDB:1FSB; TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRE ---1----2-----1--------2-3--------3----- >MAJOR POLLEN ALLERGEN BET; SWP:NA; PDB:1FSKB; NIVLTQSPKSMSVSVGERVTLSCKASENVDTYVFWFQQKPDQSPKLLLYGPSNRYTGVPD ----------------------1------------------------------------- RFTGSGSTTDFTLTISSVQAEDLADYHCGQSYSYPYTFGGGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >MAJOR POLLEN ALLERGEN BET; SWP:NA; PDB:1FSKC; QVQLQQPGTELVRPGASVILSCKASGYTFTSYWINWVKQRPGQGLEWVGNIFPSDSYTNY ---------------------1-------------------------------------- NQKFKDKATLTVDKSSSTAYMQVNSPTSEDSAVYYCTRGARDTWFAYWGQGTLVTVSVAK -----------------------------------1------------------------ TTPPSVFPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLY ------------------------2----------------------------------- TLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC -------------------2-------------------- >N-ACETYLGALACTOSAMINE-4-S; SWP:P15848; PDB:1FSU; SRPPHLVFLLADDLGWNDVGFHGSRIRTPHLDALAAGGVLLDNYYTQPLTPSRSQLLTGR ------------------------------------------------------------ YQIRTGLQHQIIWPCQPSCVPLDEKLLPQLLKEAGYTTHMVGKWHLGMYRKECLPTRRGF --------------1---2---------------------------------2------- DTYFGYLLGSEDYYSHERCTLIDALNVTRCALDFRDGEEVATGYKNMYSTNIFTKRAIAL ------------------3----------3------------------------------ ITNHPPEKPLFLYLALQSVHEPLQVPEEYLKPYDFIQDKNRHHYAGMVSLMDEAVGNVTA ------------------------------------------------------------ ALKSSGLWNNTVFIFSTDNGGQTLAGGNNWPLRGRKWSLWEGGVRGVGFVASPLLKQKGV ------------------------------------------------------------ KNRELIHISDWLPTLVKLARGHTNGTKPLDGFDVWKTISEGSPSPRIELLHNIDPNFVDS ------------------------------------------------------------ SPCSAFNTSVHAAIRHGNWKLLTGYPGCGYWFPPPSQYNVSEIPSSDPPTKTLWLFDIDR --4------------------------4-------------------------------- DPEERHDLSREYPHIVTKLLSRLQFYHKHSVPVYFPAQDPRCDPKATGVWGPWM -----------------------------------------1------------ >RIBONUCLEASE F1; SWP:P10282; PDB:1FUS; SATTCGSTNYSASQVRAAANAACQYYQNDDTAGSSTYPHTYNNYEGFDFPVDGPYQEFPI ----1-----------------2------------------------------------- KSGGVYTGGSPGADRVVINTNCEYAGAITHTGASGNNFVGCSGTN ---------------------2------------------1---- >HYPOTHETICAL 19.5 KDA PRO; SWP:P77368; PDB:1FUXA; EFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGS -------------------------1---------------------------------- GWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQ ------------------------------------------------1----------- FKVWALKTEKIPVDSNSSGALVGYLNANKIATAEITPVYEIKLE -------------------------------------------- >Prolactin-binding protein; SWP:Q9QV16; PDB:1FVCB; EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRY ---------------------1-------------------------------------- ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSS -----------------------------------1------------------------ >IGG1-KAPPA 4D5 FAB (HEAVY; SWP:NA; PDB:1FVDB; EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRY ---------------------1-------------------------------------- ADSVKGRFTISADTSKNTLYLQMNSLRAEDTAVYYCSRWGGDGFYAMDVWGQGTLVTVSS -----------------------------------1------------------------ ASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSS --------------------------2--------------------------------- GLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC ----------------------2-------------------- >DISULFIDE BOND FORMATION ; SWP:P24991; PDB:1FVKA; AQYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYH -----------------------------1--1--------------------------- VNFMGGDLGKDLTQAWAVAMALGVEDKVTVPLFEGVQKTQTIRSASDIRDVFINAGIKGE ------------------------------------------------------------ EYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQLNPQGMDTSNMDVFVQQYAD ------------------------------------------------------------ TVKYLSEK -------- >BOTROCETIN ALPHA CHAIN; SWP:P22029; PDB:1FVUA; DCPSGWSSYEGNCYKFFQQKMNWADAERFCSEQAKGGHLVSIKIYSKEKDFVGDLVTKNI -1----------1----------------2------------------------------ QSSDLYAWIGLRVENKEKQCSSEWSDGSSVSYENVVERTVKKCFALEKDLGFVLWINLYC ------------------------------------------3----------------3 AQKNPFVCKSPPP -------2----- >Botrocetin beta chain; SWP:P22030; PDB:1FVUB; DCPPDWSSYEGHCYRFFKEWMHWDDAEEFCTEQQTGAHLVSFQSKEEADFVRSLTSEMLK -1----------1----------------2------------------------------ GDVVWIGLSDVWNKCRFEWTDGMEFDYLIAEYECVASKPTNNKWWIIPCTRFKNFVCEFQ ---------------------------------3--------------3-------2--- A - >ORYZAIN BETA CHAIN; SWP:P25777; PDB:1FWOA; DHVCDDNFSCPAGSTCSSAFGFRNLSLVWGCSPVE ---1-----2-----1--------------2---- >ANTI-H(O) LECTIN I; SWP:P22972; PDB:1FX5A; SDDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNC ------------------------------------------------------------ NTGELASFITSFSFFMETSANPKAATDGLTFFLAPPDSPLRRAGGYFGLFNDTKCDSSYQ ------------------------------------------------------1----- TVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWNKRYGLNNVANVEIIYEASSKT ----------------------------1------------------------------- LTASLTYPSDQTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQATHEVLNWYFTSTFINT ------------------------------------------------------------ >FERREDOXIN II; SWP:P00209; PDB:1FXD; PIEVNDDCMAEACVEICPDVFEMNEEGDKAVVINPDSDLDCVEEAIDSCPAEAIVRS ----------------1-----------------------1---------------- >GLYCININ G1; SWP:P04776; PDB:1FXZA; NECQIQKLNALKPDNRIESEGGLIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTNGP --1--------------------------------1------------------------ QEIYIQQGKGIFGMIYPGCPSTRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSII ------------------2----------------------------------------- DTNSLENQLDQMPRRFYLAGNQEQEFLKYQQGGSILSGFTLEFLEHAFSVDKQIAKNLQG ------------------------------------------------------------ EKGAIVTVKGGLSVIKPICTMRLRHNIGQTSSPDIYNPQAGSVTTATSLDFPALSWLRLS ------------------2----------------------------------------- AEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNF ------------------------------------------------------------ VVAARSQSDNFEYVSFKTNDTPMIGTLAGANSLLNALPEEVIQHTFNLKSQQARQIKNNN ------------------------------------------------------------ PFKFLVPPQES ----------- >TOLL-LIKE RECEPTOR 1; SWP:Q15399; PDB:1FYVA; NIPLEELQRNLQFHAFISYSGHDSFWVKNELLPNLEKEGQICLHERNFVPGKSIVENIIT -----------------------------------------1------------------ CIEKSYKSIFVLSPNFVQSEWCHYELYFAHHNLFHEGSNSLILILLEPIPQYSIPSSYHK 1----------------------------------------------------------- LKSLARRTYLEWPKEKSKRGLFWANLRAAINIKLTEQAK --------------------------------------- >Fibrinogen beta chain [Pr; SWP:P02675; PDB:1FZCB; LYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTPCTVSCNIPVVSGKE --------------------------------------------------1--------- CEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQDGSVDFGRKWDPYK 2----------------------------2------------------------------ QGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELLIEMEDWKGDKVKAHYGGFT ---------------1-------------------------------------------- VQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHNGMFFSTYDRDNDGWLTSDP ------------------------------------------------------------ RKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGTDDGVVWMNWKGSWYSMRKM ---3------------3------------------------------------------- SMKIRPFF -------- >FIBRINOGEN-420; SWP:P02671; PDB:1FZDA; GGWLLIQQRMDGSLNFNRTWQDYKRGFGSLNDEGEGEFWLGNDYLHLLTQRGSVLRVELE ------------------------------------------------------------ DWAGNEAYAEYHFRVGSEAEGYALQVSSYEGTAGDALIEGSVEEGAEYTSHNNMQFSTFD ------------------------------------------------------------ RDADQWEENCAEVYGGGWWYNNCQAANLNGIYYPGGSYDPRNNSPYEIENGVVWVSFRGA ---------1------------1------------------------------------- DYSLRAVRMKIRPLVTQ ----------------- >PLACENTA GROWTH FACTOR; SWP:P49763; PDB:1FZVA; SSEVEVVPFQEVWGRSYCRALERLVDVVSEYPSEVEHMFSPSCVSLLRCTGCCGDENLHC -----------------1------------------------------2---3------1 VPVETANVTMQLLKIRSGDRPSYVELTFSQHVRCECRPLR ---------------------------------2-3---- >LEUCOCYTE IMMUNOGLOBULIN-; SWP:Q8NHL6; PDB:1G0XA; HLPKPTLWAEPGSVITQGSPVTLRCQGTQEYRLYREKKTAPWITRIPQELVKKGQFPIPS ------------------------1----------------------------------- ITWEHAGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDS ----------1----------------------------------------------2-- QVAFDGFILCKEGEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWS ---------3-------3-----------------------------2------------ LPSDLLELLVLG ------------ >PEPTIDYL-LYS METALLOENDOP; SWP:P81054; PDB:1G12A; TYNGCSSSEQSALAAAASAAQSYVAESLSYLQTHTAATPRYTTWFGSYISSRHSTVLQHY ----1------------------------------------------------------- TDMNSNDFSSYSFDCTCTAAGTFAYVYPNRFGTVYLCGAFWKAPTTGTDSQAGTLVHESS --------------1-2-------------------2----------------------- HFTRNGGTKDYAYGQAAAKSLATMDPDKAVMNADNHEYFSENNPAQS ----------------------------------------------- >IMMUNOGLOBULIN-LIKE DOMAI; SWP:Q8WZ42; PDB:1G1CA; SMEAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNV -----------------------------------1------------------------ CELVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQAK 1------------------------------------- >CONOTOXIN EVIA; SWP:P60513; PDB:1G1PA; DDCIKYGFCSLPILKNGLCCSGACVGVCADL --1-----2---------31---2---3--- >E-SELECTIN; SWP:P16581; PDB:1G1TA; WSYNTSTEAMTYDEASAYCQQRYTHLVAIQNKEEIEYLNSILSYSPSYYWIGIRKVNNVW ------------------1----------------------------------------- VWVGTQKPLTEEAKNWAPGEPNNRQKDEDCVEIYIKREKDVGMWNDERCSKKKLALCYTA -----------------------------2------------------2-------1--- ACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIV -3----4-----3--------4-5--------5---- >GRANULIN A; SWP:P28799; PDB:1G26A; VVHCDMEVICPDGYTCCRLPSGAWGCCPFTQ ---1-----2-----1---------2----- >EOTAXIN-3; SWP:Q9Y258; PDB:1G2SA; TRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQK ---------12----------------------1---------------2---------- YISLLKTPKQL ----------- >PHOSPHOLIPASE A2; SWP:Q9DF52; PDB:1G2XA; NLQQFKNMIQCAGTRTWTAYINYGCYCGKGGSGTPVDKLDRCCYTHDHCYNQADSIPGCN ----------1-------------2-3--------------43-----5---------6- PNIKTYSYTCTQPNITCTRTADACAKFLCDCDRTAAICFASAPYNINNIMISASNSCQ ---------1------7------6----7-5------4------------------2- >MINOR COAT PROTEIN; SWP:P69168; PDB:1G3P; AETVESCLAKSHTENSFTNVKDDKTLDRYANYEGCLWNATGVVVCTGDETQCYGTWVPIG ------1---------------------------1---------2------2-------- LAIPEYGDTPIPGYTYINPLDGTYPPGTEQNPANPNPSLEESQPLNTFMFQNNRFRNRQG ------------------------------------------------------------ ALTVYTGTVTQGTDPVKTYYQYTPVSSKAMYDAYWNGKFRDCAFHSGFNEDIFVCEYQGQ -----------------------------------------3------------3----- SSDLPQPPVNA ----------- >PHOSPHOLIPASE A2; SWP:P00593; PDB:1G4IA; ALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYKQAKKLDS ----------1---------------2-3--------------43-----5--------- CKVLVDNPYTNNYSYSCSNNEITCSSENNACEAFICNCDRNAAICFSKVPYNKEHKNLDK 6---------------1------7------6----7-5------4--------------- KNC --2 >FUSION PROTEIN; SWP:P35936; PDB:1G5GA; DGRPLAAAGIVVTGDKAVNIYTSSQTGSIIIKLLPNMPKDKEACAKAPLEAYNRTLTTLL -------------------------------------------1---------------- TPLGDSIRRIQESGLSQLAVAVGKMQQFVNDQFNKTAQELDCIKITQQVGVELNLYLTEL -----------------------------------------1------------------ TTVFGPQITSPALTQLTIQALYNLAGGNMDYLLTKLGVGNNQLSSLISSGLITGNPILYD ------------------------------------------------------------ SQTQLLGIQVTLPSVGNLNNMRATYLETLSVSTTKGFASALVPKVVTQVGSVIEELDTSY ------------------------------------------------------------ CIETDLDLYCTRIVTFPMSPGIYSCLSGNTSACMYSKTEGALTTPYMTLKGSVIANCKMT 2--------2--------------3-------3-----------------------4--- TCRCADPPGIISQNYGEAVSLIDRQSCNILSLDGITLRLSGEFDATYQKNISIQDSQ -4-5----------------------5------------------------------ >ACETYL XYLAN ESTERASE II; SWP:O59893; PDB:1G66A; SCPAIHVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSS -1-------------------------------------------2-----2-------- VAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSS ------------------1---------------------3------------------- AVNMVKAAIFMGDPMFRAGLSYEVGTCAAGGFDQRPAGFSCPSAAKIKSYCDASDPYCCN --------------------------4-------------3---------5------54- GSNAATHQGYGSEYGSQALAFVKSKLG --------------------------- >BETA-LACTAMASE PSE-4; SWP:P16897; PDB:1G6AA; SKFQQVEQDVKAIEVSLSARIGVSVLDTQNGEYWDYNGNQRFPLTSTFKTIACAKLLYDA ----------------------------------------------------1------- EQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFATMTTSDNTAANIILSAVGG --------------------------------------1--------------------- PKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKAIASTLNKFLFGSALSEMNQ ------------------------------------------------------------ KKLESWMVNNQVTGNLLRSVLPAGWNIADKSGAGGFGARSITAVVWSEHQAPIIVSIYLA ------------------------------------------------------------ QTQASMEERNDAIVKIGHSIFDVYTS -------------------------- >ANTIFUNGAL PROTEIN; SWP:Q9RCK8; PDB:1G6EA; MINRTDCNENSYLEIHNNEGRDTLCFANAGTMPVAIYGVNWVESGNNVVTLQFQRNLSDP ------1-----------------1----------------------------------- RLETITLQKWGSWNPGHIHEILSIRIY --------------------------- >SHORT NEUROTOXIN 1; SWP:P82849; PDB:1G6MA; LECHNQQSSQTPTTTGCSGGENNCYKKEWRDNRGYRTERGCGCPSVKKGIGINCCTTDRC --1-------------2------1----------------2-3----------34----4 NN -- >PANCREATIC TRYPSIN INHIBI; SWP:P00974; PDB:1G6XA; RPDFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGGA ----1--------2---------------3-------2------------3---1--- >IMMUNOGLOBULIN E; SWP:P01854; PDB:1G84A; SRDFTPPTVKILQSSSDGGGHFPPTIQLLCLVSGYTPGTINITWLEDGQVMDVDLSTAST -----------------------------1------------------------------ TQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKSA ---------------------------1----------------- >Arsenite oxidase small su; SWP:Q7SIF3; PDB:1G8KB; RTTLAYPATAVSVAKNLAANEPVSFTYPDTSSPCVAVKLGAPVPGGVGPDDDIVAYSVLC ------------------------------------------------------------ THMGCPTSYDSSSKTFSCPCHFTEFDAEKAGQMICGEATADLPRVLLRYDAASDALTAVG ----1--------------1---------------------------------------- VDGLIYGRQANVI ------------- >CD81 ANTIGEN, EXTRACELLUL; SWP:P18582; PDB:1G8QA; FVNKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSSTLTALTTSVLKN -------------------------------------------12--------------- NLCPSGSNIISNLFKEDCHQKIDDLFSGKH --2--------------1------------ >ALPHA-AMYLASE; SWP:P29957; PDB:1G94A; TPTTFVHLFEWNWQDVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSR -------------------1---------------------------------------- GGNRAQFIDMVNRCSAAGVDIYVDTLINHMAAGSGTGTAGNSFGNKSFPIYSPQDFHESC -------------1---------------------------------------------2 TINNSDYGNDRYRVQNCELVGLADLDTASNYVQNTIAAYINDLQAIGVKGFRFDASKHVA ----------------2------------------------------------------- ASDIQSLMAKVNGSPVVFQEVIDQGGEAVGASEYLSTGLVTEFKYSTELGNTFRNGSLAW ------------------------------------------------------------ LSNFGEGWGFMPSSSAVVFVDNHDNQRGHGGAGNVITFEDGRLYDLANVFMLAYPYGYPK ------------------------------------------------------------ VMSSYDFHGDTDAGGPNVPVHNNGNLECFASNWKCEHRWSYIAGGVDFRNNTADNWAVTN ---------------------------3------3------------------------- WWDNTNNQISFGRGSSGHMAINKEDSTLTATVQTDMASGQYCNVLKGELSADAKSCSGEV -----------------------------------------4-------------4---- ITVNSDGTINLNIGAWDAMAIHKNAKLN ---------------------------- >H14; SWP:A2KD53; PDB:1G9EA; QVQLQESGGGLVQAGGSLRLSCAASGRTGSTYDMGWFRQAPGKERESVAAINWDSARTYY ---------------------1-------------------------------------- ASSVRGRFTISRDNAKKTVYLQMNSLKPEDTAVYTCGAGEGGTWDSWGQGTQVTVSS -----------------------------------1--------------------- >IGKV1-5 protein; SWP:Q6GMW0; PDB:1G9ML; ELELTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPA ----------------------1------------------------------------- RFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIF ---------------------------1-------------------------------- PPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQKSKDSTYSLSST ---------------2-------------------------------------------- LTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG ---------------2------------------ >INTERLEUKIN-13; SWP:P35225; PDB:1GA3A; GGPVPPSTALRELIEELVNITQNQKAPLCNGSMVWSINLTAGMYCAALESLINVSGCSAI ----------------------------1---------------2-----------1--- EKTQRMLSGFCPHKVSAGQFSSLHVRDTKIEVAQFVKDLLLHLKKLFREGRFN ----------2------------------------------------------ >SERINE-CARBOXYL PROTEINAS; SWP:P42790; PDB:1GA6A; AGTAKGHNPTEFPTIYDASSAPTAANTTVGIITIGGVSQTLQDLQQFTSANGLASVNTQT ------------------------------------------------------------ IQTGSSNGDYSDDQQGQGEWDLDSQSIVGSAGGAVQQLLFYMADQSASGNTGLTQAFNQA ------------------------------------------------------------ VSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSGDEGVYECNNRGY ---------------1--------------------------------------1----- PDGSTYSVSWPASSPNVIAVGGTTLYTTSAGAYSNETVWNEGLDSNGKLWATGGGYSVYE ------------------------------------------------------------ SKPSWQSVVSGTPGRRLLPDISFDAAQGTGALIYNYGQLQQIGGTSLASPIFVGLWARLQ ------------------------------------------------------------ SANSNSLGFPAASFYSAISSTPSLVHDVKSGNNGYGGYGYNAGTGWDYPTGWGSLDIAKL ------------------------------------------------------------ SAYIRSNGF --------- >CHIMERIC 48G7 FAB; SWP:GC1_HUMAN; PDB:1GAFH; QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPKQGLEWIGRIDPANVDTKY ---------------------1-------------------------------------- DPKFQDKATITADTSSKTTYLQLSSLTSEDTAVYYCASYYGIYWGQGTTLTVSSASTKGP -----------------------------------1------------------------ SVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLS --------------------2--------------------------------------- SVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC ----------------2-------------------- >GLUCOAMYLASE-471; SWP:P22832; PDB:1GAI; ATLDSWLSNEATVARTAILNNIGADGAWVSGADSGIVVASPSTDNPDYFYTWTRDSGLVI ------------------------------------------------------------ KTLVDLFRNGDTDLLSTIEHYISSQAIIQGVSNPSGDLSSGGLGEPKFNVDETAYTGSWG ------------------------------------------------------------ RPQRDGPALRATAMIGFGQWLLDNGYTSAATEIVWPLVRNDLSYVAQYWNQTGYDLWEEV ------------------------------------------------------------ NGSSFFTIAVQHRALVEGSAFATAVGSSCSWCDSQAPQILCYLQSFWTGSYILANFDSSR ----------------------------1--1--------2------------------- SGKDTNTLLGSIHTFDPEAGCDDSTFQPCSPRALANHKEVVDSFRSIYTLNDGLSDSEAV --------------------3-------3------------------------------- AVGRYPEDSYYNGNPWFLCTLAAAEQLYDALYQWDKQGSLEITDVSLDFFKALYSGAATG ------------------------------------------------------------ TYSSSSSTYSSIVSAVKTFADGFVSIVETHAASNGSLSEQFDKSDGDELSARDLTWSYAA ------------------------------------------------------------ LLTANNRRNSVVPPSWGETSASSVPGTCAATSASGTYSSVTVTSWPSIVATG ---------------------------2------------------------ >FERTILIZATION PROTEIN; SWP:Q25063; PDB:1GAKA; FDDVVVSRQEQSYVQRGMVNFLDEEMHKLVKRFRDMRWNLGPGFVFLLKKVNRERMMRYC -----------------------------------------------------------1 MDYARYSKKILQLKHLPVNKKTLTKMGRFVGYRNYGVIRELYADVFRDVQGFRGPKMTAA ------------------------------------------------------------ MRKYSSKDPGTFPCKNE -------------1--- >(1,3-1,4)-BETA-D-GLUCAN 4; SWP:P27051; PDB:1GBG; QTGGSFYEPFNNYNTGLWQKADGYSNGNMFNCTWRANNVSMTSLGEMRLSLTSPSYNKFD -------------------------------1---------------------------- CGENRSVQTYGYGLYEVNMKPAKNVGIVSSFFTYTGPTDGTPWDEIDIEFLGKDTTKVQF 1----------------------------------------------------------- NYYTNGVGNHEKIVNLGFDAANSYHTYAFDWQPNSIKWYVDGQLKHTATTQIPQTPGKIM ------------------------------------------------------------ MNLWNGAGVDEWLGSYNGVTPLYAHYNWVRYTKR ---------------------------------- >AUSTRALIAN BLACK SWAN EGG; SWP:P00717; PDB:1GBS; RTDCYGNVNRIDTTGASCKTAKPEGLSYCGVPASKTIAERDLKAMDRYKTIIKKVGEKLC ---1-------------2----------2------------------------------1 VEPAVIAGIISRESHAGKVLKNGWGDRGNGFGLMQVDKRSHKPQGTWNGEVHITQGTTIL ------------------------------------------------------------ TDFIKRIQKKFPSWTKDQQLKGGISAYNAGAGNVRSYARMDIGTTHDDYANDVVARAQYY ------------------------------------------------------------ KQHGY ----- >GLUCAN 1,4-ALPHA-MALTOTET; SWP:P13507; PDB:1GCYA; DQAGKSPNAVRYHGGDEIILQGFHWNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPW ------------------------------------------------------------ RDFSSWSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVVPNHMNRGYP ------------------------------------------------------------ DKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGDADLNTGHPQVYGMFRDEFTNLRS ----------------1---------1--------------------------------- QYGAGGFRFDFVRGYAPERVNSWMTDSADNSFCVGELWKGPSEYPNWDWRNTASWQQIIK --------------------------------2--------------------------- DWSDRAKCPVFDFALKERMQNGSIADWKHGLNGNPDPRWREVAVTFVDNHDTGYSPGQNG -------2---------------------------------------------------- GQHHWALQDGLIRQAYAYILTSPGTPVVYWDHMYDWGYGDFIRQLIQVRRAAGVRADSAI ------------------------------------------------------------ SFHSGYSGLVATVSGSQQTLVVALNSDLGNPGQVASGSFSEAVNASNGQVRVWRS ------------------------------------------------------- >LYSOZYME; SWP:P48816; PDB:1GD6A; KTFTRCGLVHELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQINDRYW -----1--------------------2--------------------------------- CSKGASPGKDCNVKCSDLLTDDITKAAKCAKKIYKRHRFDAWYGWKNHCQGSLPDISSC 3---------4---3-------------4-------------------2---------1 >Papaya proteinase 4 [Prec; SWP:P05994; PDB:1GECE; LPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCDLQS ---------------------1---------------------------------2---- YGCNRGYQSTSLQYVAQNGIHLRAKYPYIAKQQTCRANQVGGPKVKTNGVGRVQSNNEGS --1-------------------------------2------------------------- LLNAIAHQPVSVVVESAGRDFQNYKGGIFEGSCGTKVDHAVTAVGYGKSGGKGYILIKNS --------------------------------3--------------------------- WGPGWGENGYIRIRRASGNSPGVCGVYRSSYYPIKN -----------------------3------------ >GELATINASE A; SWP:P08253; PDB:1GEN; LGPVTPEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKI --------1--------------------------------------------------- DAVYEAPQEEKAVFFAGNEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKT ------------------------------------------------------------ YIFAGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKL ------------------------------------------------------------ ENQSLKSVKFGSIKSDWLGC -------------------1 >GLUTATHIONE REDUCTASE; SWP:Q83PT1; PDB:1GESA; KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREA ---------------------------------------1----1--------------- IHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKT ------------------------------------------------------------ LEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGFFALPALPERVAVVGAGYIGVEL ------------------------------------------------------------ GGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSL ------------------------------------------------------------ TLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVG ------------------------------------------------------------ DNTGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQ ------------------------------------------------------------ YGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVA ------------------------------------------------------------ LKMGATKKDFDNTVAIHPTAAEEFVTMR ---------------------------- >Sugar binding protein; SWP:Q7SIF1; PDB:1GGPB; CAAATVRIAGRDGFCADVNGEGQNGAAIILKKCAENDNQLWTLKREATIRSNGGCLTTAA --------------1-----------------1---------------------2----- AEQAKAGIYDCTQATAELSAWEIADNGTIINPASSLVLSSGAANSLLDLGVQTNSYASAQ ----------2------------------------------------------------- GWRTGNETSASVTQISGSAQLCMQAG -------------------------- >THIOREDOXIN-LIKE PROTEIN; SWP:O43396; PDB:1GH2A; VGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDV --------------------------------1--1------------------------ HQCQGTAATNNISATPTFQFFRNKVRIDQYQGADAVGLEEKIKQHLE ----------------------------------------------- >ANTI-ANTI-IDIOTYPE GH1002; SWP:NA; PDB:1GHFH; VQLQQSGPELKKPGETVKISCKLWYTFTDYGMNWVKQAPGKGLKWMGWIQTNTEEPTYGA --------------------1--------------------------------------- EFKGRFAFSLETSAFTAYKQINNLKNEDMATYFCARVEAGFDYWAQGTTLTVSSAKTTPP ---------------------------------1-------------------------- SVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSS --------------------2--------------------------------------- SVTVPSSPRPSETVTCNVAHPASSTKVDKKII ---------------2---------------- >ANTI-ANTI-IDIOTYPE GH1002; SWP:NA; PDB:1GHFL; DIQMTQTTSSLSASLGDRVTISCRESQDISNSLNWYQQKPDGTVKLLIYYTSRLHSGVPS ----------------------1------------------------------------- RFSGSGTGTDYSLTISNLEQEDFATYFCQQGNTLPYTFGGGTKLEIKRADAAQTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNR -------------2----------------- >PHEASANT EGG WHITE LYSOZY; SWP:P00702; PDB:1GHLA; GKVYGRCELAAAMKRMGLDNYRGYSLGNWVCAAKFESNFNTGATNRNTDGSTDYGILQIN ------1-----------------------2----------------------------- SRWWCNDGRTPGSKNLCHIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRKHCKGTD ----3-----------4---3-------------4--------------------2---- VNVWIRGCRL -------1-- >IGG1-KAPPA HC19 FAB (HEAV; SWP:NA; PDB:1GIGH; QVQLKESGPGLVAPSQSLSITCTVSGFLLISNGVHWVRQPPGKGLEWLGVIWAGGNTNYN ---------------------1-------------------------------------- SALMSRVSISKDNSKSQVFLKMKSLQTDDTAMYYCARDFYDYDVFYYAMDYWGQGTSVTV ----------------------------------1------------------------- SSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQ ----------------------------2------------------------------- SDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP -----------------------2----------------- >RIBULOSE BISPHOSPHATE CAR; SWP:P00877; PDB:1GK8A; TKAGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTW ------------------------------------------------------------ TTVWTDGLTSLDRYKGRCYDIEPVPGEDNQYIAYVAYIDLFEEGSVTNMFTSIVGNVFGF ------------------------------------------------------------ KALRALRLEDLRIPPAYVKTFVGPHGIQVERDKLNKYGRGLLGCTIKPKLGLSAKNYGRA ------------------------------------------------------------ VYECLRGGLDFTDDENVNSQPFMRWRDRFLFVAEAIYKAQAETGEVKGHYLNATAGTCEE ------------------------------------------------------------ MMKRAVAKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRNHGIH ------------------------------------------------------------ FRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDWSM ------------------------------------------------------------ PGVMPVASGGIHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQAR ------------------------------------------------------------ NEGRDLAREGGDVIRSACKWSPELAAACEVWKEIKFEFDTIDKL -----------------1---------1---------------- >Crustacyanin-A2 subunit; SWP:P80007; PDB:1GKAB; DGIPSFVTAGKCASVANQDNFDLRRYAGRWYQTHIIENAYQPVTRCIHSNYEYSTNDYGF -----------1---------------------------------2-------------- KVTTAGFNPNDEYLKIDFKVYPTKEFPAAHMLIDAPSVFAAPYEVIETDYETYSCVYSCI ----------------------------------------------------------1- TTDNYKSEFAFVFSRTPQTSGPAVEKTAAVFNKNGVEFSKFVPVSHTAECVYRA -------------------------------------------------2---- >COMPLEMENT RECEPTOR TYPE ; SWP:P17927; PDB:1GKGA; EAEAKSCKTPPDPVNGMVHVITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTK ------1--------------------------2-------------1------------ PPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTS ---2----3----------------------------4-------------------3-- NDDQVGIWSGPAPQCI --------------4- >COMPLEMENT RECEPTOR TYPE ; SWP:P17927; PDB:1GKNA; EAEAHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEYYGRPFSITCLDNLVWSSPKD -----1-----------------------------2------------1----------- VCKRKSCKTPPDPVNGMVHVITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTK -2----3--------------------------4-------------3------------ PPICQRIP ---4---- >Reverse gyrase; SWP:O29238; PDB:1GKUB; AAAAAAAAAAAAAAAAAAASLCLFPEDFLLKEFVEFFRKCVGEPRAIQKMWAKRILRKES ---------------------1-------------------------------------- FAATAPTGVGKTSFGLAMSLFLALKGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENL ------------------------------------------------------------ IGYYHGRIPKREKENFMQNLRNFKIVITTTQFLSKHYRELGHFDFIFVDDVDAILKASKN ------------------------------------------------------------ VDKLLHLLGFHYDLKTKSWVGEARGCLMVSTATAKKGKKAELFRQLLNFDIGSSRITVRN ------------------------------------------------------------ VEDVAVNDESISTLSSILEKLGTGGIIYARTGEEAEEIYESLKNKFRIGIVTATKKGDYE ------------------------------------------------------------ KFVEGEIDHLIGTAHRGLDLPERIRFAVFVGCPSFRVTIEDIDSLSPQMVKLLAYLYRNV ------------------------------------------------------------ DEIERLLPAVERHIDEVREILKKVMGKERPQAKDVVVREGEVIFPDLRTYIQGSGRTSRL ------------------------------------------------------------ FAGGLTKGASFLLEDDSELLSAFIERAKLYDIEFKSIDEVDFEKLSRELDESRDRYRRRQ ------------------------------------------------------------ EFDLIKPALFIVESPTKARQISRFFGKPSVKVLDGAVVYEIPMQKYVLMVTASIGHVVDL ------------------------------------------------------------ ITNRGFHGVLVNGRFVPVYASIKDNSRSRIEALRKLAHDAEFVIVGTDPDTEGEKIAWDL ------------------------------------------------------------ KNLLSGCGAVKRAEFHEVTRRAILEALESLRDVDENLVKAQVVRRIEDRWIGFVLSQKLW ------1----------------------------------------------------- ERFNNRNLSAGRAQTLVLGWIIDRFQESRERRKIAIVRDFDLVLEHDEEEFDLTIKLVEE ------------------------------------------------------------ REELRTPLPPYTTETMLSDANRILKFSVKQTMQIAQELFENGLITYHRTDSTRVSDVGQR ------------------------------------------------------------ IAKEYLGDDFVGREWGESGAHECIRPTRPLTRDDVQRLIQEGVLVVEGLRWEHFALYDLI ------------------------------------------------------------ FRRFMASQCRPFKVVVKKYSIEFDGKTAEEERIVRAEGRAYELYRAVWVKNELPTGTFRV ------------------------------------------------------------ KAEVKSVPKVLPFTQSEIIQMMKERGIGRPSTYATIVDRLFMRNYVVEKYGRMIPTKLGI ------------------------------------------------------------ DVFRFLVRRYAKFVSEDRTRDLESRMDAIERGELDYLKALEDMYAEIKSID --------------------------------------------------- >Protease inhibitors [Prec; SWP:P80060; PDB:1GL0I; KCTPGQVKQQDCNTCTCTPTGVWGCTLMGCQP -1---------2--3-1-------3----2-- >Protease inhibitors [Prec; SWP:P80060; PDB:1GL1I; ISCEPGKTFKDKCNTCRCGADGKSAACTLKACPN --1---------2--3-1--------3----2-- >Basement membrane-specifi; SWP:Q05793; PDB:1GL4B; PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFNGILTIRN -----------------------1------------------------------------ VQPSDAGTYVCTGSNMFAMDQGTATLHVQ ----------1------------------ >RECG; SWP:Q9WY48; PDB:1GM5A; FTSSLFLWGEALPTLLEEFLNEVEKMLKNQVNTRRIHQLLKELDDPLLENKDLEEKLQAF ------------------------------------------------------------ LDYVKEIPNLPEARKRYRIQKSLEMIEKLRSWFLIDYLECSGEEVDLSTDIQYAKGVGPN ---------------------------------------1-------------------- RKKKLKKLGIETLRDLLEFFPRDYEDRRKIFKLNDLLPGEKVTTQGKIVSVETKKFQNMN ------------------------------------------------------------ ILTAVLSDGLVHVPLKWFNQDYLQTYLKQLTGKEVFVTGTVKSNAYTGQYEIHNAEVTPK ------------------------------------------------------------ EGEYVRRILPIYRLTSGISQKQMRKIFEENIPSLCCSLKETLPERILEKRKLLGVKDAYY -----------------------------------1------------------------ GMHFPKTFYHLEKARERLAYEELFVLQLAFQKIRKEREKHGGIPKKIEGKLAEEFIKSLP ------------------------------------------------------------ FKLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPT ------------------------------------------------------------ SILAIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQEDV ------------------------------------------------------------ HFKNLGLVIIDEQHRFEALMNKGKMVDTLVMSATPIPRSMALAFYGDLDVTVIDEMPPGR ------------------------------------------------------------ KEVQTMLVPMDRVNEVYEFVRQEVMRGGQAFIVYPLIKSAVEMYEYLSKEVFKLGLMHGR ------------------------------------------------------------ LSQEEKDRVMLEFAEGRYDILVSTTVIEVGIDVPRANVMVIENPERFGLAQLHQLRGRVG ------------------------------------------------------------ RGGQEAYCFLVVGDVGEEAMERLRFFTLNTDGFKIAEYDLKTRGPGEKQHGLSGFKVADL ------------------------------------------------------------ YRDLKLLEW --------- >SALIVARY LIPOCALIN; SWP:P81608; PDB:1GM6A; VVTSNFDASKIAGEWYSILLASDAKENIEENGSMRVFVEHIRVLDNSSLAFKFQRKVNGE ------------------------------------------------------------ CTDFYAVCDKVGDGVYTVAYYGENKFRLLEVNYSDYVILHLVDVNGDKTFQLMEFYGRKP 1----------------------------------------------------------- DVEPKLKDKFVEICQQYGIIKENIIDLTKIDRCFQLRG --------------------------------1----- >CCT-GAMMA; SWP:P80318; PDB:1GMLA; DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKDFTRILQMEEEYIHQLCEDIIQ ------------------------------------------------------------ LKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVG ------------------------------------------------------------ TGAGLLEIKKIGDEYFTFITDCKDPKACTILLRG ---------------------1-----1------ >CATHEPSIN B; SWP:P07858; PDB:1GMYA; KLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDL --------------1-----------2----------------1---------------- LTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEHHVNGSRPPC --34---4---2----------------------------5-------6----------6 TGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSD --------3---5----------------------------------------------- FLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDH ------------------------------------------------------------ CGIESEVVAGIPRT -------------- >PHOSPHOLIPASE A2; SWP:NA; PDB:1GMZA; DLWQFGKMILKETGKLPFPYYVTYGCYCGVGGRGGPKDATDRCCFVHDCCYGKLTSCKPK -------------------------1-2--------------32----45------6--- TDRYSYSRKDGTIVCGEDPCRKEICECDKAAAVCFRENLDTYNKKYMSYLKSLCKKDDC --------------7----6----7-5------3-------------------1----4 >XYLANASE 10C; SWP:Q59675; PDB:1GNYA; GNVVIEVDMANGWRGNASGSTSHSGITYSADGVTFAALGDGVGAVFDIARPTTLEDAVIA ------------------------------------------------------------ MVVNVSAEFKASEANLQIFAQLKEDWSKGEWDCLAGSSELTADTDLTLTCTIDEDDDKFN --------------------------------1----------------1---------- QTARDVQVGIQAKGTPAGTITIKSVTITLAQEA --------------------------------- >PHOSPHOLIPASE A2; SWP:P81165; PDB:1GODA; SMYQLWKMILQETGKNAVPSYGLYGCNCGVGSRGKPKDATDRCCFVHKCCYKKLTDCSPK -------------------------1-2--------------32----45------6--- TDSYSYSWKDKTIVCGDNNPCLQEMCECDKAVAICLRENLDTYNKNYKIYPKPLCKKADA --------------7-----6----7-5------3-------------------1----- C 4 >CHITINASE B; SWP:Q54276; PDB:1GOIA; TRKAVIGYYFIPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAW ------------------------------------------------------------ DPATNDAKARDVVNRLTALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAK ------------------------------------------------------------ FAQSCVRIMKDYGFDGVNIDWEYPQAAEVDGFIAALQEIRTLLNQQTITDGRQALPYQLT ------------------------------------------------------------ IAGAGGAFFLSRYYSKLAQIVAPLDYINLMTYDLAGPWEKVTNHQAALFGDAAGPTFYNA ------------------------------------------------------------ LREANLGWSWEELTRAFPSPFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGG ------------------------------------------------------------ NGGQYSSHSTPGEDPYPSTDYWLVGCEECVRDKDPRIASYRQLEQMLQGNYGYQRLWNDK -------------------------1--1------------------------------- TKTPYLYHAQNGLFVTYDDAESFKYKAKYIKQQQLGGVMFWHLGQDNRNGDLLAALDRYF ------------------------------------------------------------ NAADYDDSQLDMGTGLRYTGVGPGNLPIMTAPAYVPGTTYAQGALVSYQGYVWQTKWGYI ------------------------------------------------------------ TSAPGSDSAWLKVGRV ---------------- >CATION-INDEPENDENT MANNOS; SWP:P11717; PDB:1GP0A; DCQVTNPSTGHLFDLSSLSGRAGFTAAYSEKGLVYMSICGENENCPPGVGACFGQTRISV -1------------------------------------1-----2------2-------- GKANKRLRYVDQVLQLVYKDGSPCPSKSGLSYKSVISFVCRPEAGPTNRPMLISLDKQTC -----------------------3---------------4-------------------3 TLFFSWHTPLACE -----------4- >PHOSPHOLIPASE A2; SWP:P80966; PDB:1GP7A; HLIQFGNMIQCTVPGFLSWIKYADYGCYCGAGGSGTPVDKLDRCCQVHDNCYTQAQKLPA ----------1---------------2-3--------------43-----5--------- CSSIMDSPYVKIYSYDCSERTVTCKADNDECAAFICNCDRVAAHCFAASPYNNNNYNIDT 6---------------1------7------6----7-5------4--------------- TTRC ---2 >GLUCOSE OXIDASE; SWP:P81156; PDB:1GPEA; YLPAQQIDVQSSLLSDPSKVAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE ------------------------------------------------------------ SNDGAIIEDPNAYGQIFGTTVDQNYLTVPLINNRTNNIKAGKGLGGSTLINGDSWTRPDK ------------------------------------------------------------ VQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGAR -----------------------------------------------1------------ DNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPN -----------------------------1------------------------------ YQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPL ------------------------------------------------------------ ILEYSGIGLKSVLDQANVTQLLDLPVGINMQDQTTTTVSSRASSAGAGQGQAVFFANFTE ------------------------------------------------------------ TFGDYAPQARDLLNTKLDQWAEETVARGGFHNVTALKVQYENYRNWLLDEDVAFAELFMD ------------------------------------------------------------ TEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTS ------------------------------------------------------------ QGAMKEYFAGETLPGYNLVQNATLSQWSDYVLQNFRPNWHAVSSCSMMSRELGGVVDATA ------------------------------------------------------------ KVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAILDDYAKSA ----------------------------------------------- >EXOGLUCANASE I; SWP:Q09431; PDB:1GPIA; QAGTNTAENHPQLQSQQCTTSGGCKPLSTKVVLDSNWRWVHSTSGYTNCYTGNEWDTSLC -----------------1-----1------------------------2----------3 PDGKTCAANCALDGADYSGTYGITSTGTALTLKFVTGSNVGSRVYLMADDTHYQLLKLLN -----3---2-------------------------------------------------- QEFTFDVDMSNLPCGLNGALYLSAMDADGGMSKYPGNKAGAKYGTGYCDSQCPKDIKFIN -------------4---------------------------------5---6-------- GEANVGNWTETGSNTGTGSYGTCCSEMDIWEANNDAAAFTPHPCTTTGQTRCSGDDCARN ----------------------65-------------------7-------8----8--- TGLCDGDGCDFNSFRMGDKTFLGKGMTVDTSKPFTVVTQFLTNDNTSTGTLSEIRRIYIQ ---7----9--------------------------------------------------- NGKVIQNSVANIPGVDPVNSITDNFCAQQKTAFGDTNWFAQKGGLKQMGEALGNGMVLAL -------------------------9---------------------------------- SIWDDHAANMLWLDSDYPTDKDPSAPGVARGTCATTSGVPSDVESQVPNSQVVFSNIKFG --------------------------------4--------------------------- DIGSTFSGTS ---------- >ANTIBODY M41; SWP:NA; PDB:1GPOH; EVKLQESGPSLVKPSQTLSLTCSVTGDSITSDFWSWIRQFPGNRLEYMGFVQYSGETAYN ---------------------1-------------------------------------- PSLKSRISITRDTSKNQYYLDLNSVTTEDTAVYYCANWHGDYWGQGTTVTVSSAKTTPPS ----------------------------------1------------------------- VYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSS -------------------2---------------------------------------- VTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD --------------2------------------- >GAMMA-1-P THIONIN; SWP:P20158; PDB:1GPS; KICRRRSAGFKGPCMSNKNCAQVCQQEGWGGGNCDGPFRRCKCIRQC --1----------2-----3---4---------2------3-4---1 >GAMMA-1-H THIONIN; SWP:P20230; PDB:1GPT; RICRRRSAGFKGPCVSNKNCAQVCMQEGWGGGNCDGPLRRCKCMRRC --1----------2-----3---4---------2------3-4---1 >EOSINOPHIL-DERIVED NEUROT; SWP:P10153; PDB:1GQVA; MKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFLLTTFANVVNVCGNPN -----------------------1-------------------------------2---- MTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRD --3--------3-----------1---------------------------2-------- PPQYPVVPVHLDRII --------------- >SPORE COAT PROTEIN A; SWP:P07788; PDB:1GSKA; TLEKFVDALPIPDTLKPVQQSKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIE ------------------------------------------------------------ VKRNENVYVKWMNNLPSTHFLPIDHTIHEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFE ------------------------------------------------------------ QTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDE ------------------------------------------------------------ YDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWPYLEVEPR ----------------------------------------1------------------- KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTA ------------------------------------------------------------ YEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQN -------------1---------------------------------------------- IRTLKLAGTQDEYGRPVLLLNNKRWHDPVTETPKVGTTEIWSIINPTRGTHPIHLHLVSF ------------------------------------------------------------ RVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRY ------------------------------------------------------------ VWHCHILEHEDYDMMRPMDITD ---------------------- >MUCOSAL ADDRESSIN CELL AD; SWP:Q13477; PDB:1GSMA; VKPLQVEPPEPVVAVALGASRQLTCRLACADRGASVQWRGLDTSLGAVQSDTGRSVLTVR ------------------------1---2------------------------------- NASLSAAGTRVCVGSCGGRTFQHTVQLLVYAFPNQLTVSPAALVPGDPEVACTAHKVTPV -----------1---2-----------------------------------3-------- DPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPAL ------------------------------------------------------------ YCQATMRLPGLELSHRQAIPVLIEGR -3------------------------ >CYTOCHROME C''; SWP:Q9RQB9; PDB:1GU2A; DVTNAEKLVYKYTNIAHSANPMYEAPSITDGKIFFNRKFKTPSGKEAACASCHTNNPANV ------------------------------------------------------------ GKNIVTGKEIPPLAPRVNTKRFTDIDKVEDEFTKHCNDILGADCSPSEKANFIAYLLTET -----------------------------------1-------1---------------- KPTK ---- >ENDOGLUCANASE C; SWP:P14090; PDB:1GU3A; TFDDGPEGWVAYGTDGPLDTSTGALCVAVPAGSAQYGVGVVLNGVAIEEGTTYTLRYTAT -------------------------1---------------------------------- ASTDVTVRALVGQNGAPYGTVLDTSPALTSEPRQVTETFTASATYPATPAADDPEGQIAF ------------------------------------------------------------ QLGGFSADAWTLCLDDVALDSE ------------1--------- >ANGIOGENIN; SWP:P03950; PDB:1GV7A; DNSRYTHFLTQHYDAKPQGRDDRYCESIMRRRGLTSPCKDINTFIHGNKRSIKAICSQKN ------------------------1------------2-----------------3---- VACKNGQTNCYISKSSFQVTTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDQSI --4------4-----------1----------2--------------3------------ FR -- >P58/ERGIC-53; SWP:Q62902; PDB:1GV9A; PHRRFEYKYSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKAAF ------------------------------------------------------------ ENWEVEVTFRVTGRGRIGADGLAIWYTENQGLDGPVFGSADMWNGVGIFFDSFDNNPAIV ------------------------------------------------------------ VVGNNGQINYDHQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGFTPDKND -----------------------1------------------------------------ YEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTE ---1--------------------------------------- >KALLIKREIN; SWP:Q8WMN9; PDB:1GVZA; IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCMSDDYQIWLGRHNLSKDE -------------------------1---------------1------------------ DTAQFHQVSDSFLDPQFDLSLLKKKYLRP ----------------------------- >PEROXIDASE C1A; SWP:P00433; PDB:1GWUA; MQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTT -----------1--------------------------------2----2---------- SFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV -------------------------------1-----3---------------------- PLGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF ---------------------------------------------------------4-- IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE -----------------------------4------------------------------ QKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRL ------------------------------------------------------------ NCRVVNS -3----- >HYDROXYNITRILE LYASE; SWP:Q8W4X3; PDB:1GXSA; QQEDDRILGLPGQPNGVAFGMYGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGG ------------------------------------------------------------ PGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAESPAGVGFSYSNTSSDLS ------------------------------------------------------------ MGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGESGHFIPQLSQVVYRNRNNSPFINFQG ------------------------------------------------------------ LLVSSGLTNDHEDMIGMFESWWHHGLISDETRDSGLKVCPGTSFMHPTPECTEVWNKALA --------------------------------------1-----------1--------- EQGNINPYTIYTPTCDREPSPYQRRFW --------------------------- >T-CELL ECTO-ADP-RIBOSYLTR; SWP:P20974; PDB:1GXYA; PLMLDTAPNAFDDQYEGCVNKMEEKAPLLLQEDFNMNAKLKVAWEEAKKRWNNIKPSRSY -----------------1------------------------------------------ PKGFNDFHGTALVAYTGSIAVDFNRAVREFKENPGQFHYKAFHYYLTRALQLLSNGDCHS ---------------------------------------------------------2-- VYRGTKTRFHYTGAGSVRFGQFTSSSLSKKVAQSQEFFSDHGTLFIIKTCLGVYIKEFSF -------------------------------------------------2---------- RPDQEEVLIPGYEVYQKVRTQGYNEIFLDSPKRKKSNYNCLYS ---------------------------------------1--- >LACCASE 2; SWP:Q12718; PDB:1GYCA; AIGPAASLVVANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKS ------------------------------------------------------------ TSIHWHGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGL ------------------------1-------------------------------2--- RGPFVVYDPKDPHASRYDVDNESTVITLTDWYHTAARLGPRFPLGADATLINGLGRSAST ------------------------------------------------------------ PTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFA ------------------------2----------------------------------- AQRYSFVLNANQTVGNYWIRANPNFGTVGFAGGINSAILRYQGAPVAEPTTTQTTSVIPL ------------------------------------------------------------ IETNLHPLARMPVPGSPTPGGVDKALNLAFNFNGTNFFINNASFTPPTVPVLLQILSGAQ ------------------------------------------------------------ TAQDLLPAGSVYPLPAHSTIEITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDP ------------------------------------------------------------ IFRDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVFAEDVADVKAANPV ------------------------------------------------------------ PKAWSDLCPIYDGLSEANQ -------1----------- >ARABINAN ENDO-1,5-ALPHA-L; SWP:P95470; PDB:1GYHA; GAKQVDVHDPVMTREGDTWYLFSTGPGITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSF ------------------------------------------------------------ DGHLWAPDIYQHKGLFYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDKGIVIESVP ------------------------------------------------------------ QRDLWNAIAPAIIADDHGQVWMSFGSFWGGLKLFKLNDDLTRPAEPQEWHSIAKLERSVL ------------------------------------------------------------ MDDSQAGSAQIEAPFILRKGDYYYLFASWGLCCRKGDSTYHLVVGRSKQVTGPYLDKTGR -------------------------------11--------------------------- DMNQGGGSLLIKGNKRWVGLGHNSAYTWDGKDYLVLHAYEAADNYLQKLKILNLHWDGEG ------------------------------------------------------------ WPQVDEKELDSYISQRLK ------------------ >OVOCLEIDIN; SWP:Q9PRS8; PDB:1GZ2A; GCGPGWVPTPGGCLGFFSRELSWSRAESFCRRWGPGSHLAAVRSAAELRLLAELLNARGG -1----------1----------------2------------------------------ DGSGEGADGRVWIGLHRPAGSRSWRWSDGTAPRFASWHRTAKARRGGRCAALRDEEAFTS ------------------------------------------------3----------- WAARPCTERNAFVCKAAA -----3-------2---- >LIPASE 2; SWP:P32946; PDB:1GZ7A; APTATLANGDTITGLNAIVNEKFLGIPFAEPPVGTLRFKPPVPYSASLNGQQFTSYGPSC -----------------------------------------------------------1 MQMNPMGSFEDTLPKNALDLVLQSKIFQVVLPNDEDCLTINVIRPPGTRASAGLPVMLWI ------------------------------------1----------------------- FGGGFELGGSSLFPGDQMVAKSVLMGKPVIHVSMNYRVASWGFLAGPDIQNEGSGNAGLH ------------------------------------------------------------ DQRLAMQWVADNIAGFGGDPSKVTIYGESAGSMSTFVHLVWNDGDNTYNGKPLFRAAIMQ ------------------------------------------------------------ SGCMVPSDPVDGTYGTEIYNQVVASAGCGSASDKLACLRGLSQDTLYQATSDTPGVLAYP ---------------------------2--------2----------------------- SLRLSYLPRPDGTFITDDMYALVRDGKYAHVPVIIGDQNDEGTLFGLSSLNVTTDAQARA ------------------------------------------------------------ YFKQSFIHASDAEIDTLMAAYTSDITQGSPFDTGIFNAITPQFKRISALLGDLAFTLARR ------------------------------------------------------------ YFLNYYQGGTKYSFLSKQLSGLPVLGTFHGNDIIWQDYLVGSGSVIYNNAFIAFANDLDP ------------------------------------------------------------ NKAGLWTNWPTYTSSSQSGNNLMQINGLGLYTGKDNFRPDAYSALFSNPPSFFV ------------------------------------------------------ >FORMATE DEHYDROGENASE (LA; SWP:Q934F5; PDB:1H0HA; ATMALKTVDAKQTTSVCCYCSVGCGLIVHTDKKTNRAINVEGDPDHPINEGSLCAKGAST ------------------------------------------------------------ WQLAENERRPANPLYRAPGSDQWEEKSWDWMLDTIAERVAKTREATFVTKNAKGQVVNRC ------------------------------------------------------------ DGIASVGSAAMDNEECWIYQAWLRSLGLFYIEHQARIHSATVAALAESYGRGAMTNHWID ------------------------------------------------------------ LKNSDVILMMGSNPAENHPISFKWVMRAKDKGATLIHVDPRYTRTSTKCDLYAPLRSGSD ------------------------------------------------------------ IAFLNGMTKYILEKELYFKDYVVNYTNASFIVGEGFAFEEGLFAGYNKETRKYDKSKWGF ------------------------------------------------------------ ERDENGNPKRDETLKHPRCVFQIMKKHYERYDLDKISAICGTPKELILKVYDAYCATGKP ------------------------------------------------------------ DKAGTIMYAMGWTQHTVGVQNIRAMSINQLLLGNIGVAGGGVNALRGEANVQGSTDHGLL ------------------------------------------------------------ MHIYPGYLGTARASIPTYEEYTKKFTPVSKDPQSANWWSNFPKYSASYIKSMWPDADLNE ------------------------------------------------------------ AYGYLPKGEDGKDYSWLTLFDDMFQGKIKGFFAWGQNPACSGANSNKTREALTKLDWMVN ------------------------------------------------------------ VNIFDNETGSFWRGPDMDPKKIKTEVFFLPCAVAIEKEGSISNSGRWMQWRYVGPEPRKN ------------------------------------------------------------ AIPDGDLIVELAKRVQKLLAKTPGKLAAPVTKLKTDYWVNDHGHFDPHKIAKLINGFALK ------------------------------------------------------------ DFKVGDVEYKAGQQIATFGHLQADGSTTSGCWIYTGSYTEKGNMAARRDKTQTDMQAKIG ------------------------------------------------------------ LYPGWTWAWPVNRRIIYNRASVDLNGKPYAPEKAVVEWNAAEKKWVGDVPDGPWPPQADK ------------------------------------------------------------ EKGKRAFIMKPEGYAYLYGPGREDGPLPEYYEPMECPVIEHPFSKTLHNPTALHFATEEK -----------------------------------1------------------------ AVCDPRYPFICSTYRVTEHWQTGLMTRNTPWLLEAEPQMFCEMSEELATLRGIKNGDKVI --1--------------------------------------------------------- LESVRGKLWAKAIITKRIKPFAIQGQQVHMVGIPWHYGWSFPKNGGDAANILTPSVGNPN ------------------------------------------------------------ TGIPETKAFMVNVTKA ---------------- >CARDIOTOXIN-3; SWP:P01444; PDB:1H0JA; LKCNKLVPLFYKTCPAGKNLCYKMFMVATPKVPVKRGCIDVCPKSSLLVKYVCCNTDRCN --1----------2------1----------------2---3----------34----4- >SERINE PROTEASE INHIBITOR; SWP:Q9NQ38; PDB:1H0ZA; ESGKATSYAELCNEYRKLVRNGKLACTRENDPIQGPDGKVHGNTCSMCEVFFQAEEEEKK -----------1-------------2------------------2--1------------ KKEGESRN -------- >ENDO-1,4-BETA-XYLANASE; SWP:Q8RJN8; PDB:1H12A; AFNNNPSSVGAYSSGTYRNLAQEMGKTNIQQKVNSTFDNMFGYNNTQQLYYPYTENGVYK ------------------------------------------------------------ AHYIKAINPDEGDDIRTEGQSWGMTAAVMLNKQEEFDNLWRFAKAYQKNPDNHPDAKKQG ------------------------------------------------------------ VYAWKLKLNQNGFVYKVDEGPAPDGEEYFAFALLNASARWGNSGEFNYYNDAITMLNTIK ------------------------------------------------------------ NKLMENQIIRFSPYIDNLTDPSYHIPAFYDYFANNVTNQADKNYWRQVATKSRTLLKNHF ------------------------------------------------------------ TKVSGSPHWNLPTFLSRLDGSPVIGYIFNGQANPGQWYEFDAWRVIMNVGLDAHLMGAQA ------------------------------------------------------------ WHKSAVNKALGFLSYAKTNNSKNCYEQVYSYGGAQNRGCAGEGQKAANAVALLASTNAGQ -----------------------1--------------1--------------------- ANEFFNEFWSLSQPTGDYRYYNGSLYMLAMLHVSGNFKFYNNTF -------------------------------------------- >ENDO TYPE CELLULASE ENGI; SWP:Q8TG26; PDB:1H1NA; AKVFQWFGSNESGAEFGSQNLPGVEGKDYIWPDPNTIDTLISKGMNIFRVPFMMERLVPN ------------------------------------------------------------ SMTGSPDPNYLADLIATVNAITQKGAYAVVDPHNYGRYYNSIISSPSDFETFWKTVASQF ------------------------------------------------------------ ASNPLVIFDTDNEYHDMDQTLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTWTNVN ------------------------------------------------------------ DNMKSLTDPSDKIIYEMHQYLDSDGSGTSATCVSSTIGQERITSATQWLRANGKKGIIGE -------------------------------1---------------------------- FAGGADNVCETAITGMLDYMAQNTDVWTGAIWWAAGPWWGDYIFSMEPDNGIAYQQILPI --------1--------------------------------------------------- LTPYL ----- >METALLOCARBOXYPEPTIDASE I; SWP:P01075; PDB:1H20A; EQHADPICNKPCKTHDDCSGAWFCQACWNSARTCGPYVG -------1---2-----3-----1--2------3----- >ALCOHOL DEHYDROGENASE; SWP:Q9Y9P9; PDB:1H2BA; KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT ------------------------------------------------------------ LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGG --------------------------------------1-------1------------- FAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVG ------------------------------------------------------------ GLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVN ------------------------------------------------------------ VAMDFVGSQATVDYTPYLLGRMGRLIIVGYGGELRFPTIRVISSEVSFEGSLVGNYVELH ------------------------------------------------------------ ELVTLALQGKVRVEVDIHKLDEINDVLERLEKGEVLGRAVLIP ------------------------------------------- >GROWTH-ARREST-SPECIFIC PR; SWP:Q14393; PDB:1H30A; HCDGRGGLKLSQDMDTCEDILPCVPFSVAKSVKSLYLGRPVIRLRFKRLQPTRLVAEFDF -1--------------1-----2------------------------------------- RTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTSSGPVINHGMWQTISVE ------------------------------------------------------------ ELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCM ----------------------------------------------------------3- RSWNWLTVKVNTRMQCFSVTERGSFYPGSGFAFYSLDYMRSTWEVEVVAHIRPAADTGVL ---------------3-------------------------------------------- FALWAPDLRAVPLSVALVDYHKKQLVVLAVEHTALALMEIKVCDGQEHVVTVSLRDGEAT ------------------------------------------2----------------- LEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSAPVTAFYRGCMTLE -------------------------------------------------------4---- VNRRLLDLDEAAYKHSDITAHSCPPVEPAAA ----------------------4-------- >BOWMAN-BIRK TYPE PROTEINA; SWP:P01056; PDB:1H34A; KPCCDHCSCTKSIPPQCRCTDLRLDSCHSACKSCICTLSIPAQCVCDDIDDFCYEPC --12--3-4-------4-2-------5---6--5-7-------7-6------3---1 >LACTOFERRIN; SWP:P02788; PDB:1H45A; RRRSVQWCAVSQPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDG -------1---------2----------------2--------1---------------- GFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQLNELQGLKSCHTGLRR -----------------------------------------------------3------ TAGWNVPIGTLRPFLDWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGTGENKC -----------------------------------4------------5--4-------5 AFSSQEPYFSYSGAFKCLRDGAGDVAFIGESTVFEDLSDEAERDEYELLCPDNTRKPVDK ----------------3--------------------------------6---------- FKDCHLARVPSHAVVARSVNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLFK ---6-------------------------------------------------------- DSAIGFSRVPPRIDSGLYLGSG ---------------------- >GLUCAN 1,3-BETA-GLUCOSIDA; SWP:P23776; PDB:1H4PA; YYDYDHGSLGEPIRGVNIGGWLLLEPYITPSLFEAFRTNDDNDEGIPVDEYHFCQYLGKD ------------------------------------------------------------ LAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAI ------------------------------------------------------------ GWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTINVLNYILKKYSAEEY ------------------------------------------------------------ LDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDF ------------------------------------------------------------ MTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGVLNESHWIVCGEFAAALT ------------------------------------1----------------------- DCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYWSDERKENTRRYVEAQLDAF -2-----------------------------2---------------------------- EMRGGWIIWCYKTESSLEWDAQRLMFNGLFPQPLTDRKYPNQCGTISN ------------------------------------------1----- >Insulin-like growth facto; SWP:P24593; PDB:1H59B; SALAEGQSCGVYTERCAQGLRCLPRQDEEKPLHALLHGRGVCLNE --------1------2-----1-------------------2--- >MURINE T CELL RECEPTOR (T; SWP:A2N3K1; PDB:1H5BA; GDQVEQSPSALSLHEGTDSALRCNFTTTMRSVQWFRQNSRGSLISLFYLASGTKENGRLK ----------------------1------------------------------------- SAFDSERARYSTLHIRDAQLEDSGTYFCAAEASSGSWQLIFGSGTQLTVMPVT ---------------------------1------------------------- >MYOTOXIN; SWP:P01475; PDB:1H5OA; YKQCHKKGGHCFPKEKICLPPSSDFGKMDCRWRWKCCKKGSG ---1------2------3-----------2-----13----- >GREEN FLUORESCENT PROTEIN; SWP:P42212; PDB:1H6RA; SKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFIVTTGKLPVPWPTLV ------------------------------------------------------------ TTFLQCFARYPDHMKRHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIE ------------------------------------------------------------ LKGIDFKEDGNILGHKLEYNYNSHCVYIVADKQKNGIKVNFKIRHNIEDGSVQLADHYQQ ------------------------1----------------------------------- NTPIGDGPVLLPDNHYLCYQSALSKDPNEKRDHMVLLEFVTAAGITH -----------------1----------------------------- >THIOREDOXIN REDUCTASE; SWP:O89049; PDB:1H6VA; SYDFDLIIIGGGSGGLAAAKEAAKFDKKVMVLDFVTPTPLGTNWGLGGTCVNVGCIPKKL -------------------------------------------------1----1----- MHQAALLGQALKDSRNYGWKLEDTVKHDWEKMTESVQNHIGSLNWGYRVALREKKVVYEN ------------------------------------------------------------ AYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYC ------------------------------------------------------------ PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIR ------------------------------------------------------------ QFVPTKIEQIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKI ------------------------------------------------------------ NEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGGSTVKCDYDN ------------------------------------------------------------ VPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWPLEWTVPSRDNNKCYAKVICNL ------------------------------------------------------------ KDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQLDSTIGIHPVCAEIFTTLSVTKRSG ------------------------------------------------------------ GDILQSGCCG ---------- >GLUTAREDOXIN-LIKE PROTEIN; SWP:Q47414; PDB:1H75A; MRITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALRAQGFRQLPVVIAGDLS ----------1--1---------------------------------------------- WSGFRPDMINRLHPAP ---------------- >SEROTRANSFERRIN; SWP:P09571; PDB:1H76A; QKTVRWCTISNQEANKCSSFRENMSKAVKNGPLVSCVKKSSYLDCIKAIRDKEADAVTLD ------1---------2------------------2--------1--------------- AGLVFEAGLAPYNLKPVVAEFYGQKDNPQTHYYAVAVVKKGSNFQWNQLQGKRSCHTGLG ------------------------------------------------------3----- RSAGWIIPMGLLYDQLPEPRKPIEKAVASFFSSSCVPCADPVNFPKLCQQCAGKGAEKCA ----------------------------------4--5---------6--4-------6- CSNHEPYFGYAGAFNCLKEDAGDVAFVKHSTVLENLPDKADRDQYELLCRDNTRRPVDDY 5--------------3--------------------------------7----------- ENCYLAQVPSHAVVARSVDGQEDSIWELLNQAQEHFGRDKSPDFQLFSSSHGKDLLFKDS --7--------------------------------------------------------- ANGFLKIPSKMDSSLYLGYQYVTALRNLREEECKKVRWCAIGHEETQKCDAWSINSGGKI --------------------------------8-----9---------a----------- ECVSAENTEDCIAKIVKGEADAMSLDGGYIYIAGKCGLVPVLAENYKTEGENCVNTPEKG -a--------9------------------------b----------------c------- YLAVAVVKKSSGPDLNWNNLKGKKSCHTAVDRTAGWNIPMGLLYNKINSCKFDQFFGEGC -------------------------d-----------------------e---------f APGSQRNSSLCALCIGSERAPGRECLANNHERYYGYTGAFRCLVEKGDVAFVKDQVVQQN ----------g--f----------g----------------d------------------ TDGKNKDDWAKDLKQMDFELLCQNGAREPVDNAENCHLARAPNHAVVARDDKVTCVAEEL ---------------------h-------------h------------------8----- LKQQAQFGRHVTDCSSSFCMFKSNTKDLLFRDDTQCLARVGKTTYESYLGADYITAVANL -------------i----i----------------c------------------------ RKCSTSKLLEACTFHSA --e--------b----- >IOTA-CARRAGEENASE; SWP:Q9F5I8; PDB:1H80A; VSPKTYKDADFYVAPTQQDVNYDLVDDFGANGNDTSDDSNALQRAINAISRKPNGGTLLI ------------------------------------------------------------ PNGTYHFLGIQMKSNVHIRVESDVIIKPTWNGDGKNHRLFEVGVNNIVRNFSFQGLGNGF ------------------------------------------------------------ LVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNKTIFASILVDVTERNGRLHWSRNGIIE ------------------------------------------------------------ RIKQNNALFGYGLIQTYGADNILFRNLHSEGGIALRMETDNLLMKNYKQGGIRNIFADNI ------------------------------------------------------------ RCSKGLAAVMFGPHFMKNGDVQVTNVSSVSCGSAVRSDSGFVELFSGCAQTPAARVTQKD -1----------------------------1----------------2------------ ACLDKAKLEYGIEPGSFGTVKVFDVTARFGYNADLKQDQLDYFSTSNPMCKRVCLPTKEQ -2-----------------------------------------------3---4------ WSKQGQIYIGPSLAAVIDTTPETSKYDYDVKTFNVKRINFPVNSHKTIDTNTESSRVCNY ---------------------------------------------------------3-- YGMSECSSSRWER -----4------- >CARBOXYPEPTIDASE GP180 RE; SWP:Q90240; PDB:1H8LA; QAVQPVDFRHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAG ------------------------------------------------------------ EPEFKYIGNMHGNEVVGRELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEK ------------------------------------------------------------ SQEGDRGGTVGRNNSNNYDLNRNFPDQFFQVTDPPQPETLAVMSWLKTYPFVLSANLHGG ------------------------------------------------------------ SLVVNYPFDDDEQGIAIYSKSPDDAVFQQLALSYSKENKKMYQGSPCKDLYPTEYFPHGI ----------------------------------------------1------------- TNGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPKAEELPKYWEQNRRSLLQFIKQVH -------------------------------1---------------------------- RGIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWRLLVQGTYKVTASARGYDPVT ------------------------------------------------------------ KTVEVDSKGGVQVNFTLSRT -------------------- >MUTANT AL2 6E7S9G; SWP:NA; PDB:1H8NA; KDIVLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVP -----------------------1------------------------------------ DRFTGSGSGTDFTLTISNVQSEDLADYFCQQYSSYPLTFGAGTKLELQVQLQESGGELVR ----------------------------1------------------------------- PGASVKLSCKASGYTFTSYWINWVKQRPGQGLEWIGNIYPSDSYTNYNQKFKDKATLTVD --------2--------------------------------------------------- KSSSTAYMQLSSLTSEDSAVYFCARWGYWGQGTL ----------------------2----------- >SEMINAL PLASMA PROTEIN PD; SWP:P02784; PDB:1H8PA; EECVFPFVYRNRKHFDCTVHGSLFPWCSLDADYVGRWKYCAQRDYAKCVFPFIYGGKKYE --1-------------2---------1------------2-------3------------ TCTKIGSMWMSWCSLSPNYDKDRAWKYC -4----------3--------------4 >EOSINOPHIL GRANULE MAJOR ; SWP:P13727; PDB:1H8UA; RYLLVRSLQTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSALNQGQVWIGGRITGSG -----------------1------------------------------------------ RCRRFQWVDGSRWNFAYWAAHQPWSRGGHCVALCTRGGYWRRAHCLRRLPFICSY -----------------------------2--------------2-------1-- >MACROPHAGE INFLAMMATORY P; SWP:O89093; PDB:1HA6A; ASNYDCCLSYIQTPLPSRAIVGFTRQMADEACDINAIIFHTKKRKSVCADPKQNWVKRAV -----12------------------------1---------------2------------ NLLSLRVKKM ---------- >PHEROMONE; SWP:NA; PDB:1HA8A; GECEQCFSDGGDCTTCFNNGTGPCANCLAGYPAGCSNSDCTAFLSQCYGGC --1--2------3--2-------1--4-------5----4------3---5 >ARTHROPODAN HEMOCYANIN; SWP:P04254; PDB:1HC1; TGNAQKQQDINHLLDKIYEPTKYPDLKDIAENFNPLGDTSIYNDHGAAVETLMKELNDHR ------------------------------------------------------------ LLEQRHWYSLFNTRQRKEALMLFAVLNQCKEWYCFRSNAAYFRERMNEGEFVYALYVSVI ----------------------------1----1-------------------------- HSKLGDGIVLPPLYQITPHMFTNSEVIDKAYSAKMTQKPGTFNVSFKNREQRVAYFGEDI ------------------------------------------------------------ GMNIHHVTWHMDFPFWWEDSYGYHLDRKGELFFWVHHQLTARFDFERLSNWLDPVDELHW ------------------------------------------------------------ DRIIREGFAPLTSYKYGGEFPVRPDNIHFEDVDGVAHVHDLEITESRIHEAIDHGYITDS ------------------------------------------------------------ DGHTIDIRQPKGIELLGDIIESSKYSSNVQYYGSLHNTAHVMLGRQGDPHGKFNLPPGVM ------------------------------------------------------------ EHFETATRDPSFFRLHKYMDNIFKKHTDSFPPYTHDNLEFSGMVVNGVAIDGELITFFDE ------------------------------------------------------------ FQYSLINAVDSGENIEDVEINARVHRLNHNEFTYKITMSNNNDGERLATFRIFLCPIEDN ------------------------------------------------------2----- NGITLTLDEARWFCIELDKFFQKVPSGPETIERSSKDSSVTVPDMPSFQSLKEQADNAVN -------------2---------------------------------------------- GGLDLSAYERSCGIPDRMLLPKSKPEGMEFNLYVAVTDGDKDTEGHHAQCGVHGEAYPDN -----------3-------------------------------------3---------- RPLGYPLERRIPDERVIDGVSNIKHVVVKIVHHL ---------------------------------- >ALPHA-BUNGAROTOXIN; SWP:P01378; PDB:1HC9A; IVCHTTATSPISAVTCPPGENLCYRKMWCDVFCSSRGKVVELGCAATCPSKKPYEEVTCC --1------------2------1-----3---3----------2---4----------45 STDKCNPHPKQRPG ----5--------- >Choriogonadotropin subuni; SWP:P01233; PDB:1HCNB; KEPLRPRCRPINATLAVEKEGCPVCITVNTTICAGYCPTMTRVLQGVLPALPQVVCNYRD -------1-------------2--3-------4---5------------------1---- VRFESIRLPGCPRGVNPVVSYAVALSCQCALCRRSTTDCGGPKDHPLTCD ----------2---------------4-5--6------6---------3- >ENDOGLUCANASE; SWP:O93782; PDB:1HD5A; ADGKSTRYWDCCKPSCGWAKKAPVNQPVFSCNANFQRLTDFDAKSGCEPGGVAYSCADQT ----------12---3--------------4---------------2--------4---- PWAVNDDFAFGFAATSIAGSNEAGWCCACYELTFTSGPVAGKKMVVQSTSTSNHFDLNIP -------------------------35-6------------------------------- GGGVGIFDGCTPQFGGLPGQRYGGISSRNECDRFPDALKPGCYWRFDWFKNADNPSFSFR ---------1--------------------7----------7------------------ QVQCPAELVARTGCRRNDDGNFPAV ---6---------5----------- >PHEROMONE ER-22; SWP:P58548; PDB:1HD6A; DICDIAIAQCSLTLCQDCENTPICELAVKGSCPPPWS --1------2----3--1-----3-------2----- >SERINE PROTEINASE INHIBIT; SWP:Q9NQ38; PDB:1HDLA; KNEDQEMCHEFQAFMKNGKLFCPQDKKFFQSLDGIMFINKCATCKMILEKEAKSQ -------1-------------2------------------2--1----------- >HIGH AFFINITY NERVE GROWT; SWP:P04629; PDB:1HE7A; SHMPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETV ------------------1----------------------------------------- RHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNPFEFNPE ---1------------------------------------------- >Bifunctional xylanase/dea; SWP:P54865; PDB:1HEHC; TGSCSVSAVRGEEWADRFNVTYSVSGSSSWVVTLGLNGGQSVQSSWNAALTGSSGTVTAR ---1-------------------------------------------------------- PNGSGNSFGVTFYKNGSSATPGATCATG ------------------------1--- >FACTOR H, 15TH AND 16TH C; SWP:P08603; PDB:1HFH; EKIPCSQPPQIEHGTINSSRSSQESYAHGTKLSYTCEGGFRISEENETTCYMGKWSSPPQ ----1------------------------------2-------------1---------- CEGLPCKSPPEISHGVVAHMSDSYQYGEEVTYKCFEGFGIDGPAIAKCLGEKWSHPPSCI 2----3---------------------------4-------------3----------4- >LACCASE 1; SWP:Q9Y780; PDB:1HFUA; AIVNSVDTMTLTNANVSPDGFTRAGILVNGVHGPLIRGGKNDNFELNVVNDLDNPTMLRP ------------------------------------------------------------ TSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGL ------------------------1-------------------------------2--- RGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQQPDATLINGKGRYVGGPAAE ------------------------------------------------------------ LSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRY --------------------2--------------------------------------- SFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQL ------------------------------------------------------------ NEADLHALIDPAAPGIPTPGAADVNLRFQLGFSGGRFTINGTAYESPSVPTLLQIMSGAQ ------------------------------------------------------------ SANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVK ------------------------------------------------------------ RDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEW ------------------------------------------------------------ AQLCEIYDDLPPEATSIQTV ---1---------------- >ALPHA-LACTALBUMIN; SWP:P00713; PDB:1HFX; KQLTKCALSHELNDLAGYRDITLPEWLCIIFHISGYDTQAIVKNSDHKEYGLFQINDKDF -----1---------------------2-------------------------------- CESSTTVQSRNICDISCDKLLDDDLTDDIMCVKKILDIKGIDYWLAHKPLCSDKLEQWYC 3-----------4---3-------------4-------------------2--------1 EAQ --- >ENDOPOLYGALACTURONASE; SWP:Q07181; PDB:1HG8A; DPCSVTEYSGLATAVSSCKNIVLNGFQVPTGKQLDLSSLQNDSTVTFKGTTTFATTADND --1--------------1------------------------------------------ FNPIVISGSNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNL ------------------------------------------------------------ NIQNWPVHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLD ------------------------------------------------------------ NNHVYNQDDCVAVTSGTNIVVSNMYCSGGHGLSIGSVGGKSDNVVDGVQFLSSQVVNSQN ---------2---------------2---------------------------------- GCRIKSNSGATGTINNVTYQNIALTNISTYGVDVQQDYLNGGPTGKPTNGVKISNIKFIK ------------------------------------------------------------ VTGTVASSAQDWFILCGDGSCSGFTFSGNAITGGGKTSSCNYPTNTCPS ---------------3----3------------------4------4-- >HUMAN GROWTH HORMONE; SWP:P01241; PDB:1HGU; PTIPLSRLFQNAMLRAHRLHQLAFDTYEEFEEAYIPQKYSFLQAPQASLCFSESIPTPSN -------------------------------------------------1---------- REQAQQKSNLQLLRISLLLIQSWLEPVGFLRSVFANSLVYGASDSDVYDLLKDLEEGIQT ------------------------------------------------------------ LMGRLEDGSPRTGQAFKQTYAKFDANSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCR -----------------------------------------1----------------2- SVEGSCG -----2- >GUINEA FOWL LYSOZYME; SWP:P00704; PDB:1HHL; KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNSQATNRNTDGSTDYGVLQINS -----1-----------------------2------------------------------ RWWCNDGRTPGSRNLCNIPCSALQSSDITATANCAKKIVSDGDGMNAWVAWRKHCKGTDV ---3-----------4---3-------------4--------------------2----- RVWIKGCRL ------1-- >IGG2A KAPPA ANTIBODY CB41; SWP:Q7TS98; PDB:1HI6A; DIKMTQSPSSMYTSLGERVTITCKASQDINSFLTWFLQKPGKSPKTLIYRANRLMIGVPS ----------------------1------------------------------------- RFSGSGSGQTYSLTISSLEYEDMGIYYCLQYDDFPLTFGAGTKLDLKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKEINVKWKIDGSERQNGVLDSWTEQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >IGG2A KAPPA ANTIBODY CB41; SWP:NA; PDB:1HI6B; QDQLQQSGAELVRPGASVKLSCKALGYIFTDYEIHWVKQTPVHGLEWIGGIHPGSSGTAY ---------------------1-------------------------------------- NQKFKGKATLTADKSSTTAFMELSSLTSEDSAVYYCTRKDYWGQGTLVTVSAAKTTAPSV -----------------------------------1------------------------ YPLVPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSV ------------------2----------------------------------------- TVTSNTWPSQTITCNVAHPASSTKVDKKIEPRV -------------2------------------- >PS2 PROTEIN; SWP:P04155; PDB:1HI7A; EAQTETCTVAPRERQNCGFPGVTPSQCANKGCCFDDTVRGVPWCFYPNTIDVPPEEECEF ------1---------2---------3----21----------3---------------- >BETA-1,4-GALACTANASE; SWP:P83691; PDB:1HJQA; ALQYKGVDWSSVMVEERAGVRYKNVNGQEKPLEYILAENGVNMVRQRVWVNPWDGNYNLD ------------------------------------------------------------ YNIQLARRAKAAGLGLYINFHYSDTWADPAHQTTPAGWPSDINNLAWKLYNYTLDSMNRF ------------------------------------------------------------ ADAGIQVDIVSIGNEITQGLLWPLGKTNNWYNIARLLHSAAWGVKDSRLNPKPKIMVHLD ------------------------------------------------------------ NGWNWDTQNWWYTNVLSQGPFEMSDFDMMGVSFYPFYSASATLDSLRRSLNNMVSRWGKE ------------------------------------------------------------ VAVVETNWPTSCPYPRYQFPADVRNVPFSAAGQTQYIQSVANVVSSVSKGVGLFYWEPAW -----------1------------------------------------------------ IHNANLGSSCADNTMFTPSGQALSSLSVFHRI ---------1---------------------- >BETA-1,4-GALACTANASE; SWP:P83692; PDB:1HJSA; ALTYRGVDWSSVVVEERAGVSYKNTNGNAQPLENILAANGVNTVRQRVWVNPADGNYNLD ------------------------------------------------------------ YNIAIAKRAKAAGLGVYIDFHYSDTWADPAHQTMPAGWPSDIDNLSWKLYNYTLDAANKL ------------------------------------------------------------ QNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLD ------------------------------------------------------------ NGWDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSSSATLSALKSSLDNMAKTWNKE ------------------------------------------------------------ IAVVETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSSVSRGVGLFYWEPAW -----------1------------------------------------------------ IHNANLGSSCADNTMFSQSGQALSSLSVFQRI ---------1---------------------- >CHITINASE-3 LIKE PROTEIN ; SWP:P36222; PDB:1HJXA; YKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHIDTWEWNDVTLYGMLN ----1------------------------1------------------------------ TLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLY ------------------------------------------------------------ PGRRDKQHFTTLIKEMKAEFIKEAQPGKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFI ------------------------------------------------------------ SIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRFSNTDYAVGYMLRLGAPASKLVMGIPTF ------------------------------------------------------------ GRSFTLASSETGVGAPISGPGIPGRFTKEAGTLAYYEICDFLRGATVHRILGQQVPYATK --------------------------------------2--------------------- GNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQGSFCGQDLRFPLTNAIKDALA ------------------------------------------2----------------- AT -- >NK CELL ACTIVATING RECEPT; SWP:O95944; PDB:1HKFA; SKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFT -----------------1--------------2-------2------------------- IWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSVRFYLVVS --------------------------1--------------------- >MICRONEME PROTEIN 5 PRECU; SWP:Q9U966; PDB:1HKYA; DYKDDDDKVKLTCYQNGVSFTGGKAISEAKAASSQACQELCEKDAKCRFFTLASGKCSLF ------------1-----------------------2---3-----3---------2--- ADDAALRPTKSDGAVSGNKRCILLED --------------------1----- >PUTATIVE ALPHA-L-FUCOSIDA; SWP:Q9WYE2; PDB:1HL9A; RYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWATPDAWFFQNPYAEWYENSLRIK ------------------------------------------------------------ ESPTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLW ------------------------------------------------------------ GTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGLDWRFTTEPIRYPEDLSYIR ------------------------------------------------------------ PNTYEYADYAYKQVMELVDLYLPDVLWNDMGWPEKGKEDLKYLFAYYYNKHPEGSVNDRW ------------------------------------------------------------ GVPHWDFKTAELPGYKWEFTRGIGLSFGYNRNEMLSVEQLVYTLVDVVSKGGNLLLNVGP ------------------------------------------------------------ KGDGTIPDLQERLLGLGEWLRKYGDAIYGTSVWERCCAKTEDGTEIRFTRKCNRIFVIFL -----------------------------------11----------------------- GIPTGEKIVIEDLNLSAGTVRHFLTGERLSFKNVGKNLEITVPKKLLETDSITLVLEAVE ------------------------------------------------------------ >LIPASE, GASTRIC; SWP:P07098; PDB:1HLGA; SPEVTMNISQMITYWGYPNEEYEVVTEDGYILEVNRIPYGKKNSGQRPVVFLQHGLLASA ------------------------------------------------------------ TNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDL ------------------------------------------------------------ PATIDFIVKKTGQKQLHYVGHSQGTTIGFIAFSTNPSLAKRIKTFYALAPVATVKYTKSL ------------------------------------------------------------ INKLRFVPQSLFKFIFGDKIFYPHNFFDQFLATEVCSREMLNLLCSNALFIICGFDSKNF -----------------------------------1--------1--------------- NTSRLDVYLSHNPAGTSVQNMFHWTQAVKSGKFQAYDWGSPVQNRMHYDQSQPPYYNVTA ------------------------------------------------------------ MNVPIAVWNGGKDLLADPQDVGLLLPKLPNLIYHKEIPFYNHLDFIWAMDAPQEVYNDIV ------------------------------------------------------------ SMISEDKK -------- >HONGOTOXIN 1; SWP:P59847; PDB:1HLYA; TVIDVKCTSPKQCLPPCKAQFGIRAGAKCMNGKCKCYPH ------1-----2---3-----------1----2-3--- >ANNEXIN 1; SWP:P19619; PDB:1HM6A; AMVSEFLKQAWFIDNEEQEYIKTVKGSKGGPGSAVSPYPTFNPSSDVEALHKAITVKGVD ------------------------------------------------------------ EATIIEILTKRTNAQRQQIKAAYLQEKGKPLDEALKKALTGHLEEVALALLKTPAQFDAD ------------------------------------------------------------ ELRAAMKGLGTDEDTLNEILASRTNREIREINRVYKEELKRDLAKDITSDTSGDYQKALL ------------------------------------------------------------ SLAKGDRSEDLAINDDLADTDARALYEAGERRKGTDLNVFITILTTRSYPHLRRVFQKYS ------------------------------------------------------------ KYSKHDMNKVLDLELKGDIENCLTVVVKCATSKPMFFAEKLHQAMKGIGTRHKTLIRIMV ------------------------------------------------------------ SRSEIDMNDIKACYQKLYGISLCQAILDETKGDYEKILVALCG ----------------------1------------------1- >PROPHOSPHOLIPASE A2; SWP:P00592; PDB:1HN4A; ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDS ----------1---------------2-3--------------43-----5--------- CKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDT 6---------------1------7------6----7-5------4--------------- KKYC ---2 >CD2; SWP:P06729; PDB:1HNF; TNALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLF ------------------------------------------------------------ KNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWTCINTTLTCE ---------------------------------------------------1------2- VMNGTDPELNLYQDGKHLKLSQRVITHKWTTSLSAKFKCTAGNKVSKESSVEPVSCPEK --------------------------------------2----------------1--- >5'-NUCLEOTIDASE; SWP:P07024; PDB:1HP1A; YEQDKTYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDI ------------------------------------------------------------ NTGVPESDLQDAEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQK ------------------------------------------------------------ STGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQ ------------------------------------------------------------ TEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKK ----------------------------------------------------1------- QVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKRVL ---------1-------------------------------------------------- YTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAAQM ------------------------------------------------------------ DRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMK ------------------------------------------------------------ PDSGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPRLDNKPG ------------------------------------------------------------ YVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ ------------------------------------ >TITYUSTOXIN K ALPHA; SWP:P46114; PDB:1HP2A; VFINAKCRGSPECLPKCKEAIGKAAGKCMNGKCKCYP ------1-----2---3----------1----2-3-- >HU-P8; SWP:P56277; PDB:1HP8; MPQKDPCQKQACEIQKCLQANSYMESKCQAVIQELRKCCAQYPKGRSVVCSGFEKEEEEN ------1---------2----------2---------13----------3---------- LTRKSASK -------- >NKG2-D; SWP:O54709; PDB:1HQ8A; GYCGPCPNNWICHRNNCYQFFNEEKTWNQSQASCLSQNSSLLKIYSKEEQDFLKLVKSYH --1--2-----1----2----------------3-------------------------- WMGLVQIPANGSWQWEDGSSLSYNQLTLVEIPKGSCAVYGSSFKAYTEDCANLNTYICMK -----------------------------------4-------------4-------3-- RAV --- >Hirudin variant-1; SWP:P01050; PDB:1HRTI; VVYTDCTESGQNLCLCEGSNVCGQGNKCILGSDGEKNQCVTGEGTPKPQSHNDGDFEEIP -----1-------1-2-----3-----2----------3--------------------- EEYLQ ----- >n/a; SWP:P01891; PDB:1HSBA; GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYW ------------------------------------------------------------ DRNTRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYRQDAYDG ----------------------------------------1------------------- KDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQWRAYLEGTCVEWLRRYLENGKETLQ -------------------------------------------1---------------- RTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGT ----------------------2------------------------------------- FQKWVAVVVPSGQEQRYTCHVQHEGLPKPL ------------------2----------- >HISTIDINE-BINDING PROTEIN; SWP:P0AEU0; PDB:1HSLA; AIPQKIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLK -------------------------------------1------1--------------- AKKIDAIMSSLSITEKRQQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVLQGT ------------------------------------------------------------ TQETFGNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKF ------------------------------------------------------------ GGPAVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG ---------------------------------------------------------- >0.19 ALPHA-AMYLASE INHIBI; SWP:P01085; PDB:1HSSA; MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSM -1-------------2-------3------------24---------1-5---------- YKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA ---------3---------------4---------------5--------- >Gastricsin [Precursor]; SWP:P20142; PDB:1HTRB; SVTYEPMAYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSE --------------------------------------------1----1---------- SSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGI ------------------------------------------------------------ MGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQI ------------------------------------------------------------ YWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ ---------------------------2---2---------------------------- EDEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNNGYCTVGVEPTYLSSQNGQP ----------3--------------------------------3---------------- LWILGDVFLRSYYSVYDLGNNRVGFATAA ----------------------------- >HUMAN MACROPHAGE INFLAMMA; SWP:P13236; PDB:1HUMA; APMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQPAVVFQTKRSKQVCADPSESWVQ ----------12----------------------1---------------2--------- EYVYDLELN --------- >MANNOSE-BINDING PROTEIN; SWP:P11226; PDB:1HUP; AASERKALQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRN -----------------------------------------------1------------ AAENGAIQNLIKEEAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLK ------------------------------------------------------2----- NGQWNDVPCSTSHLAVCEFPI --------2-------1---- >HUMAN GROWTH HORMONE; SWP:P01241; PDB:1HUW; FPTIPLSRLADNAWLRADRLNQLAFDTYQEFEEAYIPKEQIHSFWWNPQTSLCPSESIPT ----------------------------------------------------1------- PSNKEETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEG ------------------------------------------------------------ IQTLMGRLEALLKNYGLLYCFNKDMSKVSTYLRTVQCRSVEGSCGF -------------------1----------------2------2-- >Ribosome-inactivating pro; SWP:Q9AVR2; PDB:1HWMB; ETCAIPAPFTRRIVGRDGLCVDVRNGYDTDGTPIQLWPCGTQRNQQWTFYNDKTIRSMGK -------------------1------------------1--------------------- CMTANGLNSGSYIMITDCSTAAEDATKWEVLIDGSIINPSSGLVMTAPSGASRTTLLLEN 2----------------2------------------------------------------ NIHAASQGWTVSNDVQPIATLIVGYNEMCLQANGENNNVWMEDCDVTSVQQQWALFDDRT ----------------------------3--------------3---------------- IRVNNSRGLCVTSNGYVSKDLIVIRKCQGLATQRWFFNSDGSVVNLKSTRVMDVKESDVS ---------4----------------4--------------------------------- LQEVIIFPATGNPNQQWRTQVPQI ------------------------ >ALPHA AMYLASE (PPA); SWP:P00690; PDB:1HX0A; YAPQTQSGRTSIVHLFEWRWVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWER --------------------------1--------------------------------- YQPVSYKLCTRSGNENEFRDMVTRCNNVGVRIYVDAVINHMCGSGAAAGTGTTCGSYCNP --------2---------------1----------------------------2------ GNREFPAVPYSAWDFNDGKCKTASGGIESYNDPYQVRDCQLVGLLDLALEKDYVRSMIAD -------------------3------------------3--------------------- YLNKLIDIGVAGFRIDASKHMWPGDIKAVLDKLHNLNTNWFPAGSRPFIFQEVIDLGGEA ------------------------------------------------------------ IKSSEYFGNGRVTEFKYGAKLGTVVRKWSGEKMSYLKNWGEGWGFMPSDRALVFVDNHDN ------------------------------------------------------------ QRGHGAGGSSILTFWDARLYKIAVGFMLAHPYGFTRVMSSYRWARNFVNGEDVNDWIGPP ------------------------------------------------------------ NNNGVIKEVTINADTTCGNDWVCEHRWREIRNMVWFRNVVDGQPFANWWDNGSNQVAFGR ----------------4-----4------------------------------------- GNRGFIVFNNDDWQLSSTLQTGLPGGTYCDVISGDKVGNSCTGIKVYVSSDGTAQFSISN ----------------------------5-----------5------------------- SAEDPFIAIHAESKL --------------- >BAG family molecular chap; SWP:Q99933; PDB:1HX1B; GNSPQEEVELKKLKHLEKSVEKIADQLEELNKELTGIQQGFLPKDLQAEALCKLDRRVKA ---------------------------------------------------1-------- TIEQFMKILEEIDTLILPENFKDSRLKRKGLVKKVQAFLAECDTVEQNICQE -------------------------------------------------1-- >BSTI; SWP:Q90248; PDB:1HX2A; NFVCPPGQTFQTCASSCPKTCETRNKLVLCDKKCNQRCGCISGTVLKSKDSSECVHPSKC ---1--------2---3---4--------3---2---1-5-------------5-----4 >GAMMA-DELTA T-CELL RECEPT; SWP:NA; PDB:1HXMA; AIELVPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGF ----------------------1------------------------------------- KDNFQGDIDIAKNLAVLKILAPSERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPR -------------------------------1---------------------------- SQPHTKPSVFVMKNGTNVACLVKEFYPKDIRINLVSSKKITEFDPAIVISPSGKYNAVKL -------------------2---------------------------------------- GKYEDSNSVTCSVQHDNKTVHSTDFE ----------2--------------- >GAMMA-DELTA T-CELL RECEPT; SWP:NA; PDB:1HXMB; AGHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRK ----------------------1------------------------------------- ESGIPSGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLI ------------------------------------1----------------------- ITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWEEKKSNTILGSQ ---------------------------------2-------------------------- EGNTMKTNDTYMKFSWLTVPEKSLDKEHRCIVRHENNKNGVDQEIIFPPI -----------------------------2-------------------- >HEMOPEXIN; SWP:P20058; PDB:1HXN; ESTRCDPDLVLSAMVSDNHGATYVFSGSHYWRLDTNRDGWHSWPIAHQWPQGPSTVDAAF ----1------------------------------------------------------- SWEDKLYLIQDTKVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRL -----------------------------------------------------2------ HIMAGRRLWWLDLKSGAQATWTELPWPHEKVDGALCMEKPLGPNSCSTSGPNLYLIHGPN -----------------------------------2---------3-------------- LYCYRHVDKLNAAKNLPQPQRVSRLLGCTH --3------------------------1-- >COCAINE AND AMPHETAMINE R; SWP:Q16568; PDB:1HY9A; YGQVPMCDAGEQCAVRKGARIGKLCDCPRGTSCNSFLLKCL ------1-----2-----------1-3-----2------3- >AGOUTI RELATED PROTEIN; SWP:O00253; PDB:1HYKA; CVRLHESCLGQQVPCCDPCATCYCRFFNAFCYCRKLGTAMNPCSRT 1------2------31--4--2-5------5-3---------4--- >HYDROPHOBIC PROTEIN FROM ; SWP:P24337; PDB:1HYP; PSCPDLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRALGILNLNRNLQLILN --1-----2-------------23-------------1-4-------------------- SCGRSYPSNATCPRT -3---------4--- >HIV-1 REVERSE TRANSCRIPTA; SWP:NA; PDB:1HYSD; QITLKESGPGIVQPSQPFRLTCTFSGFSLSTSGIGVTWIRQPSGKGLEWLATIWWDDDNR ---------------------1-------------------------------------- YNPSLKSRLTVSKDTSNNQAFLNMMTVETADTAIYYCAQSAITSVTDSAMDHWGQGTSVT ------------------------------------1----------------------- VSSAATTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVL -----------------------------2------------------------------ QSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKI ------------------------2--------------- >ALKYL HYDROPEROXIDE REDUC; SWP:P19480; PDB:1HYUA; MLDTNMKTQLRAYLEKLTKPVELIATLDDSAKSAEIKELLAEIAELSDKVTFKEDNTLPV ------------------------------------------------------------ RKPSFLITNPGSQQGPRFAGSPLGHEFTSLVLALLWTGGHPSKEAQSLLEQIRDIDGDFE ------------------------------------------------------------ FETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITERNVMGVPAVFVNGKE ------------------------------------------------------------ FGQGRMTLTEIVAKVDTGAEKRAAEALNKRDAYDVLIVGSGPAGAAAAVYSARKGIRTGL ------------------------------------------------------------ MGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEG ------------------------------------------------------------ GLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAV --------------------------------------------1--1------------ IGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKVRSLKNVDIILNAQTTEVKGD ------------------------------------------------------------ GSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEGALERNRMGEIIIDAKCETSV ------------------------------------------------------------ KGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRTKIA ----------------------------------------- >GUANYL-SPECIFIC RIBONUCLE; SWP:P00651; PDB:1I0VA; ACDYTCGSNCYSSSDVSTAQAAGYKLHEDGETVGSNSYPHKYNNYEGFDFSVSSPYYEWP -1---2---1-------------------------------------------------- ILSSGDVYSGGSPGADRVVFNENNQLAGVITHTGASGNNFVECT ------------------------------------------2- >PRION-LIKE PROTEIN; SWP:Q9QUG3; PDB:1I17A; RVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCV --------------------------------------------1-------------2- NATQAANQAEFSREKQDSKLHQRVLWRLIKEICSAKHCDFWLERGAA --------------------------------2----1--------- >IG GAMMA-2A CHAIN C REGIO; SWP:P20760; PDB:1I1CA; SVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNS ----------------------1------------------------------------- TLRSVSELPIVERDWLNGKTFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEM ----------------------1------------------------------------- TQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLYSKLNVKKETWQ --------2--------------------------------------------------- QGNTFTCSVLHEGLENEHTEKSLSH ------2------------------ >MELANOMA DERIVED GROWTH R; SWP:Q16674; PDB:1I1JA; GPMPKLADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFW -----------1----1-----------------2------------------------- GGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYC ---------------------------------------------2 >Interleukin-6 homolog [Fr; SWP:Q98823; PDB:1I1RB; EFEKDLLIQRLNWMLWVIDECFRDLCYRTGICKGILEPAAIFHLKLPAINDTDHCGLIGF -------------------------1-----1----------------------2----- NETSCLKKLADGFFEFEVLFKFLTTEFGKSVINVDVMELLTKTLGWDIQEELNKLTKTHY ----2------------------------------------------------------- SPPKFDRGLLGRLQGLKYWVRHFASFYVLSAMEKFAGQAVRVLDSIP ----------------------------------------------- >ENDO-1,4-BETA-XYLANASE; SWP:P23360; PDB:1I1WA; AAQSVDQLIKARGKVYFGVATDQNRLTTGKNAAIIQANFGQVTPENSMKWDATEPSQGNF ------------------------------------------------------------ NFAGADYLVNWAQQNGKLIRGHTLVWHSQLPSWVSSITDKNTLTNVMKNHITTLMTRYKG ------------------------------------------------------------ KIRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYINDYNLDSASY ------------------------------------------------------------ PKTQAIVNRVKKWRAAGVPIDGIGSQTHLSAGQGASVLQALPLLASAGTPEVAITELDVA ------------------------------------------------------------ GASSTDYVNVVNACLNVSSCVGITVWGVADPDSWRASTTPLLFDGNFNPKPAYNAIVQNL -------------1-----1---------------------------------------- QQ -- >PTU-1; SWP:NA; PDB:1I26A; AEKDCIAPGAPCFGTDKPCCNPRAWCSSYANKCL ----1------2------31-----2------3- >DEFENSIN HELIOMICIN; SWP:P81544; PDB:1I2VA; DKLIGSCVWGAVNYTSDCNGECLLRGYKGGHCGSFANVNCWCET ------1----------2---3---------1-------2-3-- >RIBONUCLEASE HII; SWP:O29634; PDB:1I39A; MKAGIDEAGKGCVIGPLVVAGVACSDEDRLRKLGVKDSKKLSQGRREELAEEIRKICRTE -----------------------1--------------------------------1--- VLKVSPENLDERMAAKTINEILKECYAEIILRLKPEIAYVDSPDVIPERLSRELEEITGL ------------------------------------------------------------ RVVAEHKADEKYPLVAAASIIAKVEREREIERLKEKFGDFGSGYASDPRTREVLKEWIAS ------------------------------------------------------------ GRIPSCVRMRWKTVSNLRQK -------------------- >ANTIBODY VHH LAMA DOMAIN; SWP:NA; PDB:1I3UA; VQLQESGGGLVQAGDSLKLSCEASGDSIGTYVIGWFRQAPGKERIYLATIGRNLVGPSDF --------------------1--------------------------------------- YTRYADSVKGRFAVSRDNAKNTVNLQMNSLKPEDTAVYYCAAKTTTWGGNDPNNWNYWGQ ---------------------------------------1-------------------- GTQVTV ------ >BETA-2-MICROGLOBULIN; SWP:P01892; PDB:1I4FA; GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYW ------------------------------------------------------------ DGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDG ----------------------------------------1------------------- KDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQ -------------------------------------------1---------------- RTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGT ----------------------2------------------------------------- FQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE ------------------2---------------- >CRUSTACYANIN; SWP:P80029; PDB:1I4UA; DKIPDFVVPGKCASVDRNKLWAEQTPNRNSYAGVWYQFALTNNPYQLIEKCVRNEYSFDG -----------1--------------------------------------2--------- KQFVIESTGIAYDGNLLKRNGKLYPNPFGEPHLSIDYENSFAAPLVILETDYSNYACLYS --------------------------------------------------------3--- CIDYNFGYHSDFSFIFSRSANLADQYVKKCEAAFKNINVDTTRFVKTVQGSSCPYDTQKT 1----------------------------3----------------------2------- L - >AZURIN; SWP:P00282; PDB:1I53A; AQCSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVV --1----------------------1---------------------------------- TDGMASGLDKDYLKPDDSRVIAQTKLIGSGEKDSVTFDVSKLKEGEHYMFFCTFPGHSAL ------------------------------------------------------------ MKGTLTLK -------- >PESTICIDIAL CRYSTAL PROTE; SWP:P21253; PDB:1I5PA; MNNVLNSGRTTICDAYNVVAHDPFSFEHKSLDTIQKEWMEWKRTDHSLYVAPVVGTVSSF ------------------------------------------------------------ LLKKVGSLIGKRILSELWGIIFPSGSTNLMQDILRETEQFLNQRLNTDTLARVNAELIGL ------------------------------------------------------------ QANIREFNQQVDNFLNPTQNPVPLSITSSVNTMQQLFLNRLPQFQIQGYQLLLLPLFAQA ------------------------------------------------------------ ANMHLSFIRDVILNADEWGISAATLRTYRDYLRNYTRDYSNYCINTYQTAFRGLNTRLHD ------------------------------------------------------------ MLEFRTYMFLNVFEYVSIWSLFKYQSLMVSSGANLYASGSGPQQTQSFTAQNWPFLYSLF ------------------------------------------------------------ QVNSNYILSGISGTRLSITFPNIGGLPGSTTTHSLNSARVNYSGGVSSGLIGATNLNHNF ------------------------------------------------------------ NCSTVLPPLSTPFVRSWLDSGTDREGVATSTNWQTESFQTTLSLRCGAFSARGNSNYFPD -1-------------------------------------------1-------------- YFIRNISGVPLVIRNEDLTRPLHYNQIRNIESPSGTPGGARAYLVSVHNRKNNIYAANEN ------------------------------------------------------------ GTMIHLAPEDYTGFTISPIHATQVNNQTRTFISEKFGNQGDSLRFEQSNTTARYTLRGNG ------------------------------------------------------------ NSYNLYLRVSSIGNSTIRVTINGRVYTVSNVNTTTNNDGVNDNGARFSDINIGNIVASDN ------------------------------------------------------------ TNVTLDINVTLNSGTPFDLMNIMFVPTNLPPLY --------------------------------- >HYDROGEN PEROXIDE-INDUCIB; SWP:P11721; PDB:1I6AA; ETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDAVIL ------------------------------------------------------------ ALVKESEAFIEVPLFDEPMLLAIYEDHPWANREAVPMADLAGEKLLMLEDGHCLRDQAMG ----------------------------------------------------1------- FCFEAGADEDTHFRATSLETLRNMVAAGSGITLLPALAVPPERKRDGVVYLPAIKPEPRR -1---------------------------------------------------------- TIGLVYRPGSPLRSRYEQLAEAIRARMDGHFD -------------------------------- >NEUROTOXIN V-5; SWP:P58779; PDB:1I6FA; KDGYPVDSKGCKLSCVANNYCDNQCKMKKASGGHCYAMSCYCEGLPENAKVSDSATNICG ----------1---2-----3---4---------2----3-4----------------1- >APOLIPOPROTEIN(A); SWP:P08519; PDB:1I71A; DCYHGDGQSYRGSFSTTVTGRTCQSWSSMTPHWHQRTTEYYPNGGLTRNYCRNPDAEIRP -1--------------------2---------------------------3--------- WCYTMDPSVRWEYCNLTQCPVME -2-----------3----1---- >EPIDERMAL GROWTH FACTOR R; SWP:P18529; PDB:1I8KA; DIELTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPS ----------------------1------------------------------------- RFSSSGTGTDFVFTIENTLSEDVGDYYCLQSFNVPLTFGCGTKLEI ---------------------------1------------------ >Ig heavy chain V region 5; SWP:P18529; PDB:1I8KB; QVKLQQSGGGLVKPGASLKLSCVTSGFTFRKFGMSWVRQTSDKCLEWVASISTGGYNTYY ---------------------1-------------------------------------- SDNVKGRFTISRENAKNTLYLQMSSLKSEDTALYYCTRGYSSTSYAMDYWGQGTTVTVS -----------------------------------1----------------------- >T LYMPHOCYTE ACTIVATION A; SWP:P33681; PDB:1I8LA; VIHVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFD ---------------1-------------------------------------------- ITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPT ---------------------1-------------------------------------- SNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSF -------2---------------------------------------------------- MCLIKYGHLRVNQTFNWNT -2----------------- >Cytotoxic T-lymphocyte pr; SWP:P16410; PDB:1I8LC; MHVAQPAVVLASSRGIASFVCEYASPGKATEVRVTVLRQADSQVTEVCAATYMMGNELTF --------------------1--------------------------2------------ LDDSICTGTSSGNQVNLTIQGLRAMDTGLYICKVELMYPPPYYLGIGNGAQIYVIDPE -----2-------------------------1-------------------------- >ANTI-PLATELET PROTEIN; SWP:Q01747; PDB:1I8NA; ETITAGNEDCWSKRPGWKLPDNLLTKTEFTSVDECRKMCEESAVEPSCYILQINTETNEC ---------1------------------------2---3--------3-----------2 YRNNEGDVTWSSLQYDQPNVVQWHLHACS ---------------------------1- >GRANULIN-1; SWP:P81013; PDB:1I8XA; VIHCDAATICPDGTTCSLSPYGVWYCSPFS ---1-----2-----1---------2---- >RECOMBINANT MONOCLONAL AN; SWP:NA; PDB:1I9IH; EVKLVESGGGLVKPGGSLKLSCAASGFTFSTYALSWVRQTADKRLEWVASIVSGGNTYYS ---------------------1-------------------------------------- GSVKGRFTISRDIARNILYLQMSSLRSEDTAMYYCAREYYGYVGLAYWGQGTLVTVSAAK ----------------------------------1------------------------- TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLY ------------------------2----------------------------------- TLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC -------------------2-------------------- >CD40 LIGAND; SWP:NA; PDB:1I9RH; QVQLVQSGAEVVKPGASVKLSCKASGYIFTSYYMYWVKQAPGQGLEWIGEINPSNGDTNF ---------------------1-------------------------------------- NEKFKSKATLTVDKSASTAYMELSSLRSEDTAVYYCTRSDGRNDMDSWGQGTLVTVSSAS -----------------------------------1------------------------ TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGL ------------------------2----------------------------------- YSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK --------------------2------------------ >CD40 LIGAND; SWP:NA; PDB:1I9RL; DIVLTQSPATLSVSPGERATISCRASQRVSSSTYSYMHWYQQKPGQPPKLLIKYASNLES ----------------------1------------------------------------- GVPARFSGSGSGTDFTLTISSVEPEDFATYYCQHSWEIPPTFGGGTKLEIKRTVAAPSVF -------------------------------1---------------------------- IFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLS -----------------2------------------------------------------ STLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR -----------------2----------------- >POLYGALACTURONASE; SWP:O74213; PDB:1IA5A; ATTCTFSGSNGASSASKSKTSCSTIVLSNVAVPSGTTLDLTKLNDGTHVIFSGETTFGYK ---1-----------------1-------------------------------------- EWSGPLISVSGSDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGL ------------------------------------------------------------ KIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQD ------------------------------------------------------------ DCVAVNSGENIYFSGGYCSGGHGLSIGSVGGRSDNTVKNVTFVDSTIINSDNGVRIKTNI -2---------------2------------------------------------------ DTTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTTGVPITDFVLDNVHGSVVSSGT ------------------------------------------------------------ NILISCGSGSCSDWTWTDVSVSGGKTSSKCTNVPSGASC -----3----3------------------4--------4 >ASTACIN; SWP:P07584; PDB:1IAB; AAILGDEYLWSGGVIPYTFAGVSGADQSAILSGMQELEEKTCIRFVPRTTESDYVEIFTS -----------------------------------------1------------------ GSGCWSYVGRISGAQQVSLQANGCVYHGTIIHELMHAIGFYHEHTRMDRDNYVTINYQNV ---2-------------------2------------------------------------ DPSMTSNFDIDTYSRYVGEDYQYYSIMHYGKYSFSIQWGVLETIVPLQNGIDLTDPYDKA ------------------------------------------------------------ HMLQTDANQINNLYTNECSL -----------------1-- >ADAMALYSIN II; SWP:P34179; PDB:1IAG; NLPQRYIELVVVADRRVFMKYNSDLNIIRTRVHEIVNIINKFYRSLNIRVSLTDLEIWSG ------------------------------------------------------------ QDFITIQSSSSNTLNSFGEWRERVLLIWKRHDNAQLLTAINFEGKIIGKAYTSSMCNPRS -------------------------------------------------------1---- SVGIVKDHSPINLLVAVTMAHELGHNLGMEHDGKDCLRGASLCIMRPGLTPGRSYEFSDD -----------------------------------2------2----------------- SMGYYQKFLNQYKPQCILNKP ---------------1----- >Igk-C protein; SWP:Q569Y8; PDB:1IAIH; QIQLVQSGPELKKPGETVKISCKASGYTFTNYGMNWVKQAPGKGLKWMAWINTYTGEPTY ---------------------1-------------------------------------- ADDFKGRFAFSLETSASTAYLQINNLKNEDTATYFCARDGYYENYYAMDYWGQGTSVTVS -----------------------------------1------------------------ SAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQS ---------------------------2-------------------------------- DLYTLSSSVTVTSSTTPSQSITCNVAHPASSTKVDKKID ----------------------2---------------- >Igk-C protein; SWP:Q58EU4; PDB:1IAIL; DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYSASYQYTGVPD ----------------------1------------------------------------- RFTGSGSRTDFTFTINSVQAEDLAVYYCHQHYSTPFTFGSGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >INTERCELLULAR ADHESION MO; SWP:P05362; PDB:1IAM; QTSVSPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQED --------------------1---2----------------------------------- SQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLT ----1---2--------------------------------------3------------ VVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGAQFSCRTELDLRPQGLELFENTSAPY --------------------------------------3--------------------- QLQTF ----- >Interleukin-4 receptor al; SWP:P24394; PDB:1IARB; FKVLQEPTCVSDYMSISTCEWKMNGPTNCSTELRLLYQLVFLLSEAHTCIPENNGGAGCV --------1---------1---------2-------------------3---------2- CHLLMDDVVSADNYTLDLWAGQQLLWKGSFKPSEHVKPRAPGNLTVHDTLLLTWSNPYPP 3----------------------------------------------------------- DNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAAGISYRARVRAWAQAYNTTWSE ------------------------------------------------------------ WSPSTKWH -------- >ASPERGILLOPEPSIN; SWP:Q12567; PDB:1IBQA; SKGSAVTTPQNNDEEYLTPVTVGKSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSS ------------------------------------------------------------ SATKLSGYSWDISYGDGSSASGDVYRDTVTVGGVTTNKQAVEAASKISSEFVQDTANDGL ------------------------------------------------------------ LGLAFSSINTVQPKAQTTFFDTVKSQLDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITY ------------------------------------------------------------ TDADSSQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQES ------------------------------------------------------------ YEAGGYVFSCSTDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNSGLGLSIL ---------1----------------------------------1--------------- GDVFLKSQYVVFNSEGPKLGFAAQA ------------------------- >PROTEINASE K; SWP:P06873; PDB:1IC6A; AAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYY ---------------------------------1-------------------------- YSSRDGNGHGTHCAGTVGSRTYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNN ------------------------------------------------------------ RNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTV --1------------------------------------------------------2-- GASDRYDRRSSFSNYGSVLDIFGPGTDILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL ------------------------------------------------------------ GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA --------2------------------------------ >Ig heavy chain V region 3; SWP:P01823; PDB:1IC7H; DVQLQESGPSLVKPSQTLSLTCSVTGDSITSAYWSWIRKFPGNRLEYMGYVSYSGSTYYN ---------------------1-------------------------------------- PSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANWAGDYWGQGTLVTVSAA ----------------------------------1------------------- >INSECT DEFENSIN A; SWP:P10891; PDB:1ICA; ATCDLLSGTGINHSACAAHCLLRGNRGGYCNGKGVCVCRN --1------------2---3---------1-----2-3-- >HLA class II histocompati; SWP:P04233; PDB:1ICFI; LTKCQEEVSHIPAVHPGSFRPKCDENGNYLPLQCYGSIGYCWCVFPNGTEVPNTRSRGHH ---1------------------1----------2------2-3----------------- NCSES -3--- >PECTIN LYASE A; SWP:Q01172; PDB:1IDK; VGVSGSAEGFAKGVTGGGSATPVYPDTIDELVSYLGDDEARVIVLTKTFDFTDSEGTTTG ------------------------------------------------------------ TGCAPWGTASACQVAIDQDDWCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGA --1--------2---------1-------------------------------------- IKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYV ------------------------------------------------------------ LGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKV -------------------------2---------------------------------- QDNTLLHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQNVDTVLETYEGEAFTVPSSTAGE ------------------------------------------------------------ VCSTYLGRDCVINGFGSSGTFSEDSTSFLSDFEGKNIASASAYTSVASRVVANAGQGNL -3-------3------------------------------------------------- >NEURAL CELL ADHESION MOLE; SWP:P13590; PDB:1IE5A; GKDIQVIVNVPPSVRARQSTMNATANLSQSVTLACDADGFPEPTMTWTKDGEPIEQEDNE ----------------------------------1------------------------- EKYSFNYDGSELIIKKVDKSDEAEYICIAENKAGEQDATIHLKVFAK --------------------------1-------------------- >IMPERATOXIN A; SWP:P59868; PDB:1IE6A; GDCLPHLKRCKADNDCCGKKCKRRGTNAEKRCR --1------2-----31---2----------3- >BRUC.D4.4; SWP:NA; PDB:1IEHA; DVQLQASGGGLVQPGGSLRVSCAASGFTFSSYHMAWVRQAPGKGLEWVSTINPGDGSTYY ---------------------1-------------------------------------- ADSVKGRFTISRDNAKNTLYLQMNSLKSEDTAVYYCAKYSGGALDAWGQGTQVTVSSQSE -----------------------------------1------------------------ QKLISEEDLNHHHHH --------------- >OVOTRANSFERRIN; SWP:P02789; PDB:1IEJA; KSVIRWCTISSPEEKKCNNLRDLTQQERISLTCVQKATYLDCIKAIANNEADAITLDGGQ ------1---------2---------------2--------1------------------ VFEAGLAPYKLKPIAAEVYEHTEGSTTSYYAVAVVKKGTEFTVNDLQGKTSCHTGLGRSA ---------------------------------------------------3-------- GWNIPIGTLLHRGAIEWEGIESGSVEQAVAKFFSASCVPGATIEQKLCRQCKGDPKTKCA ------------------------------------4----------5--4-------5- RNAPYSGYSGAFHCLKDGKGDVAFVKHTTVNENAPDQKDEYELLCLDGSRQPVDNYKTCN -------------3------------------------------6-------------6- WARVAAHAVVARDDNKVEDIWSFLSKAQSDFGVDTKSDFHLFGPPGKKDPVLKDLLFKDS ------------------------------------------------------------ AIMLKRVPSLMDSQLYLGFEYYSAIQSMR ----------------------------- >Ig heavy chain V region M; SWP:P01783; PDB:1IGCH; DVQLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTLHY ---------------------1-------------------------------------- ADTVKGRFTISRDNPKNTLFLQMTSLRSEDTGMYYCARWGNYPYYAMDYWGQGTSVTVSS -----------------------------------1------------------------ AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSD --------------------------2--------------------------------- LYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRDC ---------------------2-------------------- >INSULIN-LIKE GROWTH FACTO; SWP:P01344; PDB:1IGL; AYRPSETLCGGELVDTLQFVCGDRGFYFSRPASRVSRRSRGIVEECCFRSCDLALLETYC --------1-----------2------------------------31---3--------2 ATPAKSE ------- >IGM-KAPPA POT FV (HEAVY C; SWP:NA; PDB:1IGMH; EVHLLESGGNLVQPGGSLRLSCAASGFTFNIFVMSWVRQAPGKGLEWVSGVFGSGGNTDY ---------------------1-------------------------------------- ADAVKGRFTITRDNSKNTLYLQMNSLRAEDTAIYYCAKHRVSYVLTGFDSWGQGTLVTVS -----------------------------------1------------------------ SGSASAPTL --------- >DNA rearranged by a t(2; SWP:Q6LBV5; PDB:1IGML; DIQMTQSPSSLSASVGDRVTITCQASQDISNYLAWYQQKPGKAPELRIYDASNLETGVPS ----------------------1------------------------------------- RFSGSGSGTDFTFTISSLQPEDIATYYCQQYQNLPLTFGPGTKVDIKRTVAAPSV ---------------------------1--------------------------- >INSULIN-LIKE GROWTH FACTO; SWP:P08069; PDB:1IGRA; EICGPGIDIRNDYQQLKRLENCTVIEGYLHILLISKAEDYRSYRFPKLTVITEYLLLFRV --1------------------1-------------------------------------- AGLESLGDLFPNLTVIRGWKLFYNYALVIFEMTNLKDIGLYNLRNITRGAIRIEKNADLC -----------------------------------------------------------2 YLSTVDWSLILDAVSNNYIVGNKPPKECGDLCPGTMEEKPMCEKTTINNEYNYRCWTTNR ---------------------------2---3---------4------------3----- CQKMCPSTCGKRACTENNECCHPECLGSCSAPDNDTACVACRHYYYAGVCVPACPPNTYR 4---5---6----5-----67---8---7--------8--9--------9---a------ FEGWRCVDRDFCANILSAESSDSEGFVIHDGECMQECPSGFIRNGSQSMYCIPCEGPCPK -----a-----b--------------------b---c-------------c--d---d-- VCEEEKKTKTIDSVTSAQMLQGCTIFKGNLLINIRRGNNIASELENFMGLIEVVTGYVKI -e--------------------e------------------------------------- RHSHALVSLSFLKNLRLILGEEQLEGNYSFYVLDNQNLQQLWDWDHRNLTIKAGKMYFAF ------------------------------------------------------------ NPKLCVSEIYRMEEVTGTKGRQSKGDINTRNNGERASCEKEQKLISEEDLN ----f--------------------------------f------------- >IGG2A INTACT ANTIBODY - M; SWP:A0A5D8; PDB:1IGTA; DIVLTQSPSSLSASLGDTITITCHASQNINVWLSWYQQKPGNIPKLLIYKASNLHTGVPS ----------------------1------------------------------------- RFSGSGSGTGFTLTISSLQPEDIATYYCQQGQSYPLTFGGGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >HYPOTHETICAL PROTEIN MTH9; SWP:NA; PDB:1IHNA; SHFSDCRFGSVTYRGREYRSDIVVHVDGSVTPRRKEISRRKYGTSHVAEEELEELLEEKP -----1------------------------------------------------------ ESIIIGSGVHGALETGFRSDATVLPTCEAIKRYNEERSAGRRVAAIIHVTC --------------------------1------------------------ >PHYTASE; SWP:P34752; PDB:1IHP; SCDTVDQGYQCFSETSHLWGQYAPFFSLANESVISPEVPAGCRVTFAQVLSRHGARYPTD -1--------1------------------------------2------------------ SKGKKYSALIEEIQQNATTFDGKYAFLKTYNYSLGADDLTPFGEQELVNSGIKFYQRYES ------------------------------------------------------------ LTRNIVPFIRSSGSSRVIASGKKFIEGFQSTKLKDPRAQPGQSSPKIDVVISEASSSNNT ------------------------------------------------------------ LDPGTCTVFEDSELADTVEANFTATFVPSIRQRLENDLSGVTLTDTEVTYLMDMCSFDTI -----3------------------------------------------------4----- STTKLSPFCDLFTHDEWINYDYLQSLKKYYGHGAGNPLGPTQGVGYANELIARLTHSPVH --------4--------------------------------------------------- DDTSSNHTLDSSPATFPLNSTLYADFSHDNGIISILFALGLYNGTKPLSTTTVENITQTD ------------------------------------------------------------ GFSSAWTVPFASRLYVEMMQCQAEQEPLVRVLVNDRVVPLHGCPVDALGRCTRDSFVRGL --------------------2---------------------5-------5--------- SFARSGGDWAECFA -----------3-- >PLASMA RETINOL-BINDING PR; SWP:P41263; PDB:1IIUA; MDCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRV --1--------------------------------------------------------- RLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCR --------2-------------------------------------------------3- ELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHNGFCS -------3------------------------------1-------------2- >LYSOZYME; SWP:Q7SID7; PDB:1IIZA; KRFTRCGLVNELRKQGFDENLMRDWVCLVENESARYTDKIANVNKNGSRDYGLFQINDKY -----1--------------------2--------------------------------- WCSKGSTPGKDCNVTCSQLLTDDITVASTCAKKIYKRTKFDAWSGWDNHCNHSNPDISSC -3---------4---3-------------4-------------------2---------1 >VON WILLEBRAND FACTOR; SWP:P04275; PDB:1IJBA; SEPPLHDFYCSRLLDLVFLLDGSSRLSEAEFEVLKAFVVDMMERLRVSQKWVRVAVVEYH ---------1-------------------------------------------------- DGSHAYIGLKDRKRPSELRRIASQVKYAGSQVASTSEVLKYTLFQIFSKIDRPEASRIAL ------------------------------------------------------------ LLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPHANLKQIRLIEKQAPENKAFVLSS ------------------------------------------------------------ VDELEQQRDEIVSYLCDLAPEA ---------------1------ >PHOSPHOLIPASE A2; SWP:Q7SID6; PDB:1IJLA; SLIQFETLIMKVVKKSGMFWYSAYGCYCGWGGHGRPQDATDRCCFVHDCCYGKVTGCDPK -------------------------1-2--------------32----45------6--- MDSYTYSEENGDIVCGGDDPCKREICECDRVAADCFRDNLDTYNSDTYWRYPRQDCEESP --------------7-----6----7-5------3--------------------1---- EPC --4 >LOW-DENSITY LIPOPROTEIN R; SWP:P01130; PDB:1IJQA; IAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLY ------------------------------------------------------------ DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVD ------------------------------------------------------------ PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI ------------------------------------------------------------ SSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAEN ------------------------------------------------------------ LLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLA ---------------------1---------2---1--------------2-3------- RDMRSCLT -----3-- >SECRETED FRIZZLED-RELATED; SWP:P97401; PDB:1IJXA; AACEPVRIPLCKSLPWEMTKMPNHLHHSTQANAILAMEQFEGLLGTHCSPDLLFFLCAMY --1-------2------------------------------------3--------2--- APICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPESLACDELPVYDRGVCISPEA ---1-----------4---5------3----------------5----------4----- IVTAD ----- >FRIZZLED HOMOLOG 8; SWP:Q61091; PDB:1IJYA; ELACQEITVPLCKGIGYEYTYMPNQFNHDTQDEAGLEVHQFWPLVEIQCSPDLKFFLCSM ---1-------2------------------------------------3--------2-- YTPICLEDYKKPLPPCRSVCERAKAGCAPLMRQYGFAWPDRMRCDRLPEQGNPDTLCMDY ----1----------4---5------3----------------5------------4--- ER -- >n/a; SWP:NA; PDB:1IKFH; EVKLVESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQNSEKRLEWVAFISNGGGSAFY ---------------------1-------------------------------------- ADIVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCTRHTLYDTLYGNYPVWFADWGQGT -----------------------------------1------------------------ LVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFP --------------------------------2--------------------------- AVLQSDLYTLSSSVTVPSSSRPSETVTCNVAHPASSTKVDKKIVPRDC ---------------------------2-------------------- >Ephrin-B2 [Precursor]; SWP:P52800; PDB:1IKOP; SIVLEPIYWNSSNSKFLPGQGLVLYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQA -----------------------------------1------------------------ DRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNKDYYIISTSNGSLEGLD --2-----------1--------------------------------------------- NQEGGVCQTRAMKILMKVGQD ------2-------------- >EXOTOXIN A; SWP:P11439; PDB:1IKPA; EEAFDLWNECAKACVLDLKDGVRSSRMSVDPAIADTNGQGVLHYSMVLEGGNDALKLAID ---------1---1---------------------------------------------- NALSITSDGLTIRLEGGVEPNKPVRYSYTRQARGSWSLNWLVPIGHEKPSNIKVFIHELN ------------------------------------------------------------ AGNQLSHMSPIYTIEMGDELLAKLARDATFFVRAHESNEMQPTLAISHAGVSVVMAQKRW ------------------------------------------------------------ SEWASGKVLCLLDQLDGVYNYLAQQRCNLDDTWEGKIYRVLAGNPAKHDLDIKPTVISHR ---------2----------------2--------------------------------- LHFPEGGSLAALTAHQACHLPLETFTRHRQPRGAEQLEQCGYPVQRLVALYLAARLSWNQ -----------------3---------------------3-------------------- VDQVIRNALASPGSGGDLGEAIREQPEQARLALTLAAAESERFVRQGTGNDEAGAANADV ------------------------------------------------------------ VSLTCPVAAGECAGPADSGDALLERNYPTGAEFLGDGGDVSFSTRGTQNWTVERLLQAHR ----4------4------------------------------------------------ QLEERGYVFVGYHGTFLEAAQSIVFGGVRARSQDLDAIWRGFYIAGDPALAYGYAQDQEP ------------------------------------------------------------ DARGRIRNGALLRVYVPRSSLPGFYRTSLTLAAPEAAGEVERLIGHPLPLRLDAITGPEE ------------------------------------------------------------ EGGRLETILGWPLAERTVVIPSAIPTDPRNVGGDLDPSSIPDKEQAISALPDYASQPGK ----------------------------------------------------------- >MONOCLONAL ANTIBODY G3-51; SWP:Q52L64; PDB:1IL1A; QLQQSGAELVRSGASVKLSCATSDFNIKDYYIHWVRQRPEQGLEWIGWLDPENGDTESAP -------------------1---------------------------------------- KFQGKATMTADTSSNTAYLQLSSLTSEASAVYYCNAISTTRDYYALDYWGQGTSVTVSSA ---------------------------------1-------------------------- KTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDL -------------------------2---------------------------------- YTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR --------------------2------------------ >Interleukin-1 receptor an; SWP:P18510; PDB:1ILR1; SKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHALFLGIHGGKMCL ------------------------------------------------------------ SCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEA -1----------------------------------------------1----------- DQPVSLTNMPDEGVMVTKFYFQEDE ------------------------- >Unique short US2 glycopro; SWP:P09713; PDB:1IM3D; PWFQIEDNRCYIDNGKLFARGSIVGNMSRFVFDPKADYGGVGENLYVHADDVEFVPGESL ---------1-------------------------------------------------- KWNVRNLDVMPIFETLALRLVLQGDVIWLRCVPEL ------------------------------1---- >IGG1-LAMBDA CHA255 FAB (H; SWP:NA; PDB:1INDH; EVTLVESGGDSVKPGGSLKLSCAASGFTLSGETMSWVRQTPEKRLEWVATTLSGGGFTFY ---------------------1-------------------------------------- SASVKGRFTISRDNAQNNLYLQLNSLRSEDTALYFCASHRFVHWGHGTLVTVSAKTTPPS -----------------------------------1------------------------ VYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLESDLYTLSSS -------------------2---------------------------------------- VTVPSSPRPSETVTCNVAHPASSTKVDKKIVPR --------------2------------------ >ARCELIN-5A; SWP:Q42460; PDB:1IOAA; ATETSFNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKD ------------------------------------------------------------ SNNVASFNTNFTFIIRAKNQSISAYGLAFALVPVNSPPQKKQEFLGIFNTNNPEPNARTV ------------------------------------------------------------ AVVFNTFKNRIDFDKNFIKPYVNENCDFHKYNGEKTDVQITYDSSNNDLRVFLHFTVSQV -------------------------1---------------------------------- KCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDVLSWSFSSKFR -1---------------------------------------------- >SF11-RNASE; SWP:Q7SID5; PDB:1IOOA; DFEYLQLVLTWPASFCYANHCERIAPNNFTIHGLWPDNVKTRLHNCKPKPTYSYFTGKML ---------------1----1------------------------2-------------- NDLDKHWMQLKFEQDYGRTEQPSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLLRT ---------------------------------2-------------------------- LQTHRIIPGSSYTFQDIFDAIKTVSQENPDIKCAEVTKGTPELYEIGICFTPNADSMFRC --------------------------------3---------------4----------4 PQSDTCDKTAKVLFRR -----3---------- >OVOTRANSFERRIN; SWP:P02789; PDB:1IQ7A; RIQWCAVGKDEKSKCDRWSVVSNGDVECTVVDETKDCIIKIMKGEADAVALDGGLVYTAG ----1---------2------------2--------1----------------------- VCGLVPVMAERYDDESCSKDERPASYFAVAVARKDSNVNWNNLKGKKSCHTAVGRTAGWV -3--------------4-------------------------------5----------- IPMGLIHNRTGTCNFDEYFSEGCAPGSPPNSRLCQLCQGSGGIPPEKCVASSHEKYFGYT ------------6---------7----------8--7----------8------------ GALRCLVEKGDVAFIQHSTVEENTGGKNKADWAKNLQMDDFELLCTDGRRANVMDYRECN ----5---------------------------------------9-------------9- LAEVPTHAVVVRPEKANKIRDLLERQEKRFGVNGSEKSKFMMFESQNKDLLFKDLTKCLF ---------------------------------------------------------4-- KVREGTTYKEFLGDKFYTVISSLKTCNPSDILQMCSFLEGK -------------------------6--------3------ >ALPHA-NEUROTOXIN; SWP:P01426; PDB:1IQ9A; LECHNQQSSQPPTTKTCPGETNCYKKVWRDHRGTIIERGCGCPTVKPGIKLNCCTTDKCN --1-------------2-----1----------------2-3----------34----4- N - >S3-RNASE; SWP:O80323; PDB:1IQQA; YDYFQFTQQYQLAVCNSNRTLCKDPPDKLFTVHGLWPSNMVGPDPSKCPIKNIRKREKLL --------------1------1-------------------------2------------ EHQLEIIWPNVFDRTKNNLFWDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRI ------------------------------2----------------------------- LSKAKIEPDGKKRALLDIENAIRNGADNKKPKLKCQKKGTTTELVEITLCSDKSGEHFID ----------------------------------3--------------4---------- CPHPFEPISPHYCPTNNIKY 4-----------3------- >ANTIBODY M-HFE7A, LIGHT C; SWP:NA; PDB:1IQWH; QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMQWVKQRPGQGLEWIGEIDPSDSYTNY ---------------------1-------------------------------------- NQKFKGKATLTVDTSSSTAYMQLSSLTSEDSAVYYCARNRDYSNNWYFDVWGTGTTVTVS -----------------------------------1------------------------ SAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQS ---------------------------2-------------------------------- DLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPR ----------------------2------------------ >Igk-V21-4 protein; SWP:A0A5E6; PDB:1IQWL; DIVLTQSPASLAVSLGQRATISCKASQSVDYDGDSYMNWYQQKPGQPPKLLIYAASNLES ----------------------1------------------------------------- GIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSNEDPRTFGGGTKLEIKRADAAPTVS -------------------------------1---------------------------- IFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMS -----------------2------------------------------------------ STLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR -----------------2----------------- >TISSUE FACTOR PATHWAY INH; SWP:P10646; PDB:1IRHA; EFHGPSWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKK -------1--------2---------------3-------2------------3---1-- G - >INTERLEUKIN-2; SWP:P60568; PDB:1IRL; APTSSSTKKTQLQLEHLLLDLQMILNGINNYKNPKLTRMLTAKFYMPKKATELKHLQCLE ---------------------------------------------------------1-- EELKPLEEVLNLAQSKNFHLRPRDLISNINVIVLELKGSETTFMCEYADETATIVEFLNR --------------------------------------------1--------------- WITFCQSIISTLT ------------- >Proteasome subunit alpha ; SWP:P25788; PDB:1IRUG; SSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEE ----------------------------------------1------------------- GSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVH ------------------------------------------------------------ AYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQ ------------------------------------------------------------ MKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIVPKDIREEAEKYAK -----1------------------------------------------------------ ESLKE ----- >Proteasome subunit beta t; SWP:P20618; PDB:1IRUM; RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGD -----------------------------------------------------1------ CLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGA 1----------------------------------------------------------- VYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFI ------------------------------------------------------------ SAAERDVYTGDALRICIVTKEGIREETVSLRKD --------------------------------- >BONE MARROW STROMAL CELL ; SWP:Q10588; PDB:1ISIA; WRAEGTSAHLRDIFLGRCAEYRALLSPEQRNKDCTAIWEAFKVALDKDPCSVLPSDYDLF -----------------1---------------1---------------2---------- ITLSRHSIPRDKSLFWENSHLLVNSFADNTRRFMPLSDVLYGRVADFLSWCRQKADSGLD --------------------------------------------------3--------- YQSCPTSEDCENNPVDSFWKRASIQYSKDSSGVIHVMLNGSEPTGAYPIKGFFADYEIPN ---3-----2-------------------------------------------------- LQKEKITRIEIWVMHEIGGPNVESCGEGSMKVLEKRLKDMGFQYSCINDYRPVKLLQCVD ------------------------4--------------------4-----------5-- HSTHPDCALK ------5--- >HUMANIZED ANTIBODY HFE7A,; SWP:NA; PDB:1IT9H; QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYWMQWVKQAPGQGLEWMGEIDPSDSYTNY ---------------------1-------------------------------------- NQKFKGKATLTVDTSTSTAYMELSSLRSEDTAVYYCARNRDYSNNWYFDVWGEGTLVTVS -----------------------------------1------------------------ SASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS ---------------------------2-------------------------------- SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV -----------------------2--------------- >HUMANIZED ANTIBODY HFE7A,; SWP:NA; PDB:1IT9L; EIVLTQSPGTLSLSPGERATLSCKASQSVDYDGDSYMNWYQQKPGQAPRLLIYAASNLES ----------------------1------------------------------------- GIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQSNEDPRTFGQGTKLEIKRTVAAPSVF -------------------------------1---------------------------- IFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLS -----------------2------------------------------------------ STLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN -----------------2---------------- >Interleukin-1 receptor ty; SWP:P14778; PDB:1ITBB; CKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLW 1--------------------2-------------------------------------- FVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVC -------------2-------1----------------3--------------------4 PYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTY ---------------------3-------------------------------4------ LGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKW ---------------------------------------------5-------------- NGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDA -------------------------------------------------5---------- AYIQLIYPVT ---------- >RENAL DIPEPTIDASE; SWP:P16444; PDB:1ITUA; DFFRDEAERIMRDSPVIDGHNDLPWQLLDMFNNRLQDERANLTTLAGTHTNIPKLRAGFV ------------------------------------------------------------ GGQFWSVYTPCDTQNKDAVRRTLEQMDVVHRMCRMYPETFLYVTSSAGIRQAFREGKVAS ----------1------------------------------------------------- LIGVEGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDSEPQSQGLSPFG ---------------------------------1-------------------------- QRVVKELNRLGVLIDLAHVSVATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLV ---------------------------------------------2-------------- KQTDSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLE -----------------2------------------------------------------ DVSKYPDLIAELLRRNWTEAEVKGALADNLLRVFEAVEQASNLTQAPEEEPIPLDQLGGS ------------------------------------------------------------ CRTHYGYSS --------- >MMP9; SWP:P14780; PDB:1ITVA; DDACNVNIFDAIAEIGNQLYLFKDGKYWRFSEGRGSRPQGPFLIADKWPALPRKLDSVFE ---1-------------------------------------------------------- EPLSKKLFFFSGRQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGRRL ------------------------------------------------------------ WRFDVKAQMVDPRSASEVDRMFPGVPLDTHDVFQFREKAYFCQDRFYWRVSSRSELNQVD ------------------------------------------------------------ QVGYVTYDILQCPED -----------1--- >GLYCOSYL HYDROLASE; SWP:P20533; PDB:1ITXA; LQPATAEAADSYKIVGYYPSWAAYGRNYNVADIDPTKVTHINYAFADICWNGIHGNPDPS ------------------------------------------------1----------- GPNPVTWTCQNEKSQTINVPNGTIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLKQTN --------1--------------------------------------------------- PNLKTIISVGGWTWSNRFSDVAATAATREVFANSAVDFLRKYNFDGVDLDWEYPVSGGLD ------------------------------------------------------------ GNSKRPEDKQNYTLLLSKIREKLDAAGAVDGKKYLLTIASGASATYAANTELAKIAAIVD ------------------------------------------------------------ WINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFNVAAGAQGHLDAGVPAAKLV ------------------------------------------------------------ LGVPFYGRGWDGCAQAGNGQYQTCTGGSSVGTWEAGSFDFYDLEANYINKNGYTRYWNDT ------------2----------2------------------------------------ AKVPYLYNASNKRFISYDDAESVGYKTAYIKSKGLGGAMFWELSGDRNKTLQNKLKADL ----------------------------------------------------------- >MALTOOLIGOSYL TREHALOSE S; SWP:Q53688; PDB:1IV8A; MISATYRLQLNKNFNFGDVIDNLWYFDLGVSHLYLSPVLMASPGSNHGYDVIDHSRINDE ------------------------------------------------------------ LGGEKEYRRLIETAHTIGLGIIQDIVPNHMAVNSLNWRLMDVLMGSYYTYFDFFPEDDKI ------------------------------------------------------------ RLPILGEDLDTVISKGLLKIVKDGDEYFLEYFKWKLPLTEVGNDIYDTLQKQNYTLMSWK ------------------------------------------------------------ NPPSYRRFFDVNTLIGVNVEDHVFQESHSILDLDVDGYRIDHIDGLYDPEKYINDLRSII ------------------------------------------------------------ KNIIIVEKILGFQEELKLNSDGTTGYDFLNYSNLLFNFNQEIMDSIYENFTAEKISISES ------------------------------------------------------------ IKIKAQIIDELFSYEVRLASQLGISYDILRDYLSCIDVYRTYANQIVKECDKTNEIEEAT ----------------------------------1--------------1---------- KRNPEAYTKLQQYMPAVYAAYEDTFLFRYNRLISINEVGSDLRYYKISPDQFHVFNQKRR ------------------------------------------------------------ GKITLNATSTHDTKFSEDVRMKISVLSEFPEEWKNVEEWHSIINPKVSRNDEYRYYQVLV ------------------------------------------------------------ GSFYEGFSNDFERIQHMISVREAINTSWRNQNKEYENRVMELVEETFTNKDFIKSFMKFE ------------------------------------------------------------ SIRRIGMIKSLSLVALKIMSAGIPDFYQGTEIWRYLLTDPDNRVPVDFKKLHEILEKSKF ------------------------------------------------------------ EKNMLESMDDGRIKMYLTYLLSLRKQLAEDFLKGEYKGLDLEEGLCGFIRFNKILVIIKT ------------------------------------------------------------ KGSVNYKLKLEEGAIYTDVLTGEEIKKEVQINELPRILVRM ----------------------------------------- >OMEGA-AGATOXIN-IVA; SWP:P30288; PDB:1IVA; KKKCIAKDYGRCKWGGTPCCRGRGCICSIMGTNCECKPRLIMEGLGLA ---1-------2------31----2-4------4-3------------ >ISOVALERYL-COA DEHYDROGEN; SWP:P26440; PDB:1IVHA; VDDAINGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITA ------------------------------------------------------------ PVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLI ------------------------------------------------------------ SGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLA ------------------------------------------------------------ AVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVY ------------------------------------------------------------ VLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLM ------------------------------------------------------------ ACRQYVYNVAKACDEGHCTAKDCAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFL ------------1----1------------------------------------------ RDAKLYEIGAGTSEVRRLVIGRAFNAD --------------------------- >IGG-KAPPA M29B FV (LIGHT ; SWP:NA; PDB:1IVLA; DIELTQSPATLSVTPGNSVSISCRASQSIGNRLFWYQQKSHESPRLLIKYASQSISGIPS ----------------------1------------------------------------- RFSGSGSGTDFTLSINSVETEDLAVYFCQQVSEWPFTFGGGTKLEIK ---------------------------1------------------- >LYSOZYME M; SWP:P08905; PDB:1IVMA; KVYERCEFARTLKRNGMAGYYGVSLADWVCLAQHESNYNTRATNYNRGDQSTDYGIFQIN -----1-----------------------2------------------------------ SRYWCNDGKTPRAVNACGINCSALLQDDITAAIQCAKRVVRDPQGIRAWVAWRAHCQNRD ----3-----------4---3-------------4--------------------2---- LSQYIRNCGV -------1-- >EPIDERMAL GROWTH FACTOR R; SWP:P00533; PDB:1IVOA; EEKKVCQGTSNKLTQLGTFEDHFLSLQRMFNNCEVVLGNLEITYVQRNYDLSFLKTIQEV -----1--------------------------1--------------------------- AGYVLIALNTVERIPLENLQIIRGNMYYENSYALAVLSNYDANKTGLKELPMRNLQEILH ------------------------------------------------------------ GAVRFSNNPALCNVESIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEE -----------2-----------------------------2--3---4----3------ NCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCP -4-------5---6---5-------67---8---7-------8--9--------9---a- PLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRK -------------------------a---b-----------b---c-------------- CKKCEGPCRKVCNGIGIGEFKDSLSINATNIKHFKNCTSISGDLHILPVAFRGDSFTHTP c--d---d---e------------------------e----------------------- PLDPQELDILKTVKEITGFLLIQAWPENRTDLHAFENLEIIRGRTKQHGQFSLAVVSLNI ------------------------------------------------------------ TSLGLRSLKEISDGDVIISGNKNLCYANTINWKKLFGTSGQKTKIISNRGENSCKATGQV ------------------------f----------------------------f------ CHALCSPEGCWGPEPRDCVSCRNVSRGRECV g---h----g-------h--i--------i- >HUMAN PROTECTIVE PROTEIN; SWP:P10619; PDB:1IVYA; APDQDEIQRLPGLAKQPSFRQYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGC -----------------------------------------------------------1 SSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTE ------------------------------------------------------------ VAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL ------------------------------------------------------------ SSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQEVARIVG -------------------------------23----3---------2------------ NSGLNIYNLYAPCAGGVPSHFRYEKDTVVVQDLGNIFTRLPLKRMWHQALLRSGDKVRMD ------------4----------------------------------------------- PPCTNTTAASTYLNNPYVRKALNIPEQLPQWDMCNFLVNLQYRRLYRSMNSQYLKLLSSQ --4------------------------------1-------------------------- KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIA ------------------------------------------------------------ FLTIKGAGHMVPTDKPLAAFTMFSRFLNKQPY -------------------------------- >TRYPSIN INHIBITOR; SWP:P16589; PDB:1IW4A; AHMDCTEFNPLCRCNKMLGDLICAVIGDAKEEHRNMCALCCEHPGGFEYSNGPCE ----1------2-3--------4-------------3--12------------4- >ERVATAMIN B; SWP:P60994; PDB:1IWDA; LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTAS ---------------------1---------------------------------2---- HGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQGSCKPYRLRVVSINGFQRVTRNNESAL --1--------------------------------2------------------------ QSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQNHGVVIVGYGTQSGKNYWIVRNSW -------------------------------3---------------------------- GQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTKA ----------------------3------------ >METHYLTRANSFERASE; SWP:O50082; PDB:1IXKA; LSPSLDKLLRLGYSKLFADRYFQLWGERAIRIAEAEKPLPRCFRVNTLKISVQDLVKRLN -----------------------------------------1------------------ KKGFQFKRVPWAKEGFCLTREPFSITSTPEFLTGLIYIQEASSYPPVALDPKPGEIVADA ----------------1------------------------------------------- AAPGGKTSYLAQLRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVE ------------------------------------------------------------ FDKILLDAPCTGSGTIHRTDDIKFCQGLQRLLEKGLEVLKPGGILVYSTCSLEPEENEFV ---------2---------------------------------------2---------- IQWALDNFDVELLPLKYGEPALTNPFGIELSEEIKNARRLYPDVHETSGFFIAKIRKL ---------------------------------------------------------- >COAGULATION FACTORS IX/X-; SWP:P23806; PDB:1IXXA; DCLSGWSSYEGHCYKAFEKYKTWEDAERVCTEQAKGAHLVSIESSGEADFVAQLVTQNMK -1----------1----------------2------------------------------ RLDFYIWIGLRVQGKVKQCNSEWSDGSSVSYENWIEAESKTCLGLEKETDFRKWVNIYCG -----------------------------------------3----------------3- QQNPFVCEA ------2-- >RIBONUCLEASE; SWP:Q7XZV5; PDB:1IYBA; FAQDFDFFYFVQQWPGSYCDTKQSCCYPKTGKPASDFGIHGLWPNNNDGSYPSNCDSNSP ------------------1-----12----------------------------3----- YDQSQVSDLISRMQQNWPTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALDLKN ---------------------2------------------3------------------- QINLLEILQGAGIHPDGGFYSLNSIKNAIRSAIGYAPGIECNVDESGNSQLYQIYICVDG ----------------------------------------4---------------5--- SGSNLIECPIFPRGKCGSSIEFPTF -------5-------4--------- >GLUTAREDOXIN-LIKE PROTEIN; SWP:O57917; PDB:1J08A; GLISEEDKRIIKEEFFSKMVNPVKLIVFIGKEHCQYCDQLKQLVQELSELTDKLSYEIVD ---------------------------------1--1----------------------- FDTPEGKELAEKYRIDRAPATTITQDGKDFGVRYFGIPAGHEFAAFLEDIVDVSKGDTDL ------------------------------------------------------------ MQDSKEEVSKIDKDVRILIFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY ------------------------2--2-------------------------------- PEWADQYNVMAVPKIVIQVNGEDKVQFEGAYPEKMFLEKLLSALS --------------------------------------------- >MOLT-INHIBITING HORMONE; SWP:P55847; PDB:1J0TA; ASFIDNTCRGVMGNRDIYKKVVRVCEDCTNIFRLPGLDGMCRNRCFYNEWFLICLKAANR -------1----------------2--3------------2---1--------3------ EDEIEKFRVWISILNAGQ ------------------ >ANTIVIRAL PROTEIN S; SWP:P23339; PDB:1J1QA; INTITFDAGNATINKYATFMESLRNEAKDPSLKCYGIPMLPNTNSTIKYLLVKLQGASLK ---------------------------------1-------------------------- TITLMLRRNNLYVMGYSDPYDNKCRYHIFNDIKGTEYSDVENTLCPSSNPRVAKPINYNG -----------------------2--------------------2--------------- LYPTLEKKAGVTSRNEVQLGIQILSSDIGKISGQGSFTEKIEAKFLLVAIQMVSEAARFK ------------------------------------------------------------ YIENQVKTNFNRDFSPNDKVLDLEENWGKISTAIHNSKNGALPKPLELKNADGTKWIVLR ------------------------------------------------------------ VDEIKPDVGLLNYVNGTCQAT -----------------1--- >ALGINATE LYASE; SWP:P84143; PDB:1J1TA; STIPSSITSGSIFDLEGDNPNPLVDDSTLVFVPLEAQHITPNGNGWRHEYKVKESLRVAM ------------------------------------------------------------ TQTYEVFEATVKVEMSDGGKTIISQHHASDTGTISKVYVSDTDESGFNDSVANNGIFDVY ------------------------------------------------------------ VRLRNTSGNEEKFALGTMTSGETFNLRVVNNYGDVEVTAFGNSFGIPVEDDSQSYFKFGN ------------------------------------------------------------ YLQSQDPYTLDKCGEAGNSNSFKNCFEDLGITESKVTMTNVTYTRETN ------------1-----------1----------------------- >DISINTEGRIN TRIFLAVIN; SWP:P21859; PDB:1J2LA; GEECDCGSPSNPCCDAATCKLRPGAQCADGLCCDQCRFKKKRTICRIARGDFPDDRCTGQ ---1-2------32----1-------4----54--3--------6-----------5--- SADCPRWN ---6---- >COAGULATION FACTOR IX-BIN; SWP:P23806; PDB:1J34A; DCPSGWSSYEGHCYKPFKLYKTWDDAERFCTEQAKGGHLVSIESAGEADFVAQLVTENIQ -1----------1----------------2------------------------------ NTKSYVWIGLRVQGKEKQCSSEWSDGSSVSYENWIEAESKTCLGLEKETGFRKWVNIYCG -----------------------------------------3----------------3- QQNPFVCEA ------2-- >Coagulation factor IX/fac; SWP:P23807; PDB:1J34B; DCPSDWSSYEGHCYKPFSEPKNWADAENFCTQQHAGGHLVSFQSSEEADFVVKLAFQTFG -1----------1----------------2------------------------------ HSIFWMGLSNVWNQCNWQWSNAAMLRYKAWAEESYCVYFKSTNNKWRSRACRMMAQFVCE -----------------------------------3--------------3-------2- FQA --- >Coagulation factor IX; SWP:P00741; PDB:1J34C; YNSGKLFVRGNLRCKKCSFARVFNTKTTFWKQYV -------------1--1----------------- >ANGIOTENSIN CONVERTING EN; SWP:Q10714; PDB:1J36A; IQAKEYLENLNKELAKRTNVETEAAWAYRSAITDENEKKKNEISAELAKFMKEVASDTTK ------------------------------------------------------------ FQWRSYQSEDLKRQFKALTKLGYAALPEDDYAELLDTLSAMESNFAKVKVCDYKDSTKCD --------------------------------------------------1-------1- LALDPEIEEVISKSRDHEELAYYWREFYDKAGTAVRSQFERYVELNTKAAKLNNFTSGAE ------------------------------------------------------------ AWLDEYEDDTFEQQLEDIFADIRPLYQQIHGYVRFRLRKHYGDAVVSETGPIPMHLLGNM ------------------------------------------------------------ WAQQWSEIADIVSPFPEKPLVDVSAEMEKQAYTPLKMFQMGDDFFTSMNLTKLPQDFWDK ------------------------------------------------------------ SIIEKPTDGRDLVCHASAWDFYLIDDVRIKQCTRVTQDQLFTVHHELGHIQYFLQYQHQP -------------2-----------------2---------------------------- FVYRTGANPGFHEAVGDVLSLSVSTPKHLEKIGLLKDYVRDDEARINQLFLTALDKIVFL ------------------------------------------------------------ PFAFTMDKYRWSLFRGEVDKANWNCAFWKLRDEYSGIEPPVVRSEKDFDAPAKYHISADV ------------------------3----------------------------------- EYLRYLVSFIIQFQFYKSACIKAGQYDPDNVELPLDNCDIYGSARAGAAFHNMLSMGASK -------------------4-----------------4---------------------- PWPDALEAFNGERIMSGKAIAEYFEPLRVWLEAENIKNNVHIGWITSNKCVSSHHHHH -------------------------------------------------3-------- >SEQA PROTEIN; SWP:P36658; PDB:1J3EA; PLGSAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLDAQAFAEATESLHGRTRVYFAADEQ ------------------------------------------------------------ TLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMIEHIMQSMQFPAELIEKVCGTI ------------------------------1--------------------1--- >APO-NEOCARZINOSTATIN; SWP:P01550; PDB:1J5HA; AAPTATVTPSSGLSDGTVVKVAGAGLQAGTAYDVGQCAWVDTGVLACNPADFSSVTADAN ------------------------------------1---------1------------- GSASTSLTVRRSFEGFLFDGTRWGTVDCTTAACQVGLSDAAGNGPEGVAISFN ---------------------------2----2-------------------- >BEKM-1 TOXIN; SWP:Q9BKB7; PDB:1J5JA; RPTDIKCSESYQCFPVCKSRFGKTNGRCVNGFCDCF ------1-----2---3----------1----2-3- >ASPARTIC PROTEINASE; SWP:Q00663; PDB:1J71A; SDVPTTLINEGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCK ----------------------------------------------1-----------1- QEGTFDPSSSSSAQNLNQDFSIEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTSVD ------------------------------------------------------------ QGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKY ------------------------------------------------------------ TGTLTALPVTSSVELRVHLGSINFDGTSVSTNADVVLDSGTTITYFSQSTADKFARIVGA ------------------------------------------------------------ TWDSRNEIYRLPSCDLSGDAVFNFDQGVKITVPLSELILKDSDSSICYFGISRNDANILG -------------2--------------------------------2------------- DNFLRRAYIVYDLDDKTISLAQVKYTSSSDISAL ---------------------------------- >VITAMIN D BINDING PROTEIN; SWP:P02774; PDB:1J78A; CKEFSHLGKEDFTSLSLVLYSRKFPSGTFEQVSQLVKEVVSLTEACCYDTRTSALSAKSC 1---------------------------------------------1------------2 ESNSPFPVHPGTAECCTKRKLCMAALKHQPQEFPTYVEPTNDEICEAFRKDPKEYANQFM --------------32-----3----------------------4--------------- WEYSTNYGQAPLSLLVSYTKSYLSMVGSCCTSASPTVCFLKERLQLKHLSLLTTLSNRVC ----------------------------54-------5---------------------6 SQYAAYGEKKSRLSNLIKLAQKVPTADLEDVLPLAEDITNILSKCCESASEDCMAKELPE --------------------------------------------76------7------- HTVKLCDNLSTKNSKFEDCCQEKTAMDVFVCTYFMPAAQLPELPDVELPTNKDVCDPGNT -----8------------98----------9-----------------------a----- KVMDKYTFELSRRTHLPEVFLSKVLEPTLKSLGECCDVEDSTTCFNAKGPLLKKELSSFI ----------------------------------ba-------b---------------- DKGQELCADYSENTFTEYKKKLAERLKAKLPDATPTELAKLVNKRSDFASNCCSINSPPL ------c--------------------------------------------dc------- YCDSEIDAELKNI -d----------- >MATRIX METALLOPROTEINASE ; SWP:P08253; PDB:1J7MA; SWMSTVGGNSGGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQG --------------1-------------2-----------1--------------2---- >LOW-DENSITY LIPOPROTEIN R; SWP:Q07954; PDB:1J8EA; GSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHANCTNQ ----1------2----1------3-----2----------3--- >T-cell receptor alpha cha; SWP:P01737; PDB:1J8HD; QSVTQLGSHVSVSEGALVLLRCNYSSSVPPYLFWYVQYPNQGLQLLLKYTSAATLVKGIN ---------------------1-------------------------------------- GFEAEFKKSETSFHLTKPSAHMSDAAEYFCAVSESPFGNEKLTFGTGTRLTIIPNIQNPD -----------------------------1------------------------------ PAVYQLRSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKTVLDMRSMDFKSNSAVAWSNKS -------------2---------------------------------------------- DFACANAFNNSIIPEDTF ---2-------------- >TRBC1 protein [Fragment]; SWP:Q8N2T6; PDB:1J8HE; VKVTQSSRYLVKRTGEKVFLECVQDMDHENMFWYRQDPGLGLRLIYFSYDVKMKEKGDIP ---------------------1-------------------------------------- EGYSVSREKKERFSLILESASTNQTSMYLCASSSTGLPYGYTFGSGTRLTVVEDLNKVFP -----------------------------1------------------------------ PEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVSTDPQPLKEQPA ----------------------2------------------------------------- LNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGR ---------------------------2-------------------------------- A - >LYMPHOTACTIN; SWP:P47992; PDB:1J8IA; VGSEVSDKRTCVSLTTQRLPVSRIKTYTITEGSLRAVIFITKRGLKVCADPQATWVRDVV ----------1------------------------------------1------------ RSMDRKSNTRNNMIQTKPTGTQQSTNTAVTLTG --------------------------------- >PYELONEPHRITIC ADHESIN; SWP:Q47450; PDB:1J8RA; WNNIVFYSLGDVNSYQGGNVVITQRPQFITSWRPGIATVTWNQCNGPEFADGFWAYYREY -------------------------------------------1---------------- IAWVVFPKKVTQNGYPLFIEVHNKGSWSEENTGDNDSYFFLKGYKWDERAFDAGNLCQKP --------------------------------------------------------1--- GEITRLTEKFDDIIFKVALPADLPLGDYSVKIPYTSGQRHFASYLGARFKIPYNVAKTLP ------------------------------------------------------------ RENELFLFKNIGG ------------- >MHC CLASS I RECOGNITION R; SWP:Q9JHN9; PDB:1JA3A; VKYWFCYGTKCYYFIMNKTTWSGCKANCQHYSVPIVKIEDEDELKFLQRHVIPEGYWIGL -----1----1------------2---3-------------------------------- SYDKKKKEWAWIDNGPSKFDMKSRGCVFLSKARIEDTDCNIPYYCICGKKLDKFP -------------------------4------------4-----2-3-------- >ALPHA-AMYLASE; SWP:P56634; PDB:1JAE; KDANFASGRNSIVHLFEWKWNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQ --------------------------1--------------------------------- PVSYIINTRSGDESAFTDMTRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHDGMNYP ----------------------1------------------------------------- AVPYGSGDFHSPCEVNNYQDADNVRNCELVGLRDLNQGSDYVRGVLIDYMNHMIDLGVAG ------------2-------------2--------------------------------- FRVDAAKHMSPGDLSVIFSGLKNLNTDYGFADGARPFIYQEVIDLGGEAISKNEYTGFGC ------------------------------------------------------------ VLEFQFGVSLGNAFQGGNQLKNLANWGPEWGLLEGLDAVVFVDNHDNQRTGGSQILTYKN ------------------------------------------------------------ PKPYKMAIAFMLAHPYGTTRIMSSFDFTDNDQGPPQDGSGNLISPGINDDNTCSNGYVCE ----------------------------------------------------3-----3- HRWRQVYGMVGFRNAVEGTQVENWWSNDDNQIAFSRGSQGFVAFTNGGDLNQNLNTGLPA ------------------------------------------------------------ GTYCDVISGELSGGSCTGKSVTVGDNGSADISLGSAEDDGVLAIHVNAKL ---4-----------4---------------------------------- >BETA-N-ACETYLHEXOSAMINIDA; SWP:Q9Y691; PDB:1JAKA; DRKAPVRPTPLDRVIPAPASVDPGGAPYRITRGTHIRVDDSREARRVGDYLADLLRPATG ------------------------------------------------------------ YRLPVTAHGHGGIRLRLAGGPYGDEGYRLDSGPAGVTITARKAAGLFHGVQTLRQLLPPA ------------------------------------------------------------ VEKDSAQPGPWLVAGGTIEDTPRYAWRSAMLDVSRHFFGVDEVKRYIDRVARYKYNKLHL ------------------------------------------------------------ HLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYYTKAEYKEIVRYAASRHLEVVPEIDM ------------------------------------------------------------ PGHTNAALASYAELNCDGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELAALTPGRY ---------------1------------------1------------------------- LHIGGDEAHSTPKADFVAFMKRVQPIVAKYGKTVVGWHQLAGAEPVEGALVQYWGLDRTG ------------------------------------------------------------ DAEKAEVAEAARNGTGLILSPADRTYLDMKYTKDTPLGLSWAGYVEVQRSYDWDPAGYLP ------------------------------------------------------------ GAPADAVRGVEAPLWTETLSDPDQLDYMAFPRLPGVAELGWSPASTHDWDTYKVRLAAQA ------------------------------------------------------------ PYWEAAGIDFYRSPQVPWT ------------------- >FERREDOXIN-NADP REDUCTASE; SWP:Q41736; PDB:1JB9A; SRSKVSVAPLHLESAKEPPLNTYKPKEPFTATIVSVESLVGPKAPGETCHIVIDHGGNVP ------------------------------------------------1----------- YWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCVRRAVYYDPETGK ------------------------------------------------------------ EDPSKNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLR -------------1---------------------------------------------- RMFMEDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSYLKQYPDNFRYDKALSREQKGKMY ------------------------------------------------------------ VQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPGIQDTLKKVAERRGESWDQKLAQLKKNK ------------------------------------------------------------ QWHVEVY ------- >COCHLIN; SWP:O43405; PDB:1JBIA; TAPIAITCFTRGLDIRKEKADVLCPGGCPLEEFSVYGNIVYASVSSICGAAVHRGVISNS -------1---------------1---2-------------------2------------ GGPVRVYSLPGRENYSSVDANGIQSQMLSRWSASFTVTLE ---------------------------------------- >CD3 Epsilon and gamma Ect; SWP:P22646; PDB:1JBJA; DDAENIEYKVSISGTSVELTCPLDSDENLKWEKNGQELPQKHDKHLVLQDFSEVEDSGYY --------------------1--------------------------------------- VCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSR -1---------------------------------------------------------- GDGSVLLTCGLTDKTIKWLKDGSIISPLNATKNTWNLGNNAKDPRGTYQCQGAKETSNPL --------2----------------------------------------2---------- QVYYRM ------ >CYSTATHIONINE BETA-SYNTHA; SWP:P35520; PDB:1JBQA; WIRPDAPSRCTWQLGRPASESPHHHTAPAKSPKILPDILKKIGDTPMVRINKIGKKFGLK ------------------------------------------------------------ CELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPTSGNTGIGLALAAAVRG ------------------------------------------------------------ YRCIIVMPEKMSSEKVDVLRALGAEIVRTPTESHVGVAWRLKNEIPNSHILDQYRNASNP ------------------------------------------------------------ LAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAE ------------------------------------------1--1-------------- PEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGS ------------------------------------------------------------ AGSTVAVAVKAAQELQEGQRCVVILPDSVRNYMTKFLSDRWMLQKGFL ------------------------------------------------ >VENOM BASIC PROTEASE INHI; SWP:P25660; PDB:1JC6A; KNRPTFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCAAK ------1--------2---------------3-------2------------3---1--- YGRSS ----- >TECHYLECTIN-5A; SWP:Q9U8W8; PDB:1JC9A; DPTDCADILLNGYRSSGGYRIWPKSWMTVGTLNVYCDMETDGGGWTVIQRRGNYGNPSDY ----1------------------------------1------------------------ FYKPWKNYKLGFGNIEKDFWLGNDRIFALTNQRNYMIRFDLKDKENDTRYAIYQDFWIEN ------------------------------------------------------------ EDYLYCLHIGNYSGDAGNSFGRHNGHNFSTIDKDHDTHETHCAQTYKGGWWYDRCHESNL -----------------------------------------2------------2----- NGLYLNGEHNSYADGIEWRAWKGYHYSLPQVEMKIRPVEF ---------------------------------------- >Tryptophan biosynthesis p; SWP:P00909; PDB:1JCMP; MQCVLAKIVADKAIWVEARKQQQPLASFQNEVQPSTRHFYDALQGARTAFILECKKASPS --1--------------------------------------------------------- KGVIRDDFDPARIAAIYKHYASAISVLTDEKYFQGSFNFLPIVSQIAPQPILCKDFIIDP ------------------------------------------------------------ YQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKV ------------------------------------------------------------ VGINNRDLCDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHFANGFLIGSALM --------1--------------------------------------------------- AHDDLHAAVRRVLLGENKV ------------------- >ATRIAL NATRIURETIC PEPTID; SWP:P17342; PDB:1JDNA; PQKIEVLVLLPQDDSYLFSLTRVRPAIEYALRSVEGLPPGTRFQVAYEDSDCGNRALFSL ---------------------------------------------------1-------- VDRVAAARGAKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTR -------------------1---------------------------------------- VAPAYAKMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSF ------------------------------------2----------------------- DETKDLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSSS ------------------------2----------------------------------- YGDGSWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNM ------------------------------------------------------------ FVEGFHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDF ------------------------------------------------------------ SVIAMTDVEAGTQEVIGDYFGKEGRFEMRPNVKYPWGPLKLRIDENR ----------------------------------------------- >MHC CLASS I CHAIN-RELATED; SWP:NA; PDB:1JE6A; MEPHSLRYNLMVLSQDGSVQSGFLAEGHLDGQPFLRYDRQKRRAKPQGQWAEDVLGAETW ------------------------------------------------------------ DTETEDLTENGQDLRRTLTHIKDQKGGLHSLQEIRVCEIHEDSSTRGSRHFYYNGELFLS ------------------------------------1----------------------- QNLETQESTVPQSSRAQTLAMNVTNFWKEDAMKTKTHYRAMQADCLQKLQRYLKSGVAIR --------------------------------------------1--------------- RTVPPMVNVTCSEVSEGNITVTCRASSFYPRNITLTWRQDGVSLSHNTQQWGDVLPDGNG ----------------------2------------------------------------- TYQTWVATRIRQGEEQRFTCYMEHSGNHGTHPVPS -------------------2--------------- >CUCUMBER STELLACYANIN; SWP:P29602; PDB:1JER; MQSTVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDA ------------------------------------------------------------ CNFVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVAAN 1----------------------------------1-------------- >OLIGO-PEPTIDE BINDING PRO; SWP:P06202; PDB:1JETA; ADVPAGVQLADKQTLVRNNGSEVQSLDPHKIEGVPESNVSRDLFEGLLISDVEGHPSPGV ------------------------------------------------------------ AEKWENKDFKVWTFHLRENAKWSDGTPVTAHDFVYSWQRLADPNTASPYASYLQYGHIAN ------------------------------------------------------------ IDDIIAGKKPATDLGVKALDDHTFEVTLSEPVPYFYKLLVHPSVSPVPKSAVEKFGDKWT ------------------------------------------------------------ QPANIVTNGAYKLKNWVVNERIVLERNPQYWDNAKTVINQVTYLPISSEVTDVNRYRSGE ------------------------------------------------------------ IDMTYNNMPIELFQKLKKEIPNEVRVDPYLCTYYYEINNQKAPFNDVRVRTALKLALDRD ------------------------------1----------------------------- IIVNKVKNQGDLPAYSYTPPYTDGAKLVEPEWFKWSQQKRNEEAKKLLAEAGFTADKPLT ------------------------------------------------------------ FDLLYNTSDLHKKLAIAVASIWKKNLGVNVNLENQEWKTFLDTRHQGTFDVARAGWCADY --------------------------------------------------------1--- NEPTSFLNTMLSDSSNNTAHYKSPAFDKLIADTLKVADDTQRSELYAKAEQQLDKDSAIV ------------------------------------------------------------ PVYYYVNARLVKPWVGGYTGKDPLDNIYVKNLYIIKH ------------------------------------- >RETINOIC ACID EARLY TRANS; SWP:O08603; PDB:1JFMA; DAHSLRCNLTIKDPTPADPLWYEAKCFVGEILILHLSNINKTMTSGDPGETANATEVKKC ------1------------------1---------------------------------2 LTQPLKNLCQKLRNKVSNTKVDTHKTNGYPHLQVTMIYPQSQGRTPSATWEFNISDSYFF ------------------------------------------------------------ TFYTENMSWRSANDESGVIMNKWKDDGEFVKQLKFLIHECSQKMDEFLKQSKEK ---------------------------------------2-------------- >Ig heavy chain V region 3; SWP:P01747; PDB:1JFQH; VQLQQSGVELVRAGSSVKMSCKASGYTFTSNGINWVKQRPGQGLEWIGYNNPGNGYITYN --------------------1--------------------------------------- EKFKGKTTLTVDKSSNTAYMQLRSLTSEDSAVYFCARSEYYGGSYKFDYWGQGTTLTVSS ----------------------------------1------------------------- AGTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSD --------------------------2--------------------------------- LYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPR ---------------------2------------------ >LIPASE; SWP:Q56008; PDB:1JFRA; NPYERGPAPTNASIEASRGPYATSQTSVSSLVASGFGGGTIYYPTSTADGTFGAVVISPG ------------------------------------------------------------ FTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPDSRGRQLLSALDYLTQRSSVRTRVDA ------------------------------------------------------------ TRLGVMGHSMGGGGSLEAAKSRTSLKAAIPLTGWNTDKTWPELRTPTLVVGADGDTVAPV ------------------------------------------------------------ ATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFIDSDTRYEQFLC -----------------------------------------------------------1 PIPRPSLTIAEYRGTCPHTS ---------------1---- >THIOL:DISULFIDE INTERCHAN; SWP:P43221; PDB:1JFUA; TGDPACRAAVATAQKIAPLAHGEVAALTMASAPLKLPDLAFEDADGKPKKLSDFRGKTLL -----1------------------------------------------------------ VNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYF -------2--2------------------------------------------------- NDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATG ------------------------------1------------------------- >1,4-BETA-N-ACETYLMURAMIDA; SWP:P25310; PDB:1JFXA; DTSGVQGIDVSHWQGSINWSSVKSAGMSFAYIKATEGTNYKDDRFSANYTNAYNAGIIRG ------------------------------------------------------------ AYHFARPNASSGTAQADYFASNGGGWSRDNRTLPGVLDIEHNPSGAMCYGLSTTQMRTWI -----------------------------------------------1------------ NDFHARYKARTTRDVVIYTTASWWNTCTGSWNGMAAKSPFWVAHWGVSAPTVPSGFPTWT --------------------------1--------------------------------- FWQYSATGRVGGVSGDVDRNKFNGSAARLLALANNTA ------------------------------------- >CANDOXIN; SWP:P81783; PDB:1JGKA; MKCKICNFDTCRAGELKVCASGEKYCFKESWREARGTRIERGCAATCPKGSVYGLYVLCC --1--2----2-------3------1----------------3---4-----------45 TTDDCN ----5- >CYCLIC PHOSPHODIESTERASE; SWP:O04147; PDB:1JH6A; MEEVKKDVYSVWALPDEESEPRFKKLMEALRSEFTGPRFVPHVTVAVSAYLTADEAKKMF ------------------------------------------------------------ ESACDGLKAYTATVDRVSTGTFFFQCVFLLLQTTPEVMEAGEHCKNHFNCSTTTPYMPHL ---1-------------------------------------------------------- SLLYAELTEEEKKNAQEKAYTLDSSLDGLSFRLNRLALCKTDTEDKTLETWETVAVCNLN --------------------------------------------------------1--- P - >Ig heavy chain V region 3; SWP:P01749; PDB:1JHLH; QVQLQQSGAELVRPGASVKLSCKASGYTFISYWINWVKQRPGQGLEWIGNIYPSDSYTNY ---------------------1-------------------------------------- NQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYCTRDDNYGAMDYWGQGTTVTV -----------------------------------1-------------------- >Ig heavy chain V region 3; SWP:P01749; PDB:1JHLL; DIELTQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPS ----------------------1------------------------------------- RFSGSGSGTDFTLTISSLEPEDFAMYICQQHNEYPWTFGGGTKLEIKR ---------------------------1-------------------- >CALNEXIN; SWP:P24643; PDB:1JHNA; YKAPVPSGEVYFADSFDRGTLSGWILSKAKDGKWEVDEMKETKLPGDKGLVLMSRAKHHA ------------------------------------------------------------ ISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFG -----------------------------1------------------------------ PDKCGEDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEI ---1-------------------------------------------------------- LVDQSIVNSGNPVNPSREIEDPEDQKPEDWDERPKIPDPDAVKPDDWNEDAPAKIPDEEA ------------------------------------------------------------ TKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNP ------------------------------------------2-----2----------- NYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELWSMTSDIFFDN ------------------------------------------------------------ FIVCGDRRVVDDWANDGWGL -------------------- >DISSIMILATORY SIROHEME-SU; SWP:Q8ZUX1; PDB:1JI8A; MPVKCPGEYQVDGKKVILDEDCFMQNPEDWDEKVAEWLARELEGIQKMTEEHWKLVKYLR ----1----------------1-------------------------------------- EYWETFGTCPPIKMVTKETGFSLEKIYQLFPSGPAHGACKVAGAPKPTGCV --------2-----------------------------2------------ >PHOSPHOLIPASE A2; SWP:O42187; PDB:1JIAA; HLLQFRKMIKKMTGKEPVVSYAFYGCYCGSGGRGKPKDATDRCCFVHDCCYEKVTGCDPK -------------------------1-2--------------32----45------6--- WDDYTYSWKNGTIVCGGDDPCKKEVCECDKAAAICFRDNLKTYKKRYMAYPDILCSSKSE --------------7-----6----7-5------3-------------------1----- KC -4 >Proteinase inhibitor [Pre; SWP:Q03026; PDB:1JIWI; SSLILLSASDLAGQWTLQQDEAPAICHLELRDSEVAEASGYDLGGDTACLTRWLPSEPRA -------------------------1----------------------1----------- WRPTPAGIALLERGGLTLMLLGRQGEGDYRVQKGDGGQLVLRRAT --------------------------------------------- >NEUROPHYSIN 2; SWP:P01180; PDB:1JK4A; LRQCLPCGPGGKGRCFGPSICCGDELGCFVGTAEALRCQEENYLPSPCQSGQKPCGSGGR ---1--2-------3-----24-----4---------3---------1------5----- CAAAGICCNDESCVTEPEC 6-----57----7-----6 >HLA class II histocompati; SWP:P01920; PDB:1JK8B; SPEDFVYQFKGMCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAVTPLGPPAAEYWN ------------1----------------------------------------------- SQKEVLERTRAELDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDF ----------------1-------------------------------------2----- YPAQIKVRWFRNDQEETTGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQN --------------------------------------------------2--------- PIIVEWRAQS ---------- >DEFENSE-RELATED PEPTIDE 1; SWP:P81929; PDB:1JKZA; KTCEHLADTYRGVCFTNASCDDHCKNKAHLISGTCHNWKCFCTQNC --1----------2-----3---4----------2----3-4---1 >INTERLEUKIN 3; SWP:P08700; PDB:1JLI; ANCSIMIDEIIHHLKRPPNPLLDPNNLNSEDMDILMERNLRTPNLLAFVRAVKHLENASA --1--------------------------------------------------------- IESILKNLLPCLPLATAAPTRHPIHIKDGDWNEFRRKLTFYLKTLENAQAQQ ----------1----------------------------------------- >PHOSPHOLIPASE A2 INHIBITO; SWP:P04084; PDB:1JLTA; NLFQFGDMILQKTGKEAVHSYAIYGCYCGWGGQARAQDATDRCCFAQDCCYGRVNDCNPK -------------------------1-2--------------32----45------6--- TATYTYSFENGDIVCGDNDLCLRAVCECDRAAAICLGENVNTYDKNYEYYSISHCTEESE --------------7-----6----7-5------3-------------------1----- QC -4 >Phospholipase A2; SWP:P14420; PDB:1JLTB; NLFQFAKMINGKLGAFSVWNYISYGCYCGWGGQGTPKDATDRCCFVHDCCYGRVRGCNPK -------------------------1-2--------------32----45------6--- LAIYSYSFKKGNIVCGKNNGCLRDICECDRVAANCFHQNKNTYNKNYKFLSSSRCRQTSE --------------7-----6----7-5------3-------------------1----- QC -4 >RIESKE IRON-SULFUR PROTEI; SWP:Q53766; PDB:1JM1A; NTDGLAGFPRYKVANIQQVQQQIKSSGCAVYFFAYPLTDEPCFLVDLQALTGQQITEIPN ---------------------------1-------------------------------- PYYGKYAGPLGQIQTIKGVGPNGTIFAFSDVCVHLGCQLPAQVIVSSESDPGLYAKGADL ------------------------------------2----------------------- HCPCHGSIYALKDGGVVVSGPAPRPLPIVILDYDSSTGDIYAVGTNAPYFSAGIPRTTPQ ---2-------------------------------------------------------- DNLLYDPRYSYSVPNNPSCSNG ------------------1--- >Tumor necrosis factor rec; SWP:Q92956; PDB:1JMAB; CKEDEYPVGSECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDP 1----------12--3---------2-------3--4--------------4--5--6-- AMGLRASRNCSRTENAVCGCSPGHFCIVQDHCAACRAYAT ---------5-------6-7-----8-----8--7----- >REPLICATION PROTEIN A; SWP:P27694; PDB:1JMCA; KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNEQV -----------------1------------------------------------------ DKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDHHLPTVQFDF ----------------------------------------------1------------- TGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWG ------------------------------------------------------------ EDADKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQ ---------------------------------------------------------- >VISCOTOXIN A2; SWP:P32880; PDB:1JMNA; KSCCPNTTGRNIYNTCRFGGGSRQVCASLSGCKIISASTCPSDYPK --12-----------3---------3-----2-------1------ >VISCOTOXIN B; SWP:P08943; PDB:1JMPA; KSCCPNTTGRNIYNTCRLGGGSRERCASLSGCKIISASTCPSDYPK --12-----------3---------3-----2-------1------ >Quinohemoprotein amine de; SWP:Q8VW82; PDB:1JMXB; GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH ---------------------------------1-------------------------- YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK -----------1------------------------------------------------ PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALP ------------------------------------------------------------ LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFATADLLYGYLSVDLKTGKTHTQEF ------------------------------------------------------------ ADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLY ------------------------------------------------------------ LGGTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTPQVFIR --------------------------------------- >monoclonal anti-estradiol; SWP:NA; PDB:1JN6B; EVQLQQSGAELARPGASVKLSCRTSGYSFTTYWMQWVRQRPGQGLEWIAAIYPGDDDARY ---------------------1-------------------------------------- TQKFKGKATLTADRSSSIVYLQLNSLTSEDSAVYSCSRGRSLYYTMDYWGQGTSVTVTTP -----------------------------------1------------------------ PSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVSWNTGSLSSGVHTFPAVLQSDLYTLS ---------------------2-------------------------------------- SSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP ----------------2----------------- >IMAGINAL DISC GROWTH FACT; SWP:Q9V3D4; PDB:1JNDA; SNLVCYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGLRGENLQAYSMNENLDIYK ----1--------------------------1---------------------------- HQFSEVTSLKRKYPHLKVLLSVGGDHDIDPDHPNKYIDLLEGEKVRQIGFIRSAYELVKT ------------------------------------------------------------ YGFDGLDLAYQFPKNKPRKVIVDPHAALHKEQFTALVRDVKDSLRADGFLLSLTVLPNVN ------------------------------------------------------------ STWYFDIPALNGLVDFVNLATFDFLTPARNPEEADYSAPIYHPDGSKDRLAHLNADFQVE ------------------------------------------------------------ YWLSQGFPSNKINLGVATYGNAWKLTKDSGLEGVPVVPETSGPAPEGFQSQKPGLLSYAE ------------------------------------------------------------ ICGKLSNPQNQFLKGNESPLRRVSDPTKRFGGIAYRPVDGQITEGIWVSYDDPDSASNKA -2---------------------------------------------------------- AYARVKNLGGVALFDLSYDDFRGQCSGDKYPILRAIKYRL ------------------------2--------------- >monoclonal anti-estradiol; SWP:NA; PDB:1JNLH; EVQLQQSGAELVKPGASVRLSCSASGFNIKDTYMFWVKQRPEQGLDWIGRINPANGISKY ---------------------1-------------------------------------- DPRFQGKATLTADTSSNTAYLQLDNLTSEDTAVYYCAIEKDLPWGQGTLVTVSVAKTTPP -----------------------------------1------------------------ SVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSS --------------------2--------------------------------------- SVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC ---------------2-------------------- >AZURIN; SWP:P80546; PDB:1JOI; AECKVTVDSTDQMSFNTKAIEIDKSCKTFTVELTHSGSLPKNVMGHNWVLSSAADMPGIA --1----------------------1---------------------------------- SDGMAAGIDKNYLKEGDTRVIAHTKIIGAGEKDSVTFDVSKLAAGTDYAFFCSFPGHISM ------------------------------------------------------------ MKGTVTVK -------- >HI1317; SWP:Q9RP27; PDB:1JOVA; MKTTLLKTLTPELHLVQHNDIPVLHLKHAVGTAKISLQGAQLISWKPQNAKQDVLWLSEV ------------------------------------------------------------ EPFKNGNAIRGGVPICYPWFGGVKQPAHGTARIRLWQLSHYYISVHKVRLEFELFSDLNI ------------------------------------------------------------ IEAKVSMVFTDKCHLTFTHYGEESAQAALHTYFNIGDINQVEVQGLPETCFNSLNQQQEN -------------------------------------------------1---------- VPSPRHISENVDCIYSAENMQNQILDKSFNRTIALHHHNASQFVLWNPWHKKTSGMSETG ------------1----------------------------------------------- YQKMLCLETARIHHLLEFGESLSVEISLK ----------------------------- >AGGLUTININ; SWP:P30617; PDB:1JPC; DNILYSGETLSTGEFLNYGSFVFIMQEDCNLVLYDVDKPIWATNTGGLSRSCFLSMQTDG ----------------------------1----------------------1-------- NLVVYNPSNKPIWASNTGGQNGNYVCILQKDRNVVIYGTDRWATGTHT ------------------------------------------------ >Tissue factor [Precursor]; SWP:P13726; PDB:1JPSH; EVQLVESGGGLVQPGGSLRLSCAASGFNIKEYYMHWVRQAPGKGLEWVGLIDPEQGNTIY ---------------------1-------------------------------------- DPKFQDRATISADNSKNTAYLQMNSLRAEDTAVYYCARDTAAYFDYWGQGTLVTVSSAST -----------------------------------1------------------------ KGPSVFPLAPSSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSS -------------------2---------------------------------------- VVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP ---------------2----------------- >Prolactin-binding protein; SWP:Q9QV16; PDB:1JPTH; EVQLVESGGGLVQPGGSLRLSCAASGFNIKEYYMHWVRQAPGKGLEWVGLIDPEQGNTIY ---------------------1-------------------------------------- DPKFQDRATISADNSKNTAYLQMNSLRAEDTAVYYCARDTAAYFDYWGQGTLVTVSSAST -----------------------------------1------------------------ KGPSVFPLAPSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSV ------------------2----------------------------------------- VTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP --------------2----------------- >IGKC protein; SWP:Q6GMW1; PDB:1JPTL; DIQMTQSPSSLSASVGDRVTITCRASRDIKSYLNWYQQKPGKAPKVLIYYATSLAEGVPS ----------------------1------------------------------------- RFSGSGSGTDYTLTISSLQPEDFATYYCLQHGESPWTFGQGTKVEIKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE -------------2------------------- >DIPEPTIDYL PEPTIDASE I; SWP:P80067; PDB:1JQPA; DTPANCTYPDLLGTWVFQVGPRHPRSHINCSVMEPTEEKVVIHLKKLDTAYDEVGNSGYF -----1-----------------------2------------------------------ TLIYNQGFEIVLNDYKWFAFFKYEVKGSRAISYCHETMTGWVHDVLGRNWACFVGKKMLS ---------------------------------1-----------------2-------- LPESWDWRNVRGINFVSPVRNQESCGSCYSFASLGMLEARIRILTNNSQTPILSPQEVVS ------------------------3----------------------------------- CSPYAQGCDGGFPYLIAGKYAQDFGVVEENCFPYTATDAPCKPKENCLRYYSSEYYYVGG 4------3----------------------5---------4-----5------------- FYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHHPFNPFELTNHAVLLVGYGKD ------------------------------------------------------------ PVTGLDYWIVKNSWGSQWGESGYFRIRRGTDECAIESIAMAAIPIPKL ------------------------------------------------ >ERV2 PROTEIN, MITOCHONDRI; SWP:Q12284; PDB:1JR8A; DDKVKKEVGRASWKYFHTLLARFPDEPTPEEREKLHTFIGLYAELYPCGECSYHFVKLIE -----------------------------------------------1--1--------- KYPVQTSSRTAAAMWGCHIHNKVNEYLKKDIYDCATILEDYDCGC ----------------2----------------2--------3-3 >ScFv 6H8 protein [Fragmen; SWP:Q7TQM2; PDB:1JRHL; SVEMTQSPSSFSVSLGDRVTITCKASEDIYNRLAWYQQKPGNAPRLLISGATSLETEVPS ----------------------1------------------------------------- RFSGSGSGKDYTLSITSLQTEDVATYYCQQYWSTWTFGGGTKLEIKRADAAPTVSIFPCF ---------------------------1------------------------------2- LNNFYPKDINVKGVLNSWTDQDSKDSTYSMSSTCEATHKTSTSPIVK ---------------------------------2------------- >HEMOCYANIN; SWP:O61363; PDB:1JS8A; AIIRKNVNSLTPSDIKELRDAMAKVQADTSDNGYQKIASYHGIPLSCHYENGTAYACCQH ----------------------------------------------1---------1--- GMVTFPNWHRLLTKQMEDALVAKGSHVGIPYWDWTTTFANLPVLVTEEKDNSFHHAHIDV ------------------------------------------------------------ ANTDTTRSPRAQLFSFFYRQIALALEQTDFCDFEIQFEIGHNAIHSWVGGSSPYGMSTLH ------------------------------2----------------------------- YTSYDPLFYLHHSNTDRIWSVWQALQKYRGLPYNTANCEINKLVKPLKPFNLDTNPNAVT -------------------------------------2---------------------- KAHSTGATSFDYHKLGYDYDNLNFHGMTIPELEEHLKEIQHEDRVFAGFLLRTIGQSADV ------------------------------------------------------------ NFDVCTKDGECTFGGTFCILGGEHEMFWAFDRLFKYDITTSLKHLRLDAHDDFDIKVTIK ----3-----3------------------------------------------------- GIDGHVLSNKYLSPPTVFLAPA ---------------------- >HAEMAGGLUTININ (HA1 CHAIN; SWP:Q91CD4; PDB:1JSDA; DKICIGYQSTNSTETVDTLTETNVPVTHAKELLHTSHNGMLCATNLGHPLILDTCTIEGL -----------------------------------------1------------2----- IYGNPSCDLLLGGREWSYIVERPSAVNGMCYPGNVENLEELRSLFSSASSYQRIQIFPDT ------2----------------------3------------------------------ IWNVSYSGTSSACSDSFYRSMRWLTQKNNAYPIQDAQYTNNRGKSILFMWGINHPPTDTV ------------3----------------------------------------------- QTNLYTRTDTTTSVTTEDINRTFKPVIGPRPLVNGLHGRIDYYWSVLKPGQTLRVRSNGN ------------------------------------------------------------ LIAPWYGHILSGESHGRILKTDLNSGNCVVQCQTERGGLNTTLPFHNVSKYAFGNCPKYV ---------------------------1---4-----------------------4---- GVKSLKLAVGLRNVPAR ----------------- >Hemagglutinin; SWP:Q3SC70; PDB:1JSDB; GLFGAIAGFIEGGWPGLVAGWYGFQHSNDQGVGMAADSDSTQKAIDKITSKVNNIVDKMN ------------------------------------------------------------ KQYGIIDHEFSEIETRLNMINNKIDDQIQDIWTYNAELLVLLENQKTLDEHDANVNNLYN ------------------------------------------------------------ KVKRALGSNAMEDGKGCFELYHKCDDQCMETIRNGTYNRR -----------------------1---1------------ >LYSOZYME; SWP:P00703; PDB:1JSE; KVYGRCELAAAMKRLGLDNYRGYSLGNWVCAAKFESNFNTHATNRNTDGSTDYGILQINS -----1-----------------------2------------------------------ RWWCNDGRTPGSKNLCNIPCSALLSSDITASVNCAKKIASGGNGMNAWVAWRNRCKGTDV ---3-----------4---3-------------4--------------------2----- HAWIRGCRL ------1-- >HAEMAGGLUTININ (HA1 CHAIN; SWP:Q9DLP3; PDB:1JSMA; DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLNGVKPLILRDCSVAGW -----------------------------------------1------------2----- LLGNPMCDEFLNVPEWSYIVEKDNPVNGLCYPENFNDYEELKHLLSSTNHFEKIRIIPRS ------2----------------------3------------------------------ SWSNHDASSGVSSACPYNGRSSFFRNVVWLIKKNNAYPTIKRSYNNTNQEDLLILWGIHH --------------3--------------------------------------------- PNDAAEQTKLYQNPTTYVSVGTSTLNQRSVPEIATRPKVNGQSGRMEFFWTILKPNDAIN ------------------------------------------------------------ FESNGNFIAPEYAYKIVKKGGSAIMKSGLEYGNCNTKCQTPMGAINSSMPFHNIHPLTIG ---------------------------------1---4---------------------- ECPKYVKSGRLVLATGLRNVP -4------------------- >Hemagglutinin [Fragment]; SWP:Q4ZJH5; PDB:1JSMB; GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGTTNKVNSIIDKMN ------------------------------------------------------------ TQFEAVGKEFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYD ------------------------------------------------------------ KVRLQLRDNAKELGNGCFEFYHKCDNECMESVKNGTYDYP -----------------------1---1------------ >HYDROXYNITRILE LYASE; SWP:Q945K2; PDB:1JU2A; LATTSDHDFSYLSFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLP ------------------------------------------------------------ TAYPNVLTADGFVYNLQQEDDGKTPVERFVSEDGIDNVRGRVLGGTSIINAGVYARANTS ------------------------------------------------------------ IYSASGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLEAGVHPNHGFSLDHEEG ------------------------------------------------------------ TRITGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNG ------------------------------------------------------------ TPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPR ------------------------------------------------------------ NFINILPPNPIEPTIVTVLGISNDFYQCSFSSLPFTTPPFGFFPSSSYPLPNSTFAHFAS ------------------------------------------------------------ KVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKV --------------------------------------1--------------------- EDLPGVEGFNILGIPLPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGIN -----------------------------1------------------------------ ALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQERSASD ----------------------------------------- >LEGINSULIN; SWP:Q39837; PDB:1JU8A; ADCNGACSPFEVPPCRSRDCRCVPIGLFVGFCIHPTG --1---2-------3----1-2---------3----- >LYSOZYME; SWP:P37156; PDB:1JUG; KILKKQELCKNLVAQGMNGYQHITLPNWVCTAFHESSYNTRATNHNTDGSTDYGILQINS --------1--------------------2------------------------------ RYWCHDGKTPGSKNACNISCSKLLDDDITDDLKCAKKIAGEAKGLTPWVAWKSKCRGHDL ---3-----------4---3-------------4--------------------2----- SKFKC ----1 >INTEGRIN, ALPHA V; SWP:P06756; PDB:1JV2A; FNLDVDSPAEYSGPEGSYFGFAVDFFVPSASSRMFLLVGAPKANTTQPGIVEGGQVLKCD ----------------------------------------------------------1- WSSTRRCQPIEFDATGNRDYAKDDPLEFKSHQWFGASVRSKQDKILACAPLYHWRTEMKQ ------1----------------------------------------2------------ EREPVGTCFLQDGTKTVEYAPCRSQDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQ -------2-------------3------------3------------------------- GQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFV ------------------------------------------------------------ SGVPRAARTLGMVYIYDGKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLF ------------------------------------------------------------ MDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVFARFGSAIAPLGDLDQDGFNDIAI ------------------------------------------------------------ AAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEGQWAARSMPPSFGYSMKGATDIDKNGYP ------------------------------------------------------------ DLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLK ----------------------------------------4----------4-----5-- ADGKGVLPRKLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIA ------------------------------------------------------5----- YLRDESEFRDKLTPITIFMEYRLDYRTAADTTGLQPILNQFTPANISRQAHILLDCGEDN -------------------------------------------------------6---- VCKPKLEVSVDSDQKKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGVVRNN -6---------------------------------------------------------- EALARLSCAFKTENQTRQVVCDLGNPMKAGTQLLAGLRFSVHQQSEMDTSVKFDLQIQSS -------7------------7--------------------------------------- NLFDKVSPVVSHKVDLAVLAAVEIRGVSSPDHVFLPIPNWEHKENPETEEDVGPVVQHIY ------------------------------------------------------------ ELRNNGPSSFSKAMLHLQWPYKYNNNTLLYILHYDIDGPMNCTSDMEINPLRIKISSLDI -----------------------------------------8------------------ HTLGCGVAQCLKIVCQVGRLDRGKSAILYVKSLLWTETFMNKENQNHSYSLKSSASFNVI ----9----9----8--------------------------------------------- EFPYKNLPIEDITNSTLVTTNVTWGIQ --------------------------- >Integrin beta-3 [Precurso; SWP:P05106; PDB:1JV2B; EFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDI ------------------------------------------------------------ YYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALE ------------------------------------------------------------ NPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCDE --1------1-----------------------------------------------2-- KIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGL --------------------------------------2--------------------- MTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIRSK ------------------------------------------------------------ VELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSF -------------------3-----------3-------------------4-------- TIKPVGFKDSLIVQVTFDCDKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSN ------------------4-----5-----6-5--6-7--------7-8------9---- GLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDREPYMTENTC ---a-----9-8--a-b---------b--c--c---d-----e--f-------------f NRYCRDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKG ---e-------------------d-------g-----------------------g--- >IG KAPPA CHAIN PRECURSOR ; SWP:NA; PDB:1JV5B; QVQLQQPGAELVKPGTSVKLSCKASGYNFTSYWINWVKLRPGQGLEWIGDIYPGSGITNY ---------------------1-------------------------------------- NEKFKSKATLTVDTSSSTAYMQLSSLASEDSALYYCAGQYGNLWFAYWGQGTLVTVS -----------------------------------1--------------------- >IMMUNOGLOBULIN LAMBDA LIG; SWP:NA; PDB:1JVKA; TALTQPASVSGSPGQSITVSCTGVSSIVGSYNLVSWYQQHPGKAPKLLTYEVNKRPSGVS --------------------1--------------------------------------- DRFSGSKSGNSASLTISGLQAEDEADYYCSSYDGSSTSVVFGGGTKLTVLGQPKAAPSVT ----------------------------1------------------------------- LFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTKPSKQSNNKYAASS -----------------2------------------------------------------ YLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTAC ----------------2------------------ >BITISCETIN; SWP:Q7LZK5; PDB:1JWIA; CLPDWSSYKGHCYKVFKKVGTWEDAEKFCVENSGHLASIDSKEEADFVTKLASQTLFVYD 1----------1----------------2------------------------------- AWIGLRDESKTQQCSPQWTDGSSVVYENVDEPTKCFGLDVHTEYRTWTDLPCGEKNPFIC ----------------------------------3----------------3-------2 KS -- >Bitiscetin beta chain; SWP:Q7LZK8; PDB:1JWIB; GCLPDWSSYKGHCYKVFKVEKTWADAEKFCKELVNGGHLMSVNSREEGEFISKLALEKMR -1----------1----------------2------------------------------ IVLVWIGLSHFWRICPLRWTDGARLDYRALSDEPICFVAESFHNKWIQWTCNRKKSFVCK -----------------------------------3--------------3-------2- YRV --- >PUTATIVE TRYPSIN INHIBITO; SWP:Q42328; PDB:1JXCA; CPEIEAQGNECLKEYGGDVGFGFCAPRIFPTICYTRCRENKGAKGGRCRWGQGSNVKCLC ----------1------------2--------3---4----------2---------3-4 DFCGDTPQ --1----- >PLASTOCYANIN A; SWP:P00299; PDB:1JXGA; MIDVLLGADDGSLAFVPSEFSCSPGCKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSE ---------------------1---1---------------------------------- EDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN ---------------------------------------- >CALSEPRRP; SWP:Q9M7C7; PDB:1JY5A; HKEFDYFTLALTWSGTECLSCPTNACSRSEVETGFTIKGLWPDYDDGTWPSCCEGAKYDQ -----------------1--2----1-------------------------34------- NEISILSNDLSKYWPSYSCPSSSACGSFDASDLAYEWAKHGTCSSPVLGNQYEYFSTTLM ------------------2-----3-----------------4----------------- LYFKYNISEILSESGYLPSNTAEYKVEGIMSAIQSALRVTPVVKCKSDAVEQVQICFDKT --------------------------------------------5----------6---- LQLQECPSTASTCPSLVSLPIKN -----6------5---------- >PLASMA RETINOL-BINDING PR; SWP:P02753; PDB:1JYDA; ERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGR ---1-------------------------------------------------------- VRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSC ---------2-------------------------------------------------3 RLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYC --------3------------------------------1-------------2 >NEUROTOXIN 2; SWP:P01493; PDB:1JZAA; KEGYLVNKSTGCKYGCLKLGENEGCDKECKAKNQGGSYGYCYAFACWCEGLPESTPTYPL -----------1---2--------3---4-----------2----3-4------------ PNKSCS ----1- >GALACTOSE-SPECIFIC LECTIN; SWP:P21963; PDB:1JZNA; NNCPLDWLPMNGLCYKIFNQLKTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISDYH --1----------1----------------2------3---------------------- KGQENVWIGLRDKKKDFSWEWTDRSCTDYLTWDKNQPDHYQNKEFCVELVSLTGYRLWND ---------------------------------------------4-------------- QVCESKDAFLCQCKF --4-------2-3-- >LIPOCALIN Q83; SWP:Q9I9P7; PDB:1JZUA; MTVPDRSEIAGKWYVVALASNTEFFLREKDKMKMAMARISFLGEDELKVSYAVPKPNGCR ----------------------------------------------------------1- KWETTFKKTSDDGEVYYSEEAKKKVEVLDTDYKSYAVIYATRVKDGRTLHMMRLYSRSPE ------------------------------------------------------------ VSPAATAIFRKLAGERNYTDEMVAMLPRQEECTVDEV -------------------------------1----- >FEZ-1 BETA-LACTAMASE; SWP:Q9K578; PDB:1K07A; YPMPNPFPPFRIAGNLYYVGTDDLASYLIVTPRGNILINSDLEANVPMIKASIKKLGFKF ------------------------------------------------------------ SDTKILLISHAHFDHAAGSELIKQQTKAKYMVMDEDVSVILSGGKSDFHYANDSSTYFTQ ------------------------------------------------------------ STVDKVLHDGERVELGGTVLTAHLTPGHTRGCTTWTMKLKDHGKQYQAVIIGSIGVNPGY ------------------------------------------------------------ KLVDNITYPKIAEDYKHSIKVLESMRCDIFLGSHAGMFDLKNKYVLLSKGQNNPFVDPTG --------------------------1--------------------------------- CKNYIEQKANDFYTELKKQETG 1--------------------- >LECTIN; SWP:Q7SIC1; PDB:1K12A; VIPEGYTQENVAVRGKATQSAQLRGEHAANSEASNAIDGNRDSNFYHGSCTHSSGQANPW -------------------------------------------------1---------- WRVDLLQVYTITSVTITNRGDCCGERISGAEINIGQHLASNGVNNPECSVIGSMATGETK ---------------------22------------------------3------------ TFHCPAPMIGRYVVTYLPTSESLHLCEVEVNVDKPAAA ---3---------------------1------------ >EPIREGULIN; SWP:O14944; PDB:1K36A; VSITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCEHFFL -----1-------2----1----------2-3--------3----- >GALACTOSE OXIDASE PRECURS; SWP:Q01745; PDB:1K3IA; ASAPIGSAISRNNWAVTCDSAQSGNECNKAIDGNKDTFWHTFYGANGDPKPPHTYTIDMK ------------------------------------------------------------ TTQNVNGLSMLPRQDGNQNGWIGRHEVYLSSDGTNWGSPVASGSWFADSTTKYSNFETRP ------------------------------------------------------------ ARYVRLVAITEANGQPWTSIAEINVFQASSYTAPQPGLGRWGPTIDLPIVPAAAAIEPTS ------------------------------------------------------------ GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFPGISMDGNGQIVV ------------------------------------------------------------ TGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEV ------------------------------------------------------------ YSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSG ------------------------------------------------------------ SGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGE ------------------------------------------------------------ PGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD ------------------------------------------------------------ TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPNYLYNSNGNLA ---------------------------------1--1----------------------- TRPKITRTSTQSVKVGGRITISTDSSISKASLIRYGTATHTVNTDQRRIPLTLTNNGGNS ------------------------------------------------------------ YSFQVPSDSGVALPGYWMLFVMNSAGVPSVASTIRVTQ -------------------------------------- >ANTIBODY FAB FRAGMENT HEA; SWP:P0A334; PDB:1K4CA; QVQLQQPGAELVKPGASVKLSCKASGYTFTSDWIHWVKQRPGHGLEWIGEIIPSYGRANY ---------------------1-------------------------------------- NEKIQKKATLTADKSSSTAFMQLSSLTSEDSAVYYCARERGDGYFAVWGAGTTVTVSSAK -----------------------------------1------------------------ TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLY ------------------------------------------------------------ TLSSSVTVPSSSWPSETVTCNVAHPASSTKVDKKIVPRD --------------------------------------- >Voltage-gated potassium c; SWP:P0A334; PDB:1K4CB; DILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS ----------------------1------------------------------------- RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRN -------------2------------------ >MAJOR ENVELOPE PROTEIN E; SWP:P07720; PDB:1K4RA; SRCTHLENRDFVTGTQGTTRVTLVLELGGCVTITAEGKPSMDVWLDAIYQENPAKTREYC --1--------------------------1-----------------------------2 LHAKLSDTKVAARCPTMGPATLAEEHQGGTVCKRDQSDRGWGNHCGLFGKGSIVACVKAA -------------3-----------------4------------3----------4---- CEAKKKATGHVYDANKIVYTVKVEPHTGDYVAANETHSGRKTASFTISSEKTILTMGEYG 2----------------------------------------------------------- DVSLLCRVASGVDLAQTVILELDKTVEHLPTAWQVHRDWFNDLALPWKHEGAQNWNNAER -----5------------------------------------------------------ LVEFGAPHAVKMDVYNLGDQTGVLLKALAGVPVAHIEGTKYHLKSGHVTCEVGLEKLKMK -------------------------------------------------5---------- GLTYTMCDKTKFTWKRAPTDSGHDTVVMEVTFSGTKPCRIPVRAVAHGSPDVNVAMLITP ------6------------------------------6---------------------- NPTIENNGGGFIEMQLPPGDNIIYVGELSHQWFQK ----------------------------------- >LIVER CARBOXYLESTERASE; SWP:P12337; PDB:1K4YA; PPVVDTVHGKVLGKFVSLEGFAQPVAVFLGVPFAKPPLGSLRFAPPQPAESWSHVKNTTS ------------------------------------------------------------ YPPMCSQDAVSGHMLSELFTNRKENIPLKFSEDCLYLNIYTPADLTKRGRLPVMVWIHGG ----1----------------------------1-------------------------- GLMVGGASTYDGLALSAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQ ------------------------------------------------------------ DNIANFGGDPGSVTIFGESAGGQSVSILLLSPLTKNLFHRAISESGVALLSSLFRKNTKS ------------------------------------------------------------ LAEKIAIEAGCKTTTSAVMVHCLRQKTEEELMEVTLKMKFMALDLVGDPKENTAFLTTVI ----------2----------2-------------------------------------- DGVLLPKAPAEILAEKKYNMLPYMVGINQQEFKLDQKTATELLWKSYPIVNVSKELTPVA ------------------------------------------------------------ TEKYLGGTDDPVKKKDLFLDMLADLLFGVPSVNVARHHRDAGAPTYMYEYRHGDEIFSVL ------------------------------------------------------------ GAPFLKEGATEEEIKLSKMVMKYWANFARNGNPNGEGLPQWPAYDYKEGYLQIGATTQAA ------------------------------------------------------------ QKLKDKEVAFWTELWAKEAAR --------------------- >BETA LACTAMASE OXA-10; SWP:P14489; PDB:1K55A; SITENTSWNKEFSAEAVNGVFVLCKSSSKSCATNDLARASKEYLPASTFIPNAIIGLETG -----------------------1------1----------------------------- VIKNEHQVFKWDGKPRAMKQWERDLTLRGAIQVSAVPVFQQIAREVGEVRMQKYLKKFSY ------------------------------------------------------------ GNQNISGGIDKFWLEGQLRISAVNQVEFLESLYLNKLSASKENQLIVKEALVTEAAPEYL ------------------------------------------------------------ VHSKTGFSGVGTESNPGVAWWVGWVEKETEVYFFAFNMDIDNESKLPLRKSIPTKIMESE ------------------------------------------------------------ GIIG ---- >ENDOPOLYGALACTURONASE; SWP:P79074; PDB:1K5CA; CTVKSVDDAKDIAGCSAVTLNGFTVPAGNTLVLNPDKGATVTMAGDITFAKTTLDGPLFT 1-------------1--------------------------------------------- IDGTGINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGSGTYKKFEVLNSPAQAI ------------------------------------------------------------ SVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDVSANNVTIQNCIVKNQDDCIAINDGN ----------------------------------------------------2------- NIRFENNQCSGGHGISIGSIATGKHVSNVVIKGNTVTRSMYGVRIKAQRTATSASVSGVT --------2--------------------------------------------------- YDANTISGIAKYGVLISQSYPDDVGNPGTGAPFSDVNFTGGATTIKVNNAATRVTVECGN ---------------------------------------------------------3-- CSGNWNWSQLTVTGGKAGTIKSDKAKITGGQYL 3-------------------------------- >BETA-2-MICROGLOBULIN, LIG; SWP:Q29846; PDB:1K5NA; GSHSMRYFHTSVSRPGRGEPRFITVGYVDDTLFVRFDSDAASPREEPRAPWIEQEGPEYW ------------------------------------------------------------ DRETQICKAKAQTDREDLRTLLRYYNQSEAGSHTLQNMYGCDVGPDGRLLRGYHQHAYDG ----------------------------------------1------------------- KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQ -------------------------------------------1---------------- RADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRT ----------------------2------------------------------------- FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP ------------------2----------------- >BETA-2-MICROGLOBULIN, LIG; SWP:P01884; PDB:1K5NB; MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKD -------------------------1---------------------------------- WSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM --------------------1------------------- >IMMUNOGLOBULIN FAB D3, LI; SWP:NA; PDB:1K6QH; EVQLQQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKQRPEQGLELIGWIDPENGNTIY ---------------------1-------------------------------------- DPKFQDKASITADTSSNTAYLQLSSLTSEDTAVYYCARDTAAYFDYWGQGTTLTVSSAKT -----------------------------------1------------------------ TPPSVYPLAPGSANSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSS --------------------2--------------------------------------- SVTVPSSTWPSETVTCNVAHPASSTKVDKKKIP ---------------2----------------- >IMMUNOGLOBULIN FAB D3, LI; SWP:NA; PDB:1K6QL; DIKMTQSPSSMSASLGESVTITCKASRDIKSYLSWYQQKPWKSPKTLIYYATSLADGVPS ----------------------1------------------------------------- RFSGSGSGQDYSLTISSLESDDTATYYCLQHGESPFTFGSGTKLELKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATPIVKSFN -------------2---------- >RHAMNOGALACTURONAN ACETYL; SWP:Q00017; PDB:1K7CA; TTVYLAGDSTMAKNGGGSGTNGWGEYLASYLSATVVNDAVAGRSARSYTREGRFENIADV ------------------------------------------------------------ VTAGDYVIVEFGHNDGGSLSTDNGRTDCSGTGAEVCYSVYDGVNETILTFPAYLENAAKL ---------------------------1-------1------------------------ FTAKGAKVILSSQTPNNPWETGTFVNSPTRFVEYAELAAEVAGVEYVDHWSYVDSIYETL ------------------------------------------------------------ GNATVNSYFPIDHTHTSPAGAEVVAEAFLKAVVCTGTSLKSVLTTTSFEGTCL ---------------------------------2-----------------2- >ALKALINE PHOSPHATASE; SWP:NA; PDB:1K7HA; EEDKAYWNKDAQDALDKQLGIKLREKQAKNVIFFLGDGMSLSTVTAARIYKGGLTGKFER ------------------------------------------------------------ EKISWEEFDFAALSKTYNTDKQVTDSAASATAYLTGVKTNQGVIGLDANTVRTNCSYQLD ------------------------------------------------------1----- ESLFTYSIAHWFQEAGRSTGVVTSTRVTHATPAGTYAHVADRDWENDSDVVHDREDPEIC -----------------------------------------------------------1 DDIAEQLVFREPGKNFKVIMGGGRRGFFPEEALDIEDGIPGEREDGKHLITDWLDDKASQ ------------------------------------------------------------ GATASYVWNRDDLLAVDIANTDYLMGLFSYTHLDTVLTRDAEMDPTLPEMTKVAIEMLTK ------------------------------------------------------------ DENGFFLLVEGGRIDHMHHANQIRQSLAETLDMEEAVSMALSMTDPEETIILVTADHGHT ------------------------------------------------------------ LTITGYADRNTDILDFAGISDLDDRRYTILDYGSGPGYHITEDGKRYEPTEEDLKDINFR ------------------------------------------------------------ YASAAPKHSATHDGTDVGIWVNGPFAHLFTGVYEENYIPHALAYAACVGTGRTFCD ----------------------------------------------2-------2- >MHC CLASS II H2-M ALPHA C; SWP:P28078; PDB:1K8IA; QNHTFRHTLFCQDGIPNIGLSETYDEDELFSFDFSQNTRVPRLPDFAEWAQGQGDASAIA ----------1------------------------------------------------- FDKSFCEMLMREVSPKLEGQIPVSRGLPVAEVFTLKPLEFGKPNTLVCFISNLFPPTLTV -----1-----------------------------------------2------------ NWQLHSAPVEGASPTSISAVDGLTFQAFSYLNFTPEPFDLYSCTVTHEIDRYTAIAYWVP ------------------------------------------2----------------- Q - >H2-M beta 2; SWP:Q31099; PDB:1K8IB; GFVAHVESTCVLNDAGTPQDFTYCVSFNKDLLACWDPDVGKIVPCEFGVLSRLAEIISNI ---------1-------------2---------2-------------------------- LNEQESLIHRLQNGLQDCATHTQPFWDVLTHRTRAPSVRVAQTTPFNTREPVMLACYVWG -----------------1-------------------------------------3---- FYPADVTITWMKNGQLVPSHSNKEKTAQPNGDWTYQTVSYLALTPSYGDVYTCVVQHSGT ----------------------------------------------------3------- SEPIRGDWTP ---------- >TRIACYLGLYCEROL LIPASE, G; SWP:P80035; PDB:1K8QA; AFGKLHPTNPEVTMNISQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPV ------------------------------------------------------------ AFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWA ------------------------------------------------------------ FSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALA ------------------------------------------------------------ PVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNAL ----------------------------------------------1--------1---- FIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYH ------------------------------------------------------------ QSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAM ------------------------------------------------------------ DAPQAVYNEIVSMMGTD ----------------- >QUINOHEMOPROTEIN ALCOHOL ; SWP:Q46444; PDB:1KB0A; TGPAAQAAAAVQRVDGDFIRANAARTPDWPTIGVDYAETRYSRLDQINAANVKDLGLAWS ------------------------------------------------------------ YNLESTRGVEATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVV -------------------------------------------------------11--- NRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIG ------------------------------------------------------------ NGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGG ------------------------------------------------------------ GGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQ ------------------------------------------------------------ ETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNW ------------------------------------------------------------ ASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMD ------------------------------------------------------------ DKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWN ------------------------------------------------------------ GGTLTTAGNVVFQGTADGRLVAYHAATGEKLEAPTGTGVVAAPSTYMVDGRQYVSVAVGW ------------------------------------------------------------ GGVYGLAARATERQGPGTVYTFVVGGKARMPETGQLLQGVKYDPAKVEAGTMLYVANCVF ------------------------------------------------------------ CHGVPGVDRGGNIPNLGYMDASYIENLPNFVFKGPAMVRGMPDFTGKLSGDDVESLKAFI ------------------------------------------------------------ QGTADAIRP --------- >KB5-C20 T-CELL ANTIGEN RE; SWP:Q5R1D3; PDB:1KB5A; QQVRQSPQSLTVWEGETAILNCSYEDSTFNYFPWYQQFPGEGPALLISIRSVSDKKEDGR ---------------------1-------------------------------------- FTIFFNKREKKLSLHITDSQPGDSATYFCAARYQGGRALIFGTGTTVSVSPGSAD ----------------------------1-------------------------- >KAPPA-BUNGAROTOXIN; SWP:P01398; PDB:1KBAA; RTCLISPSSTPQTCPNGQDICFLKAQCDKFCSIRGPVIEQGCVATCPQFRSNYRSLLCCT --1----------2------1-----3---3----------2---4-----------45- TDNCNH ---5-- >KINASE SUPPRESSOR OF RAS; SWP:Q61097; PDB:1KBEA; GSVTHRFSTKSWLSQVCNVCQKSMIFGVKCKHCRLKCHNKCTKEAPACR -----------------------------1-----------------1- >PURPLE ACID PHOSPHATASE; SWP:P80366; PDB:1KBPA; RDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKR ------------------------------------------------------------ IAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPY ------------------------------------------------------------ TFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTER ------------------------------------------------------------ SVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHII ------------------------------------------------------------ VLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFE ------------------------------------------------------------ AWFVKYKVDVVFAGHVHAYERSERVSNIAYKITDGLCTPVKDQSAPVYITIGDAGNYGVI ------------------------------------1----------------------- DSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPV ------------------------------------------------------------ DDST ---- >NKG2D ligand 3 [Precursor; SWP:Q9BZM4; PDB:1KCGC; DAHSLWYNFTIIHLPRHGQQWCEVQSQVDQKNFLSYDCGSDKVLSMGHLEEQLYATDAWG ---------------------1---------------1---------------------- KQLEMLREVGQRLRLELADTEPLTLQVRMSCECEADGYIRGSWQFSFDGRKFLLFDSNNR ------------------------------2----------------------------- KWTVVHAGARRMKEKWEKDSGLTTFFKMVSMRDCKSWLRDFLMHRKKRLE ---------------------------------2---------------- >GELSOLIN; SWP:P06396; PDB:1KCQA; VVQRLFQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLKATQVS ------------------------------1------------1---------------- KGIRDNERSGRARVHVSEEGTEPEAMLQVLGPKPALPAGTEDTA -------------------------------------------- >Major surface antigen [Pr; SWP:P03142; PDB:1KCRH; QVALQESGPGLVKPSQSLSLTCTVTGYSITSDYAWNWIRQFPGNKLEWMGYIRNGGSTTY ---------------------1-------------------------------------- NPSLASRISITRDTSKNQFFLQLNSVTTEDTATYYCARGGTGFTYWGAGTLVTVSAAATT -----------------------------------1------------------------ PPSVYPLAPGSAAAAAAMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSALYTL ----------------------2------------------------------------- SSSVTVPSSPRPSATVTCNVAHPASSTKVDKKIVPRDC -----------------2-------------------- >Major surface antigen [Pr; SWP:P03142; PDB:1KCRL; DIVLTQSPKSMSMSVGERVTLSCKASENVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPD ----------------------1------------------------------------- RFTGSGSATDFTLKISSVQAEDLADYHCGQTYSYPTFGGGTKLAIKRADAAPTVSIFPPS ---------------------------1-------------------------------- SEQLTAGGASVVCFLNNFYPKDINVKWKIDGSERQNGVANSWTAQDSADSTYSMSSTLTL ------------2----------------------------------------------- TKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC ------------2-------------------- >PC287 IMMUNOGLOBULIN; SWP:NA; PDB:1KCUH; QVKLQQSGPGLVKPSQSLSLTCTVTGYSITSDYAWNWIRQFPGNKLEWMAYISYSGSTTY ---------------------1-------------------------------------- NPSLKSRISITRDTSKNQFFLQLNSVTTEDTAIYYCARGGTGFDYWGAGTTLTVSAAATT -----------------------------------1------------------------ PPSVYPLAPGSATAAASMVTLGCLVKGYFPEPVTVTWNSGALSSGVHTFPAVLQSDLYTL ----------------------2------------------------------------- SSSVTVPSSPWPSETVTCNVAHPASSTKVDKKIVPRD -----------------2------------------- >PC287 IMMUNOGLOBULIN; SWP:NA; PDB:1KCUL; DIVLTQSPKSMSMSVGEKVTLSCKASENVDTYVSWYQQRPEQPPALLIYGASNRYTGVPD ----------------------1------------------------------------- RFTGSGSATDFTLTISSVQAEDLADYHCGQSYSYPLTFGGGTKLELKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVANSWTAQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPVVKSFNRNEC -------------2-------------------- >Ig heavy chain V region 1; SWP:P18532; PDB:1KCVH; QVTLSQSGPGLVKPSQSLSLTCTVTSYSITSDYAWNWIRQFAGQSLEWMGYISYSGSTSY ---------------------1-------------------------------------- NPSLKSRISITRDTSKNQFFLQLNSVTTDDTATYYCARGGTGFPYWGTGTNVTVSAASTT -----------------------------------1------------------------ APSVFPLVPGSATAAASAVTLGCLVKGYFPEPVTVAWNEGALSSGVLTVSAVLQSGLYTL ----------------------2------------------------------------- SSNTTVASGTWPSASVTCLVAHPKSSTAADKKIEPKD -----------------2------------------- >Ig heavy chain V region 1; SWP:P18532; PDB:1KCVL; DIVMTQSPKSMGMSVGEAVTLNCKASENVGTYVSWYQQKPGQSPVLLIYGASNRYTGVPD ----------------------1------------------------------------- RFTGSGSATDFTLTISSVQADDDADYYCGQSYSSPLTFGGGTKLELKRADAAPTSSIFPP ---------------------------1-------------------------------- SSEQLSSGGASVVCFLNSFYPKSIAVKWKVDGSKRANGTANSWTDQDSASSTYSMSSTLT -------------2---------------------------------------------- LTKDKYERHNSYTCEATHKTSSSPVVKSFNRNEC -------------2-------------------- >CELLOBIOSE DEHYDROGENASE; SWP:Q01738; PDB:1KDGA; TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDI ------------------------------------------------------------ PGLFESLFTDSNPFWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNH ----------------1--------1---------------------------------- APYTSKLSSRLPSTDHPSTDGQRYLEQSFNVVSQLLKGQGYNQATINDNPNYKDHVFGYS ------------------------------------------------------------ AFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFI ------------------------------------------------------------ PVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLPVGMNA ------------------------------------------------------------ QDNPSINLVFTHPSIDAYENWADVWSNPRPADAAQYLANQSGVFAGASPKLNFWRAYSGS ------------------------------------------------------------ DGFTRYAQGTVRPGAASVNSSLPYNASQIFTITVYLSTGIQSRGRIGIDAALRGTVLTPP ------------------------------------------------------------ WLVNPVDKTVLLQALHDVVSNIGSIPGLTMITPDVTQTLEEYVDAYDPATMNSNHWVSST ------------------------------------------------------------ TIGSSPQSAVVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAGG ------------------------------------------------------------ P - >28B4 FAB; SWP:GC1_MOUSE; PDB:1KELH; EVKLVESGGGLGQPGGSLRLSCATSGFTFTDYYFNWARQPPGKALEWLGFIRNKAKGYTT ---------------------1-------------------------------------- EYSASVKGRFTISRDNSQGILYLQMNTLRAEDSATYYCARWGSYAMDYWGQGTSVTVSSA -------------------------------------1---------------------- KTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDL -------------------------2---------------------------------- YTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP --------------------2----------------- >HEMAGGLUTININ HA1; SWP:NA; PDB:1KENH; DVHLQESGPGLVKPSQSLSLTCYVTGYSITSGYYWTWIRQFPGNKLEWMGYISYDGSNNY ---------------------1-------------------------------------- NPSLKNRISITRDTSKNQFFLKLNSVTAEDTASYYCAAFYYDYDFFFDYWGQGTTLTVSS -----------------------------------1------------------------ AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSD --------------------------2--------------------------------- LYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD ---------------------2------------------- >NEUROPILIN-1; SWP:O14786; PDB:1KEXA; FKCMEALGMESGEIHSDQITASSQYSTNWSAERSRLNYPENGWTPGEDSYREWIQVDLGL --1--------------------------------------------------------- LRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVV ------------------------------------------------------------ AVFPKPLITRFVRIKPATWETGISMRFEVYGCKIT -------------------------------1--- >MONOCLONAL ANTIBODY LIGHT; SWP:NA; PDB:1KFAH; VMLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPERRLEWVATITTRGYTFYPD --------------------1--------------------------------------- SVKGRFTVSRDNARNTLNLQMSSLRSEDTAMFYCTREGLLLDYFTMDYWGQGTSVTVSSA ---------------------------------1-------------------------- KTTPPSVYPLAPSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSV ------------------2----------------------------------------- TVPSSSRPSETVTCNVAHPASSTKVDKKIVPAD -------------2------------------- >CHITINASE B; SWP:Q9REI6; PDB:1KFWA; PLTSTVNGYRNVGYFAQWGVYGRAFQAKQLDVSGTAKNLTHINYSFGNINNQTLTCFMAN -------------------------------------------------------1---- KAQGTGPNGSDGAGDAWADFGMGYAADKSVSGKADTWDQPLAGSFNQLKQLKAKNPKLKV ------------------------------------------------------------ MISLGGWTWSKNFSKAAATEASRQKLVSSCIDLYIKGNLPNFEGRGGAGAAAGIFDGIDI -----------------------------1------------------------------ DWEWPGTNSGLAGNGVDTVNDRANFKALLAEFRKQLDAYGSTNNKKYVLSAFLPANPADI ------------------------------------------------------------ DAGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPADPRAPSKKFSADKAVK ------------------------------------------------------------ KYLAAGIDPKQLGLGLAAYGRGWTGAKNVSPWGPATDGAPGTYETANEDYDKLKTLGTDH ------------------------------------------------------------ YDAATGSAWRYDGTQWWSYDNIATTKQKTDYIVSKGLGGGMWWELSGDRNGELVGAMSDK ------------------------------------------------------------ FRAAAPGPVTEAAPP --------------- >Glycoprotein gp42; SWP:P03205; PDB:1KG0C; HTFQVPQNYTKANCTYCNTREYTFSYKGCCFYFTKKKHTWNGCFQACAEKYPCTYFYGPT -------------1--2------------2------------3---4-----1------- PDILPVVTRNLNAIESLWVGVYRVGEGNWTSLDGGTFKVYQIFGSHCTYVSKFSTVPVSH ----------------------------------------------5------------- HECSFLKPCLCVSQRS --5-----3-4----- >NECROSIS INDUCING PROTEIN; SWP:Q02039; PDB:1KG1A; DRCRYTLCCDGALKAVSACLHESESCLVPGDCCRGKSRLTLCSYGEGGNGFQCPTGYRQC --1----23---------1------2-----45--------3----------4------5 >T-CELL RECEPTOR ALPHA CHA; SWP:NA; PDB:1KGCE; GVSQSPRYKVAKRGQDVALRCDPISGHVSLFWYQQALGQGPEFLTYFQNEAQLDKSGLPS --------------------1--------------------------------------- DRFFAERPEGSVSTLKIQRTQQEDSAVYLCASSLGQAYEQYFGPGTRLTVTEDLKNVFPP -----------------------------1------------------------------ EVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPAL ---------------------2-------------------------------------- NDSRYCLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRA --------------------------2--------------------------------- D - >EPHRIN TYPE-B RECEPTOR 2; SWP:P54763; PDB:1KGYA; AEETLMDSTTATAELGWMVHPPSGWEEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFI -------------------------------------------1---------------- RRRGAHRIHVEMKFSVRDCSSIPSVPGSCKETFNLYYYEADFDLATKTFPNWMENPWVKV ------------------2---------2------------------------------- DTIAADESFSQVDLGGRVMKINTEVRSFGPVSRNGFYLAFQDYGGCMSLIAVRVFYRKCP ---------------------------------------------1-------------- R - >ANGIOSTATIN; SWP:P00747; PDB:1KI0A; LSECKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDP ---1--------------------2---------------------------3------- QGPWCYTTDPEKRYDYCDILECEEECMHCSGENYDGKISKTMSGLECQAWDSQSPHAHGY ----2-----------3----1---4--5-----------------6------------- IPSKFPNKNLKKNYCRNPDRELRPWCFTTDPNKRWELCDIPRCTTPPPSSGPTYQCLKGT --------------7----------6-----------7----4------------8---- GENYRGNVAVTVSGHTCQHWSAQTPHTHERTPENFPCKNLDENYCRNPDGKRAPWCHTTN ----------------9-------------------5-------a----------9---- SQVRWEYCKIPSC -------a----8 >Coagulation factor X [Pre; SWP:P00743; PDB:1KIGH; IVGGRDCAEGECPWQALLVNEENEGFCGGTILNEFYVLTAAHCLHQAKRFTVRVGDRNTE ------1----1--------------2---------------2----------------- QEEGNEMAHEVEMTVKHSRFVKETYDFDIAVLRLKTPIRFRRNVAPACLPEKDWAEATLM ------------------------------------------------------------ >Coagulation factor X [Pre; SWP:P00743; PDB:1KIGL; CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERFPCGKFTQGR 1------2---1--------2-3------------3--------------- >APOLIPOPROTEIN A; SWP:P08519; PDB:1KIV; CYHGNGQSYRGTFSTTVTGRTCQSWSSMTPHRHQRTPENYPNDGLTMNYCRNPDADTGPW 1--------------------2---------------------------3---------- CFTMDPSIRWEYCNLTRC 2-----------3----1 >SERINE PROTEASE INHIBITOR; SWP:O46162; PDB:1KJ0A; EQECTPGQTKKQDCNTCNCTPTGVWACTRKGCPPH ---1---------2--3-1-------3----2--- >LECTIN I; SWP:Q38784; PDB:1KJ1A; RNLLTNGEGLYAGQSLDVEPYHFIMQEDCNLVLYDHSTSVWASNTGILGKKGCKAVLQSD ----------------------------1-----------------------1------- GNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSDIWSTGTYK ------------------------------------------------- >II lectin [Precursor] [Fr; SWP:Q38783; PDB:1KJ1D; RNILMNDEGLYAGQSLDVEPYHLIMQEDCNLVLYDHSTAVWTTNTDIPGKKGCKAVLQSD ----------------------------1-----------------------1------- GNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSDIWSTNTYK ------------------------------------------------- >BETA-DEFENSIN 3; SWP:P81534; PDB:1KJ6A; GIINTLQKYYCRVRGGRCAVLSCLPKEEQIGKCSTRGRKCCRRKK ----------1------2----3---------2------13---- >BETA-2-MICROGLOBULIN; SWP:P16391; PDB:1KJMA; GSHSLRYFYTAVSRPGLGEPRFIAVGYVDDTEFVRFDSDAENPRMEPRARWMEREGPEYW ------------------------------------------------------------ EQQTRIAKEWEQIYRVDLRTLRGYYNQSEGGSHTIQEMYGCDVGSDGSLLRGYRQDAYDG ----------------------------------------1------------------- RDYIALNEDLKTWTAADFAAQITRNKWERARYAERLRAYLEGTCVEWLSRYLELGKETLL -------------------------------------------1---------------- RSDPPEAHVTLHPRPEGDVTLRCWALGFYPADITLTWQLNGEDLTQDMELVETRPAGDGT ----------------------2------------------------------------- FQKWASVVVPLGKEQNYTCRVEHEGLPKPLSQRWEPL ------------------2------------------ >C5A; SWP:P01031; PDB:1KJS; MLQKKIEEIAAKYKHSVVKKCCYDGACVNNDETCEQRAARISLGPRCIKAFTECCVVASQ --------------------12-----------3------------1------23----- LRANISHKDMQLGR -------------- >BETA-2-MICROGLOBULIN; SWP:Q95565; PDB:1KJVA; GSHSLRYFDIAVSRPGLGEPRYISVGYVDDTEFARYDSDAENRRYQPRARWMEREGPEYW ------------------------------------------------------------ ERNTPIYKGKEQTFRVNLRTLRGYYNQSEGGSHTIQEMYGCDVGSDGSLLRGYEQFAYDG ----------------------------------------1------------------- RDYIALNEDLKTWTAADFAARISRNKLERDGFADLHRAYLEGECVESLRRYLELGKETLL -------------------------------------------1---------------- RSDPPKAHVTLHPRPEGDVTLRCWALGFYPADITLTWQLNGEDLTQDMELVETRPAGDGT ----------------------2------------------------------------- FQKWASVVVPLGKEQNYTCRVEHEGLPKPLSQRWEP ------------------2----------------- >MEVALONATE KINASE; SWP:Q58487; PDB:1KKHA; PRGSHMIIETPSKVILFGEHAVVYGYRAISMAIDLTSTIEIKETQEDEIILNLNDLNKSL ------------------------------------------------------------ GLNLNEIKNINPNNFGDFKYCLCAIKNTLDYLNIEPKTGFKINISSKIPISCGLGSSASI ---------------------------------------------------1-------- TIGTIKAVSGFYNKELKDDEIAKLGYMVEKEIQGKASITDTSTITYKGILEIKNNKFRKI ------------------------------------------------------------ KGEFEEFLKNCKFLIVYAEKRKKKTAELVNEVAKIENKDEIFKEIDKVIDEALKIKNKED ------------------------------------------------------------ FGKLMTKNHELLKKLNISTPKLDRIVDIGNRFGFGAKLTGAGGGGCVIILVNEEKEKELL ---------------------------------------------1-------------- KELNKEDVRIFNCRMMN ----------------- >MANNOSYL-OLIGOSACCHARIDE ; SWP:P31723; PDB:1KKTA; SNQAKADAVKEAFQHAWNGYMKYAFPHDELTPVSNGHADSRNGWGASAVDALSTAVIMGK ------------------------------------------------------------ ADVVNAILEHVADIDFSKTSDTVSLFETTIRYLAGMLSGYDLLQGPAKNLVDNQDLIDGL ------------------------------------------------------------ LDQSRNLADVLKFAFDTPSGVPYNNINITSHGNDGATTNGLAVTGTLVLEWTRLSDLTGD ------------------------------------------------------------ EEYAKLSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLIK ------------------------------------------------------------ MYVYDPKRFETYKDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDG --------------------------------------------------------1--- GSFLLGGTVLDRQDFIDFGLELVDGCEATYNSTLTKIGPDSWGWDPKKVPSDQKEFYEKA -------------------------1---------------------------------- GFYISSGSYVLRPEVIESFYYAHRVTGKEIYRDWVWNAFVAINSTCRTDSGFAAVSDVNK ------------------------------------------------------------ ANGGSKYDNQESFLFAEVMKYSYLAHSEDAAWQVQKGGKNTFVYNTEAHPISVAR ------------------------------------------------------- >EUKARYOTIC TRANSLATION IN; SWP:P05198; PDB:1KL9A; LSCRFYQHKFPEVEDVVVNVRSIAEGAYVSLLEYNNIEGILLSELRIGRNECVVVIRVDK ---------------------------------------------------1-------- EKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVF -------------------1---------------------------------------- DDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNINRR --------------------------------------------- >TRANSFORMING GROWTH FACTO; SWP:P18341; PDB:1KLAA; ALDTNYCFSSTEKNCCVRQLYIDFRKDLGWKWIHEPKGYHANFCLGPCPYIWSLDTQYSK ------1-------21---------------------------3---4------------ VLALYNQHNPGASAAPCCVPQALEPLPIVYYVGRKPKVEQLSNMIVRSCKCS -----------------2------------------------------3-4- >LAMININ; SWP:P02468; PDB:1KLO; CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCND 1-2-----1----------2--3--------3--4-----------------4--5-6-- NIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTV ---------5------6--7--------7--8----------------8--9-a------ QQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQGCER -----9------a-b--------b--c------------c-- >HLA class II histocompati; SWP:P13758; PDB:1KLUB; GDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEY --------------1--------------------------------------------- WNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVS ------------------1-------------------------------------2--- GFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSV ----------------------------------------------------2------- TSPLTVEWRA ---------- >CYSTEINE RICH PROTEIN B; SWP:O25103; PDB:1KLXA; GGGTVKKDLKKAIQYYVKACELNEMFGCLSLVSNSQINKQKLFQYLSKACELNSGNGCRF -------------------1-------1---------------------2-------2-- LGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEK -------------------------3-------3-------------------------- ACRLGSEDACGIL -4-------4--- >VASCULAR ENDOTHELIAL GROW; SWP:P15692; PDB:1KMXA; ARQENPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR ------1--2--------------1-2-3------4-----------3-4----- >THIOL:DISULFIDE INTERCHAN; SWP:P30960; PDB:1KNGA; RPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKDK ------------------------------------------1--1-------------- RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIV ------------------------------------------------------------ YKLVGPITPDNLRSVLLPQMEKAL ------------------------ >ENDO-1,4-BETA-XYLANASE A; SWP:P26514; PDB:1KNMA; PPADGGQIKGVGSGRCLDVPDASTSDGTQLQLWDCHSGTNQQWAATDAGELRVYGDKCLD ---------------1------------------1----------------------2-- AAGTSNGSKVQIYSCWGGDNQKWRLNSDGSVVGVQSGLCLDAVGNGTANGTLIQLYTCSN --------------2-----------------------3------------------3-- GSNQRWTRT --------- >ENDOSTATIN; SWP:P39061; PDB:1KOE; QPVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADR --------------------------1--------------------------------- GSVPIVNLKDEVLSPSWDSLFSGSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPS ------------------------------------------------------------ GRRLMESYCETWRTETTGATGQASSLLSGRLLEQKAASCHNSYIVLCIENSF --------2-----------------------------2-------1----- >CARBONIC ANHYDRASE; SWP:Q50940; PDB:1KOPA; HTHWGYTGHDSPESWGNLSEEFRLCSTGKNQSPVNITETVSGKLPAIKVNYKPSMVDVEN ------------------------1----------------------------------- NGHTIQVNYPEGGNTLTVNGRTYTLKQFHFHVPSENQIKGRTFPMEAHFVHLDENKQPLV ------------------------------------------------------------ LAVLYEAGKTNGRLSSIWNVMPMTAGKVKLNQPFDASTLLPKRLKYYRFAGSLTTPPCTE ---------------------------------------------------------1-- GVSWLVLKTYDHIDQAQAEKFTRAVGSENNRPVQPLNARVVIE ------------------------------------------- >VOLTAGE-DEPENDENT CHANNEL; SWP:P60590; PDB:1KOZA; DCVRFWGKCSQTSDCCPHLACKSKWPRNICVWDGSV -1------2-----31----2--------3------ >TOXIN; SWP:P16948; PDB:1KP6A; NNAFCAGFGLSCKWECWCTAHGTGNELRYATAAGCGDHLSKSYYDARAGHCLFSDDLRNQ ----1------1---2-3----------------4---------------4--------- FYSHCSSLNNNMSCRSLSK ----3--------2----- >BETA-2-MICROGLOBULIN; SWP:P13747; PDB:1KPRA; GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYW ------------------------------------------------------------ DRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGCELGPDGRFLRGYEQFAYDG ----------------------------------------1------------------- KDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLL -------------------------------------------1---------------- HLEPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGT ----------------------2------------------------------------- FQKWAAVVVPSGEEQAYTCHVQHEGLPEPVTLRW ------------------2--------------- >KP4 TOXIN; SWP:Q90121; PDB:1KPTA; LGINCRGSSQCGLSGGNLMVRIRDQACGNQGQTWCPGERRAKVCGTGNSISAYVQSTNNC ----1-----2---------------3-------4--------5---------------4 ISGTEACRHLTNLVNHGCRVCGSDPLYAGNDVSRGQLTVNYVNSC ------3----------1--2-----------------------5 >ACTX-HI:OB4219; SWP:P60272; PDB:1KQHA; KCLAEAADCSPWSGDSCCKPYLCSCIFFYPCSCRPKGW -1------2-------31----2-4-----4-3----- >PLASMINOGEN; SWP:P00747; PDB:1KRN; DCYHGDGQSYRGTSSTTTTGKKCQSWSSMTPHRHQKTPENYPNAGLTMNYCRNPDADKGP -1--------------------2---------------------------3--------- WCFTTDPSVRWEYCNLKKC -2-----------3----1 >ENDOGLUCANASE A; SWP:O74705; PDB:1KS5A; QTMCSQYDSASSPPYSVNQNLWGEYQGTGSQCVYVDKLSSSGASWHTEWTWSGGEGTVKS ---1---------------------------1---------------------------- YSNSGVTFNKKLVSDVSSIPTSVEWKQDNTNVNADVAYDLFTAANVDHATSSGDYELMIW ------------------------------------------------------------ LARYGNIQPIGKQIATATVGGKSWEVWYGSTTQAGAEQRTYSFVSESPINSYSGDINAFF ------------------------------------------------------------ SYLTQNQGFPASSQYLINLQFGTEAFTGGPATFTVDNWTASVN ------------------------------------------- >TRANSFORMING GROWTH FACTO; SWP:Q90999; PDB:1KS6A; QLPRLCKFCDVKATTCSNQDQCTSNCNITSICEKNNEVCAAVWRRNDENVTLETICHDPQ -----1--2------3-----3---2-----4------1----------------4---- KRLYGHMLDDSSSEQCVMKEKKDDGGLMFMCSCTGEECNDVLIFSAI ---------------5--------------5-6----6--------- >ENDO-B-1,4-GLUCANASE; SWP:O77044; PDB:1KS8A; MAYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVK ------------------------------------------------------------ FGFPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQG ------------------------------------------------------------ DADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTH ------------------------------------------------------------ ARQLFDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWLYRATNDNTYLNTAESLYD ------------------------------------------------------------ EFGLQNWGGGLNWDSKVSGVQVLLAKLTNKQAYKDTVQSYVNYLINNQQKTPKGLLYIDM ------------------------------------------------------------ WGTLRHAANAAFIMLEAAELGLSASSYRQFAQTQIDYALGDGGRSFVCGFGSNPPTRPHH ------------------------------------------------------------ RSSSCPPAPATCDWNTFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAG ----1------1------------------------------------------------ FQSALAALVALGY ------------- >2-DEHYDROPANTOATE 2-REDUC; SWP:P77728; PDB:1KS9A; MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDF -------1----------------------------1----------------------- LATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTH ------------------------------------------------------------ AARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVN ------------------------------------------------------------ CVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAE ------------------------------------------------------------ NISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESE --------------------------------------------------- >COPPER AMINE OXIDASE; SWP:Q43077; PDB:1KSIA; VQHPLDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKDHVLRYETHPTLVSIPR ------------------------------------------------------------ KIFVVAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPPFIDSV ------------------------------------------------------------ KKRGLNLSEIVCSSFTMGWFGEEKNVRTVRLDCFMKESTVNIYVRPITGITIVADLDLMK -----------1--------------------1--------------------------- IVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKF ------------------------------------------------------------ HIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFG ------------------------------------------------------------ FGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQYGNIMWRHTENGIPNE -------------2-------------------------2-------------------- SIEESRTEVNLIVRTIVTVGNDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKE ------------------------------------------------------------ DLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTET ------------------------------------------------------------ QTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGA ------------------------------------------------------------ FTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPA ------------------------------------------------------------ QEDFPIMPLLSTSFELRPTNFFERNPVLKTLSPRDVAWPGC ----------------------------------------- >LATENT TRANSFORMING GROWT; SWP:P22064; PDB:1KSQA; SADQPKEEKKECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNCEIFPCPVLGTAEF -----------1---------2------------134---------2----3-------- TEMCPKGKGFVPAGE ---4----------- >MHC class II E-beta-k [Pr; SWP:Q31163; PDB:1KT2B; ADLIAYLKQATKGGGGSLVPRGSGGGGSRPWFLEYCKSECHFYNGTQRVRLLVRYFYNLE ---------------------------------------1-------------------- ENLRFDSDVGEFRAVTELGRPDAENWNSQPEFLEQKRAEVDTVCRHNYEIFDNFLVPRRV -------------------------------------------1---------------- EPTVTVYPTKTQPLEHHNLLVCSVSDFYPGNIEVRWFRNGKEEKTGIVSTGLVRNGDWTF ---------------------2-------------------------------------- QTLVMLETVPQSGEVYTCQVEHPSLTDPVTVEW -----------------2--------------- >PLASMA RETINOL-BINDING PR; SWP:P18902; PDB:1KT6A; ERDCRVSSFRVKENFDKARFAGTWYAMAKKDPEGLFLQDNIVAEFSVDENGHMSATAKGR ---1-------------------------------------------------------- VRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIIDTDYETFAVQYSC ---------2-------------------------------------------------3 RLLNLDGTCADSYSFVFARDPSGFSPEVQKIVRQRQEELCLARQYRLIPHNGYCD --------3------------------------------1-------------2- >ALPHA-N-ACETYLGALACTOSAMI; SWP:Q90744; PDB:1KTBA; LENGLARTPPMGWLAWERFRCNVNCREDPRQCISEMLFMEMADRIAEDGWRELGYKYINI --------------------1---2------2---------------------------- DDCWAAKQRDAEGRLVPDPERFPRGIKALADYVHARGLKLGIYGDLGRLTCGGYPGTTLD --1-----------------------------------------------3--------- RVEQDAQTFAEWGVDMLKLDGCYSSGKEQAQGYPQMARALNATGRPIVYSCSWPAYQGGL ---------------------3----------------------------4--------- PPKVNYTLLGEICNLWRNYDDIQDSWDSVLSIVDWFFTNQDVLQPFAGPGHWNDPDMLII ------------4----------------------------------------------- GNFGLSYEQSRSQMALWTIMAAPLLMSTDLRTISPSAKKILQNRLMIQINQDPLGIQGRR ------------------------------------------------------------ IIKEGSHIEVFLRPLSQAASALVFFSRRTDMPFRYTTSLAKLGFPMGAAYEVQDVYSGKI ------------------------------------------------------------ ISGLKTGDNFTVIINPSGVVMWYLCPKA ---------------------------- >THIOLTRANSFERASE; SWP:P12309; PDB:1KTE; AQAFVNSKIQPGKVVVFIKPTCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYL ---------------------1--1----------------------------------- QQLTGARTVPRVFIGKECIGGCTDLESMHKRGELLTRLQQVGAVK --------------------------------------------- >COLLAGEN ALPHA 3(VI) CHAI; SWP:P12111; PDB:1KTHA; ETDICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCAPV ----1--------2---------------3-------2------------3---1--- >ALLERGEN DER P 2; SWP:P49278; PDB:1KTJA; SEVDVKDCANHEIKKVLVPGCHGSEPCIIHRGKPFQLEAVFEANQNTKTAKIEIKASIDG -------1------------2-----2--------------------------------- LEVDVPGIDPNACHYMKCPLVKGQQYDIKYTWNVPKIAPKSENVVVTVKVMGDDGVLACA ------------3----3----------------------------------------1- IATHAKIRD --------- >ANTI-HIS TAG ANTIBODY 3D5; SWP:NA; PDB:1KTRH; QVQLQQSGPEDVKPGASVKISCKASGYTFTDYYMNWVKQSPGKGLEWIGDINPNNGGTSY ---------------------1-------------------------------------- NQKFKGRATLTVDKSSSTAYMELRSLTSEDSSVYYCESQSGAYWGQGTTVTVSA -----------------------------------1------------------ >KALIOTOXIN; SWP:P24662; PDB:1KTX; GVEINVKCSGSPQCLKPCKDAGMRFGKCMNRKCHCTP -------1-----2---3---------1----2-3-- >TRANSFORMING GROWTH FACTO; SWP:P10600; PDB:1KTZA; ENCCVRPLYIDFRQDLGWKWVHEPKGYYANFCSGPCPYLRSASASPCCVPQDLEPLTILY --1----------------------------2---3-----------1------------ YVGRTPKVEQLSNMVVKSCKCS ------------------2-3- >METALLOPROTEINASE; SWP:O57413; PDB:1KUFA; QRFPQRYIELAIVVDHGMYTKYSSNFKKIRKRVHQMVSNINEMCRPLNIAITLALLDVWS ------------------------------------------------------------ EKDFITVQADAPTTAGLFGDWRERVLLKKKNHDHAQLLTDTNFARNTIGWAYVGRMCDEK --------------------------------------------------------1--- YSVAVVKDHSSKVFMVAVTMTHELGHNLGMEHDDKDKCKCDTCIMSAVISDKQSKLFSDC -------------------------------------2-3--3----------------2 SKDYYQTFLTNDNPQCILNAP ---------------1----- >ALPHA-LIKE TOXIN; SWP:P59854; PDB:1KV0A; VRDGYIALPHNCAYGCLNNEYCNNLCTKDGAKIGYCNIVGKYGNACWCIQLPDNVPIRVP -----------1---2-----3---4---------2---------3-4------------ GRCHPA --1--- >TYPE II QUINOHEMOPROTEIN ; SWP:Q8GR64; PDB:1KV9A; AGVDEAAIRATEQAGGEWLSHGRTYAEQRFSPLKQIDASNVRSLGLAWYMDLDNTRGLEA ------------------------------------------------------------ TPLFHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKV --------------------------------------------11-------------- YVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFV ------------------------------------------------------------ SAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPE ------------------------------------------------------------ LDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQ ------------------------------------------------------------ QITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVE ------------------------------------------------------------ APGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFN ------------------------------------------------------------ TAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQ ------------------------------------------------------------ MHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMAGWGGVATLTGGESMNLPGMK ------------------------------------------------------------ NRSRLLVFALDGKAQLPPPAPAPAKVERVPQPVTAAPEQVQAGKQLYGQFCSVCHGMGTI ------------------------------------------------------------ SGGLIPDLRQSSDATREHFQQIVLQGALKPLGMPSFDDSLKPEEVEQIKLYVMSREYEDY ------------------------------------------------------------ MARH ---- >Salt-mediated killer prot; SWP:P19972; PDB:1KVEB; GEATTIWGVGADEAIDKGTPSKNDLQNMSADLAKNGFKGHQGVACSTVKDGNKDVYMIKF --------------------------------------------1--------------- SLAGGSNDPGGSPCSD -------------1-- >RC-RNASE4; SWP:Q9DFY6; PDB:1KVZA; MQDWATFKKKHLTDTWDVDCDNLMPTSLFDCKDKNTFIYSLPGPVKALCRGVIFSADVLS -------------------1----------2-----------------3----------- NSEFYLAECNVKPRKPCKYKLKKSSNRICIRCEHELPVHFAGVGICP --------1-------2-----------4--3-------------4- >PROTEGRIN-3 PRECURSOR; SWP:P32196; PDB:1KWIA; ALSYREAVLRAVDRLNEQSSEANLYRLLELDGTPKPVSFTVKETVCPRPTRQPPELCDFK ---------------------------------------------1----------1--- ENGRVKQCVGTVTLDPLDITCNEVQ -------2------------2---- >PROCARBOXYPEPTIDASE B; SWP:P15086; PDB:1KWMA; HHGGEHFEGEKVFRVNVEDENHINIIRELASTTQIDFWKPDSVTQIKPHSTVDFRVKAED ------------------------------------------------------------ TVTVENVLKQNELQYKVLISNLRNVVEAQFDSRVR -----1------------1---------------- >B LYMPHOCYTE STIMULATOR; SWP:Q9Y275; PDB:1KXGA; VTQDCLQLIADSETPTIQKGSYTFVPWLLSFKRGSALEEKENKILVKETGYFFIYGQVLY ------------------------------------------------------------ TDKTYAMGHLIQRKKVHVFGDELSLVTLFRCIQNMPETLPNNSCYSAGIAKLEEGDELQL ------------------------------1------------1---------------- AIPRENAQISLDGDVTFFGALKLL ------------------------ >DIGA16; SWP:P09464; PDB:1KXOA; DVYHDGACPEVKPVDNFDWSQYHGKWWQVAAYPDHITKYGKCGWAEYTPEGKSVKVSRYS -------1---------------------------------2------------------ VIHGKEYFSEGTAYPVGDSKIGKIYHSYTGVTQEGVFNVLSTDNKNYIIGYFCSYDKKGH ----------------------------------------------------1------- MDLVWVLSRSMVLTGEAKTAVENYLIGSPVVDSQKLVYSDFSECK -------------------------------------------2- >Vitamin D-binding protein; SWP:P02774; PDB:1KXPD; LERGRDYEKNKVCKEFSHLGKEDFTSLSLVLYSRKFPSGTFEQVSQLVKEVVSLTEACCA ------------1--------------------------------------------21- EGADPDCYDTRTSALSAKSCESNSPFPVHPLKHQPQEFPTYVEPTNDEICEAFRKDPKEY ------2------------------------------------------3---------- ANQFMWEYSTNYGQAPLSLLVSYTKSYLSMVGSCCTSASPTVCFLKERLQLKHLSLLTTL ---------------------------------43-------4----------------- SNRVCSQYAAYGEKKSRLSNLIKLAQKVPTADLEDVLPLAEDITNILSKCCESASEDCMA ----5--------------------------------------------65------6-- KELPEHTVKLCDNLSTKNSKFEDCCQEKTAMDVFVCTYFMPAAQLPELPDVELPTNKDVC ----------7------------87----------8-----------------------9 DPGNTKVMDKYTFELSRRTHLPEVFLSKVLEPTLKSLGECCDVEDSTTCFNAKGPLLKKE ---------------------------------------a9-------a----------- LSSFIDKGQELCADYSENTFTEYKKKLAERLKAKLPDATPKELAKLVNKRSDFASNCCSI -----------b--------------------------------------------cb-- NSPPLYCDSEIDAELKNI ------c----------- >ALPHA-AMYLASE, PANCREATIC; SWP:NA; PDB:1KXQE; QVQLVESGGGSVQAGGSLSLSCAASTYTDTVGWFRQAPGKEREGVAAIYRRTGYTYSADS ---------------------1-------------------------------------- VKGRFTLSQDNNKNTVYLQMNSLKPEDTGIYYCATGNSVRLASWEGYFYWGQGTQVTVSS --------------------------------1--------------------------- >ALPHA-AMYLASE, PANCREATIC; SWP:NA; PDB:1KXVC; VQLVESGGGTVPAGGSLRLSCAASGNTLCTYDMSWYRRAPGKGRDFVSGIDNDGTTTYVD --------------------1-------2------------------------------- SVAGRFTISQGNAKNTAYLQMDSLKPDDTAMYYCKPSLRYGLPGCPIIPWGQGTQVTVS ---------------------------------1----------2-------------- >LACCASE; SWP:Q96UT7; PDB:1KYAA; GIGPVADLTITNAAVSPDGFSRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKS ------------------------------------------------------------ TSIHWHGFFQKGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGL ------------------------1-------------------------------2--- RGPFVVYDPNDPAADLYDVDNDDTVITLVDWYHVAAKLGPAFPLGADATLINGKGRSPST ------------------------------------------------------------ TTADLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFA ------------------------2----------------------------------- AQRYSFVLEANQAVDNYWIRANPNFGNVGFTGGINSAILRYDGAAAVEPTTTQTTSTAPL ------------------------------------------------------------ NEVNLHPLVATAVPGSPVAGGVDLAINMAFNFNGTNFFINGASFTPPTVPVLLQIISGAQ ------------------------------------------------------------ NAQDLLPSGSVYSLPSNADIEISFPATAAAPGAPHPFHLHGHAFAVVRSAGSTVYNYDNP ------------------------------------------------------------ IFRDVVSTGTPAAGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVFAEDIPDVASANPV ------------------------------------------------------------ PQAWSDLCPTYDARDPSDQ -------1----------- >MAJOR SURFACE ANTIGEN P30; SWP:P13664; PDB:1KZQA; PLVANQVVTCPDKKSTAAVILTPTENHFTLKCPKTALTEPPTLAYSPNRQICPAGTTSSC ---------1---------------------2-------------------3-------3 TSKAVTLSSLIPEAEDSWWTGDSASLDTAGIKLTVPIEKFPVTTQTFVVGCIKGDDAQSC --------------------------------------------------2--------1 MVTVTVQARASSVVNNVARCSYGADSTLGPVKLSAEGPTTMTLVCGKDGVKVPQDNNQYC -------------------4------------------------5--------------6 SGTTLTGCNEKSFKDILPKLTENPWQGNASSDKGATLTIKKEAFPAESKSVIIGCTGGSP -------6----------------------------------------------5----- EKHHCTVKLEFAG ----4-------- >Tumor suppressor p53-bind; SWP:Q12888; PDB:1KZYC; ALEEQRGPLPLNKTLFLGYAFLLTMATIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAY -------------------------------------------------------1---- QCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLEEQRIL -1---------------------------------------------------------- DWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVV ------------------------------------------------------------ VTDPSCPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFKQHPKYKHDYVSH ---------------------------------------------------- >THERMAL HYSTERESIS PROTEI; SWP:Q9GTP0; PDB:1L0SA; SCTNTNSQLSANSKCEKSTLTNCVDKSEVFGTTCTGSRFDGVTITTSTSTGSRISGPGCK -1------------1-------2----------2------------------------3- ISTCIITGGVPAPSAACKISGCTFSAN ---4------------4----3----- >PEPTIDE METHIONINE SULFOX; SWP:Q9K1N8; PDB:1L1DA; YKKPSDAELKRTLTEEQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYD ------------------------------------------------------------ SGCGWPSFTRPIDAKSVTEHDDFSFNRRTEVRSRAADSHLGHVFPDGPRDKGGLRYCING --1-----------------------------------------------------1--- ASLKFIPLEQDAAGYGALKGEV ---------------------- >RIBONUCLEOSIDE TRIPHOSPHA; SWP:Q59490; PDB:1L1LA; EISLSAEFIDRVKASVKPHWGKLGWVTYKRTYARWLPEKGRSENWDETVKRVVEGNINLD ------------------------------------------------------------ PRLQDSPSLELKQSLTEEAERLYKLIYGLGATPSGRNLWISGTDYQRRTGDSLNNCWFVA -------------------------------------------------------1---- IRPQKYGDSKIVPSYLGKQEKAVSMPFSFLFDELMKGGGVGFSVARSNISQIPRVDFAID ------------------------------------------------------------ LQLVVDETSESYDASVKVGAVGKNELVQDADSIYYRLPDTREGWVLANALLIDLHFAQTN ------------------------------------------------------------ PDRKQKLILDLSDIRPYGAEIHGFGGTASGPMPLISMLLDVNEVLNNKAGGRLTAVDAAD ------------------------------------------------------------ ICNLIGKAVVAGNAELALGSNDDQDFISMKQDQEKLMHHRWASNNSVAVDSAFSGYQPIA ------------------------------------------------------------ AGIRENGEPGIVNLDLSKNYGRIVDGYQAGIDGDVEGTNPCGEISLANGEPCNLFEVFPL ---------------------------------------------------1-------- IAEEQGWDLQEVFALAARYAKRVTFSPYDWEISREIIQKNRRIGISMSGIQDWLLTRLGN ------------------------------------------------------------ RVVTGFKDDFDPETHEAIKVPVYDKRAIKMVDQLYKAVVKADQDYSKTLGCNESIKHTTV ------------------------------------------------------------ KPSGTVAKLAGASEGMHFHYGAYLIQRIRFQDSDPLLPALKACGYRTEADIYTENTTCVE ------------------------------------------------------------ FPIKAVGADNPNFASAGTVSIAEQFATQAFLQTYWSDNAVSCTITFQDSEGDQVESLLRQ ------------------------------------------------------------ YRFITKSTSLLPYFGGSLQQAPKEPIDKETYEKRSQEITGNVEEVFSQLNSDVKDLE --------------------------------------------------------- >Histone acetyltransferase; SWP:Q09472; PDB:1L3EB; MGSGAHTADPEKRKLIQQQLVLLLHAHKCQRREQANGEVRQCNLPHCRTMKNVLNHMTHC -----------------------------------------------------------1 QSGKSCQVAHCASSRQIISHWKNCTRHDCPVCLPLKNAGDK -----1-----------------2----2------------ >INTEGRIN BETA-2:CYSTEINE-; SWP:P05107; PDB:1L3YA; ECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQA -1----2-------3-------2-1--3-4--------4-- >NEUROPHYSIN 1; SWP:P01175; PDB:1L5CA; AVLDLDVRTCLPCGPGGKGRCFGPSICCGDELGCFVGTAEALRCQEENYLPSPCQSGQKP ---------1--2-------3-----24-----4---------3---------1------ CGSGGRCAAAGICCSPDGCEEDPACDPEAAFS 5-----6-----57----7-----6------- >Nicotinate-nucleotide--di; SWP:Q05603; PDB:1L5OA; LHALLRDIPAPDAEAMARTQQHIDGLLKPPGSLGRLETLAVQLAGMPGLNGTPQVGEKAV ------------------------------------------------------------ LVMCADHGVWDEGVAVSPKIVTAIQAANMTRGTTGVCVLAAQAGAKVHVIDVGIDAEPIP ------------------------------------------------------------ GVVNMRVARGCGNIAVGPAMSRLQAEALLLEVSRYTCDLAQRGVTLFGVGELGMANTTPA ------------------------------------1----------------------- AAMVSVFTGSDAKEVVGIGANLPPSRIDNKVDVVRRAIAINQPNPRDGIDVLSKVGGFDL ------------------------------------------------------------ VGMTGVMLGAARCGLPVLLDGFLSYSAALAACQIAPAVRPYLIPSHFSAEKGARIALAHL ------------1----------------------------------------------- SMEPYLHMAMRLGEGSGAALAMPIVEAACAMFHNMGELAASNIVLP ---------------------------------------------- >MATRIX METALLOPROTEINASE-; SWP:P14780; PDB:1L6JA; VLFPGDLRTNLTDRQLAEEYLYRYGYTLGPALLLLQKQLSLPETGELDSATLKAMRTPRC ------------------------------------------------------------ GVPDLGRFQTFEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRV ------------------------------------------------------------ YSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHFDDDELWSLGKGVVVP ------------------------------------------------------------ TRFGNADGAACHFPFIFEGRSYSACTTDGRSDGLPWCSTTANYDTDDRFGFCPSERLYTR ----------1-------------2-----------1--------------2-------- DGNADGKPCQFPFIFQGQSYSACTTDGRSDGYRWCATTANYDRDKLFGFCPTRADSTVMG --------3-------------4-----------3--------------4---------- GNSAGELCVFPFTFLGKEYSTCTSEGRGDGRLWCATTSNFDSDKKWGFCPDQGYSLFLVA -------5-------------6-----------5--------------6----------- AHEFGHALGLDHSSVPEALMYPMYRFTEGPPLHKDDVNGIRHLYG --------------------------------------------- >THIOL:DISULFIDE INTERCHAN; SWP:P36655; PDB:1L6PA; DAPGRSQFVPADQAFAFDFQQNQHDLNLTWQIKDGYYLYRKQIRITPEHAKIADVQLPQG ------------------------------------------------------------ VWHEDEFYGKSEIYRDRLTLPVTINQASAGATLTVTYQGCADAGFCYPPETKTVPLSEVV ---------------------------------------1-----1-------------- A - >MINIMIZED B-DOMAIN OF PRO; SWP:NA; PDB:1L6XB; FNMQCQRRFYEALHDPNLNEEQRNAKIKSIRDDC ----1----------------------------1 >BILIARY GLYCOPROTEIN C; SWP:Q61353; PDB:1L6ZA; EVTIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQA ------------------------------------------------------------ YSGREIIYSNGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNT ------------------------------------------------------------ TVKELDSVTLTCLSNDIGANIQWLFNSQSLQLTERMTLSQNNSILRIDPIKREDAGEYQC -----------1-----------------------------------------------1 EISNPVSVRRSNSIKLDIIFDPS ----------------------- >ANTI-TESTOSTERONE (LIGHT ; SWP:NA; PDB:1L7TH; EVKLVESGGGLVKPGGSLKLSCAASGFTFSRYALSWVRQTADKRLEWVASIVSGGNTYYS ---------------------1-------------------------------------- GSVKGRFTISRDIARNILYLQMSSLRSEDTAMYYCARAYYGYVGLVHWGQGTLVTVSSAK ----------------------------------1------------------------- TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLY ------------------------2----------------------------------- TLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC -------------------2-------------------- >If kappa light chain [Fra; SWP:A2NHM3; PDB:1L7TL; DVVVTQTPLSLPVSLGDQASISCRSSEVIVTRNGYTPIEWYLQKPGQSPKLLIYKAYKRF ----------------------1------------------------------------- PGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFDGSTVPPKFGGGTKLEIKRADAAPTV --------------------------------1--------------------------- SIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSM ------------------2----------------------------------------- SSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRDEC ------------------2-------------------- >ENDOGLUCANASE; SWP:Q8J0K8; PDB:1L8FA; ANGQSTRYWDCCKPSCGWRGKGPVNQPVYSCDANFQRIHDFDAVSGCEGGPAFSCADHSP ----------12---3--------------4---------------2-------4----- WAINDNLSYGFAATALSGQTEESWCCACYALTFTSGPVAGKTMVVQSTSTGGDLGSNHFD ------------------------35-6-------------------------------- LNIPGGGVGLFDGCTPQFGGLPGARYGGISSRQECDSFPEPLKPGCQWRFDWFQNADNPS -------------1--------------------7----------7-------------- FTFERVQCPEELVARTGCRRHDDGGFA -------6---------5--------- >ENDOTHELIAL PROTEIN C REC; SWP:Q9UNN8; PDB:1L8JA; LQRLHMLQISYFRDPYHVWYQGNASLGGHLTHVLEGPDTNTTIIQLQPLQEPESWARTQS ------------------------------------------------------------ GLQSYLLQFHGLVRLVHQERTLAFPLTIRCFLGCELPPEGSRAHVFFEVAVNGSSFVSFR ---------------------------------1-------------------------- PERALWQADTQVTSGVVTFTLQQLNAYNRTRYELREFLEDTCVQYVQKHI -----------------------------------------1-------- >GRANULYSIN; SWP:P22749; PDB:1L9LA; GRDYRTCLTIVQKLKKMVDKPTQRSVSNAATRVCRTGRSRWRDVCRNFMRRYQSRVIQGL ------1--------------------------2----------2--------------- VAGETAQQICEDLR ---------1---- >SGTX1; SWP:P56855; PDB:1LA4A; TCRYLFGGCKTTADCCKHLACRSDGKYCAWDGTF -1------2-----31----2------3------ >CAPSID PROTEIN; SWP:Q86801; PDB:1LAJA; NIASSSAPSLQHPTFIASKKCRAGYTYTSLDVRPTRTEKDKSFGQRLIIPVPVSEYPKKK --------------------1--------------------------------------- VSCVQVRLNPSPKFNSTIWVSLRRLDETTLLTSENVFKLFTDGLAVLIYQHVPTGIQPNN --1--------------------------------------------------------- KITFDMSNVGAEIGDMGKYALIVYSKDDVLEADEMVIHIDIEHQRIPSASTLPV ------------------------------------------------------ >MURAMOYL-PENTAPEPTIDE CAR; SWP:P00733; PDB:1LBU; DGCYTWSGTLSEGSSGEAVRQLQIRVAGYPGTGAQLAIDGQFGPATKAAVQRFQSAYGLA --1--------------------------------------------------------- ADGIAGPATFNKIYQLQDDDCTPVNFTYAELNRCNSDWSGGKVSAATARANALVTMWKLQ --------------------1------------2-------------------------- AMRHAMGDKPITVNGGFRSVTCNSNVGGASNSRHMYGHAADLGAGSQGFCALAQAARNHG ---------------------2---------------------------3---------- FTEILGPGYPGHNDHTHVAGGDGRFWSAPSCGI ------------------------------3-- >FELINE LEUKEMIA VIRUS REC; SWP:P11261; PDB:1LCSA; PHQVYNVTWTITNLVTGTKANATSMLGTLTDAFPTMYFDLCDIIGNTWNPSDQEPFPGYG ----------------------------------------1------------------- CDQPMRRWQQRNTPFYVCPGHANRKQCGGPQDGFCAVWGCETTGETYWRPTSSWDYITVK 1----------------2--------3-------2----3-------------------- KGVTQGIYQCSGGGWCGPCYDKAVHSSTTGASEGGRCNPLILQFTQKGRQTSWDGPKSWG ---------4-----4--5-----------------5----------------------- LRLYRSGYDPIALFSVSRQVMTITP ------------------------- >GROUP X SECRETORY PHOSPHO; SWP:O15496; PDB:1LE6A; GILELAGTVGCVGPRTPIAYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSP ----------1-------------2-3--------------43----56--------7-- KTERYSWQCVNQSVLCGPAENKCQELLCKCDQEIANCLAQTEYNLKYLFYPQFLCEPDSP --------1------8------7----8-6------4-----------------2----- KCD -5- >COMPLEMENT PROTEIN C8GAMM; SWP:P07360; PDB:1LF7A; ASPISTIQPKANFDAQQFAGTWLLVAVGSAGRRAEATTLHVAPQGTAMAVSTFRKLDGIC -----------------------------------------------------------1 WQVRQLYGDTGVLGRFLLQARGARGAVHVVVAETDYQSFAVLYLERAGQLSVKLYARSLP ------------------------------------------------------------ VSDSVLSGFEQRVQEAHLTEDQIFYFPKYGFCEAADQFHVLDEV -------------------------------1------------ >PRION-LIKE PROTEIN; SWP:Q9UKY0; PDB:1LG4A; AENRPGAFIKQGRKLDIDFGAEGNRYYEANYWQFPDGIHYNGCSEANVTKEAFVTGCINA ------------------------------------------1-------------2--- TQAANQGEFQKPDNKLHQQVLWRLVQELCSLKHCEFWLE ----------------------------2----1----- >TRIACYLGLYCEROL LIPASE; SWP:P21811; PDB:1LGYA; KVVAATTAQIQEFTKYAGIAATAYCRSVVPGNKWDCVQCQKWVPDGKIITTFTSLLSDTN ------------------------1----------2--2--------------------- GYVLRSDKQKTIYLVFRGTNSFRSAITDIVFNFSDYKPVKGAKVHAGFLSSYEQVVNDYF ------------------------------------------------------------ PVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDLYQREPRLSPKNLSIFTVGGPRVGNPT ------------------------------------------------------------ FAYYVESTGIPFQRTVHKRDIVPHVPPQSFGFLHPGVESWIKSGTSNVQICTSEIETKDC --------------------------------------------------3--------3 SNSIVPFTSILDHLSYFDINEGSCL -----------------------1- >LQ2; SWP:P45628; PDB:1LIR; FTQESCTASNQCWSICKRLHNTNRGKCMNKKCRCYS -----1-----2---3----------1----2-3-- >BETA-2-MICROGLOBULIN; SWP:P01901; PDB:1LK2A; GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRARWMEQEGPEYW ------------------------------------------------------------ ERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVISGCEVGSDGRLLRGYQQYAYDG ----------------------------------------1------------------- CDYIALNEDLKTWTAADMAALITKHKWEQAGEAERLRAYLEGTCVEWLRRYLKNGNATLL -------------------------------------------1---------------- RTDSPKAHVTHHSRPEDKVTLRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGT ----------------------2------------------------------------- FQKWASVVVPLGKEQYYTCHVYHQGLPEPLTLRW ------------------2--------------- >Beta-2-microglobulin [Pre; SWP:P01887; PDB:1LK2B; IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDW ------------------------1----------------------------------- SFYILAHTEFTPTETDTYACRVKHDSMAEPKTVYWDRDM -------------------1------------------- >INTERLEUKIN-10; SWP:NA; PDB:1LK3H; QVNLLQSGAALVKPGASVKLSCKASGYTFTDFYIHWVKQSHGKSLEWIGYINPNSGYTNY ---------------------1-------------------------------------- NEKFKNKATLTVDKSTSTGYMELSRLTSEDSANYSCTRGVPGNNWFPYWGQGTLVTVSSA -----------------------------------1------------------------ ETTAPSVYPLAPGTALKSNSMVTLGCLVKGYFPEPVTVTWNSGALSSGVHTFPAVLQSGL -------------------------2---------------------------------- YTLTSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPR --------------------2------------------ >INTERLEUKIN-10; SWP:NA; PDB:1LK3L; DTVLTQPPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPAR ---------------------1-------------------------------------- FSGSGSGTDFTLTIDPVEADDTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPS --------------------------1--------------------------------- TEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSL ------------2----------------------------------------------- TKADYESHNLYTCEVVHKTSSSPVVKSFNR ------------2----------------- >LEUKEMIA INHIBITORY FACTO; SWP:P09056; PDB:1LKI; NATCAIRHPCHGNLMNQIKNQLAQLNGSANALFISYYTAQGEPFPNNVEKLCAPNMTDFP ---1-----2-----------------------------------------3-------- SFHGNGTEKTKLVELYRMVAYLSASLTNITRDQKVLNPTAVSLQVKLNATIDVMRGLLSN ------------------------------------------------------------ VLCRLCNKYRVGHVDVPPVPDHSDKEAFQRKKLGCQLLGTYKQVISVVVQAF --2--1----------------------------3----------------- >HEMOCYANIN (SUBUNIT TYPE ; SWP:P04253; PDB:1LLA; LHDKQIRICHLFEQLSSATHSDRLKNVGKLQPGAIFSCFHPDHLEEARHLYEVFWEAGDF ------------------------------------------------------------ NDFIEIAKEARTFVNEGLFAFAAEVAVLHRDDCKGLYVPPVQEIFPDKFIPSAAINEAFK ------------------------------------------------------------ KESPILVDVTGNILDPEYRLAYYREDVGINAHHWHWHLVYPSTWNPKYFGKKKDRKGELF ------------------------------------------------------------ YYMHQQMCARYDCERLSNGMHRMLPFNNFDEPLAGYAPHLTHVASGKYYSPRPDGLKLRD ------------------------------------------------------------ LGDIEISEMVRMRERILDSIHLGYVISEDGSHKTLDELHGTDILGALVESSYESVNHEYY ------------------------------------------------------------ GNLHNWGHVTMARIHDPDGRFHEEPGVMSDTSTSLRDPIFYNWHRFIDNIFHEYKNTLKP ------------------------------------------------------------ YDHDVLNFPDIQVQDVTLHARVDNVVHTFMREQELELKHGINPGNARSIKARYYHLDHEP ------------------------------------------------------------ FSYAVNVQNNSASDKHATVRIFLAPKYDELGNEIKADELRRTAIELDKFKTDLHPGKNTV ------------------------------------------------------------ VRHSLDSSVTLSHQPTFEDLLHGVGLSEYCSCGWPSHLLVPKGNIKGMEYHLFVMLTDWD -----------------------------1-2---------------------------- KDKVSVACVDAVSYCGARDHKYPDKKPMGFPFDRPIHTEHISDFLTNNMFIKDIKIKFHE -------1------2--------------------------------------------- >LIPASE 3; SWP:P32947; PDB:1LLFA; APTAKLANGDTITGLNAIINEAFLGIPFAEPPVGNLRFKDPVPYSGSLNGQKFTSYGPSC -----------------------------------------------------------1 MQQNPEGTFEENLGKTALDLVMQSKVFQAVLPQSEDCLTINVVRPPGTKAGANLPVMLWI ------------------------------------1----------------------- FGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLK ------------------------------------------------------------ DQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQ ------------------------------------------------------------ SGAMVPSDPVDGTYGNEIYDLFVSSAGCGSASDKLACLRSASSDTLLDATNNTPGFLAYS ---------------------------2--------2----------------------- SLRLSYLPRPDGKNITDDMYKLVRDGKYASVPVIIGDQNDEGTIFGLSSLNVTTNAQARA ------------------------------------------------------------ YFKQSFIHASDAEIDTLMAAYPQDITQGSPFDTGIFNAITPQFKRISAVLGDLAFIHARR ------------------------------------------------------------ YFLNHFQGGTKYSFLSKQLSGLPIMGTFHANDIVWQDYLLGSGSVIYNNAFIAFATDLDP ------------------------------------------------------------ NTAGLLVNWPKYTSSSQSGNNLMMINALGLYTGKDNFRTAGYDALMTNPSSFFV ------------------------------------------------------ >ANTIVIRAL PROTEIN 3; SWP:Q40772; PDB:1LLNA; NIVFDVENATPETYSNFLTSLREAVDKLTCHGMIMATTLTEQPYVLVDLFGSGTFTLAIR -----------------------------1------------------------------ RGNLYLEGYSDIYNGKCRYRIFDSESDAQETVCPGDKSKPGTQNNIPYESYKGMESKGGA ----------------2---------------2--------------------------- RTKLGLGITLKSRMGIYGKDATDQKQYQKNEAEFLLIAVQMVTEASRFYIENVAKFDDAN ------------------------------------------------------------ GYQPDPAISLEKNWDSVSVIAKVGTSGDSTVTLPGDLDENNKPWTTATMNDLKNDIMALL ------------------------------------------------------------ THVTCKVK ----1--- >LIGNIN PEROXIDASE; SWP:P49012; PDB:1LLP; ATCANGKTVGDASCCAWFDVLDDIQANMFHGGQCGAEAHESIRLVFHDSIAISPAMEAKG --1----------21------------------3-------------------------- KFGGGGADGSIMIFDTIETAFHPNIGLDEVVAMQKPFVQKHGVTPGDFIAFAGAVALSNC -----------------------------------------------------------3 PGAPQMNFFTGRKPATQPAPDGLVPEPFHTVDQIIARVNDAGEFDELELVWMLSAHSVAA ------------------------------------------------------------ VNDVDPTVQGLPFDSTPGIFDSQFFVETQFRGTLFPGSGGNQGEVESGMAGEIRIQTDHT ------------------------------------------------------------ LARDSRTACEWQSFVGNQSKLVDDFQFIFLALTQLGQDPNAMTDCSDVIPLSKPIPGNGP --------4-----------------------------------2--------------- FSFFPPGKSHSDIEQACAETPFPSLVTLPGPATSVARIPPHKA ----------------4-------------------------- >FIBRILLIN 1; SWP:P35555; PDB:1LMJA; TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGV -----1------2----1--------2-3-------------3-----4------5---- CHNTEGSYRCECPPGHQLSPNISACI 4--------5-6------------6- >ANTI-PHOSPHATIDYLINOSITOL; SWP:NA; PDB:1LMKA; VQLQQSGTELMKPGRSLKISCKTTGYIFSNYWIEWVKQRPGHGLEWIGKILPGGGSNTYN --------------------1--------------------------------------- DKFKGKATFTADTSSNIAYMQLSSLTSEDSAVYYCARGEDYYAYWYVLDYWGQGTTVTVS ----------------------------------1------------------------- SGGGGSDIELTQSPLSLPVSLGDQASISCRSSQSLVHSNGNTSLHWYLKKPGQSPKLLIY ----------------------------2------------------------------- KVSTRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPFTFGSGTKLELK --------------------------------------2------------------- >LEISHMANOLYSIN; SWP:P08148; PDB:1LML; VVRDVNWGALRIAVSTEDLTDPAYHCARVGQHVKDHAGAIVTCTAEDILTNEKRDILVKH -------------------------1----------------1----------------- LIPQAVQLHTERLKVQQVQGKWKVTDMVGDICGDFKVPQAHITEGFSNTDFVMYVASVPS -------------------------------2---------------------------- EEGVLAWATTCQTFSDGHPAVGVINIPAANIASRYDQLVTRVVTHEMAHALGFSGPFFED ----------2------------------------------------------------- ARIVANVPNVRGKNFDVPVINSSTAVAKAREQYGCDTLEYLEVEDQGGAGSAGSHIKMRN ----------------------------------3------------------------- AQDELMAPAAAAGYYTALTMAIFQDLGFYQADFSKAEVMPWGQNAGCAFLTNKCMEQSVT ----------------------------------------------3------4------ QWPAMFCNAIRCPTSRLSLGACGVTRHPGLPPYWQYFTDPSLAGVSAFMDYCPVVVPYSD ------5----6---------5-----------------------------4-------- GSCTQRASEAHASLLPFNVFSDAARCIDGAFRPKASYAGLCANVQCDTATRTYSVQVHGS --7----------------------6--------------7----8-------------- NDYTNCTPGLRVELSTVSNAFEGGGYITCPPYVEVCQGNVQAAKD -----9----------------------9------8--------- >PSALMOTOXIN 1; SWP:P60514; PDB:1LMMA; EDCIPKWKGCVNRHGDCCEGLECWKRRRSFEVCVPKTPKT --1------2------31----2---------3------- >LYSOZYME; SWP:P11941; PDB:1LMQ; KVYDRCELARALKASGMDGYAGNSLPNWVCLSKWESSYNTQATNRNTDGSTDYGIFQINS -----1-----------------------2------------------------------ RYWCDDGRTPGAKNVCGIRCSQLLTDDLTVAIRCAKRVVLDPNGIGAWVAWRLHCQNQDL ---3-----------4---3-------------4--------------------2----- RSYVAGCGV ------1-- >PHOSPHATIDYLCHOLINE TRANS; SWP:Q9UKL6; PDB:1LN1A; FSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKKTGLYEYKVFGVLEDCSPTL -------------------------------------------------------1---- LADIYMDSDYRKQWDQYVKELYEQECNGETVVYWEVKYPFPMSNRDYVYLRQRRDLDMEG ------------------------------------------------------------ RKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGKKGSKVFMYYFDNPGGQIPSWL ------------------------------------------------------------ INWAAKNGVPNFLKDMARACQNY -------------------1--- >GUANYL-SPECIFIC RIBONUCLE; SWP:P05798; PDB:1LNIA; DVSGTVCLSALPPEATDTLNLIASDGPFPYSQDGVVFQNRESVLPTQSYGYYHEYTVITP ------1----------------------------------------------------- GARTRGTRRIITGEATQEDYYTGDHYATFSLIDQTC -----------------------------------1 >HEMOCYANIN; SWP:P83040; PDB:1LNLA; NLVRKSVRNLSPAERASLVAALKSLQEDSSADGFQSLASFHAQPPLCPAPAANKAFACCV ----------------------------------------------1----------1-- HGMATFPEWHRLYTVQFEDALRRHGSVVGIPYWDTVVPQEDLPAFFNDEIWDDALFHANF ------------------------------------------------------------ TNPFNGADIDFNHQKIARDINVDKLAKEGPKGYDTWSFKQYIYALEQEDYCDFEVQFEIA --------------------------------------------------2--------- HNAIHAWVGGTEEYSMGHLHYASYDPVFILHHSNTDRLFALWQELQKFRGHDPNEVNCAL ---------------------------------------------------------2-- EMMREPLKPFSFGAPYNLNPTTKEHSKPEDTFDYKGHFHYEYDHLELQGMNVQRLHDYIN ------------------------------------------------------------ QQKEADRVFAGFLLEGIGTSAHLDFSICAIDGECTHAGYFDVLGGSLETPWQFDRLYKYE ---------------------------3-----3-------------------------- ITDVLESKGLDVHDVFDIKITQTSWDNEDISTDRFPPPSVIYVPK --------------------------------------------- >IF KAPPA LIGHT CHAIN; SWP:NA; PDB:1LO0Y; EVKLVESGGGLVKPGGSLKLSCAASGFSFRNYGMSWVRQTPEKRLEWVASISYGGLIYYP ---------------------1-------------------------------------- DSIKGRFTISRDIAQNILYLQMSSLRSEDTAMYHCIRGDSFLV ----------------------------------1-------- >IF KAPPA LIGHT CHAIN; SWP:NA; PDB:1LO4H; ELKLVETGGDLVKPGGSLTLSCEASGFTLRTYGMSWVRQTPQMRLEWVASISYGGLLYFS ---------------------1-------------------------------------- DSVKGRFTISRDIVRNILTLQMSRLRSEDTAIYYCARGTSFVRYFDVWGAGTTVTVSSAK ----------------------------------1------------------------- TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLY ------------------------2----------------------------------- TLSSSVTVTSSTWPSQSITCNVAHPASSTQVDKKIVPRAA -------------------2-------------------- >BETA-2-MICROGLOBULIN; SWP:NA; PDB:1LP9E; MDSVTQTEGLVTLTEGLPVMLNCTYQSTYSPFLFWYVQHLNEAPKLLLKSFTDNKRPEHQ ----------------------1------------------------------------- GFHATLHKSSSSFHLQKSSAQLSDSALYYCALFLASSSFSKLVFGQGTSLSVVPNIQNPE -----------------------------1------------------------------ PAVYQLKDPRSQDSTLCLFTDFDSQINVPKTMESGTFITDKTVLDMKAMDSKSNGAIAWS ----------------2------------------------------------------- NQTSFTCQDIFKET ------2------- >LIPASE; SWP:P02703; PDB:1LPBA; GIIINLDEGELCLNSAQCKSNCCQHDTILSLSRCALKARENSECSAFTLYGVYYKCPCER -----------1-----2---31----------2---------4-----------3-5-- GLTCEGDKSLVGSITNTNFGICHNV ---4-----------------5--- >DIHYDROLIPOAMIDE DEHYDROG; SWP:P14218; PDB:1LPFA; SQKFDVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALL -----------------------------------------------1----1------- DSSYKYHEAKEAFKVHGIEAKGVTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEGH ------------------------------------------------------------ GKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLSDDIIVDSTGALEFQAVP ------------------------------------------------------------ KKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQIAKEALKVLTKQGLNIRL ------------------------------------------------------------ GARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGFI ------------------------------------------------------------ YVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTHP ------------------------------------------------------------ EIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVIG ------------------------------------------------------------ PSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHIA ---------------------------------------------------- >OSMOTICAL INDUCIBLE PROTE; SWP:P75170; PDB:1LQLA; MDKKYDITAVLNEDSSMTAISDQFQITLDARPKHTAKGFGPLAALLSGLAACELATANLM ---------------------------------------------------1-------- APAKMITINKLLMNVTGSRSTNPTDGYFGLREINLHWEIHSPNSETEIKEFIDFVSKRCP ----------------------------------------------------------1- AHNTLQGVSQLKINVNVTLVH --------------------- >Viral interleukin-10 homo; SWP:P17150; PDB:1LQSL; TKPQCRPEDYATRLQDLRVTFHRVKPTLQREDDYSVWLDGTVVKGCWGCSVMDWLLRRYL ----1-------------------------------------------2----------- EIVFPAGDHVYPGLKTELHSMRSTLESIYKDMRQCPLLGCGDKSVISRLSQEAERKSDNG ----------------------------------1----2-------------------- TRKGLSELDTLFSRLEEYLHSR ---------------------- >AUXIN BINDING PROTEIN 1; SWP:P13689; PDB:1LR5A; SCVRDNSLVRDISQMPQSSYGIEGLSHITVAGALNHGMKEVEVWLQTISPGQRTPIHRHS -1---------------------------------------------------------- CEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVL ------------------------------------------------------------ VIISRPPAKIFLYDDWSMPHTAAVLKFPFVWDEDCFEAAK ----------------------------------1----- >FOLLISTATIN; SWP:P21674; PDB:1LR7A; ETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKE --1----2-----1---------2-3---4---------5----------4------3-- QPELEVQYQGKCK -----------5- >BETA-ELICITIN CRYPTOGEIN; SWP:P15570; PDB:1LRIA; TACTASQQTAAYKTLVSILSDASFNQCSTDSGYSMLTAKALPTTAQYKLMCASTACNTMI --1-----------------------2-----------------------3----2---- KKIVTLNPPNCDLTVPTSGLVLNVYSYANGFSNKCSSL ----------1-----------------------3--- >METHANOL DEHYDROGENASE SU; SWP:P12293; PDB:1LRWA; NDQLVELAKDPANWVMTGRDYNAQNYSEMTDINKENVKQLRPAWSFSTGVLHGHEGTPLV ------------------------------------------------------------ VGDRMFIHTPFPNTTFALDLNEPGKILWQNKPKQNPTARTVACCDVVNRGLAYWPGDDQV ------------------------------------------11---------------- KPLIFRTQLDGHIVAMDAETGETRWIMENSDIKVGSTLTIAPYVIKDLVLVGSSGAELGV ------------------------------------------------------------ RGYVTAYDVKSGEMRWRAFATGPDEELLLAEDFNAPNPHYGQKNLGLETWEGDAWKIGGG ------------------------------------------------------------ TNWGWYAYDPEVDLFYYGSGNPAPWNETMRPGDNKWTMAIWGREATTGEAKFAYQKTPHD ------------------------------------------------------------ EWDYAGVNVMMLSEQEDKQGQMRKLLTHPDRNGIVYTLDRTNGDLISADKMDDTVNWVKE ------------------------------------------------------------ VQLDTGLPVRDPEFGTRMDHKARDICPSAMGYHNQGHDSYDPERKVFMLGINHICMDWEP -------------------------2----------------------------2----- FMLPYRAGQFFVGATLTMYPGPKGDRGNASGLGQIKAYDAISGEMKWEKMERFSVWGGTM ------------------------------------------------------------ ATAGGLTFYATLDGFIKARDSDTGDLLWKFKLPSGVIGHPMTYKHDGRQYVAIMYGVGGW ------------------------------------------------------------ PGVGLVFDLADPTAGLGSVGAFKRLQEFTQMGGGVMVFSLDGESPYSDPNVGEYAPGEPT ------------------------------------------------------------ >PLASMEPSIN IV; SWP:Q8IM16; PDB:1LS5A; SENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCDSIGCSTKHLYDA ----------------------------------------------1----1-------- SASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLPYKFIEVTDADDLEPIYSGSEF ------------------------------------------------------------ DGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYLPVHDKHVGYLTIGGIESDFYEG ------------------------------------------------------------ PLTYEKLNHDLYWQIDLDIHFGKYVMQKANAVVDSGTSTITAPTSFLNKFFRDMNVIKVP ------------------------------------------------------------ FLPLYVTTCDNDDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPALCMLYILPVDIDDNTFI --------2-----------------------------------2--------------- LGDPFMRKYFTVFDYEKESVGFAVAKNL ---------------------------- >LIPOVITELLIN (LV-1N, LV-1; SWP:Q91062; PDB:1LSHA; FQPGKVYRYSYDAFSISGLPEPGVNRAGLSGEMKIEIHGHTHNQATLKITQVNLKYFLGP ------------------------------------------------------------ WPSDSFYPLTGGYDHFIQQLEVPVRFDYSAGRIGDIYAPPQVTDTAVNIVRGILNLFQLS ------------------------------------------------------------ LKKNQQTFELQETGVEGICQTTYVVQEGYRTNEMAVVKTKDLNNCDHKVYKTMGTAYAER ------------------1-------------------------1--------------- CPTCQKMNKNLRSTAVYNYAIFDEPSGYIIKSAHSEEIQQLSVFDIKEGNVVIESRQKLI 2--2-------------------------------------------------------- LEGIQSAPAASQAASLQNRGGLMYKFPSSAITKMSSLFVTKGKNLESEIHTVLKHLVENN ------------------------------------------------------------ QLSVHEDAPAKFLRLTAFLRNVDAGVLQSIWHKLHQQKDYRRWILDAVPAMATSEALLFL ------------------------------------------------------------ KRTLASEQLTSAEATQIVASTLSNQQATRESLSYARELLNTSFIRNRPILRKTAVLGYGS ------------------------------------------------------------ LVFRYCANTVSCPDELLQPLHDLLSQSSDRAKEEEIVLALKALGNAGQPNSIKKIQRFLP -----3-----3------------------------------------------------ GQGKSLDEYSTRVQAEAIMALRNIAKRDPRKVQEIVLPIFLNVAIKSELRIRSCIVFFES ------------------------------------------------------------ KPSVALVSMVAVRLRREPNLQVASFVYSQMRSLSRSSNPEFRDVAAACSVAIKMLGSKLD ------------------------------------------------------------ RLGCRYSKAVHVDTFNARTMAGVSADYFRINSPSGPLPRAVAAKIRGQGMGYASDIVEFG ------------------------------------------------------------ LRAEGLQELLYDWKSVPEERPLASGYVKVHGQEVVFAELDKKMQEQIGAVVSKLEQGMDV ------------------------------------------------------------ LLTKGYVVSEVRYMQPVCIGIPMDLNLLVSGVTTNRANLSASFSSLPADMKLADLLATNI ------------------------------------------------------------ ELRVAATTSMSQHAVAIMGLTTDLAKAGMQTHYKTSAGLGVNGKIEMNARESNFKASLKP ------------------------------------------------------------ FQQKTVVVLSTMESIVFVRDPSGSRILPVLPPKMTQKQIHDIMTARPVMRRKQSCSKSAA ------------------------------------------------------------ LSSKVCFSARLRNAAFIRNALLYKITGDYVSKVYVQPTSSKAQITKVELELQAG ------------------------------------------------------ >Vitellogenin [Precursor]; SWP:Q91062; PDB:1LSHB; SKPKVVIVLRAVRADGKQQGLQTTLYYGLTSNGLPKAKIVAVELSDLSVWKLCAKFRLSA ----------------------------------------------------1------- HMKAKAAIGWGKNCQQYRAMLEASTGNLQSHPAARVDIKWGRLPSSLQRAKNALLENGAP -------------1---------------------------------------------- VIASKLEMEIMPKANQKHQVSVILAAMTPRRMNIIVKLPKVTYFQQGILLPFTF ------------------------------------------------------ >LSIII; SWP:P01379; PDB:1LSI; RECYLNPHDTQTCPSGQEICYVKSWCNAWCSSRGKVLEFGCAATCPSVNTGTEIKCCSAD --1---------2------1-----3---3----------2---4----------45--- KCNTYP -5---- >THROMBOSPONDIN 1; SWP:P07996; PDB:1LSLA; QDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARETKACKKDACPING -------------1---2----------3-----------3---------1----2---- GWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDVTENQICNKQDC ----------4---5----------6-----------6---------4----5 >LYSINE, ARGININE, ORNITHI; SWP:P02911; PDB:1LST; ALPQTVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLK -------------------------------------1------1--------------- AKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQPTLESLKGKHVGVLQGS ------------------------------------------------------------ TQEAYANDNWRTKGVDVVAYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKEYAF ------------------------------------------------------------ AGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALTELRQDGTYDKMAKKYFDFNVYGD ---------------------------------------------------------- >BETAINE-HOMOCYSTEINE METH; SWP:NA; PDB:1LT7A; KGILERLNAGEIVIGDGGFVFALEKRGYHPEAVRQLHREFLRAGSNVMQTFTVNEAAADI ------------------------------------------------------------ ARQVADEGDALVAGGVSQTPSYLSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEE ------------------------------------------------------------ AVWAVETLIASGKPVAATMAIGPEGDLHGVPPGEAAVRLVKAGASIIGVNCHFDPTISLK --------------------------------------------------1--------- TVKLMKEGLEAAQLKAHLMSQPLAYHTPDANKQGFIDLPEFPFGLEPRVATRWDIQKYAR ------------------------------------------------------------ EAYNLGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPRARARKEYWENLRIASGRPYNPS ------------1----------------------------------------------- MSKPD ----- >VENOM TOXIN PEPTIDE MTX4; SWP:Q7YT39; PDB:1LU8A; GCLEFWWKCNPNDDKCCRPKLKCSKLFKLCNFSF -1------2------31-----2------3---- >GSMTX2; SWP:P60273; PDB:1LUPA; YCQKWMWTCDEERKCCEGLVCRLWCKRIINM -1------2-----31----2---3------ >DIHYDROLIPOAMIDE DEHYDROG; SWP:P09063; PDB:1LVL; QQTIQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQ ------------------------------------------1----1------------ FHQASRFTEPSPLGISVASPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV ------------------------------------------------------------ LDGKQVEVDGQRIQCEHLLLATGSSSVELPMLPLGGPVISSTEALAPKALPQHLVVVGGG ------------------------------------------------------------ YIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYEN ------------------------------------------------------------ GCLLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGAAIAIDERCQTSMHNV ------------------------------------------------------------ WAIGDVAGEPMLAHRAMAQGEMVAEIIAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQAS ------------------------------------------------------------ QQGLDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQS ------------------------------------------------------------ LEMGACLEDVAGTIHAHPTLGEAVQEAALRALGHALHI -------------------------------------- >PUTATIVE SECRETED PROTEIN; SWP:Q9Z4W2; PDB:1LWBA; APADKPQVLASFTQTSASSQNAWLAANRNQSAWAAYEFDWSTDLCTQAPDNPFGFPFNTA --------------------------------------------1--------------- CARHDFGYRNYKAAGSFDANKSRIDSAFYEDMKRVCTGYTGEKNTACNSTAWTYYQAVKI 1----------------------------------2----------2------------- FG -- >Fibrinogen beta chain [Fr; SWP:P02678; PDB:1LWUB; AQKEIENRYKEVKIRIESTVAGSLRSMKSVLEHLRAKMQRMEEAIKTQKELCSAPCTVNC -----------------------------------------------------------1 RVPVVSGMHCEDIYRNGGRTSEAYYIQPDLFSEPYKVFCDMESHGGGWTVVQNRVDGSSN ---------2----------------------------2--------------------- FARDWNTYKAEFGNIAFGNGKSICNIPGEYWLGTKTVHQLTKQHTQQVLFDMSDWEGSSV -----------------------1------------------------------------ YAQYASFRPENEAQGYRLWVEDYSGNAGNALLEGATQLMGDNRTMTIHNGMQFSTFDRDN ------------------------------------------------------------ DNWNPGDPTKHCSREDAGGWWYNRCHAANPNGRYYWGGIYTKEQADYGTDDGVVWMNWKG -----------3------------3----------------------------------- SWYSMRQMAMKLRPK --------------- >Fibrinogen gamma chain [P; SWP:P04115; PDB:1LWUC; KTVQKILEEVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQLVDIRQTCSRPCQDTT ------------------------------------------------------------ ANKISPITGKDCQQVVDNGGKDSGLYYIKPLKAKQPFLVFCEIENGNGWTVIQHRHDGSV -----------1----------------------------1------------------- NFTRDWVSYREGFGYLAPTLTTEFWLGNEKIHLLTGQQAYRLRIDLTDWENTHRYADYGH ------------------------------------------------------------ FKLTPESDEYRLFYSMYLDGDAGNAFDGFDFGDDPQDKFYTTHLGMLFSTPERDNDKYEG ------------------------------------------------------------ SCAEQDGSGWWMNRCHAGHLNGKYYFGGNYRKTDVEFPYDDGIIWATWHDRWYSLKMTTM -2------------2--------------------------------------------- KLLPMGRDLSGHGGQQQ ----------------- >BONE MORPHOGENETIC PROTEI; SWP:P18075; PDB:1LXIA; QACKKHELYVSFRDLGWQDWIIAPEGYAAYYCEGECAFPLNSYMNATNHAIVQTLVHFIN --1----------------------------2---3------------------------ PETVPKPCCAPTQLNAISVLYFDDSSNVILKKYRNMVVRACGCH --------1-------------------------------2-3- >COMPLEMENT RECEPTOR TYPE ; SWP:P20023; PDB:1LY2A; EASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPA ---1---------------------------2-------------1-------------- PKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWG --2--------3--------------------------4-------------3------- PTRLPTCVSI ------4--- >n/a; SWP:P07339; PDB:1LYBA; GPIPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYN --------------------------1------------------2------2------- SDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQ -----------------------------------1- >Cathepsin D [Precursor]; SWP:P07339; PDB:1LYBB; GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIF ------------------------------------------------------------ SFYLSRDPDAQPGGELMLGGTDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTLCKEG --------------------------------------------------------1--- CEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQGEYMIPCEKVSTLPAITLKLGGKGYKL 1--------------------------------------2-------------------- SPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEA ----------------2------------------------------------------- A - >BETA-2-MICROGLOBULIN; SWP:P30460; PDB:1M05A; GSHSMRYFDTAMSRPGRGEPRFISVGYVDDTQFVRFDSDAAPWIEQEGPEYWDRNTQIFK ------------------------------------------------------------ TNTQTDRESLRNLRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHNQYAYDGKDYIALNE --------------------------------1--------------------------- DLRSWTAADTAAQITQRKWEAARVAEQDRAYLEGTCVEWLRRYLENGKDTLERADPPKTH -----------------------------------1------------------------ VTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVV --------------2--------------------------------------------- VPSGEEQRYTCHVQHEGLPKPLTLRWEPS ----------2------------------ >RIBONUCLEASE; SWP:P11916; PDB:1M07A; NWATFQQKHIINTPIINCNTIMDNNIYIVGGQCKRVNTFIISSATTVKAICTGVINMNVL -----------------1--------------2-----------------3--------- STTRFQLNTCTRTSITPRPCPYSSRTETNYICVKCENQYPVHFAGIGRCP ---------1---------2-----------4--3-------------4- >TRANSCRIPTION ANTITERMINA; SWP:O67757; PDB:1M1HA; QVQELEKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAQGKEKY ------------------------------------------------------------ RLSLKGNARDISVLGKKGVTTFRIENGEVKVVESVEGDTCVNAPPISKPGQKITCKENKT ---------------------------------------1--------------1----- EAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGGKPVPLKEEEVQNILNQI ------------------------------------------------------------ KR -- >TOXIN BMTX3; SWP:Q9NBG9; PDB:1M2SA; FGLIDVKCFASSECWTACKKVTGSGQGKCQNNQCRCY -------1-----2---3----------1----2-3- >Beta-galactoside-specific; SWP:P81446; PDB:1M2TB; AVTCTASEPIVRIVGRNGMTVDVRDDDFHDGNQIQLWPSKSNNDPNQLWTIKKDGTIRSN ------------------------------------------------------------ GSCLTTYGYTAGVYVMIFDCNTAVREATIWQIWGNGTIINPRSNLVLAASSGIKGTTLTV --1----------------1---------------------------------------- QTLDYTLGQGWLAGNDTAPRETTIYGFRDLCMESAGGSVYVETCTAGQENQRWALYGDGS ------------------------------2------------2---------------- IRPKQLQSQCLTNGRDSISTVINIVSCSAGSSGQRWVFTNEGAILNLKNGLAMDVAQANP ---------3----------------3--------------------------------- SLQRIIIYPATGNPNQMWLPVP ---------------------- >BETA-LACTAMASE TEM; SWP:P00810; PDB:1M40A; HPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVD ---------------------------------------------------1-------- AGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGP -------------------------------------1---------------------- KELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPAAMATTLRKLLTGELLTLASRQ ------------------------------------------------------------ QLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTG ------------------------------------------------------------ SQATMDERNRQIAEIGASLIKHW ----------------------- >INTERLEUKIN-2; SWP:P01585; PDB:1M48A; SSSTKKTQLQLEHLLLDLQMILNGINNYKNPKLTRMLTFKFYMPKKATELKHLQCLEEEL ------------------------------------------------------1----- KPLEEVLNLAQRPRDLISNINVIVLELKGSETTFMCEYADETATIVEFLNRWITFCQSII -----------------------------------1------------------------ STL --- >KILLER CELL IMMUNOGLOBULI; SWP:P43631; PDB:1M4KA; PSLLAHPGPLVKSEETVILQCWSDVRFEHFLLHREGKYKDTLHLIGEHHDGVSKANFSIG --------------------1--------------------------------------- PMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLS -----------1------------------------------------------------ CSSRSSYDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPATHGGTYRCFGSFRDSPYE 2------------------------------------------------2---------- WSNSSDPLLVSVT ------------- >CARBOXYPEPTIDASE A; SWP:P00730; PDB:1M4LA; ARSTNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRP ------------------------------------------------------------ AIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTH ------------------------------------------------------------ SQNRLWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIV -----------------1----------------------1------------------- DFVKDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLYGTSYKY ------------------------------------------------------------ GSIITTIYQASGGSIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTI ------------------------------------------------------------ MEHTVNN ------- >BACULOVIRAL IAP REPEAT-CO; SWP:O70201; PDB:1M4MA; PQIWQLYLKNYRIATFKNWPFLEDCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEG -----------------------------------------------------1------ WEPDDNPIEEHRKHSPGCAFLTVKKQMEELTVSEFLKLDRQRAKNKIAKETN -----------------1---------------------------------- >INTERLEUKIN-22; SWP:Q9GZX6; PDB:1M4RA; SHCRLDKSNFQQPYITNRTFMLAKEASLADNNTDVRLIGEKLFHGVSMSERCYLMKQVLN --1------------------------------------------------2-------- FTLEEVLFPQSDRFQPYMQEVVPFLARLSNRLSTCHIEGDDLHIQRNVQKLKDTVKKLGE ----------------------------------1------------------------- SGEIKAIGELDLLFMSLRNACI --------------------2- >BONE MORPHOGENETIC PROTEI; SWP:Q13253; PDB:1M4UA; MQHYLHIRPAPSDNLPLVDLIEHPDPIFDPKEKDLNETLLRSLLGGHYDPGFMATSPPED ------------------------------------------------------------ RPGGAEDLAELDQLLRQRPSGAMPSEIKGLEFSEGLAQGKKQRLSKKLRRKLQMWLWSQT ------------------------------------------------------------ FCPVLYAWNDLGSRFWPRYVKVGSCFSKRSCSVPEGMVCKPSKSVHLTVLRWRCQRRGGQ -1----------------------2-----3-------1--------------4------ RCGWIPIQYPIISECKCSC -4------------2-3-- >RC-RNASE2 RIBONUCLEASE; SWP:Q9DFY8; PDB:1M58A; MQNWETFQKKHLTDTRDVKCDAEMKKALFDCKQKNTFIYARPGRVQALCKNIIVSKNVLS -------------------1----------2-----------------3----------- TDEFYLSDCNRIKLPCHYKLKKSSNTICITCENKLPVHFVAVEECP --------1------2-----------4--3-------------4- >RECEPTOR PROTEIN-TYROSINE; SWP:P21860; PDB:1M6BA; AVCPRCEVVMGNLEIVLTGHNADLSFLQWVREVTGYVLVAMNEFSTLPLPNLRVVRGTQV --1--1------------------------------------------------------ YDGKFAIFVMLNYNTNSSHALRQLRLTQLTEILSGGVYIEKNDKLCHMDTIDWRDIVRDR ---------------------------------------------2-------------- DAEIVVKDNGRSCPPCHEVCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDE ------------2--3---4---3-------4-------5---6---5-------67--- CAGGCSGPQDTDCFACRHFNDSGACVPRCPQPLVYNKLTFQLEPNPHTKYQYGGVCVASC 8---7-------8--9--------9---a--------------------------a---b PHNFVVDQTSCVRACPPDKMEVDKNGLKMCEPCGGLCPKACEGTGSGSRFQTVDSSNIDG ----------b---c--------------c--d---d---e------------------- FVNCTKILGNLDFLITGLNGDPWHKIPALDPEKLNVFRTVREITGYLNIQSWPPHMHNFS ---e-------------------------------------------------------- VFSNLTTIGGRSLYNRGFSLLIMKNLNVTSLGFRSLKEISAGRIYISANRQLCYHHSLNW ----------------------------------------------------f------- TKVLRGPTEERLDIKHNRPRRDCVAEGKVCDPLCSSGGCWGPGPGQCLSCRNYSRGGVCV ----------------------f------g---h----g-------h--i--------i- THCNFLNGEPREFAHEAECFSCHPECQPMEGTATCNGSGSDTCAQCAHFRDGPHCVSSCP --j---------------j--k---l--------k-------l--m--------m----- HGVLGAKGP --------- >BETA-LACTAMASE OXA-1; SWP:P13661; PDB:1M6KA; STDISTVASPLFEGTEGCFLLYDASTNAEIAQFNKAKCATQMAPDSTFIALSLMAFDAEI -----------------1-------------------1---------------------- IDQKTIFKWDKTPKGMEIWNSNHTPKTWMQFSVVWVSQEITQKIGLNKIKNYLKDFDYGN ------------------------------------------------------------ QDFSGDERNNGLTEAWLESSLKISPEEQIQFLRKIINHNLPVKNSAIENTIENMYLQDLD ------------------------------------------------------------ NSTKLYGKTGAGFTANRTLQNGWFEGFIISKSGHKYVFVSALTGNLGSNLTSSIKAKKNA ------------------------------------------------------------ ITILNTLNL --------- >BETA-2-MICROGLOBULIN; SWP:P30481; PDB:1M6OA; GSHSMRYFYTAMSRPGRGEPRFITVGYVDDTLFVRFDSDATSPRKEPRAPWIEQEGPEYW ------------------------------------------------------------ DRETQISKTNTQTYRENLRTALRYYNQSEAGSHIIQRMYGCDVGPDGRLLRGYDQDAYDG ----------------------------------------1------------------- KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQDRAYLEGLCVESLRRYLENGKETLQ -------------------------------------------1---------------- RADPPKTHVTHHPISDHEVTLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRT ----------------------2------------------------------------- FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP ------------------2----------------- >CATION-DEPENDENT MANNOSE-; SWP:P11456; PDB:1M6PA; EKTCDLVGEKGKESEKELALLKRLTPLFQKSFESTMYSYVFRVCREAGQHSSGAGLVQIQ ---1---------------------------------------1---------------- KSNGKETVVGRFNETQIFQGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNF -------------------------------------2------------3--------- NPVSEERGKVQDCFYLFEMDSSLACS ------------2-----------3- >S-ADENOSYL-METHYLTRANSFER; SWP:Q9WZX6; PDB:1M6YA; RKYSQRHIPVVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLR -------------------------------------------1--1------------- IAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILDLGVSTYQLKGENRGFTFERE ------------------------------------------------------------ EPLDRDLESEVTAQKVLNELPEEELARIIFEYGEEKRFARRIARKIVENRPLNTTLDLVK ------------------------------------------------------------ AVREALPSYEIRRRKRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFH ------------------------------------------------------------ SLEDRIVKETFRNSKKLRILTEKPVRPSEEEIRENPRARSGRLRAAERI ------------------------------------------------- >CHIMERA OF HUMAN AND E. C; SWP:P10599; PDB:1M7TA; MVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVD -------------------------------1--1------------------------- DAQDVAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLV ----------------------------------------------- >SMALL INDUCIBLE CYTOKINE ; SWP:P78556; PDB:1M8AA; DCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVRLLS -12------------------------1---------------2---------------- K - >ANTIFREEZE PROTEIN ISOFOR; SWP:Q9GSA6; PDB:1M8NA; GTCVNTNSQITANSQCVKSTATNCYIDNSQLVDTSICTRSQYSDANVKKSVTTDCNIDKS --1------------1-------2------------2-----------------3----- QVYLTTCTGSQYNGIYIRSSTTTGTSISGPGCSISTCTITRGVATPAAACKISGCSLSAM ------3------------------------4----5------------5----4----- >PHOSPHOLIPASE A2; SWP:P14418; PDB:1M8RA; SLVQFETLIMKVAKKSGMQWYSNYGCYCGWGGQGRPQDATDRCCFVHDCCYGKVTGCDPK -------------------------1-2--------------32----45------6--- MDVYSFSEENGDIVCGGDDPCKKEICECDRAAAICFRDNLNTYNDKKYWAFGAKNCPQEE --------------7-----6----7-5------3--------------------1---- SEPC ---4 >PHOSPHOLIPASE A2; SWP:Q9DF33; PDB:1M8TA; HLVQFNGMIRCTIPGSIPWWDYSDYGCYCGSGGSGTPVDELDRCCQVHDNCYTQAQQLTE ----------1---------------2-3--------------43-----5--------- CSPYSKRYSYDCSEGTLTCKADNDECAAFVCDCDRVAAICFAGAPYNKENINIDTTTRC 6----------1------7------6----7-5------4------------------2 >TGF-BETA RECEPTOR TYPE II; SWP:P37173; PDB:1M9ZA; ALCKFCDVRFSTCDNQKSCMSNCSITSICEKPQEVCVAVWRKNDENITLETVCHDPKLPY --1--2------3-----3---2-----4------1----------------4------- HDFILEDAASPTCIMKEKKKPGETFFMCSCSSDECNDNIIFSEEY ------------5--------------5-6----6---------- >1,3-1,4-BETA-D-GLUCAN 4-G; SWP:P23904; PDB:1MACA; GSVFWEPLSYFNPSTWEKADGYSNGGVFNCTWRANNVNFTNDGKLKLGLTSSAYNKFDCA -----------------------------1----------------------------1- EYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTKVQFNY ------------------------------------------------------------ YTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMMN ------------------------------------------------------------ LWNGTGVDDWLGSYNGANPLYAEYDWVKYTSN -------------------------------- >Ig gamma-2B chain C regio; SWP:GCBM_MOUSE; PDB:1MAMH; EVKLVESGGGLVQPGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKADGYTT ---------------------1-------------------------------------- EYSASVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCTRDPYGPAAYWGQGTLVTVSAA -------------------------------------1---------------------- KTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGL -------------------------2---------------------------------- YTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLE --------------------2---------------- >HUWENTOXIN-IV; SWP:P83303; PDB:1MB6A; ECLEIFKACNPSNDQCCKSSKLVCSRKTRWCKYQI -1------2------31------2------3---- >ACUTOHAEMONLYSIN; SWP:O57385; PDB:1MC2A; SLFELGKMIWQETGKNPVKNYGLYGCNCGVGGRGEPLDATDRCCFVHKCCYKKLTDCDSK -------------------------1-2--------------32----45------6--- KDRYSYKWKNKAIVCGKNQPCMQEMCECDKAFAICLRENLDTYNKSFRYHLKPSCKKTSE --------------7-----6----7-5------3-------------------1----- QC -4 >Ig heavy chain V region M; SWP:P01789; PDB:1MCPH; EVKLVESGGGLVQPGGSLRLSCATSGFTFSDFYMEWVRQPPGKRLEWIAASRNKGNKYTT ---------------------1-------------------------------------- EYSASVKGRFIVSRDTSQSILYLQMNALRAEDTAIYYCARNYYGSTWYFDVWGAGTTVTV -------------------------------------1---------------------- SSESARNPTIYPLTLPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVNFPPALA ---------------------------2-------------------------------- SGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQELDVNC -----------------3-------2---------------3 >IGL@ protein; SWP:Q6PIK1; PDB:1MCWW; SALTQPASVSGSPGQSITVSCAGHTSDVADSNSISWFQQHPDKAPKLLIYAVTFRPSGIP ------------------------------------------------------------ LRFSGSKSGNTASLTISGLLPDDEADYFCMSYLSDASFVFGSGTKVTVLRQPKANPTVTL ------------------------------------------------------------ FPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVEAGVETTKPSKQSNNKYAASSY ----------------1------------------------------------------- LSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS ---------------1------------------- >INTERLEUKIN 1 FAMILY, MEM; SWP:Q9QYY1; PDB:1MD6A; VLSGALCFRMKDSALKVLYLHNNQLLAGGLHAEKVIKGEEISVVPNRALDASLSPVILGV ------1----------------------------------------------------- QGGSQCLSCGTEKGPILKLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFL ------------------------------------------------------------ CTSPEADQPVRLTQIPEDPAWDAPITDFYFQQCD --------------------------------1- >C1R COMPLEMENT SERINE PRO; SWP:P00736; PDB:1MD8A; DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTQGVYTCTAQGIWKNEQKGE -1-----------------------------2--------------1------------- KIPRCLPVCGKPVNPVEQRIIGGQKAKMGNFPWQVFTNIHGRGGGALLGDRWILTAAHTL ----2---3--------------------------------------------------- YPKEHASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTL ------------------------------------------------------------ GPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNR -------3------------------------------------------4--------- MDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTK ---------4----------5-----------------------------5--------- VLNYVDWIKKEMEE -------------- >AMICYANIN; SWP:NA; PDB:1MDAL; VDPRAKWQPQDNDIQACDYWRHCSIAGNICDCSAGSLTSCPPGTLVASGSVGSCYNPPDP ----------------1-----2------3-4-------5-------------2------ NKYITAYRDCCGYNVSGRCACLNTEGELPVYNKDANDIIWCFGGEDGMTYHCSISPVSGA ---------56-------4-1-------------------6----------3-------- >INOSINE-5'-MONOPHOSPHATE ; SWP:P50097; PDB:1ME8A; AKYYNEPCHTFNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQS ------------------------1----------------------------------- VSGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKNFKAHNELVDSQKRYLVGAGINTR ------------------------------------------------------------ DFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYL ------------------------------------------------------------ ADAGADFIKIGIGGGSIITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIV ------------------------------------------------------------ YDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWEGVDSY ------------------------------------------------------------ VPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQSKAKITLVSSVSIVEGGAHDVI ----------------------1--------------------------------- >CARICAIN; SWP:P10056; PDB:1MEG; LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRS ---------------------1---------------------------------2---- HGCKGGYPPYALEYVAKNGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGN --1-------------------------------2------------------------- LLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVEHAVTAVGYGKSGGKGYILIKNS --------------------------------3--------------------------- WGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTKN -----------------------3------------ >Igk-C protein; SWP:Q58EU4; PDB:1MEXL; DIVMTQSQKFMSTSLGNRVSVTCKASQNVGTNVAWFQQKPGQSPKTLIYSASYRYSGVPD ----------------------1------------------------------------- RFTGSGSGTDFTLTINNVQSEDLAEYFCQQYNSYPYTFGGGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTGGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE -------------2------------------- >INTEGRIN ALPHA M; SWP:P11215; PDB:1MF7A; CPQEDSDIAFLIDGSGSIIPHDFRRMKEFVSTVMEQLKKSKTLFSLMQYSEEFRIHFTFK 1----------------------------------------------------------- EFQNNPNPRSLVKPITQLLGRTHTATGIRKVVRELFNITNGARKNAFKILVVITDGEKFG ------------------------------------------------------------ DPLGYEDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIASKPPRDHVFQVNNFEALKT ------------------------------------------------------------ IQNQLREKIFCIGS ----------1--- >COPPER,ZINC SUPEROXIDE DI; SWP:P00441; PDB:1MFMA; ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSA --------------------------------------------------------1--- GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH ------------------------------------------------------------ EKADDLGKGGNEQSTKTGNAGSRLACGVIGIAQ -------------------------1------- >PROTEIN (HTLV-1 GP21 ECTO; SWP:P02928; PDB:1MG1A; GKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAH ------------------------------------------------------------ DRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPN ------------------------------------------------------------ PPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVD ------------------------------------------------------------ NAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGV ------------------------------------------------------------ TVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVAL ------------------------------------------------------------ KSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAA ------------------------------------------------------------ QTNAAAMSLASGKSLLHEVDKDISQLTQAIVKNHKNLLKIAQYAAQNRRGLDLLFWEQGG ------------------------------------------------------------ LCKALQEQCCFLNITNSHVSILQERPPLEN -1------1--------------------- >GUANYL-SPECIFIC RIBONUCLE; SWP:P30289; PDB:1MGRA; VKAVGRVCYSALPSQAHDTLDLIDEGGPFPYSQDGVVFQNREGLLPAHSTGYYHEYTVIT -------1---------------------------------------------------- PGSPTRGARRIITGQQWQEDYYTADHYASFRRVDFAC ------------------------------------1 >HUMAN MELANOMA GROWTH STI; SWP:P09341; PDB:1MGSA; ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK --------1-2-----------------------1---------------2--------- KIIEKMLNSDKSN ------------- >PHOSPHOLIPASE A2; SWP:P60043; PDB:1MH2A; NTYQFQNMIQCTVPKRSWRDFADYGCYCGRGGSGTPIDDLDSCCQVHDNCYNSAREQGGC ----------1--------------2-3--------------43-----5---------6 RPKQKTYTYQCKAGGLSCSGANNSCAATTCDCDRLAAICFAGAPYNDNNYNIDLKARCQ ----------1------7------6----7-5------4------------------2- >Phospholipase A2 isoform ; SWP:P60044; PDB:1MH2B; NTWQFKNMISCTVPSRSWWDFADYGCYCGRGGSGTPSDDLDRCCQTHDNCYNEAEKISGC ----------1--------------2-3--------------43-----5---------6 NPRFRTYSYACTAGTLTCTGRNNACAASVCDCDRNAAICFAGAPYNDSNYNIDLQARCN ----------1------7------6----7-5------4------------------2- >PHOSPHOLIPASE A2; SWP:P60043; PDB:1MH8A; NIYQFKNMIECTVPARSWWDFADYGCYCGGGGSGTPTDDLDRCCQVHDNCYNQAQEITGC ----------1--------------2-3--------------43-----5---------6 RPKWKTYTYQCTQGTLTCKGRNNACAATTCDCDRLAAICFAGAPYNDTNYNIDLKARCQ ----------1------7------6----7-5------4------------------2- >MHC CLASS I ANTIGEN H2-M3; SWP:Q31093; PDB:1MHCA; GSHSLRYFHTAVSRPGRGEPQYISVGYVDDVQFQRCDSIEEIPRMEPRAPWMEKERPEYW ------------------------------------------------------------ KELKLKVKNIAQSARANLRTLLRYYNQSEGGSHILQWMVSCEVGPDMRLLGAHYQAAYDG ----------------------------------------1------------------- SDYITLNEDLSSWTAVDMVSQITKSRLESAGTAEYFRAYVEGECLELLHRFLRNGKEILQ -------------------------------------------1---------------- RADPPKAHVAHHPRPKGDVTLRCWALGFYPADITLTWQKDEEDLTQDMELVETRPSGDGT ----------------------2------------------------------------- FQKWAAVVVPSGEEQRYTCYVHHEGLTEPLALKWRS ------------------2----------------- >IGHG1 protein; SWP:Q569F4; PDB:1MHPH; EVQLVESGGGLVQPGGSLRLSCAASGFTFSRYTMSWVRQAPGKGLEWVATISGGGHTYYL ---------------------1-------------------------------------- DSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCTRGFGDGGYFDVWGQGTLVTVSSAS ----------------------------------1------------------------- TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGL ------------------------2----------------------------------- YSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK --------------------2------------------ >ADP-RIBOSYLATION FACTOR B; SWP:Q9UJY4; PDB:1MHQA; SLELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALT -------------------------1---------------------------------- VLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPE ----1------------------------------------------------------- DIKIRDAYQMLKKQGIIKQDPKL ----------------------- >MACROPHAGE INFLAMMATORY P; SWP:P10889; PDB:1MI2A; AVVASELRCQCLKTLPRVDFKNIQSLSVTPPGPHCAQTEVIATLKGGQKVCLDPEAPLVQ --------1-2-----------------------1---------------2--------- KIIQKILNKGKAN ------------- >NONSPECIFIC LIPID-TRANSFE; SWP:P07597; PDB:1MIDA; LNCGQVDSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHN --1---------2-------------23-------------------4-1---------- LNLNNAASIPSKCNVNVPYTISPDIDCSRIY ------------3-------------4---- >CHIMERIC SDZ CHI621; SWP:NA; PDB:1MIMH; QLQQSGTVLARPGASVKMSCKASGYSFTRYWMHWIKQRPGQGLEWIGAIYPGNSDTSYNQ -------------------1---------------------------------------- KFEGKAKLTAVTSASTAYMELSSLTHEDSAVYYCSRDYGYYFDFWGQGTTLTVSSASTKG ---------------------------------1-------------------------- PSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL ---------------------2-------------------------------------- SSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP -----------------2----------------- >CHIMERIC SDZ CHI621; SWP:NA; PDB:1MIML; QIVSTQSPAIMSASPGEKVTMTCSASSSRSYMQWYQQKPGTSPKRWIYDTSKLASGVPAR ----------------------1------------------------------------- FSGSGSGTSYSLTISSMEAEDAATYYCHQRSSYTFGGGTKLEIKRTVAAPSVFIFPPSDE --------------------------1--------------------------------- QLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSK ----------2------------------------------------------------- ADYEKHKVYACEVTHQGLSSPVTKSFNRGE ----------2------------------- >INTEGRIN ALPHA-L; SWP:P20701; PDB:1MJNA; GNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKCSNTSYQFAAVQFSTSYKTEFDFSDYV ---------------------------------1-------------------------- KRKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGN ------------------------------------------------------------ IDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLCTELQKKI ---------------------------------------------------1------- >VASCULAR ENDOTHELIAL GROW; SWP:P15692; PDB:1MJVA; MVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSAVPLMRCGGACNDEGLECVPTE -------------1------------------------------2---3------1---- ESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKK -----------------------------2-3---- >MIDKINE; SWP:P21741; PDB:1MKCA; CKYKFENWGACDGGTGTKVRQGTLKKARYNAQCQETIRVTKPC 1---------2---------------------1---------2 >M3; SWP:O41925; PDB:1MKFA; HSSGVSTQSVDLSQIKRGDEIQAHCLTPAETEVTECAGILKDVLSKNLHELQGLCNVKNK ------------------------1----------1------------------2----- MGVPWVSVEELGQEIITGRLPFPSVGGTPVNDLVRVLVVAESNTPEETPEEEFYAYVELQ ------------------------------------------------------------ TELYTFGLSDDNVVFTSDYMTVWMIDIPKSYVDVGMLTRATFLEQWPGAKVTVMIPYSST ------------------------------------------------------------ FTWCGELGAISEESAPQPSLSARSPVCKNSARYSTSKFCEVDGCTAETGMEKMSLLTPFG ---2----------------------3----------------4---------------- GPPQQAKMNTCPCYYKYSVSPLPAMDHLILADLAGLDSLTSPVYVMAAYFDSTHENPVRP ----------4-3----------------------------------------------- SSKLYHCALQMTSHDGVWTSTSSEQCPIRLVEGQSQNVLQVRVAPTSMPNLVGVSLMLEG ------5------------------5---------------------------------- QQYRLEYFGDH ----------- >VASCULAR ENDOTHELIAL GROW; SWP:P15692; PDB:1MKGA; VVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRAGGCCNDEGLECVPTEE ------------1----------------------------------2------1----- SNITMQIMRIKPHQGQHIGEMSFLQHNKAECRPK ------------------------------2--- >VASCULAR ENDOTHELIAL GROW; SWP:P15692; PDB:1MKKA; VVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCANDEGLECVPTEE ------------1------------------------------2----------1----- SNITMQIMRIKPHQGQHIGEMSFLQHNKCEARP ----------------------------2---- >MIDKINE; SWP:P21741; PDB:1MKNA; KKKDKVKKGGPGSECAEWAWGPCTPSSKDCGVGFREGTCGAQTQRIRCRVPCNWKKEFG --------------1-------2------3--------1--------2---3------- >HYPOTHETICAL PROTEIN (CRP; SWP:P0ADX1; PDB:1ML8A; MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGR ----------------------------------------------1------------- QDVVDCEVKLTSERRERLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAV -------------------------------------------------1---------- NITHSYEVVAA ----------- >IGG1-KAPPA D44.1 FAB (HEA; SWP:NA; PDB:1MLBB; QVQLQESGAEVMKPGASVKISCKATGYTFSTYWIEWVKQRPGHGLEWIGEILPGSGSTYY ---------------------1-------------------------------------- NEKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCARGDGNYGYWGQGTTLTVSSASTT -----------------------------------1------------------------ PPSVFPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL ----------------------2------------------------------------- SSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRDC -----------------2-------------------- >TERMICIN; SWP:P82321; PDB:1MM0A; ACNFQSCWATCQAQHSIYFRRAFCDRSQCKCVFVRG -1----2---3------------1----2-3----- >ANTIMICROBIAL PEPTIDE 2; SWP:P27275; PDB:1MMC; VGECVRGRCPSGMCCSQFGYCGKGPKYCGR ---1----2----31-----2------3-- >IGG2A-KAPPA ANTIBODY MN12; SWP:NA; PDB:1MNUH; EVNLQQSGTVLARPGASVRMSCKASGYSFTSYWLHWIKQRPGQGLEWIGGIYPGNRDTRY ---------------------1-------------------------------------- TQRFKDKAKLTAVTSANTAYMELSSLTNEDSAVYYCSIIYFDYADFIMDYWGQGTTVTVS -----------------------------------1------------------------ SAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQS ---------------------------2-------------------------------- DLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRG ----------------------2------------------- >ORF3; SWP:Q56839; PDB:1MO9A; KVWNARNDHLTINQWATRIDEILEAPDGGEVIYNVDENDPREYDAIFIGGGAAGRFGSAY ------------------------------------------------------------ LRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVG --------------------1----1---------------------------------- IKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAAGKVFKAKNLILA ------------------------------------------------------------ VGAGPGTLDVPGVNAKGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTV ------------------------------------------------------------ MLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEM ------------------------------------------------------------ RIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTSVPNVYAVGDLIGGPMEM ------------------------------------------------------------ FKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGHEIVTIKMPP ------------------------------------------------------------ DTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYL ------------------------------------------------------------ NVLIKQGLTVDELGDMDELFLNPTHFIQLSRLRAGSKNLVSL ------------------------------------------ >MOLONEY MURINE LEUKEMIA V; SWP:P03385; PDB:1MOF; DLREVEKSISNLEKSLTSLSEVVLQNRRGLDLLFLKEGGLCAALKEECAFYAD ----------------------------------------1------1----- >Transforming growth facto; SWP:P01135; PDB:1MOXC; VSHFNDCPDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCEHADLLA ------1-------2----1----------2-3--------3------- >FOCAL ADHESION KINASE 1; SWP:Q05397; PDB:1MP8A; DYEIQRERIELGRCIGEGQFGDVHQGIYMSPPALAVAIKTCKNCTSDSVREKFLQEALTM ----------------------------------------1--1---------------- RQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA ------------------------------------------------------------ YLESKRFVHRDIAARNVLVSSNDCVKLGDLPIKWMAPESINFRRFTSASDVWMFGVCMWE ------------------------------------------------------------ ILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA ------------------------------------------------------------ QLSTILEEEKAQ ------------ >NKG2-D TYPE II INTEGRAL M; SWP:P26718; PDB:1MPUA; QIPLTESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLK --------1--2-----1----2----------------3-------------------- LVKSYHWMGLVHIPTNGSWQWEDGSILSPNLLTIIEMQKGDCALYASSFKGYIENCSTPN -----------------------------------------4-------------4---- TYICMQRT ---3---- >ALPHA-AMINO ACID ESTER HY; SWP:Q8PK36; PDB:1MPXA; TSPTPDITGKPFVAADASNDYIKREVIPRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASG ------------------------------------------------------------ RTERLASPHKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVTRPLRGPLNPSEVDHAT ------------------------------------------------------------ DAWDTIDWLVKNVSESNGKVGIGSSYEGFTVVALTNPHPALKVAVPESPIDGWGDDWFNY ------------------------------------------------------------ GAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLT ------------------------------------------------------------ EHAAYDAFWQEQALDKVARTPLKVPTWLQGLWDQEDWGAIHSYAAEPRDKRNTLNYLVGP ------------------------------------------------------------ WRHSQVNYDGSALGALNFEGDTARQFRHDVLRPFFDQYLVDGAPKADTPPVFIYNTGENH ------------------------------------------------------------ WDRLKAWPRSCDKGCAATSKPLYLQAGGKLSFQPPVAGQAGFEEYVSDPAKPVPFVPRPV ----------1---1--------------------------------------------- DFADRAWTTWLVHDQRFVDGRPDVLTFVTEPLTEPLQIAGAPDVHLQASTSGSDSDWVVK ------------------------------------------------------------ LIDVYPEEASNPKGGYELPVSLAIFRGRYRESFSTPKPLTSNQPLAFQFGLPTANHTFQP ------------------------------------------------------------ GHRVVQVQSSLFPLYDRNPQTYVPNIFFAKPGDYQKATQRVYVSPEQPSYISLPVR -------------------------------------------------------- >GLUTAMATE RECEPTOR 2; SWP:P19491; PDB:1MQIA; NKTVVVTTILESPYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYG ------------------------------------------------------------ ARDADTKIWNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKGTPIE ------------------------------------------------------------ SAEDLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVR ------------------------------------------------------------ KSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLAVLKLN -----------------------1------------------------------------ EQGLLDKLKNKWWYDKGECG ------------------1- >Ig heavy chain V region 5; SWP:P18525; PDB:1MQKH; EVKLQESGGDLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVASINNGGGRTYY ---------------------1-------------------------------------- PDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCVRHEYYYAMDYWGQGTTVTVSSAW -----------------------------------1------------------------ RHP --- >Ig heavy chain V region 5; SWP:P18525; PDB:1MQKL; DIELTQTPVSLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPS ----------------------1------------------------------------- RFSGSGSGTQFSLKINSLLPEDFGSYYCQHHYGTPPLTFGGGTKLEIKR ---------------------------1--------------------- >HEMAGGLUTININ HA1 CHAIN; SWP:P03442; PDB:1MQMA; STATLCLGHHAVPNGTIVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGRACTLID -------------------------------------------1-----------2---- ALLGDPHCDVFQNETWDLFVERSNAFSNCYPYDIPDYASLRSLVASSGTLEFITEGFTWT -------2--------------------3------------------------------- GVTQNGGSSACKRGPANGFFSRLNWLTKSESAYPVLNVTMPNNDNFDKLYIWGVHHPSTN ----------3------------------------------------------------- QEQTNLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGQPGRISIYWTIVKPGDVLVINSN ------------------------------------------------------------ GNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKY ----------------------------1---4-----------------------4--- VKQNTLKLATGMRNVPEK ------------------ >NICOTIANA ALATA PLANT DEF; SWP:P32026; PDB:1MR4A; RECKTESNTFPGICITKPPCRKACISEKFTDGHCSKILRRCLCTKPC --1----------2-----3---4---------2------3-4---1 >NEUROTOXIN; SWP:Q9YGJ0; PDB:1MR6A; MQCKTCSFYTCPNSETCPDGKNICVKRSWTAVRGDGPKREIRRECAATCPPSKLGLTVFC --1--2----2-----3------1--------------------3---4----------4 CTTDNCNH 5----5-- >TRANS-SIALIDASE; SWP:Q26966; PDB:1MS9A; APGSSRVELFKRQSSKVPFEKDGKVTERVVHSFRLPALVNVDGVMVAIADARYETSFDNS ------------------------------------------------------------ LIDTVAKYSVDDGETWETQIAIKNSRASSVSRVVDPTVIVKGNKLYVLVGSYNSSRSYWT ------------------------------------------------------------ SHGDARDWDILLAVGEVTKSTAGGKITASIKWGSPVSLKEFFPAEMEGMHTNQFLGGAGV ------------------------------------------------------------ AIVASNGNLVYPVQVTNKKKQVFSKIFYSEDEGKTWKFGKGRSAFGCSEPVALEWEGKLI ------------------------------------------------------------ INTRVDYRRRLVYESSDMGNTWLEAVGTLSRVWGPSPKSNQPGSQSSFTAVTIEGMRVML ------------------------------------------------------------ FTHPLNFKGRWLRDRLNLWLTDNQRIYNVGQVSIGDENSAYSSVLYKDDKLYCLHEINSN ------------------------------------------------------------ EVYSLVFARLVGELRIIKSVLQSWKNWDSHLSSICTPAGCGPAVTTVGLVGFLSHSATKT ----------------------------------1----1-------------------- EWEDAYRCVNASTANAERVPNGLKFAGVGGGALWPVSQQGQNQRYHFANHAFTLVASVTI ------------------------------------------------------------ HEVPKGASPLLGASLDSSGGKKLLGLSYDKRHQWQPIYGSTPVTPTGSWEMGKRYHVVLT ------------------------------------------------------------ MANKIGSVYIDGEPLEGSGQTVVPDERTPDISHFYVGGYKRSGMPTDSRVTVNNVLLYNR ------------------------------------------------------------ QLNAEEIRTLFLSQDLIGTEAH ---------------------- >MARGATOXIN; SWP:P40755; PDB:1MTX; TIINVKCTSPKQCLPPCKAQFGQSAGAKCMNGKCKCYPH ------1-----2---3-----------1----2-3--- >PROLINE IMINOPEPTIDASE; SWP:P96084; PDB:1MTZA; ECIENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQ -1----------------1----------------------------------------- FGCGRSEEPDQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLK ------------------------------------------------------------ GLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLL ------------------------------------------------------------ RSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEY ------------------------------------------------------------ DEVTPNVARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSDFILKHL -------------------------------------------------- >IMMUNOGLOBULIN HEAVY CHAI; SWP:P0AE72; PDB:1MVFA; QVQLVESGGGSVQAGGSLRLSCAASGFTYSRKYMGWFRQAPGKEREGVAAIFIDNGNTIY ---------------------1-------------------------------------- ADSVQGRFTISQDNAKNTVYLQMNSLKPEDTAMYYCAASSRWMDYSALTAKAYNSWGQGT -----------------------------------1------------------------ QVTVSSR ------- >BOWMAN-BIRK TYPE PROTEASE; SWP:P80321; PDB:1MVZA; TKSTTTACCDFCPCTRSIPPQCQCTDVREKCHSACKSCLCTRSFPPQCRCYDITDFCYPS -------12--3-4-------4-2------5---6--5-7-------7-6------3--- CS 1- >AMYLOID A4 PROTEIN; SWP:P05067; PDB:1MWPA; LLAEPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVE ----------1-----------------------1----------2-------------- ANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFV ----------3------3-----------2------ >ALPHA AMYLASE; SWP:O08452; PDB:1MXGA; AKYLELEEGGVIMQAFYWDVPGGGIWWDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSM ------------------------------------------------------------ GYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADVVINHRAGGDLEWN ------------------------------------------------------------ PFVGDYTWTDFSKVASGKYTANYLDFHPNELHCCDEGTFGGFPDICHHKEWDQYWLWKSN ------------------------------------------------------------ ESYAAYLRSIGFDGWRFDYVKGYGAWVVRDWLNWWGGWAVGEYWDTNVDALLSWAYESGA ------------------------------------------------------------ KVFDFPLYYKMDEAFDNNNIPALVYALQNGQTVVSRDPFKAVTFVANHDTDIIWNKYPAY ------------------------------------------------------------ AFILTYEGQPVIFYRDFEEWLNKDKLINLIWIHDHLAGGSTTIVYYDNDELIFVRNGDSR ------------------------------------------------------------ RPGLITYINLSPNWVGRWVYVPKFAGACIHEYTGNLGGWVDKRVDSSGWVYLEAPPHDPA ---------------------------1-------------------------------- NGYYGYSVWSYCGVG -----------1--- >DROSOMYCIN; SWP:P41964; PDB:1MYN; DCLSGRYKGPCAVWDNETCRRVCKEEGRSSGHCSPSLKCWCEGC -1--------2-------3---4---------2-----3-4--1 >MYROSINASE; SWP:P29736; PDB:1MYR; EITCQENNPFTCGNTDGLNSSSFEADFIFGVASSAYQIEGTIGRGLNIWDGFTHRYPDKS ---1-------2------------------------------------------------ GPDHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNQKGIDYYH ------------------------------------------------------------ GLIDGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYW ------------------------------------------------------------ LTINQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYR -----------------------3-------3---------------------------- KNYTHQGGKIGPTMITRWFLPYNDTDRHSIAATERMKQFFLGWFMGPLTNGTYPQIMIDT ------------------------------------------------------------ VGARLPTFSPEETNLVKGSYDFLGLNYYFTQYAQPSPNPVNATNHTAMMDAGAKLTYINA ------------------------------------------------------------ SGHYIGPLFESDGGDGSSNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGSENRKE ------------------------------------------------------------ SMLDYTRIDYLCSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNNGFTVRFGLSYINWNN -----------2---1-------------------------------------------- VTDRDLKKSGQWYQKFISP ------------------- >PRO-GRANZYME K; SWP:P49863; PDB:1MZAA; MEIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTK ---------------------------1---------------1------ >Fimbrial protein papE [Pr; SWP:P08407; PDB:1N0LB; VPACTVSNTTVDWQDVENGNHEKEFTVNRCPYNLGTKVTITATNTYNNAILVQSSDGLLV ---1-------------------------1------------------------------ YLYNSNAGNIGTAITLGTPFTPGKITGNNADKTISLHAKLGYKPFSATATLVASYS -------------------------------------------------------- >BILIN-BINDING PROTEIN; SWP:P09464; PDB:1N0SA; DVYHDGACPEVKPVDNFDWSQYHGKWWEVAKYPSPNGKYGKCGWAEYTPEGKSVKVSRYD -------1---------------------------------2------------------ VIHGKEYFMEGTAYPVGDSKIGKIYHSRTVGGYTRKTVFNVLSTDNKNYIIGYSCRYDED ------------------------------------------------------1----- KKGHWDHVWVLSRSMVLTGEAKTAVENYLIGSPVVDSQKLVYSDFSEAACKVN -------------------------------------------------2--- >POLLEN ALLERGEN PHL P 1; SWP:P43213; PDB:1N10A; PKVPPGPNITATYGDKWLDAKSTWYGGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGS -----------------------------1---------------------------1-- CFEIKCTKPEACSGEPVVVHITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELE 2----3-----3------------------------------------------------ LQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKE -------2---------------------------------------------------- SWGAIWRIDTPDKLTGPFTVRYTTEGGTKTEAEDVIPEGWKADTSYES ------------------------------------------------ >MATURE FIMBRIAL PROTEIN P; SWP:P08407; PDB:1N12A; VPACTVSNTTVDWQDVEIQTLSQNGNHEKEFTVNRCPYNLGTKVTITATNTYNNAILVQN ---1-------------------------------1------------------------ TSNTSSDGLLVYLYNSNAGNIGTAITLGTPFTPGKITGNNADKTISLHAKLGYKGNQNLI ------------------------------------------------------------ AGPFSATATLVASYS --------------- >MEROZOITE SURFACE PROTEIN; SWP:Q9GSQ9; PDB:1N1IA; SSAHKCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPASITCEENNGGCAPEAEC -----1----------1-----------2----------2------3------4-----3 TMDDKKEVECKCTKEGSEPLFEGVFCSSSSG ---------4-5-------------5----- >SIALIDASE; SWP:O44049; PDB:1N1TA; AASLAPGSSRVELFKRKNSTVPFEESNGTIRERVVHSFRIPTIVNVDGVMVAIADARYET ------------------------------------------------------------ SFDNSFIETAVKYSVDDGATWNTQIAIKNSRASSVSRVMDATVIVKGNKLYILVGSFNKT ------------------------------------------------------------ RNSWTQHRDGSDWEPLLVVGEVTKSAANGKTTATISWGKPVSLKPLFPAEFDGILTKEFV ------------------------------------------------------------ GGVGAAIVASNGNLVYPVQIADMGGRVFTKIMYSEDDGNTWKFAEGRSKFGCSEPAVLEW ------------------------------------------------------------ EGKLIINNRVDGNRRLVYESSDMGKTWVEALGTLSHVWTNSPTSNQQDCQSSFVAVTIEG ------------------------------------------------------------ KRVMLFTHPLNLKGRWMRDRLHLWMTDNQRIFDVGQISIGDENSGYSSVLYKDDKLYSLH ------------------------------------------------------------ EINTNDVYSLVFVRLIGELQLMKSVVRTWKEEDNHLASICTPVVPAGCGAAVPTAGLVGF ---------------------------------------1-------1------------ LSHSANGSVWEDVYRCVDANVANAERVPNGLKFNGVGGGAVWPVARQGQTRRYQFANYRF ------------------------------------------------------------ TLVATVTIDELPKGTSPLLGAGLEGPGDAKLLGLSYDKNRQWRPLYGAAPASPTGSWELH ------------------------------------------------------------ KKYHVVLTMADRQGSVYVDGQPLAGSGNTVVRGATLPDISHFYIGGPRSKGAPTDSRVTV ------------------------------------------------------------ TNVVLYNRRLNSSEIRTLFLSQDMIGTD ---------------------------- >RIBONUCLEASE, SEMINAL; SWP:P00669; PDB:1N1XA; KESAAAKFERQHMDSGSSNYCNLMMRKMTQGKCKPVNTFVHESLADVKAVCSQKKVTCKN --------------------1-----------2-----------------3------4-- GQTNCYQSKSTMRITDCRETGSSKYPNCAYKTTQVEKHIIVACGGKPSVPVHFDASV ----4-----------1----------2--------------3-------------- >IL-6 RECEPTOR ALPHA CHAIN; SWP:P08887; PDB:1N26A; LAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGR -----1---------------------2-------------------------------- RLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLSCFRKSPLSNVVCEWGPRST ----------------2------------------------3----------3------- PSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVG -------------------------4----------4----------------1------ SKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRA ------------------------------------------------------------ ERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTPWTES ----------------------------------------------------------- >PHOSPHOLIPASE A2, MEMBRAN; SWP:P14555; PDB:1N28A; ALVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTQDCCYKRLEKRGCG -------------------------1-2--------------32----45--------6- TKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGS ----------------7-----6----7-5------3-------------------1--- TPRC ---4 >VITAMIN B12 TRANSPORT PRO; SWP:P37028; PDB:1N2ZA; AAPRVITLSPANTELAFAAGITPVGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDL ------------------------------------------------------------ VIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLD ------------------------------------------------------------ QYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSR -----------------------------------------1------------------ EQVLARSPQAIVITGGPDQIPKIKQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNA ---------------------------------------------------------1-- LSQVD ----- >FLORAL DEFENSIN-LIKE PROT; SWP:Q8H6Q1; PDB:1N4NA; ATCKAECPTWDSVCINKKPCVACCKKAKFSDGHCSKILRRCLCTKEC --1---2------3-----4--25---------3------4-5---1 >IMMUNOGLOBULIN KAPPA CHAI; SWP:NA; PDB:1N4XH; EVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTF ---------------------1-------------------------------------- ADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRHDYGEIFTYWGQGTTVTVSA -----------------------------------1------------------------ >IMMUNOGLOBULIN KAPPA CHAI; SWP:NA; PDB:1N4XL; MDILMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNR -----------------------1------------------------------------ FSGVPDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIA ---------------------------------1------------------- >SERUM ALBUMIN; SWP:P02768; PDB:1N5UA; AHKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAEN ---------------------------------------------------1-------- CDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVD 1------------2--------------32---------3-------------------- VMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPK --4-------------------------------------------54-------5---- LDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKV ------------------6----------------------------------------- HTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPAD ---76------7-----------8------------98---------9------------ LPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCC --------------a-------------------------------------------ba AAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTP -------b----------------------c----------------------------- TLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESL ---------------dc---------d------------e--------------fe---- VNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATK -----f--------------------------g--------------------------- EQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAALG ----------------hg-------h----------------- >SAPOSIN B; SWP:Q92740; PDB:1N69A; GDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQ ---1--2----------------------------3----------3------------- MMMHMQPKEICALVGFCD ----------2-----1- >INTERFERON-ALPHA/BETA REC; SWP:P48551; PDB:1N6UA; SYDSPDYTDESCTFKISLRNFRSILSWELKNHSIVPTHYTLLYTIMSKPEDLKVVKNCAN -----------1---------------------------------------------2-- TTRSFCDLTDEWRSTHEAYVTVLEGFSGNTTLFSCSHNFWLAIDMSFEPPEFEIVGFTNH -----2----------------------------1------------------------- INVMVKFPSIVEEELQFDLSLVIEEQSEGIVKKHKPEIKGNMSGNFTYIIDKLIPNTNYC -----------------------------------------------------------3 VSVYLEHSDEQAVIKSPLKCTLLPPGQESEFS -------------------3------------ >BASEPLATE STRUCTURAL PROT; SWP:P19062; PDB:1N7ZA; IYRAIVTSKFRTEKLNFYNSIGSGPDKNTIFITFGRSEPWSSNENEVGFAPPYPTDSVLG ------------------------------------------------------------ VTDWTHGTVKVLPSLDAVIPRRDWGDTRYPDPYTFRINDIVVCNSAPYNATESGAGWLVY ------------------------------------------------------------ RCLDVPDTGCSIASLTDKDECLKLGGKWTPSARSTPPEGRGDAEGTIEPGDGYVWEYLFE ---------1----------1--------------------------------------- IPPDVSINRCTNEYIVVPWPEELKEDPTRWGYEDNLTWQQDDFGLIYRVKANTIRFKAYL ------------------------------------------------------------ DSVYFPEAALPGNKGFRQISIITNPLEAKAHPNDPNVKAEKDYYDPEDLRHSGEIYENRP ------------------------------------------------------------ PIIADQTEEINILFTF ---------------- >POTASSIUM CHANNEL BLOCKIN; SWP:P58498; PDB:1N8MA; IEAIRCGGSRDCYRPCQKRTGCPNAKCINKTCKCYGCS -----1-----2---3-----4----1----2-3--4- >CHEMOSENSORY PROTEIN; SWP:Q9U3Y0; PDB:1N8VA; KYTDKYDNINLDEILANKRLLVAYVNCVMERGKCSPEGKELKEHLQDAIENGCKKCTENQ --------------------------1------1------------------2--2---- EKGAYRVIEHLIKNEIEIWRELTAKYDPTGNWRKKYEDRAK ----------------------------------------- >Receptor tyrosine-protein; SWP:P06494; PDB:1N8YC; TQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYVPANASLSFLQDIQEVQG ---1--------------------------1----------------------------- YMLIAHNQVKRVPLQRLRIVRGTQLFEDKYALAVLDNRDPQPEGLRELQLRSLTEILKGG ------------------------------------------------------------ VLIRGNPQLCYQDMVLWKDVFRKNNQLAPVDIDTNRSRACPPCAPACKDNHCWGESPEDC ---------2-----------------------------2--3---4----3-------4 QILTGTICTSGCARCKGRLPTDCCHEQCAAGCTGPKHSDCLACLHFNHSGICELHCPALV -------5---6--5-------67---8---7-------8--9--------9---a---- TYESMHNPEGRYTFGASCVTTCPYNYLSTEVGSCTLVCPPNNQEVTAEDGTQRCEKCSKP -----------------a---b-----------b---c---------------c--d--- CARVCYGLGMEHLRGARAITSDNVQEFDGCKKIFGSLAFLPESFDGDPSSGIAPLRPEQL d---e------------------------e------------------------------ QVFETLEEITGYLYISAWPDSLRDLSVFQNLRIIRGRILHDGAYSLTLQGLGIHSLGLRS ------------------------------------------------------------ LRELGSGLALIHRNAHLCFVHTVPWDQLFRNPHQALLHSGNRPEEDCGLEGLVCNSLCAH -----------------f----------------------------f------g---h-- GHCWGPGPTQCVNCSHFLRGQECVEECRVWKGLPREYVSDKRCLPCHPECQPQNSSETCF --g-------h--i--------i---j---------------j--k---l--------k- GSEADQCAACAHYKDSSSCVARCPSGVKPDLSYMPIWKYPDEEGICQPCPIN ------l--m--------m---n----------------------n------ >BETA-LACTAMASE SHV-2; SWP:P30896; PDB:1N9BA; SPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVD ---------------------------------------------------1-------- AGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGP -------------------------------------1---------------------- AGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQR ------------------------------------------------------------ QLLQWMVDDRVAGPLIRSVLPAGWFIADKTGASERGARGIVALLGPNNKAERIVVIYLRD ------------------------------------------------------------ TPASMAERNQQIAGIGAALIEHWQR ------------------------- >PROLACTIN; SWP:P01236; PDB:1N9DA; LPICPGGAARCQVTLRDLFDRAVVLSHYIHNLSSEMFSEFDKRYTHGRGFITKAINSCHT ---1------1----------------------------------------------2-- SSLATPEDKEQAQQMNQKDFLSLIVSILRSWNEPLYHLVTEVRGMQEAPEAILSKAVEIE ------------------------------------------------------------ EQTKRLLEGMELIVSQVHPETKENEIYPVWSGLPSLQMADEESRLSAYYNLLHCLRRDSH -----------------------------------------------------2------ KIDNYLKLLKCRIIHNNNC ----------3-------3 >HELLETHIONIN D; SWP:P60057; PDB:1NBLA; KSCCRNTLARNCYNACRFTGGSQPTCGILCDCIHVTTTTCPSSHPS --12-------3---4---------4---3-2-------1------ >JUNCTIONAL ADHESION MOLEC; SWP:Q9Y624; PDB:1NBQA; AMGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYE -------------------------1---------------------------------- DRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSAT ------------------------1----------------------------------- IGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSA --------2--------------------------------------------------- SDTGEYSCEARNGYGTPMTSNAVRMEAVE -------2--------------------- >IGG2B-KAPPA BV04-01 FAB (; SWP:NA; PDB:1NBVH; EVQPVETGGGLVQPKGSLKLSCAASGFSFNTNAMNWVRQAPGKGLEWVARIRSKSNNYAT ---------------------1-------------------------------------- YYADSVKDRFTISRDDSQNMLYLQMNNLKTEDTAMYYCVRDQTGTAWFAYWGQGTLVTVS -------------------------------------1---------------------- AAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQS ---------------------------2-------------------------------- GLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLE ----------------------2---------------- >Putative uncharacterized ; SWP:Q48423; PDB:1NBWB; PPGVRLFYDPRGHHAGAINELCWGLEEQGVPCQTITYDGGGDAAALGALAARSSPLRVGI ---------------------1---------1---------------------------- GLSASGEIALTHAQLPADAPLATGHVTDSDDQLRTLGANAGQLVKVLPLSERN ----------------------------------------------------- >MONOCLONAL ANTIBODY 2D12.; SWP:NA; PDB:1NC2B; VKLQESGPGLVQPSQSLSITCTVSGFSLTDYGVHWVRQSPGKGLEWLGVIWSGGGTAYTA --------------------1--------------------------------------- AFISRLNIYKDNSKNQVFFEMNSLQANDTAMYYCARRGSYPYNYFDVWGQGTTVTVSSAK ---------------------------------1-------------------------- TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLY ------------------------2----------------------------------- TLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR -------------------2------------------ >T LYMPHOCYTE ACTIVATION A; SWP:P42081; PDB:1NCNA; MLKIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMG ---------------1-------------------------------------------- RTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPTGMIRIHQMNSELSVLA -------------------------1------------------------ >BAP1; SWP:P83512; PDB:1ND1A; RFSPRYIELAVVADHGIFTKYNSNLNTIRTRVHEMLNTVNGFYRSVDVHAPLANLEVWSK ------------------------------------------------------------ QDLIKVQKDSSKTLKSFGEWRERDLLPRISHDHAQLLTAVVFDGNTIGRAYTGGMCDPRH -------------------------------------------------------1---- SVGVVRDHSKNNLWVAVTMAHELGHNLGIDHDTGSCSCGAKSCIMASVLSKVLSYEFSDC -----------------------------------2-3----3----------------2 SQNQYETYLTNHNPQCILNKP ---------------1----- >PROSTATIC ACID PHOSPHATAS; SWP:P15309; PDB:1ND6A; KELKFVTLVFRHGDRSPIDTFPTDPIKESSWPQGFGQLTQLGMEQHYELGEYIRKRYRKF ------------------------------------------------------------ LNESYKHEQVYIRSTDVDRTLMSAMTNLAALFPPEGVSIWNPILLWQPIPVHTVPLSEDQ ------------------------------------------------------------ LLYLPFRNCPRFQELESETLKSEEFQKRLHPYKDFIATLGKLSGLHGQDLFGIWSKVYDP --------1--------------------------------------------------- LYCESVHNFTLPSWATEDTMTKLRELSELSLLSLYGIHKQKEKSRLQGGVLVNEILNHMK ------------------------------------------------------------ RATQIPSYKKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHLTELYFEKGEYFVEMYYR ------------------------------------------------------------ NETQHEPYPLMLPGCSPSCPLERFAELVGPVIPQDWSTECMT --------------2---2--------------------1-- >Lysozyme C [Precursor]; SWP:P00698; PDB:1NDGB; EVQLQESGPSLVKPSQTLSLTCSVTGDSIIRDYWSWIRKFPGNKLEYMGYISFSGNTFYH ---------------------1-------------------------------------- PSLKSRISITRDTSKNQHYLQLSSVTTEDTATYYCANWDGTYWGEGTLVTVSAAKTTAPS ----------------------------------1------------------------- VYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSS -------------------2---------------------------------------- VTVTSSTWPSQSITCNVAHPASSTAVDKKI --------------2--------------- >HYPOTHETICAL PROTEIN TA13; SWP:Q9HIL9_THEAC; PDB:1NE2A; GIKNDLEIRLQKLQQQGYPTDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLL ------------------------------------------------------1----- GAESVTAFDIDPDAIETAKRNCGGVNFVADVSEISGKYDTWINPPFDRAFIDKAFETSWI ---------------------1-------------------------------------- YSIGNAKARDFLRREFSARGDVFREEKVYITVPRIYRARIEAVIFGVRNHSF ---------------------------------------------------- >ERGTOXIN; SWP:Q86QT3; PDB:1NE5A; DRDSCVDKSRCAKYGYYQECQDCCKNAGHNGGTCMFFKCKCA ----1-----2--------3--14---------2----3-4- >EPIDIDYMAL SECRETORY PROT; SWP:P79345; PDB:1NEPA; EPVKFKDCGSWVGVIKEVNVSPCPTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVM -------1--------------2----2-------------------------------- GIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLPVKNEYPSIKVVVEWELTDDKNQRFF -------------3-----3---------------------------------------- CWQIPIEVEA 1--------- >MYELIN P0 PROTEIN; SWP:P06907; PDB:1NEU; IVVYTDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYI --------------------1--------------------------------------- DEVGTFKERIQWVGDPSWKDGSIVIHNLDYSDNGTFTCDVKNVGKTSQVTLYVFE -------------------------------------1----------------- >BETA-2-MICROGLOBULIN; SWP:P14433; PDB:1NEZA; GSHSLRYFYTALSRPAISEPWYIAVGYLDDTQFARFDSAGETGTYKLSAPWVEQEGPEYW ------------------------------------------------------------ ARETEIVTSNAQFFRENLQTMLDYYNLSQNGSHTIQVMYGCEVEFFGSLFRAYEQHGYDG ----------------------------------------1------------------- QDYIALNEDLKTWTAADMAAEITRSKWEQAGYTELRRTYLEGPCKDSLLRYLENRKKTQE -------------------------------------------1---------------- CTDPPKTHVTHHARPEGDVTLRCWALGFYPAHITLTWQLNGEELIQDTELVETRPAGDGT ----------------------2------------------------------------- FQKWAAVVVPSGEEQKYTCHVYHEGLPEPLTLRW ------------------2--------------- >PHOSPHATASE; SWP:Q9WZB9; PDB:1NF2A; MYRVFVFDLDGTLLNDNLEISEKDRRNIEKLSRKCYVVFASGRMLVSTLNVEKKYFKRTF ----------------------------------1------------------------- PTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIK ------------------------------------------------------------ SYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPT ------------------------------------------------------------ YLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKE ------------------------------------------------------------ ASDIVTLTNNDSGVSYVLERISTDCLD ------------------------1-- >N15 ALPHA-BETA T-CELL REC; SWP:NA; PDB:1NFDE; YELIQPSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERF --------------------1--------------------------------------- SGSTSGTTATLTISGAQPEDEAAYYCLSSYGDNND -------------------------1--------- >POLYGALACTURONASE I; SWP:P26213; PDB:1NHCA; STCTFTSASEASESISSCSDVVLSSIEVPAGETLDLSDAADGSTITFEGTTSFGYKEWKG --1--------------1------------------------------------------ PLIRFGGKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKN ------------------------------------------------------------ TPVQAISVQATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAI --------------------------------------------------------2--- NSGESISFTGGTCSGGHGLSIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIYKETGD ------------2----------------------------------------------- VSEITYSNIQLSGITDYGIVIEQDYENGSPTGTPSTGIPITDVTVDGVTGTLEDDATQVY ------------------------------------------------------------ ILCGDGSCSDWTWSGVDLSGGKTSDKCENVPSGASC --3----3------------------4--------4 >HAINANTOXIN-I; SWP:P83591; PDB:1NIXA; ECKGFGKSCVPGKNECCSGYACNSRDKWCKVLL -1------2------31----2------3---- >HAINANTOXIN-IV; SWP:P83471; PDB:1NIYA; ECLGFGKGCNPSNDQCCKSSNLVCSRKHRWCKYEI -1------2------31------2------3---- >32.1 KDA PROTEIN IN ADH3-; SWP:Q04299; PDB:1NJRA; KRIILCDTNEVVTNLWQESIPKYLCIHHGHLQSLDSRKGDAHSYAIVSPGNSYGYLGGGF ------------------------------------------------------------ DKALYNYFGGKPFETWFRNQLGGRYHTVGSATVVDLQRCLEECRDGIRYIIHVPTVVAPS --------------------------------------1---1----------------- APIFNPQNPLKTGFEPVFNAWNALHSPKDIDGLIIPGLCTGYAGVPPIISCKSAFALRLY ------------------------------------------------------------ AGDHISKELKNVLIYYLQYPFEPFFPESCKIECQKLGIDIELKSFNVEKDAIELLIPRRI ------------------------------------------------------------ >RHAMNOGALACTURONASE B; SWP:Q00019; PDB:1NKGA; AFGITTSSSAYVIDTNAPNQLKFTVSRSSCDITSIIHYGTELQYSSQGSHIGSGLGSATV -----------------------------1------------------------------ TATQSGDYIKVTCVTDTLTQYMVVHNGDPIIHMATYITAEPSIGELRFIARLNSDLLPNE ------------1----------------------------------------------- EPFGDVSTTADGTAIEGSDVFLVGSETRSKFYSSERFIDDQRHCIAGDAHRVCMILNQYE -------------------------------------------2--------2------- SSSGGPFHRDINSNNGGSYNALYWYMNSGHVQTESYRMGLHGPYSMYFSRSGTPSTSIDT ------------------------------------------------------------ SFFADLDIKGYVAASGRGKVAGTASGADSSMDWVVHWYNDAAQYWTYTSSSGSFTSPAMK ------------------------------------------------------------ PGTYTMVYYQGEYAVATSSVTVSAGSTTTKNISGSVKTGTTIFKIGEWDGQPTGFRNAAN ------------------------------------------------------------ QLRMHPSDSRMSSWGPLTYTVGSSALTDFPMAVFKSVNNPVTIKFTATSAQTGAATLRIG ------------------------------------------------------------ TTLSFAGGRPQATINSYTGSAPAAPTNLDSRGVTRGAYRGLGEVYDVSIPSGTIVAGTNT ------------------------------------------------------------ ITINVISGSSGDTYLSPNFIFDCVELFQ ---------------------------- >NK-LYSIN; SWP:Q29075; PDB:1NKL; GYFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKILRGLCKKIMRSFLRRISWDI ---1--2---------------------------3---------3--------------- LTGKKPQAICVDIKICKE ---------2-----1-- >SIALIC ACID BINDING IG-LI; SWP:Q9Y286; PDB:1NKOA; SNRKDYSLTMQSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAWKAPVATNNPAW -------------------------1---------------------------------- AVQEETRDRFHLLGDPQTKNCTLSIRDARMSDAGRYFFRMEKGNIKWNYKYDQLSVNVTA --------------------1--------------------------------------- LT -- >P58-CL42 KIR; SWP:P43626; PDB:1NKR; RKPSLLAHPGPLVKSEETVILQCWSDVMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFS ----------------------1------------------------------------- ISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPGPTVLAGENVT -------------1---------------------------------------------- LSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPATHGGTYRCFGSFHDSP --2------------------------------------------------2-------- YEWSKSSDPLLVSVT --------------- >PROTHROMBIN; SWP:P00735; PDB:1NL1A; ANKGFLVRKGNLRCLPCSRAFALSLSATDAFWAKYTACESARNPREKLNECLEGNCAEGV -------------1--1--------------------2------------2----3---- GMNYRGNVSVTRSGIECQLWRSRYPHKPEINSTTHPGADLRENFCRNPDGSITGPWCYTT ----------------4---------------------------5-----------4--- SPTLRREECSVPVCGQD --------5----3--- >PROTEIN HI0572; SWP:P44758; PDB:1NM3A; SEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPV ------------------------------------------------------------ FKKYGVDDILVVSVNDTFVNAWKEDEKSENISFIPDGNGEFTEGGLVGKEDLGFGKRSWR ------------------------------------------------------------ YSLVKNGVVEKFIEPNEPGDPFKVSDADTLKYLAPQHQVQESISIFTKPGCPFCAKAKQL --------------------------------------------------1--1------ LHDKGLSFEEIILGHDATIVSVRAVSGRTTVPQVFIGGKHIGGSDDLEKY -------------------------------------------------- >Immnuoglobulin kappa ligh; SWP:A2NVF0; PDB:1NMBL; DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQNPDGTVKLLIYYTSNLHSEVPS ----------------------1------------------------------------- RFSGSGSGTDYSLTISNLEQEDIATYFCQQDFTLPFTFGGGTKLEIRRA ---------------------------1--------------------- >CHYMASE; SWP:P23946; PDB:1NN6A; GGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGRSITVTLGAHNITE ---------------------------1---------------1---------------- EEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRM ------------------------------------------------------------ CRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDFDHNLQLCVGNPRKTAFKGDSGG 2------------------------------3------------3--------------- PLLCAGVAQGIVSYGRSDAKPPAVFTRISHYRPWINQILQAN ---2-------------------------------------- >L-ASPARAGINASE II; SWP:P00805; PDB:1NNSA; LPNITILATGGTIAGGGDSATKSNYTVGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQD ------------------------------------------------------------ MNDNVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTS ----------------1---------------------------1--------------- MSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLG ------------------------------------------------------------ YIHNGKIDYQRTPARKHTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIV ------------------------------------------------------------ SAGVGNGNLYKSVFDTLATAAKTGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQ ------------------------------------------------------------ KARVLLQLALTQTKDPQQIQQIFNQY -------------------------- >NEOCARZINOSTATIN; SWP:P0A3R9; PDB:1NOA; AAPTATVTPSSGLSDGTVVKVAGAGLQAGTAYDVGQCAWVDTGVLACNPADFSSVTADAN ------------------------------------1---------1------------- GSASTSLTVRRSFEGFLFDGTRWGTVDCTTAACQVGLSDAAGNGPEGVAISFN ---------------------------2----2-------------------- >BETA-HEXOSAMINIDASE BETA ; SWP:P07686; PDB:1NOWA; ALWPLPLSVKMTPNLLHLAPENFYISHSPNSTAGPSCTLLEEAFRRYHGYIFGTQVQQLL ------------------------------------1----------------------- VSITLQSECDAFPNISSDESYTLLVKEPVAVLKANRVWGALRGLETFSQLVYQDSYGTFT --------1--------------------------------------------------- INESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQS ------------------------------------------------------------ ITFPELSNKGSYSLSHVYTPNDVRMVIEYARLRGIRVLPEFDTPGHTLSWGKGQKDLLTP ------------------------------------------------------------ CYSLDSFGPINPTLNTTYSFLTTFFKEISEVFPDQFIHLGGDEVEFKCWESNPKIQDFMR 2----------------------------------------------2------------ QKGFGTDFKKLESFYIQKVLDIIATINKGSIVWQEVFDDKAKLAPGTIVEVWKDSAYPEE ------------------------------------------------------------ LSRVTASGFPVILSAPWYLDLISYGQDWRKYYKVEPLDFGGTQKQKQLFIGGEACLWGEY ------------------------------------------------------------ VDATNLTPRLWPRASAVGERLWSSKDVRDMDDAYDRLTRHRCRMVERGIAAQPLYAGYCN -----------------------------------------3----------------3- >DNA POLYMERASE; SWP:P04415; PDB:1NOYA; DEFYISIETVGNNIVERYIDENGKERTREVEYLPTMFRHCKEESKYKDIYGKNCAPQKFP ---------------------------------------1-------------1------ SMKDARDWMKRMEDIGLEALGMNDFKLAYISDTYGSEIVYDRKFVRVANCDIEVTGDKFP ------------------------------------------------------------ DPMKAEYEIDAITHYDSIDDRFYVFDLLNSMYGSVSKWDAKLAAKLDCEGGDEVPQEILD ------------------------------------------------------------ RVIYMPFDNERDMLMEYINLWEQKRPAIFTGWNIEGFDVPYIMNRVKMILGERSMKRFSP ------------------------------------------------------------ IGRVKSKLLQNMYGSKEIYSIDGVSILDYLDLYKKFAFTNLPSFSLESVAQHETKKGKLP ------------------------------------------------------------ YDGPINKLRETNHQRYISYNIIDVESVQAIDKIRGFIDLVLSMSYYAKMPFSGVMSPIKT ------------------------------------------------------------ WDAIIFNSLKGE ------------ >NIDOGEN; SWP:P10493; PDB:1NPEA; GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSI --------------------------------------------1--------------- GRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTG ------------------------------------------------------------ LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQ ------------------------------------------------------------ LCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISK -2----------2----------------------------------------------- EMDTFHPHKQTRLYGITIALSQC ----------------------1 >TOXIN VII; SWP:P15226; PDB:1NPIA; KEGYLMDHEGCKLSCFIRPSGYCGRECGIKKGSSGYCAWPACYCYGLPNWVKVWDRATNK ----------1---2-------3---4---------2----3-4---------------- C 1 >AGGLUTININ; SWP:NA; PDB:1NPLA; DNILYSGETLSPGEFLNNGRYVFIMQEDCNLVLYDVDKPIWATNTGGLDRRCHLSMQSDG ----------------------------1----------------------1-------- NLVVYSPRNNPIWASNTGGENGNYVCVLQKDRNVVIYGTARWATGTNIH ------------------------------------------------- >NEUROPSIN; SWP:Q61955; PDB:1NPMA; ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCKKQKYSVRLGDHSLQSQP -------------------------1---------------1------------------ EQEIQVAQSIQHPCYNNSNP -------------------- >PROGRAMMED CELL DEATH PRO; SWP:Q02242; PDB:1NPUA; SLTFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDA --------------------1--------------------------------------- RFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAISLHPKAKIEESPGAELVVTERIL -----------------------------1-------------------------- >XYS1; SWP:Q59922; PDB:1NQ6A; AGALGDAAAAKGRYFGAAVAANHLGEAAYASTLDAQFGSVTPENEMKWDAVESSRNSFSF ------------------------------------------------------------ SAADRIVSHAQSKGMKVRGHTLVWHSQLPGWVSPLAATDLRSAMNNHITQVMTHYKGKIH ------------------------------------------------------------ SWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVDADAKLCYNDYNTDGQNAK -----------------------------------------------1------------ SNAVYEMVKDFKQRGVPIDCVGFQSHFNSNSPVPSDFQANLQRFADLGVDVQITELDIEG -------------------1---------------------------------------- SGSAQAANYTKVVNACLAVTRCTGITVWGVTDKYSWRSGGTPLLFDGDYNKKPAYDAVLA ---------------2-----2-------------------------------------- AL -- >Pro-epidermal growth fact; SWP:P01133; PDB:1NQLB; DSECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRDLKWW ---1-------2-----1----------2-3--------3-------- >THYMUS AND ACTIVATION-REG; SWP:Q92583; PDB:1NR4A; RGTNVGRECCLEYFKGAIPLRKLKTWYQTSEDCSRDAIVFVTVQGRAICSDPNNKRVKNA --------12----------------------1---------------2----------- VKYLQSL ------- >NEUROTOXIN V, CSE-V; SWP:P46066; PDB:1NRA; KKDGYPVDSGNCKYECLKDDYCNDLCLERKADKGYCYWGKVSCYCYGLPDNSPTKTSGKC -----------1---2-----3---4---------2------3-4--------------1 NPA --- >PROCARBOXYPEPTIDASE B; SWP:P09955; PDB:1NSA; FEGEKVFRVNVEDENDISELHELASTRQIDFWKPDSVTQIKPHSTVDFRVKAEDILAVED -----------------------------------------------------------1 FLEQNELQYEVLINNLRSVLEAQFDSVSR ------------1---------------- >NEURAMINIDASE; SWP:P27907; PDB:1NSCA; EPEWTYPRLSCQGSTFQKALLISPHRFGEARGNSAPLIIREPFIACGPKECKHFALTHYA ----------1----------------------------------2----2--------- AQPGGYYNGTREDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGREWTYIGVDGP ---------------------------------------------3-------------- DSNALIKIKYGEAYTDTYHSYANNILRTQESACNCIGGDCYLMITDGSASGISKCRFLKI --------------------------------3-4----4-------------------- REGRIIKEIFPTGRVEHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRL --------------------5-6---------6-5------------------------- MCTETYLDTPRPDDGSITGPCESNGDKGRGGIKGGFVHQRMASKIGRWYSRTMSKTERMG -7------------------7--------------------------------------- MELYVRYDGDPWTDSDALAHSGVMVSMKEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKK -------------------------------------------1---8------------ TWHSAATAIYCLMGSGQLLWDTVTGVDMAL ----------8------------------- >HEPARAN SULFATE N-DEACETY; SWP:P52848; PDB:1NSTA; DPLWQDPCCDRFPKLLIIGPQKTGTTALYLFLGMHPDLSSNYPSSETFEEIQFFNGHNYH ------------------------------------------------------------ KGIDWYMEFFPISDFYFEKSANYFDSEVAPRRAAALLPKAKVLTILINPADRAYSWYQHQ ------------------------------------------------------------ RAHDDPVALKYTFHEVITAGSDASSKLRALQNRCLVPGWYATHIERWLSAYHANQILVLD ------------------------------------------------------------ GKLLRTEPAKVMDMVQKFLGVTNTIDYHKTLAFDPKKGFWCQLLEGGKTKCLGKSKGRKY ----------------------------------------1---------1--------- PEMDLDSRAFLKDYYRDHNIELSKLLYKMGQTLPTWLREDLQ ------------------------------------------ >mannose-binding protein a; SWP:Q9JJS8; PDB:1NT0A; EPVFGRLVSPGFPEKYGNHQDRSWTLTAPPGFRLRLYFTHFNLELSYRCEYDFVKLTSGT ------------------------------------------------1----------- KVLATLCGQESTDTERAPGNDTFYSLGPSLKVTFHSDYPFTGFEAFYAAEDVDECRPCDH ------1-----------------------------------------------2--3-- YCHYLGGYYCSCRVGYILHQNKHTCSALCSGQVFTGRSGFLSSPEYPQPYPKLSSCAYNI -2-------3-4------------4---5--------------------------5---- RLEEGFSITLDFVESFDVEMHCDSLKIQTDKREYGPFCGKTLPPRIETDSNKVTITFTTD ---------------------6---------------6---------------------- ESGNHTGWKIHYTSTA ---------------- >GLUCOSE-1-PHOSPHATASE; SWP:P19926; PDB:1NT4A; QTVPEGYQLQQVLMMSRANLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYM ------------------------------------------------------------ GHYMREWLAEQGMVKSGECPPPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKM ------------------1------------------------------1---------- GTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQC -----------------------------------------------------2-----2 SLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVL ------------------------------------------------------------ SKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTAL ------------------------------------------------------------ DFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQ ------------------------------------------------------------ RVTLELSGCPIDADGFCPMDKFDSVLNEAVK --------3-------3-------------- >NEUROTOXIN I; SWP:P01382; PDB:1NTN; ITCYKTPIITSETCAPGQNLCYTKTWCDAWCGSRGKVIELGCAATCPTVESYQDIKCCST --1----------2------1-----3---3----------2---4----------45-- DNCNPHPKQKRP --5--------- >ALPHA-NEUROTOXIN; SWP:P01416; PDB:1NTX; RICYNHQSTTRATTKSCEENSCYKKYWRDHRGTIIERGCGCPKVKPGVGIHCCQSDKCNY --1-------------2----1----------------2-3----------34----4-- >TRIPLE FUNCTIONAL DOMAIN ; SWP:O75962; PDB:1NTYA; ARRKEFIMAELIQTEKAYVRDLRECMDTYLWEMTSGVEEIPPGIVNKELIIFGNMQEIYE ------------------------------------------------------------ FHNNIFLKELEKYEQLPEDVGHCFVTWADKFQMYVTYCKNKPDSTQLILEHAGSYFDEIQ ----------------------1------------------------------------- QRHGLANSISSYLIKPVQRITKYQLLLKELLTCCEEGKGEIKDGLEVMLSVPKRANDAMH ------------------------------------------------------------ LSMLEGFDENIESQGELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRS ------------------------------------------------------------ KYLYKSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREV ------------------------------------------------------------ IQERT ----- >Fibroblast growth factor ; SWP:P21802; PDB:1NUNB; KRAPYWTNTEKEKRLHAVPAANTVKFRCPAGGNPPTRWLKNGKEFKQEHRIGGYKVRNQH ---------------------------1-------------------------------- WSLIESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSPHRPILQAGLPANASTVVGGDV ----------------1------------------------------------------- EFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEAD ---2-------------------------------------------------------- AGEYICKVSNYIGQANQSAWLTVLP -----2------------------- >THIOREDOXIN; SWP:P80579; PDB:1NW2A; ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDEN ----------------------------1--1---------------------------- PETTSQFGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQLADVLQ --------------------------------------------- >AZURIN; SWP:P34097; PDB:1NWPA; AECKVTVDSTDQMSFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIA --1----------------------1---------------------------------- TDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHISM ------------------------------------------------------------ MKGTVTLK -------- >COMPLEMENT DECAY-ACCELERA; SWP:P08174; PDB:1NWVA; FRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTA ---1------------------------------2---------------1--------- VEFCKKKSCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWS ---2----3--------------------------4-------------3---------- DPLPECREH -----4--- >NEUROTOXIN B; SWP:Q90VW1; PDB:1NXB; RICFNQHSSQPQTTKTCSPGESSCYHKQWSDFRGTIIERGCGCPTVKPGIKLSCCESEVC --1-------------2------1----------------2-3----------34----4 NN -- >Mannosyl-oligosaccharide ; SWP:P45700; PDB:1NXCA; FLPPVGVENREPADATIREKRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGHSSSLFGN ------------------------------------------------------------ IKGATIVDALDTLFIMGMKTEFQEAKSWIKKYLDFNVNAEVSVFEVNIRFVGGLLSAYYL ------------------------------------------------------------ SGEEIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHL ------------------------------------------------------------ EFMHLSHLSGDPVFAEKVMKIRTVLNKLDKPEGLYPNYLNPSSGQWGQHHVSVGGLGDSF ------------------------------------------------------------ YEYLLKAWLMSDKTDLEAKKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLT ------------------------------------------------------------ CFAGGMFALGADGAPEARAQHYLELGAEIARTCHESYNRTYVKLGPEAFRFDGGVEAIAT 1-------------------------------1--------------------------- RQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEALESHCRVNGGYSGLRDVYIAR ------------------------------------------------------------ ESYDDVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFNTEAHPFPILR ----------------------------------------------- >Genome polyprotein M; SWP:P03599; PDB:1NY72; MEQNLFALSLDDTSSVRGSLLDTKFAQTRVLLSKAMAGGDVLLDEYLYDVVNGQDFRATV ------------------------------------------------------------ AFLRTHVITGKIKVTATTNISDNSGCCLMLAINSGVRGKYSTDVYTICSQDSMTWNPGCK ------------------------------------------------------------ KNFSFTFNPNPCGDSWSAEMISRSRVRMTVICVSGWTLSPTTDVIAKLDWSIVNEKCEPT ------------------------------------------------------------ IYHLADCQNWLPLNRWMGKLTFPQGVTSEVRRMPLSIGGGAGATQAFLANMPNSWISMWR ------1----------------------------------------------------- YFRGELHFEVTKMSSPYIKATVTFLIAFGNLSDAFGFYESFPHRIVQFAEVEEKCTLVFS ------------------------------------------------------------ QQEFVTAWSTQVNPRTTLEADGCPYLYAIIHDSTTGTISGDFNLGVKLVGIKDFCGIGSN ------------------------------------------------------1----- PGIDGSRLL --------- >RIESKE IRON-SULFUR PROTEI; SWP:O52396; PDB:1NYKA; TPEKEPLKPGDILVYAQGGGEPKPIRLEELKPGDPFVLAYPMDPKTKVVKSGEAKNTLLV ------------------------------------------------------------ ARFDPEELAPEVAQHAAEGVVAYSAVCTHLGCIVSQWVADEEAALCPCHGGVYDLRHGAQ -------------------------------1---------------1------------ VIAGPPPRPVPQLPVRVEDGVLVAAGEFLGPVGVQA ------------------------------------ >IMMUNOGENIC PROTEIN MPT70; SWP:Q50769; PDB:1NYOA; GDLVGPGCAEYAAANPTGPASVQGMSQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDT -------1---------------------------------------------------- LNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANVVGTRQTLQ ------------------------------------------------------------ GASVTVTGQGNSLKVGNADVVCGGVSTANATVYMIDSVLMPPA ---------------------1--------------------- >Inhibin beta A chain [Pre; SWP:P08476; PDB:1NYSB; LECDGNICCKKQFFVSFKDIGWNDWIIAPSGYHANYCEGECPSHILKSCCVPTKLRPMSM --1----21---------------------------3---4--------2---------- LYYDDGQNIIKKDIQNMIVEECGCS ---------------------3-4- >COMPLEMENT C1S COMPONENT; SWP:P09871; PDB:1NZIA; EPTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISE -------------------------------------------------1---------- EGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDV ----1---------------------------------------------------2--- DVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVN ---3---2--------3-4------------4--- >ERVATAMIN C; SWP:P83654; PDB:1O0EA; LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKKN ---------------------1---------------------------------2---- HGCLGGAFVFAYQYIINNGGIDTQANYPYKAVQGPCQAASKVVSIDGYNGVPFCNEALKQ --1--------------------------------2-----------------3------ AVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLNHGVTIVGYQANYWIVRNSWGRYWGE -----------------------------4------------------------------ KGYIRMLRVGGCGLCGIARLPYYPTKA -----------3--4------------ >CONSERVED HYPOTHETICAL PR; SWP:NA; PDB:1O3UA; HMDAAKDDLEHAKHDLEHGFYNWACFSSQQAAEKAVKAVFQRGAQAWGYSVPDFLGELSS ------------------------1----------------------------------- RFEIPEELMDHALELDKACDALPSGSPRNRYSRIEAERLVNYAEKIIRFCEDLLSRI ------------------1-------------------------------------- >PIN (PILT N-TERMINUS) DOM; SWP:O29664; PDB:1O4WA; KVRCAVVDTNVLYVYLNKADVVGQLREFGFSRFLITASVKRELEKLESLRGKEKVAARFA ---1-------------------------------------------------------- LKLLEHFEVVETESEGDPSLIEAAEKYGCILITNDKELKRKAKQRGIPVGYLKEDKRVFV ----------------------------1------------------------------- ELL --- >3-OXOACYL-(ACYL CARRIER P; SWP:Q9X0Q1; PDB:1O5IA; GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLL ---------------------------------1----------------1--------- FEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRI ------------------------------------------------------------ VAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL ------------------------------------------------------------ SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLSKFPL ------------------------------------------------------ >ATP PHOSPHORIBOSYLTRANSFE; SWP:Q9X0D2; PDB:1O63A; LKLAIPKGRLEEKVTYLKKTGVIFERESSILREGKDIVCFVRPFDVPTYLVHGVADIGFC ------------------------------------------------------------ GTDVLLEKETSLIQPFFIPTNISRVLAGPKGRGIPEGEKRIATKFPNVTQRYCESKGWHC ----------------------------------------------------1------1 RIIPLKGSVELAPIAGLSDLIVDITETGRTLKENNLEILDEIFVIRTHVVVNPVSYRTKR ------------------------------------------------------------ EEVVSFLEKLQEVIEHDSNE -------------------- >TRYPAREDOXIN; SWP:O77404; PDB:1O73A; MSGLAKYLPGATNLLSKSGEVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA ---------------------------------------1--1----------------- KNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITINADTG ------------------------------------------------------------ AIIGTQARTRVIEDPDGANFPWPN ------------------------ >Tumor necrosis factor-ind; SWP:P98066; PDB:1O7BT; GVYHREARSGKYKLTYAEAKAVCEFEGGHLATYKQLEAARKIGFHVCAAGWMAKGRVGYP ----------------------1-----------------------2------------- IVKPGPNCGFGKTGIIDYGIRLNRSERWDAYCYNPHAK -------2-----------------------1------ >SMALL INDUCIBLE CYTOKINE ; SWP:P02778; PDB:1O7ZA; CTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAIKNLLKAV 1-2------------------------1----------------2--------------- S - >PECTATE LYASE C; SWP:P11073; PDB:1O88A; ATDTGGYAATAGGNVTGAVSKTATSMQDIVNIIDAARLDANGKKVKGGAYPLVITYTGNE ------------------------------------------------------------ DSLINAAAANICGQWSKDPRGVEIKEFTKGITIIGANGSSANFGIWIKKSSDVVVQNMRI -----------1------------------------------------------------ GYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTV ----------------------------------1------------------------- SYNYIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQRGGLVHAYNNLYTNITGS ------------------------------------------------------------ GLNVRQNGQALIENNWFEKAINPVTSRYDGKNFGTWVLKGNNITKPADFSTYSITWTADT ------------------------------------------------------------ KPYVNADSWTSTGTFPTVAYNYSPVSAQCVKDKLPGYAGVGKNLATLTSTACK ----------------------------2----------------------2- >GUANYLIN; SWP:Q02747; PDB:1O8RA; VTVQDGNFSFSLESVKKLKDLQEPQEPRVGKLRNFAPIPGEPVVPILCSNPNFPEELKPL -----------------------------------------------1------------ CKEPNAQEILQRLEEIAEDPGTCEICAYAACTGC 1---------------------2--3----2--3 >ENDO-BETA-1,4-GLUCANASE; SWP:O00095; PDB:1OA2A; TSCDQWATFTGNGYTVSNNLWGASAGSGFGCVTVVSLSGGASWHADWQWSGGQNNVKSYQ --1---------------------------1----------------------------- NSQIAIPQKRTVNSISSMPTTASWSYSGSNIRANVAYDLFTAANPNHVTYSGDYELMIWL ------------------------------------------------------------ GKYGDIGPIGSSQGTVNVGGQSWTLYYGYNGAMQVYSFVAQTNTTNYSGDVKNFFNYLRD ------------------------------------------------------------ NKGYNAAGQYVLSYQFGTEPFTGSGTLNVASWTASIN ------------------------------------- >ENDO-BETA-1-4-GLUCANASE; SWP:Q8NJY6; PDB:1OA3A; TSCDQYATFSGNGYIVSNNLWGASAGSGFGCVTSVSLNGAASWHADWQWSGGQNNVKSYQ --1---------------------------1----------------------------- NVQINIPQKRTVNSIGSMPTTASWSYSGSDIRANVAYDLFTAANPNHVTYSGDYELMIWL ------------------------------------------------------------ GKYGDIGPIGSSQGTVNVGGQTWTLYYGYNGAMQVYSFVAQSNTTSYSGDVKNFFNYLRD ------------------------------------------------------------ NKGYNAGGQYVLSYQFGTEPFTGSGTLNVASWTASIN ------------------------------------- >ENDO-BETA-1,4-GLUCANASE; SWP:Q9KIH1; PDB:1OA4A; NQQICDRYGTTTIQDRYVVQNNRWGTSATQCINVTGNGFEITQADGSVPTNGAPKSYPSV ----1-------------------------1----------------------------- YDGCHYGNCAPRTTLPMRISSIGSAPSSVSYRYTGNGVYNAAYDIWLDPTPRTNGVNRTE ---2----2--------------------------------------------------- IMIWFNRVGPVQPIGSPVGTAHVGGRSWEVWTGSNGSNDVISFLAPSAISSWSFDVKDFV ------------------------------------------------------------ DQAVSHGLATPDWYLTSIQAGFEPWEGGTGLAVNSFSSAVNA ------------------------------------------ >SUPEROXIDE DISMUTASE; SWP:P00446; PDB:1OALA; QDLTVKMTDLQTGKPVGTIELSQNKYGVVFIPELADLTPGEHGFHIHQNGSCASSEKDGK ---------------------------------------------------1-------- VVLGGAAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLKELKGH ------------------------------------------------------------ AIMIHAGGDNHSDMPKALGGGGARVACGVIQ --------------------------1---- >Ig lambda-1 chain V regio; SWP:P01724; PDB:1OAQL; QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGV ---------------------1-------------------------------------- PARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHLVFGGGTKLTVLG -----------------------------1-------------------- >CARBOXYPEPTIDASE T; SWP:P29068; PDB:1OBR; DFPSYDSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEP ------------------------------------------------------------ EVLYTALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDI ------------------------------------------------------------ SSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETA ----------------------------------11------------------------ AMRDFINSRVVGGKQQIKTLITFHTYSELILYPYGYTYTDVPSDMTQDDFNVFKTMANTM ------------------------------------------------------------ AQTNGYTPQQASDLYITDGDMTDWAYGQHKIFAFTFEMYPTSYNPGFYPPDEVIGRETSR ------------------------------------------------------------ NKEAVLYVAEKADCPYSVIGKSC -------------2--------2 >CELLOBIOHYDROLASE II; SWP:Q9C1S9; PDB:1OC7A; APYNGNPFEGVQLWANNYYRSEVHTLAIPQITDPALRAAASAVAEVPSFQWLDRNVTVDT ------------------------------------------------------------ LLVQTLSEIREANQAGANPQYAAQIVVYDLPDRDCAAAASNGEWAIANNGVNNYKAYINR ----------------------------------1------------------------- IREILISFSDVRTILVIEPDSLANMVTNMNVPKCSGAASTYRELTIYALKQLDLPHVAMY ---------------------------------1-------------------------- MDAGHAGWLGWPANIQPAAELFAKIYEDAGKPRAVRGLATNVANYNAWSVSSPPPYTSPN ------------------------------------------------------------ PNYDEKHYIEAFRPLLEARGFPAQFIVDQGRSGKQPTGQKEWGHWCNAIGTGFGMRPTAN ---------------------------------------------2-------------- TGHQYVDAFVWVKPGGECNGTSDTTAARYDYHCGLEDALKPAPEAGQWFNEY --------------------------------2------------------- >ENDOTHIAPEPSIN; SWP:P11838; PDB:1OEWA; STGSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVQTIYTPS ------------------------------------------------------------ KSTTAKLLSGATWSISYGDGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTI ------------------------------------------------------------ DGLLGLAFSTLNTVSPTQQKTFFDNAKASLDSPVFTADLGYHAPGTYNFGFIDTTAYTGS ------------------------------------------------------------ ITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATVVSAYWAQVSGA ------------------------------------------------------------ KSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGI ------------1----------------------------------1------------ NIFGDVALKAAFVVFNGATTPTLGFASK ---------------------------- >PORE-FORMING PEPTIDE AMEO; SWP:P34095; PDB:1OF9A; GEILCNLCTGLINTLENLLTTKGADKVKDYISSLCNKASGFIATLCTKVLDFGIDKLIQL ----1--2--------------------------3----------3-------------- IEDKVDANAICAKIHAC ----------2-----1 >T-cell receptor beta chai; SWP:P01850; PDB:1OGAD; QLLEQSPQFLSIQEGENLTVYCNSSSVFSSLQWYRQEPGEGPVLLVTVVTGGEVKKLKRL ---------------------1-------------------------------------- TFQFGDARKDSSLHITAAQPGDTGLYLCAGAGSQGNLIFGKGTKLSVKPNIQNPDPAVYQ ---------------------------1-------------------------------- LRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKTVLDMRSMDFKSNSAVAWSNKSDF -----------2------------------------------------------------ ACANAFNNSIIPEDTFFPSP -2------------------ >T-cell receptor beta chai; SWP:P01850; PDB:1OGAE; GITQSPKYLFRKEGQNVTLSCEQNLNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAE --------------------1--------------------------------------- GYSVSREKKESFPLTVTSAQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPE ----------------------------1------------------------------- VAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALN --------------------2--------------------------------------- DSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD -------------------------2---------------------------------- Q - >Dextranase [Precursor]; SWP:P48845; PDB:1OGOX; TTANTHCGADFCTWWHDSGEINTQTPVQPGNVRQSHKYSVQVSLAGTNNFHDSFVYESIP ------1----1------------------------------------------------ RNGNGRIYAPTDPPNSNTLDSSVDDGISIEPSIGLNMAWSQFEYSHDVDVKILATDGSSL ------------------------------------------------------------ GSPSDVVIRPVSISYAISQSDDGGIVIRVPADANGRKFSVEFKTDLYTFLSDGNEYVTSG ------------------------------------------------------------ GSVVGVEPTNALVIFASPFLPSGMIPHMTPDNTQTMTPGPINNGDWGAKSILYFPPGVYW ------------------------------------------------------------ MNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKGAIEYFTKQNFYATGHGILSGENYV ------------------------------------------------------------ YQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQI ------------------------------------------------------------ SDYKQVGAFFFQTDGPEIYPNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCHNDPIIQ ------------------------------------------------------------ MGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKSISMTVSNV ------------------------------------------------------------ VCEGLCPSLFRITPLQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAASGLTMGLAISAWT -2---2------------------------------------------------------ IGGQKVTMENFQANSLGQFNIDGSYWGEWQIS -------------------------------- >POLYGALACTURONASE INHIBIT; SWP:P58822; PDB:1OGQA; ELCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGL --1-----------------------------12--------2----------------- NLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDF ------------------------------------------------------------ LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMT ------------------------------------------------------------ ISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKV ------------------------------------------------------------ GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYAN ----------------------------------------3------------------- NKCLCGSPLPACT --3-4------4- >STAPHOSTATIN A; SWP:Q99SX7; PDB:1OH1A; GSMEQFELFSIDKFKCNSEAKYYLNIIEGEWHPQDLNDSPLKFILSTSDDSDYICKYINT ---------------1--------------------------------------1----- EHKQLTLYNKNNSSIVIEIFIPNDNKILLTIMNTEALGTSPRMTFIKHK ------------------------------------------------- >IMMUNOGLOBULIN; SWP:NA; PDB:1OHQA; EVQLLESGGGLVQPGGSLRLSCAASGFRISDEDMGWVRQAPGKGLEWVSSIYGPSGSTYY ---------------------1-------------------------------------- ADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASALEPLSEPLGFWGQGTLVTVSS -----------------------------------1------------------------ >CG14704 PROTEIN; SWP:Q9VGN3; PDB:1OHTA; TARLLSRSDWGARLPKSVEHFQGPAPYVIIHHSYPAVCYSTPDCKSRDQDFHQLERGWND -------------------------------------1-----1---------------- IGYSFGIGGDGIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQLDAAKNLIAFG ------------------------------------------------------------ VFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTHINDTEGVS ------------------------------------------------ >HYPOTHETICAL PROTEIN AF21; SWP:O28085; PDB:1OI0A; GSSMKISRGLLKTILEAAKSAHPDEFIALLSGSKDVMDELIFLPFVSIGMKVFGTVHSHP ------------------------------------------------------------ SPSCRPSEEDLSLFTRFGKYHIIVCYPYDENSWKCYNRKGEEVELEVV ---1--------------------1----------------------- >RC-RNASE6 RIBONUCLEASE; SWP:Q9DFY5; PDB:1OJ8A; DWDTFQKKHLTDTKKVKCDVEMKKALFDCKKTNTFIFARPPRVQALCKNIKNNTNVLSRD -----------------1----------2-----------------3------------- VFYLPQCNRKKLPCHYRLDGSTNTICLTCMKELPIHFAGVGKCP ------1------2-----------4--3-------------4- >ENDOGLUCANASE I; SWP:P56680; PDB:1OJJA; KPGETKEVHPQLTTFRCTKRGGCKPATNFIVLDSLSHPIHRAEGLGPGGCGDWGNPPPKD ----------------1-----1--------------------------2---------- VCPDVESCAKNCIMEGIPDYSQYGVTTNGTSLRLQHILPDGRVPSPRVYLLDKTKRRYEM -3-----3---2------------------------------------------------ LHLTGFEFTFDVDATKLPCGMNSALYLSEMHPTGAKSKYNPGGAYYGTGYCDAQCFVTPF ------------------4-------------------------------5---6----- INGLGNIEGKGSCCNSMDIWEANSRASHVAPHTCNKKGLYLCEGEECAFEGVCDKNGCGW ------------65-------------------7-------8----8-----7----9-- NNYRVNVTDYYGRGEEFKVNTLKPFTVVTQFLANRRGKLEKIHRFYVQDGKVIESFYTNK ------------------------------------------------------------ EGVPYTNMIDDEFCEATGSRKYMELGATQGMGEALTRGMVLAMSIWWDQGGNMEWLDHGE -------------9---------------------------------------------- AGPCAKGEGAPSNIVQVEPFPEVTYTNLRWGEIGSTYQ ---4---------------------------------- >SURFACE PROTEIN; SWP:Q51225; PDB:1OJT; GSADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNA --------------------------------------------1----1---------- AVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFL ------------------------------------------------------------ DPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPFIPEDPRIIDSSGALA ------------------------------------------------------------ LKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRF ------------------------------------------------------------ DNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAV ------------------------------------------------------------ TDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHKAYFDARVIPG ------------------------------------------------------------ VAYTSPEVAWVGETELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRII ------------------------------------------------------------ GGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHPHPTLGESIGMAAEVALGTCTDLPPQ ------------------------------------------------------------ KK -- >ALPHA-AMYLASE INHIBITOR H; SWP:P01092; PDB:1OK0A; DTTVSEPAPSCVTLYQSWRYSQADNGCAETVTVKVVYEDDTEGLCYAVAPGQITTVGDGY ----------1---------------1-----------------2--------------- IGSHGHARYLARCL ------------2- >MAJOR ENVELOPE PROTEIN E; SWP:P12823; PDB:1OK8A; MRCIGISNRDFVEGVSGGSWVDIVLEHGSCVTTMAKNKPTLDFELIKTEAKQPATLRKYC --1--------------------------1-----------------------------2 IEAKLTNTTTESRCPTQGEPTLNEEQDKRFVCKHSMVDRGWGNGCGLFGKGGIVTCAMFT -------------3-----------------4------------3----------4---- CKKNMEGKIVQPENLEYTVVITPHGKEVKITPQSSITEAELTGYGTVTMECSPRTGLDFN 2-------------------------------------------------5--------- EMVLLQMKDKAWLVHRQWFLDLPLPWLPGADTQGSNWIQKETLVTFKNPHAKKQDVVVLG ------------------------------------------------------------ SQEGAMHTALTGATEIQMSSGNLLFTGHLKCRLRMDKLQLKGMSYSMCTGKFKVVKEIAE ------------------------------5----------------6------------ TQHGTIVIRVQYEGDGSPCKIPFEIMDLEKRHVLGRLITVNPIVTEKDSPVNIEAEPPFG ------------------6----------------------------------------- DSYIIIGVEPGQLKLNWFKK -------------------- >VISCOTOXIN A3; SWP:P01538; PDB:1OKHA; KSCCPNTTGRNIYNACRLTGAPRPTCAKLSGCKIISGSTCPSDYPK --12-----------3---------3-----2-------1------ >HYPOTHETICAL PROTEASE YEA; SWP:P76256; PDB:1OKJA; LRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQDILTTSGTSLTDINALA ------------1----------------1------------------------------ YGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGAWRKNGATRVLAAIDARMG ------------------------------------------------------------ EVYWAEYQRDENGIWHGEETEAVLKPEIVHERMQQLSGEWVTVGTGWQAWPDLGKESGLV ------------------------------------------------------------ LRDGEVLLPAAEDMLPIACQMFAEGKTVAVEHAEPVYLR --------------------------------------- >IMMUNOGLOBULIN G; SWP:NA; PDB:1OL0A; QVQLVESGGGLVQPGGSLRLSCAASGFTFSSYASWFRQAPGKEREIVSAVSGSGGSTYYA ---------------------1-------------------------------------- DSVRGRFTISRDNSKNTLYLQNSLRAEDTAVYYCAREPRIPRPPSFDYWGQGTLVTVSS ---------------------------------1------------------------- >NK RECEPTOR; SWP:O76016; PDB:1OLLA; TLPKPFIWAEPHFMVPKEKQVTICCQGNYGAVEYQLHFEGSLFAVDRPKPPERINKVKFY ------------------------1----------------------------------- IPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYC -------------1---------------------------------------------2 RLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSE ---------------------------------------------2-------------- PVKLLVTG -------- >ENDO-BETA-1,4-GLUCANASE; SWP:Q8NJY3; PDB:1OLRA; IRSLCELYGYWSGNGYELLNNLWGKDTATSGWQCTYLDGTNNGGIQWSTAWEWQGAPDNV ----1----------------------------1-------------------------- KSYPYVGKQIQRGRKISDINSMRTSVSWTYDRTDIRANVAYDVFTARDPDHPNWGGDYEL ------------------------------------------------------------ MIWLARYGGIYPIGTFHSQVNLAGRTWDLWTGYNGNMRVYSFLPPSGDIRDFSCDIKDFF ------------------------------------------------------------ NYLERNHGYPAREQNLIVYQVGTECFTGGPARFTCRDFRADLW ------------------------------------------- >SEMAPHORIN 4D; SWP:Q92854; PDB:1OLZA; FAPIPRITWEHREVHLVQFHEPDIYNYSALLLSEDKDTLYIGAREAVFAVNALNISEKQH ------------------------------------------------------------ EVYWKVSEDKKAKCAEKGKSKQTECLNYIRVLQPLSATSLYVCGTNAFQPACDHLNLTSF -------------1----------1-----------------2--------2-------- KFLGKNEDGKGRCPFDPAHSYTSVMVDGELYSGTSYNFLGSEPIISRNSSHSPLRTEYAI ------------------------------------------------------------ PWLNEPSFVFADVIRKSPGEDDRVYFFFTEVSVEYEFVFRVLIPRIARVCKGDQGGLRTL -------------------------------------------------3---------- QKKWTSFLKARLICSRPDSGLVFNVLRDVFVLRSPGLKVPVFYALFTPQLNNVGLSAVCA -------------4--------------------------------------------4- YNLSTAEEVFSHGKYMQSTTVEQSHTKWVRYNGPVPKPRPGACIDSEARAANYTSSLNLP ------------------------------------------3----------------- DKTLQFVKDHPLMDDSVTPIDNRPRLIKKDVNYTQIVVDRTQALDGTVYDVMFVSTDRGA ------------------------------------------------------------ LHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQAPLAFCGKHG -------------------------------------------------------5---- TCEDCVLARDPYCAWSPPTATCVALHQTESPSRGLIQEMSGDASVCPDKSKGSYRQHFFK -6--7-------5--------7-----------------------6-------------- HGGTAELKCSQKSNLARVFWKFQNGVLKAESPKYGLMGRKNLLIFNLSEGDSGVYQCLSE --------8-----------------------------------------------8--- ERVKNKTVFQVVAKHVLEVKVV ---------------------- >XYLANASE INHIBITOR PROTEI; SWP:Q8L5C6; PDB:1OM0A; AGGKTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGHDLSSVG ------------------------1----------------------------------- ADIKHCQSKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNSYFGGSKPSVPRPFGDAWL -----1------------------------------------------------------ DGVDLFLEHGTPADRYDVLALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGI ------------------------------------------------------------ FERVHVRTYESDKWCNQNLGWEGSWDKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGV ------------------------------------------------------------ APVAQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA ---------------------------------- >ALPHA-NEUROTOXIN TX12; SWP:Q9GQW3; PDB:1OMYA; VRDAYIAQNYNCVYHCARDAYCNELCTKNGAKSGSCPYLGEHKFACYCKDLPDNVPIRVP -----------1---2-----3---4---------2---------3-4------------ GKCH --1- >ALPHA-1,4-N-ACETYLHEXOSAM; SWP:Q9ES89; PDB:1OMZA; ALDSFTLIMQTYNRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPIPV ------------------------------------------------------------ IFKPQTANKMRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIGFVPRK ------------------------------------------------------------ HVSTSSGIYSYGGFELQTPGPGNGDQYSMVLIGASFFNSKYLELFQKQPAAVHALIDETQ ------------------------------------------------------------ NCDDIAMNFLVTRHTGKPSGIFVKPINMVNLEAEHFLQRSYCINKLVNIYDGMPLKYSNI -1---------------------------------------1------------------ MISQFGFPYANHK ------------- >GLUTATHIONE REDUCTASE; SWP:Q94655; PDB:1ONFA; VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDIL --------------------------------------1----1---------------- ENSRHYGFDTKFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLEGRNILI ------------------------------------------------------------ AVGNKPVFPPVKGIENTISSDEFFNIKESKKIGIVGSGYIAVELINVIKRLGIDSYIFAR ------------------------------------------------------------ GNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHV ------------------------------------------------------------ IYCVGRSPDTENLKLEKLNVETNNNYIVVDENQRTSVNNIYAVGDCCMVKFYNVQLTPVA ------------------------------------------------------------ INAGRLLADRLFLKKTRKTNYKLIPTVIFSHPPIGTIGLSEEAAIQIYGKENVKIYESKF ------------------------------------------------------------ TNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGLNADEIVQGFAVALKMNATKKD ------------------------------------------------------------ FDETIPIHPTAAEEFLTLQ ------------------- >T-CELL SURFACE GLYCOPROTE; SWP:P06126; PDB:1ONQA; PLSFHVIWIASFYNHSWKQNLVSGWLSDLQTHTWDSNSSTIVFLWPWSRGNFSNEEWKEL ------------------------------------------------------------ ETLFRIRTIRSFEGIRRYAHELQFEYPFEIQVTGGCELHSGKVSGSFLQLAYQGSDFVSF ------------------------------------------------------------ QNNSWLPYPVAGNMAKHFCKVLNQNQHENDITHNLLSDTCPRFILGLLDAGKAHLQRQVK ------------------------------------------------------------ PEAWLSHGPSPGPGHLQLVCHVSGFYPKPVWVMWMRGEQEQQGTQRGDILPSADGTWYLR -------------------1---------------------------------------- ATLEVAAGEAADLSCRVKHSSLEGQDIVLYWHHH --------------1------------------- >ODORANT BINDING PROTEIN L; SWP:O02372; PDB:1OOHA; HMTMEQFLTSLDMIRSGCAPKFKLKTEDLDRLRVGDFNFPPSQDLMCYTKCVSLMAGTVN -----------------1----------------------------2---1--------- KKGEFNAPKALAQLPHLVPPEMMEMSRKSVEACRDTHKQFKESCERVYQTAKCFSENADG --------------------------------3----------2--------3------- QFMWP ----- >FAB 2G12, LIGHT CHAIN; SWP:NA; PDB:1OP3K; VVMTQSPSTLSASVGDTITITCRASQSIETWLAWYQQKPGKAPKLLIYKASTLKTGVPSR ---------------------1-------------------------------------- FSGSGSGTEFTLTISGLQFDDFATYHCQHYAGYSATFGQGTRVEIKRTVAAPSVFIFPPS --------------------------1--------------------------------- DEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTL ------------2----------------------------------------------- SKADYEKHKVYACEVTHQGLSSPVTKSFNRG ------------2------------------ >NEURAL-CADHERIN; SWP:P15116; PDB:1OP4A; EASGEIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESSEPADFKVDE --------1------------------------------1-------------------- DGTVYAVRSFPLTAEQAKFLIYAQDKETQEKWQVAVNLSREPTLTEEPMKEPHEIEEIVF ------------------------------------------------------------ PRQLAKHSGALQRQKR ---------------- >HL6 CAMEL VHH FRAGMENT; SWP:P61626; PDB:1OP9A; QVQLQESGGGSVQAGGSLRLSCSASGYTYISGWFRQAPGKEREGVAAIRSSDGTTYYADS ---------------------1-------------------------------------- VKGRFTISQDNAKNTVYLQMNSLKPEDTAMYYCAATEVAGWPLDIGIYDYWGQGTEVTVS --------------------------------1--------------------------- S - >AUGMENTER OF LIVER REGENE; SWP:Q63042; PDB:1OQCA; EDCPQDREELGRNTWAFLHTLAAYYPDMPTPEQQQDMAQFIHIFSKFYPCEECAEDIRKR -------------------------------------------------1--1------- IDRSQPDTSTRVSFSQWLCRLHNEVNRKLGKPDFDCSRVDERWRDGWKDGSC ------------------2----------------2---------------- >Beta-galactoside-specific; SWP:P81446; PDB:1OQLB; DDVTCSASEPTVRIVGRNGMCVDVRDDDFRDGNQIQLWPSKSNNDPNQLWTIKRDGTIRS ------------------------------------------------------------ NGSCLTTYGYTAGVYVMIFDCNTAVREATLWQIWGNGTIINPRSNLVLAASSGIKGTTLT ---1----------------1--------------------------------------- VQTLDYTLGQGWLAGNDTAPREVTIYGFRDLCMESNGGSVWVETCVSSQKNQRWALYGDG -------------------------------2------------2--------------- SIRPKQNQDQCLTCGRDSVSTVINIVSCSAGSSGQRWVFTNEGAILNLKNGLAMDVAQAN ----------3----------------3-------------------------------- PKLRRIIIYPATGKPNQMWLPVP ----------------------- >Phospholipase A2 RV-4 [Pr; SWP:Q02471; PDB:1OQSB; NLFQFARMINGKLGAFSVWNYISYGCYCGWGGQGTPKDATDRCCFVHDCCYGGVKGCNPK -------------------------1-2--------------32----45------6--- LAIYSYSFQRGNIVCGRNNGCLRTICECDRVAANCFHQNKNTYNKEYKFLSSSKCRQRSE --------------7-----6----7-5------3-------------------1----- QC -4 >TOXIN-COREGULATED PILUS S; SWP:P23024; PDB:1OQVA; DSQNMTKAAQSLNSIQVALTQTYRGLGNYPATADATAASKLTSGLVSLGKISSDEAKNPF ------------------------------------------------------------ IGTNMNIFSFPRNAAANKAFAISVDGLTQAQCKTLITSVGDMFPYIAIKAGGAVALADLG -------------------------------1---------------------------- DFENSAAAAETGVGVIKSIAPASKNLDLTNITHVEKLCKGTAPFGVAFGNS -------------------------------------1------------- >VISCOTOXIN C1; SWP:P83554; PDB:1ORLA; KSCCPNTTGRNIYNTCRFAGGSRERCAKLSGCKIISASTCPSDYPK --12-----------3---------3-----2-------1------ >Voltage-gated potassium c; SWP:Q9YDF8; PDB:1ORQB; DVQLQESGPGLVKPSQSLSLTCTVTGYSITSLYAWNWIRQFPGNKLEWMGYINYSGYTSY ---------------------1-------------------------------------- NPSLKSRISITRDTSKNQFFLQLHSVTTEDTATYSCTRGVDYFAMDYWGQGASVTVSSAK -----------------------------------1------------------------ TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSDLY ------------------------2----------------------------------- TLSSSVTVTSNTWPSQSITCNVAHPASSTKVDKKIVPRD -------------------2------------------- >33H1 FAB LIGHT CHAIN; SWP:Q9YDF8; PDB:1ORSA; QIVLTQSPAIMSASLGDRVTMTCTASSSVSSSYLHWYQQKPGSSPKLWIYSTSNLASGVP ----------------------1------------------------------------- ARFSGSGSGTSYSLTISSMEAEDAATYYCHQFHRSLTFGSGTKLEIKRADAAPTVSIFPP ----------------------------1------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >Voltage-gated potassium c; SWP:Q9YDF8; PDB:1ORSB; DVQLQESGPGLVKPSQSLSLTCTVTGYSITNNYAWNWIRQFPGNKLEWMGYINYSGTTSY ---------------------1-------------------------------------- NPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYFCVRGYDYFAMDYWGQGTSVTVSSAK -----------------------------------1------------------------ TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLY ------------------------------------------------------------ TLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCG ----------------------------------------- >DIPEPTIDYL PEPTIDASE IV; SWP:P22411; PDB:1ORVA; SRRTYTLTDYLKSTFRVKFYTLQWISDHEYLYKQENNILLFNAEYGNSSIFLENSTFDEL ------------------------------------------------------------ GYSTNDYSVSPDRQFILFEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWITWS ------------------------------------------------------------ PVGHKLAYVWNNDIYVKNEPNLSSQRITWTGKENVIYNGVTDWVYEEEVFSAYSALWWSP ------------------------------------------------------------ NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRIPYPKAGAENPTVKFFVVDTRTLSP ------------------------------------------------------------ NASVTSYQIVPPASVLIGDHYLCGVTWVTEERISLQWIRRAQNYSIIDICDYDESTGRWI ------------------------------------------------------------ SSVARQHIEISTTGWVGRFRPAEPHFTSDGNSFYKIISNEEGYKHICHFQTDKSNCTFIT ----------------------------------------------1--------1---- KGAWEVIGIEALTSDYLYYISNEHKGMPGGRNLYRIQLNDYTKVTCLSCELNPERCQYYS ---------------------------------------------2--2------3---- ASFSNKAKYYQLRCFGPGLPLYTLHSSSSDKELRVLEDNSALDKMLQDVQMPSKKLDVIN -------------3---------------------------------------------- LHGTKFWYQMILPPHFDKSKKYPLLIEVYAGPCSQKVDTVFRLSWATYLASTENIIVASF ------------------------------------------------------------ DGRGSGYQGDKIMHAINRRLGTFEVEDQIEATRQFSKMGFVDDKRIAIWGWSYGGYVTSM ------------------------------------------------------------ VLGAGSGVFKCGIAVAPVSKWEYYDSVYTERYMGLPTPEDNLDYYRNSTVMSRAENFKQV ----------4------------------------------------------------- EYLLIHGTADDNVHFQQSAQLSKALVDAGVDFQTMWYTDEDHGIASNMAHQHIYTHMSHF ------------------------------------------------------------ LKQCFSLP ---4---- >TRYPSIN; SWP:P00775; PDB:1OS8A; VVGGTRAAQGEFPFMVRLSMGCGGALYAQDIVLTAAHCVSSN ---------------------1---------------1---- >HYPOTHETICAL PROTEIN MERP; SWP:Q5NUU9; PDB:1OSDA; ATQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKA -------------1--1------------------------------------------- TADAGYPSSVKQ ------------ >Ig gamma-2B chain C regio; SWP:GCBM_MOUSE; PDB:1OSPH; EVQLQESGPSLVKPSQTLSLTCSVTGEPITSGFWDWIRKFPGNKLEFMGYIRYGGGTYYN ---------------------1-------------------------------------- PSLKSPISITRDTSKNHYYLQLNSVVTEDTATYYCARSRDYYGSSGFAFWGEGTLVTVSA ----------------------------------1------------------------- AKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSG --------------------------2--------------------------------- LYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLE ---------------------2---------------- >Igk-C protein; SWP:Q58EV6; PDB:1OTSC; VRLLESGGGLVQPGGSLKLSCAASGFDYSRYWMSWVRQAPGKGLKWIGEINPVSSTINYT --------------------1--------------------------------------- PSLKDKFIISRDNAKDTLYLQISKVRSEDTALYYCARLYYGYGYWYFDVWGAGTTVTVSS ----------------------------------1------------------------- AKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLAAGVHTFPAVLQAA --------------------------2--------------------------------- LYTLSSSVTVPSSSWPSETVTCNVAHPASSTKVDKKIVPRA ---------------------2------------------- >NUCLEASE; SWP:Q8DCA6; PDB:1OUOA; APPSSFSAAKQQAVKIYQDHPISFYCGCDIEWQGKKGIPNLETCGYQVRKQQTRASRIEW -------------------------1-2---------------2---------------- EHVVPAWQFGHHRQCWQKGGRKNCSKNDQQFRLEADLHNLTPAIGEVNGDRSNFNFSQWN --------------3--------3------------------------------------ GVDGVSYGRCEQVNFKQRKVPPDRARGSIARTYLYSQEYGFQLSKQQQQLQAWNKSYPVD ---------1-------------------------------------------------- EWECTRDDRIAKIQGNHNPFVQQSC ---4--------------------4 >CONSERVED HYPOTHETICAL SE; SWP:O25728; PDB:1OUVA; DPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASF ----------------------------1-------1----------------------- YAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGK ----2-------2---------------------------3-------3----------- VVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPG ----------------4-------4---------------------------5------- CFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIEN 5---------------------------6-------6----------------------- FKKGCKLGAKGACDILKQLKIKVHH ----7-------7------------ >PHEROMONE BINDING PROTEIN; SWP:Q8MTC1; PDB:1OW4A; SSTQSYKDAMGPLVRECMGSVSATEDDFKTVLNRNPLESRTAQCLLACALDKVGLISPEG ----------------1--------------------------2---1------------ AIYTGDDLMPVMNRLYGFNDFKTVMKAKAVNDCANQVNGAYPDRCDLIKNFTDCVRNSY --------------------------------3-----------2--------3----- >SIGNAL PROCESSING PROTEIN; SWP:P30922; PDB:1OWQA; YKLICYYTSWSQYREGDGSCFPDAIDPFLCTHVIYSFANISNNEIDTWEWNDVTLYDTLN ----1------------------------1------------------------------ TLKNRNPNLKTLLSVGGWNFGSERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLY ------------------------------------------------------------ PGWRDKRHLTTLVKEMKAEFVREAQAGTEQLLLSAAVPAGKIAIDRGYDIAQISRHLDFI ------------------------------------------------------------ SLLTYDFHGGWRGTVGHHSPLFRGNSDGSSRFSNADYAVSYMLRLGAPANKLVMGIPTFG ------------------------------------------------------------ RSYTLASSKTDVGAPISGPGIPGQFTKEKGTLAYYEICDFLHGATTHRFRDQQVPYATKG -------------------------------------2---------------------- NQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDDFRGTFCGQNLTFPLTSAIKDVLAR -----------------------------------------2------------------ V - >Phospholipase A2 isoform ; SWP:Q5G290; PDB:1OWSB; NIKQFNNMIECTVPARSWWDFADYGCYCGSGSGSPTDDLDRCCQTHDNCYGAGGGSTGCA ----------1--------------2-3-------------43-----5---------6- PKSRTYTYQCSQGTLTCSGENSACAATTCDCDRLAAICFAGAPYNDTNYNIDLKSRCQ ---------1------7------6----7-5------4------------------2- >Wound-induced proteinase ; SWP:P05119; PDB:1OYVI; KACTRECGNLGFGICPRSEGSPLNPICINCCSGYKGCNYYNSFGKFICEGESDPKRPNAC --1---2-------3-----------4--56-----7----------5-----------6 TFNCDPNIAYSRCGCTTCCTGYKGCYYFGKDGKFVCEGESDEPK ---4--------7-2--81-----3----------8-------- >PHOSPHOLIPASE A2; SWP:Q7T3S7; PDB:1OZ6A; NLYQFGRMIWNRTGKLPILSYGSYGCYCGWGGQGPPKDATDRCCLVHDCCYTRVGDCSPK -------------------------1-2--------------32----45------6--- MTLYSYRFENGDIICDNKDPCKRAVCECDREAAICLGENVNTYDKKYKSYEDCTEEVQEC --------------7-----6----7-5------3-----------------1------4 >ECHICETIN A-CHAIN; SWP:Q7T248; PDB:1OZ7A; MCPPGWSSNGVYCYMLFKEPKTWDEAEKFCNKQGKDGHLLSIESKKEEILVDIVVSENIG -1----------1----------------2------------------------------ KMYKIWTGLSERSKEQHCSSRWSDGSFFRSYEIAIRYSECFVLEKQSVFRTWVATPCENT ---------------------------------------3----------------3--- FPFMCKYPVPR ----2------ >ECHICETIN A-CHAIN; SWP:NA; PDB:1OZ7B; NCLPDWSVYEGYCYKVFKERMNWADAEKFCTKQHKDGHLVSFRNSKEVDFVISLAFPMLK -1----------1----------------2------------------------------ NDLVWIGLTDYWRDCNWEWSDGAQLDYKAWDNERHCFIYKNTDNQWTRRDCTWTFSFVCK -----------------------------------3--------------3-------2- CPA --- >RETICULON 4 RECEPTOR; SWP:Q9BZR6; PDB:1OZNA; PCPGACVCYNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTI -1---2-1---------2------------------------------------------ LWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQEL ------------------------------------------------------------ GPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLD ------------------------------------------------------------ RLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD ----------------------------------------------------------3- CRARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGC 4--------------------3---------------------4 >PHOSPHOLIPASE A2; SWP:NA; PDB:1OZYA; NLLQFRKMIKCTIPGIEPLLAFSNYGCYCGKGGSGTPVDELDRCCQTHDYCYDKAKIHPE ----------1-----------------2--------------32-----4--------- CRGILSGPSFNTYAYDCTDGKLTCNDQKDKCKLFICNCDRTAAMCFAKAPYKEENNRIDA 5---------------1------6------5----6-4------3--------------- S - >DEFENSIN ARD1; SWP:P84156; PDB:1OZZA; DKLIGSCVWGAVNYTSNCNAECKRRGYKGGHCGSFANVNCWCET ------1----------2---3---------1-------2-3-- >CHOLINESTERASE; SWP:P06276; PDB:1P0IA; IIIATKNGKVRGMQLTVFGGTVTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYAN ------------------------------------------------------------ SCCQNIDQSFPGFHGSEMWNPNTDLSEDCLYLNVWIPAPKPKNATVLIWIYGGGFQTGTS -1--------------------------1------------------------------- SLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIA ------------------------------------------------------------ AFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFNAPWAVTSLYEARNRT ------------------------------------------------------------ LNLAKLTGCSRENETEIIKCLRNKDPQEILLNEAFVVPYGTPLSVNFGPTVDGDFLTDMP --------2----------2---------------------------------------- DILLELGQFKKTQILVGVNKDEGTAFLVYGAPGFSKDNNSIITRKEFQEGLKIFFPGVSE ------------------------------------------------------------ FGKESILFHYTDWVQRPENYREALGDVVGDYNFICPALEFTKKFSEWGNNAFFYYFEHRS ----------------------------------3------------------------- SKLPWPEWMGVMHGYEIEFVFGLPLERRDYTKAEEILSRSIVKRWANFAKYGNPQETQNQ ------------------------------------------------------------ STSWPVFKSTEQKYLTLNTESTRIMTKLRAQQCRFWTSFFPKV --------------------------------3---------- >LIGHT CHAIN ANTI-LYSOZYME; SWP:P00698; PDB:1P2CA; DIELTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYTSQSMSGIPS ----------------------1------------------------------------- RFSGSGSGTDFTLSINSVETEDFGVYFCQQSGSWPRTFGGGTKLDIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRN -------------2------------------ >Lysozyme C [Precursor]; SWP:P00698; PDB:1P2CB; EVQLQESGAELMKPGASVKISCKATGYTFTTYWIEWIKQRPGHSLEWIGEILPGSDSTYY ---------------------1-------------------------------------- NEKVKGKVTFTADASSNTAYMQLSSLTSEDSAVYYCARGDGFYVYWGQGTTLTVSSASTT -----------------------------------1------------------------ PPSVYPLAPGSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTV ----------------2------------------------------------------- PSSPWPSETVTCNVAHPASSTKVDKKIVPR -----------2------------------ >GLUTAMYL-ENDOPEPTIDASE; SWP:Q9EXR9; PDB:1P3CA; VVIGDDGRTKVANTRVAPYNSIAYITFGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAK -------------------------------1---------------1------------ GSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTNIGNTVGYRSIRQVT ------------------------------------------------------------ NLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTREDTNLAYYTIDTFSGNSGSAMLDQNQ ------------------------------------------------------------ QIVGVHNAGYSNGTINGGPKATAAFVEFINYAKAQ ----------------------------------- >ANTIBODY VARIABLE LIGHT C; SWP:NA; PDB:1P4BH; DVQLQQSGPGLVAPSQSLSITCTVSGFSLTDYGVNWVRQSPGKGLEWLGVIWGDGITDYN ---------------------1-------------------------------------- SALKSRLSVTKDNSKSQVFLKMNSLQSGDSARYYCVTGLFDYWGQGTTLTVS ----------------------------------1----------------- >Killer cell lectin-like r; SWP:Q64329; PDB:1P4LD; RGVKYWFCYSTKCYYFIMNKTTWSGCKANCQHYGVPILKIEDEDELKFLQRHVIPGNYWI -------1----1------------2---3------------------------------ GLSYDKKKKEWAWIDNGPSKLDMKIKKMNFKSRGCVFLSKARIEDIDCNIPYYCICGKKL ----------------------------------4------------4-----2-3---- DK -- >CHAPERONE PROTEIN CAF1M; SWP:P26926; PDB:1P5UA; SKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENKEPFVVTPPLFRLDAK ------------------------------------------------------------ QQNSLRIAQAGGVFPRDKESLKWLCVKGIPPKDPDKDVGVFVQFAINNCIKLLVRPNELK ------------------------1-----------------------1----------- GTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLPKGL ------------------------------------------------------------ AGARNVSWRIINDQGGLDRLYSKNVT -------------------------- >CHAPERONE PROTEIN CAF1M; SWP:P26926; PDB:1P5VA; FASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDPFVVTPPLFRLDAKQQ ------------------------------------------------------------ NSLRIAQAGGVFPRDKESLKWLCVKGIPKDVGVFVQFAINNCIKLLVRPNELKGTPIQFA ----------------------1------------------1------------------ ENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLPNVSWRIINDQ ------------------------------------------------------------ GGLDRLYSKNV ----------- >RAC-BETA SERINE/THREONINE; SWP:P31751; PDB:1P6SA; MNEVSVIKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPEAPDQTLPPLNNFSVAEC -----------------------------------------------------------1 QLMKTERPRPNTFVIRCLQWTTVIERTFHVDSPDEREEWMRAIQMVANSLK ----------------1---------------------------------- >ANTIBODY LIGHT CHAIN FAB; SWP:NA; PDB:1P7KA; ELQMTQSPASLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQLLVYNAKTLAEGVPS ----------------------1------------------------------------- RFSGSGSGTQFSLKINSLQPEDFGSYYCQHHYGTPLTFGAGTKLELKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >PHOSPHOLIPASE A2; SWP:NA; PDB:1P7OA; NLLQFRNMIKCTIPGREPLLAFSNYGCYCGKGGSGTPVDELDRCCQTHDNCYDKAEKLPE ----------1---------------2-3--------------43-----5--------- CKGILSGPYFNTYSYDCTDGKLTCNDQNDKCKLFICNCDRTAAMCFAKAPYNEAYNHFNR 6---------------1------7------6----7-5------4--------------- QLCK --2- >PEA ALBUMIN 1, SUBUNIT B; SWP:P08687; PDB:1P8BA; ASCNGVCSPFEMPPCGTSACRCIPVGLVIGYCRNPSG --1---2-------3----1-2---------3----- >FURIN PRECURSOR; SWP:P23188; PDB:1P8JA; VYQEPTDPKFPQQWYLSGVTQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD ------------------------------------------------------------ PGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLD ------------------------------------------1----------------- GEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSI ------------------------------------------------------------ FVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNE --------------2-----------------------------2--------------- KQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNA -----------1------------------------------------------------ DDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIVEILVEPKDIGKRLEVR -----------------------------------------3------------------ KAVTACLGEPNHITRLEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAARPHDYSADGF -----3------------------------------------------------------ NDWAFMTTHSWDEDPAGEWVLEIENTSEANNYGTLTKFTLVLYGTAPEGL -------------------------------------------------- >Platelet glycoprotein Ib ; SWP:P07359; PDB:1P9AG; HPICEVSKVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQL ---1------------1------------------------------------------- NLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGAL ------------------------------------------------------------ RGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQ ------------------------------------------------------------ ENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEILYFRRWLQDNAENVYVWKQGVDVKAMT ----------------------------2-3----------------------------- SNVASVQCDNSDKFPVYKYPGKGCPT -------2---------------3-- >chimera of Epidermal grow; SWP:P01135; PDB:1P9JA; VVSHFNDCPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRDLKWWEL -------1-------2-----1----------2-3--------3---------- >PEROXIDASE; SWP:P80679; PDB:1PA2A; MQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTG -----------1--------------------------------2----2---------- SIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTV -------------------------------1-----3---------------------- LLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVF --------------------------------------------------------4--- NNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSN ----------------------------4------------------------------- DGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDC -----------------------------------------------------------3 KKVNGS ------ >CYCLODEXTRIN GLUCANOTRANS; SWP:P05618; PDB:1PAMA; APDTSVSNKQNFSTDVIYQIFTDRFSDGNPANNPTGAAFDGSCTNLRLYCGGDWQGIINK ------------------------------------------1------1---------- INDGYLTGMGITAIWISQPVENIYSVINYSGVNNTAYHGYWARDFKKTNPAYGTMQDFKN ------------------------------------------------------------ LIDTAHAHNIKVIIDFAPNHTSPASSDDPSFAENGRLYDNGNLLGGYTNDTQNLFHHYGG ------------------------------------------------------------ TDFSTIENGIYKNLYDLADLNHNNSSVDVYLKDAIKMWLDLGVDGIRVDAVKHMPFGWQK ------------------------------------------------------------ SFMATINNYKPVFTFGEWFLGVNEISPEYHQFANESGMSLLDFRFAQKARQVFRDNTDNM ------------------------------------------------------------ YGLKAMLEGSEVDYAQVNDQVTFIDNHDMERFHTSNGDRRKLEQALAFTLTSRGVPAIYY ------------------------------------------------------------ GSEQYMSGGNDPDNRARLPSFSTTTTAYQVIQKLAPLRKSNPAIAYGSTHERWINNDVII ------------------------------------------------------------ YERKFGNNVAVVAINRNMNTPASITGLVTSLPRGSYNDVLGGILNGNTLTVGAGGAASNF ------------------------------------------------------------ TLAPGGTAVWQYTTDATTPIIGNVGPMMAKPGVTITIDGRGFGSGKGTVYFGTTAVTGAD ------------------------------------------------------------ IVAWEDTQIQVKIPAVPGGIYDIRVANAAGAASNIYDNFEVLTGDQVTVRFVINNATTAL ------------------------------------------------------------ GQNVFLTGNVSELGNWDPNNAIGPMYNQVVYQYPTWYYDVSVPAGQTIEFKFLKKQGSTV ------------------------------------------------------------ TWEGGANRTFTTPTSGTATVNVNWQP -------------------------- >N-METHYL-D-ASPARTATE RECE; SWP:P35439; PDB:1PB7A; TRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNHTVPQCCYGFCIDLL ------------------------1---------------2---------12-------- IKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNER ------------------------------------------------------------ AQYIEFSKPFKYQGLTILVKKGTRITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL ------------------------------------------------------------ STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG --------------------------------------------3--------------- IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDS --------------------------------------3-- >BOWMAN-BIRK PROTEINASE IN; SWP:P56679; PDB:1PBIA; KSACCDTCLCTKSNPPTCRCVDVGETCHSACLSCICAYSNPPKCQCFDTQKFCYKQCHNS ---12--3-4-------4-2------5---6--5-7-------7-6------3---1--- ELEEVIKN -------- >PEC-60; SWP:P37109; PDB:1PCE; EKQVFSRMPICEHMTESPDCSRIYDPVCGTDGVTYESECKLCLARIENKQDIQIVKDGEC ----------1--------2-------3----------2--1-----------------3 >OSMOTIN; SWP:P14170; PDB:1PCVA; ATIEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARVWGRTNCNFNAAGRGT --------1-----------------------------------------2--------- CQTGDCGGVLQCTGWGKPPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKC 2----3-----3-----------------------------------------------4 HAIHCTANINGECPRELRVPGGCNNPCTTFGGQQYCCTQGPCGPTFFSKFFKQRCPDAYS ----5-------6---------6---7--------78----8------------5----- YPQDDPTSTFTCPGGSTNYRVIFCP -----------4-----------1- >PLATELET-DERIVED GROWTH F; SWP:P01127; PDB:1PDGA; EPAMIAECKTRTEVFEISRFLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLRPVQVRKIEI -------1-----------------------2---3------1----------------- VRKKPIFKKATVTLEDHLACKCETVAA -------------------2-3----- >CHAPERONE PROTEIN PAPD; SWP:P42190; PDB:1PDKB; LLDRPCHVSGDSLNKHVVFKTRASRDFWYPPGRSPTESFVIRLENCHATAVGKIVTLTFK -----1---------------------------------------1-------------- GTEEAALPGHLKVTGVNAGRLGIALLDTDGSSLLKPGTSHNKGQGEKVTGNSLELPFGAY ------------------------------------------------------------ VVATPEALRTKSVVPGDYEATATFELTYR ----------------------------- >PECTATE LYASE A; SWP:P29155; PDB:1PE9A; AELVSDKALESAPTVGWASQNGFTTGGAAATSDNIYIVTNISEFTSALSAGAEAKIIQIK ------------------------------------------------------------ GTIDISGGTPYTDFADQKARSQINIPANTTVIGLGTDAKFINGSLIIDGTDGTNNVIIRN ------------------------------------------------------------ VYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETY ------------------------------------------------------------ VQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTE ------------------------------------------------------------ RAPRVRYGSIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANLSASKACKV ---------------------------------------------------------1-- VKKFNGSIFSDNGSVLNGSAVDLSGCGFSAYTSKIPYIYDVQPMTTELAQSITDNAGSGK -------------------------1---------------------------------- L - >Ribonucleoside-diphosphat; SWP:Q08698; PDB:1PEQA; RVMQETMDYHALNAMLNLYDKAGHIQFDKDQQAIDAFFATHVRPHSVTFASQHERLGTLV ------------------------------------------------------------ REGYYDDAVLARYDRAFVLRLFEHAHASGFRFQTFLGAWKFYTSYTLKTFDGKRYLEHFE ------------------------------------------------------------ DRVTMVALTLAQGDETLATQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNM --------------------------------------------------1--------- ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQ ------------------------------------------------------------ GAGAVYLHAHHPDILRFLDTKRIKTLSLGVVIPDITFRLAKENAQMALFSPYDIQRRYGK ------------------------------------------------------------ PFGDIAISERYDELIADPHVRKTYINARDFFQTLAEIQFESGYPYIMFEDTVNRANPIAG ------------------------------------------------------------ RINMSNLCSEILQVNSASRYDDNLDYTHIGHDISCNLGSLNIAHVMDSPDIGRTVETAIR ----------------------------------1------------------------- GLTAVSDMSHIRSVPSIAAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYT ------------------------------------------------------------ ITWHAVHTSMRLARERGKTFAGFAQSRYASGDYFTQYLQDDWQPKTAKVRALFARSGITL ------------------------------------------------------------ PTREMWLKLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKIEIRKEGKTGRV ------------------------------------------------------------ YYPAPFMTNENLDMYQDAYDIGPEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQ ------------------------------------------------------------ IYAWRKGIKSLYYIRLRQL ------------------- >COLLAGENASE-3; SWP:P45452; PDB:1PEX; TPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYE ----1------------------------------------------------------- HPSHDLIFIFRGRKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG ------------------------------------------------------------ NQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFNGPIQFEYSIWSNRI ------------------------------------------------------------ VRVMPANSILWC -----------1 >DIPEPTIDYL PEPTIDASE IV S; SWP:P27487; PDB:1PFQA; SRKTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEF ------------------------------------------------------------ GHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWS ------------------------------------------------------------ PVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP ------------------------------------------------------------ NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSS ------------------------------------------------------------ VTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWN -------------------------------------------------1---------- CLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFIT 1---------------------------------------------2--------2---- KGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYS ---------------------------------------------3--3------4---- VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFII -------------4---------------------------------------------- LNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASF ------------------------------------------------------------ DGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSM ------------------------------------------------------------ VLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQV ----------5------------------------------------------------- EYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHF ------------------------------------------------------------ IKQCFSLP ---5---- >Coagulation factor IX; SWP:P00741; PDB:1PFXL; YNSGKLFVRGNLRCIKCSFARVFNTKTNFWKQYVDGDQCEPNPCLNGGLCKDINSYECWC -------------1--1---------------------2----3-----2-------3-4 QVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPFPCG --------4-----5------6---5---------6-7------------7--------- RVSVSHSPTTLTR ------------- >PEPTIDE-N(4)-(N-ACETYL-BE; SWP:P21163; PDB:1PGS; DNTVNIKTFDKVKNAFGDGLSQSAEGTFTFPADVTTVKTIKMFIKNECPNKTCDEWDRYA -----------------------------------------------1----1------- NVYVKNKTTGEWYEIGRFITPYWVGTEKLPRGLEIDVTDFKSLLSGNTELKIYTETWLAK ------------------------------------------------------------ GREYSVDFDIVYGTPDYKYSAVVPVIQYNKSSIDGVPYGKAHTLGLKKNIQLPTNTEKAY ------------------------------------------------------------ LRTTISGWGHAKPYDAGSRGCAEWCFRTHTIAINNANTFQHQLGALGCSANPINNQSPGN --------------------2---2----------------------3------------ WTPDRAGWCPGMAVPTRIDVLNNSLTGSTFSYEYKFQSWTNNGTNGDAFYAISSFVIAKS --------3--------------------------------------------------- NTPISAPVVTN ----------- >ACTIN INTERACTING PROTEIN; SWP:P46680; PDB:1PGUA; SSISLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTG ------------------------------------------------------------ HGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISD ------------------------------------------------------------ ISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPRSTVGDDG ----------1---------------------------------1--------------- SVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLK ------------------------------------------------------------ YIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVG ------------------------------------------------------------ VVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIEWSS ------------------------------------------------------------ SSHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTN ------------------------------------------------------------ DDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKT ------------------------------------------------------------ PLRAKPSYISISPSETYIAAGDVGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEEIE ------------------------------------------------------------ EDLVATGSLDTNIFIYSVKRPKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWNVV ------------------------------------------------------------ >BOWMAN-BIRK INHIBITOR (PI; SWP:P01064; PDB:1PI2; YSKPCCDLCMCTRSMPPQCSCEDRINSCHSDCKSCMCTRSQPGQCRCLDTNDFCYKPCKS ----12--3-4-------4-2------5---6--5-7-------7-6------3---1-- R - >PALMITOYL-PROTEIN THIOEST; SWP:Q9UMR5; PDB:1PJAA; SYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAV ------------------------------------------------------------ VPIMAKAPQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFP --------------1-------1------------------------------------- TSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNF ----------2----------2-------------------------------------- LRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIV ------------------------------------------------------------ RCPMAGISHTAWHSNRTLYETCIEPWLS -3-------------------3------ >WOUND-INDUCED PROTEINASE ; SWP:P05119; PDB:1PJUA; ACTRECGNLGFGICPRSEGSPLNPICINCCSGYKGCNYYNSFGKFICEGESDPKRPNACT -1---2-------3-----------4--56-----7----------5-----------6- FNCDPNIAYSRCPRSQGKSLIYPTGCTTCCTGYKGCYYFGKDGKFVCEGESDEPK --4--------7-------------2--81-----3----------8-------- >COBATOXIN 1; SWP:O46028; PDB:1PJVA; AVCVYRTCDKDCKRRGYRSGKCINNACKCYPY --1----2---3---------1----2-3--- >ENVELOPE PROTEIN; SWP:Q9J0X3; PDB:1PJWA; DKLALKGTTYGMCTEKFSFAKNPADTGHGTVVIELSYSGSDGPCKIPIVSVASLNDMTPV ------------1------------------------------1---------------- GRLVTVNPFVATSSANSKVLVEMEPPFGDSYIVVGMGDKQINHHWHKAGST --------------------------------------------------- >TISSUE-TYPE PLASMINOGEN A; SWP:P00750; PDB:1PK2; SEGNSDCYFGNGSAYRGTHSLTESGASCLPWNSMILIGKVYTAQNPSAQALGLGKHNYCR ------1--------------------2------------------------------3- NPDGDAKPWCHVLKNRRLTWEYCDVPSCST ---------2------------3----1-- >COMPLEMENT C1Q SUBCOMPONE; SWP:P02745; PDB:1PK6A; QPRPAFSAIRRNPPMGGNVVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWEI ------------------------------------------------------------ CLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIYQGSE 1-----------------1----------------------------------------- ADSVFSGFLIFPS ------------- >Complement C1q subcompone; SWP:P02746; PDB:1PK6B; TQKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRG ------------------------------------------------------------ NLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGA --1----------------1---------------------------------------- NSIFSGFLLFPD ------------ >Complement C1q subcompone; SWP:P02747; PDB:1PK6C; KFQSVFTVTRQTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHASHTA ------------------------------------------------------------ NLCVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQGSDSV --1-------------1------------------------------------------- FSGFLLFPD --------- >MYELIN OLIGODENDROCYTE GL; SWP:Q63345; PDB:1PKOA; GQFRVIGPGHPIRALVGDEAELPCRISPGKNATGEVGWYRSSRVVHLYRNGKDQDAEQAP -----------------------1------------------------------------ EYRGRTELLKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVEDPFYWIN ----------------------------------1------------------------- PGR --- >CELLOBIOSE DEHYDROGENASE; SWP:Q01738; PDB:1PL3A; SASQFTDPTTGFQFTGITDPVHDVTYGFVFPPLATSGAQSTEFIGEVVAPIASKWIGIAL ------------------------------------------------------------ GGAHNNDLLLVAWANGNQIVSSTRWATGYVQPTAYTGTATLTTLPETTINSTHWKWVFRC -----------------------------------------------------------1 QGCTEWNNGGGIDVTSQGVLAWAFSNVAVDDPSDPQSTFSEHTDFGFFGIDYSTAHSANY --1--------------------------------------------------------- QNYLN ----- >PLATELET FACTOR 4; SWP:P30035; PDB:1PLFA; LQCVCLKTTSGINPRHISSLEVIGAGLHCPSPQLIATLKTGRKICLDQQNPLYKKIIKRL --1-2-----------------------1---------------2--------------- LKS --- >Ig gamma-2A chain C regio; SWP:GCAM_MOUSE; PDB:1PLGH; QIQLQQSGPELVRPGASVKISCKASGYTFTDYYIHWVKQRPGEGLEWIGWIYPGSGNTKY ---------------------1-------------------------------------- NEKFKGKATLTVDTSSSTAYMQLSSLTSEDSAVYFCARGGKFAMDYWGQGTSVTVSSAKT -----------------------------------1------------------------ TAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYT -----------------------2------------------------------------ LSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIE ------------------2---------------- >Nitrophorin-2 [Precursor]; SWP:Q26241; PDB:1PM1X; MDCSTNISPKQGLDKAKYFSGKWYVTHFLDKDPQVTDQYCSSFTPRESDGTVKEALYHYN --1------------------------------------2-------------------- ANKKTSFYNIGEGKLESSGLQYTAKYKTVDKKKAVLKEADEKNSYTLTVLEADDSSALVH ------------------------------------------------------------ ICVREGSKDLGDVYTVLTHQKDAEPSAKVKSAVTQAGLQLSQFVGTKDLGCQYDDQFTSL -1------------------------------------------------2--------- >YPM; SWP:Q57221; PDB:1PM4A; IPNIATYTGTIQGKGEVCIIGNKEGKTRGGELYAVLHSTNVNADMTLILLRNVGGNGWGE -----------------1------------------------------------------ IKRNDIDKPLKYEDYYTSGLSWIWKIKNNSSETSNYSLDATVHDDKEDSDVLTKCPV ------------------------------------------------------1-- >SCORPION TOXIN; SWP:P31719; PDB:1PNH; TVCNLRRCQLSCRSLGLLGKCIGVKCECVKH --1----2---3--------1----2-3--- >PHOSPHOLIPASE A2; SWP:P00598; PDB:1POA; NLYQFKNMIQCTVPSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKISGC ----------1--------------2-3--------------43-----5---------6 WPYFKTYSYECSQGTLTCKGGNNACAAAVCDCDRLAAICFAGAPYNDNDYNINLKARC ----------1------7------6----7-5------4------------------2 >PHOSPHOLIPASE A2; SWP:P00630; PDB:1POC; IIYPGTLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLS --------1--------------------21-----3----------------------- CDCDDKFYDCLKNSADTISSYFVGKMYFNLIDTKCYKLEHPVTGCGERTEGRCLHYTVDK 4-3------2------------------------4---------5-------5------- SKPKVYQWFDLRKY -------------- >Phospholipase A2 [Precurs; SWP:P00624; PDB:1PP2R; SLVQFETLIMKIAGRSGLLWYSAYGCYCGWGGHGLPQDATDRCCFVHDCCYGKATDCNPK -------------------------1-2--------------32----45------6--- TVSYTYSEENGEIICGGDDPCGTQICECDKAAAICFRDNIPSYDNKYWLFPPKDCREEPE --------------7-----6----7-5------3-------------------1----- PC -4 >Ubiquinol-cytochrome c re; SWP:P00126; PDB:1PPJH; LVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSQTEEDCTEELLDFLHARDHCVAHK -----------1---------------2-------------2-------------1---- LFNSLK ------ >PROTEASE OMEGA; SWP:P10056; PDB:1PPO; LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRS ---------------------1---------------------------------2---- HGCKGGYPPYALEYVAKNGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGN --1-------------------------------2------------------------- LLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDHAVTAVGYGKSGGKGYILIKNS --------------------------------3--------------------------- WGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTKN -----------------------3------------ >TRYPSIN; SWP:P35049; PDB:1PQ7A; IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSR -------------------------1---------------1------------------ TSGGITSSLSSVRVHPSYSGNNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATV ------------------------------------------------------------ AGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAITNQMFCAGVSSGGKDSCQGDS -----------------------------2--------------2----------3---- GGPIVDSSNTLIGAVSWGNGCARPNYSGVYASVGALRSFIDTYA --------------------3----------------------- >MCMV M144; SWP:Q69G19; PDB:1PQZA; GSESGLRYAYTLVVDGTANTARCFGTGHVDGEAFVGYSNNKTHGIGRWVNASHVEEENKE ----------------------1------------------------------------- FVRQCKELQAELDKMQNNSAVIGVKTVQLDVGCTSKIEKHYAYDGNETEDDTATSASERA ----1---------------------------2--------------------------- RDCQKKLTEYRKLVLASAVSPQLEVERRSSGREGGMRLRCFARDYYPADLEIRWWKDDGG --2------------------------------------3-------------------- GGALPQTSKQHHDPLPSGQGLYQKHIDVYVDGGLEHVYSCRVKGIATGLELQIVRWKG ---------------------------------------3------------------ >L-XYLULOSE REDUCTASE; SWP:Q7Z4W1; PDB:1PR9A; MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVD ------------------------------------------------------------ LGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVAR ------------------------------------------------------------ GLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPT -----------------1-----------1------------------------------ VVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG ------------------------------------------------------------ FWAC ---- >PENTALENENE SYNTHASE; SWP:Q55012; PDB:1PS1A; QDVDFHIPLPGRQSPDHARAEAEQLAWPRSLGLIRSDAAAERHLRGGYADLASRFYPHAT ------------------------------------------------------------ GADLDLGVDLMSWFFLFDDLFDGPRGENPEDTKQLTDQVAAALDGPLPDTAPPIAHGFAD ------------------------------------------------------------ IWRRTCEGMTPAWCARSARHWRNYFDGYVDEAESRSAAQYLAMRRHTIGVQPTVDLAERA -----1-------1---------------------------------------------- GRFEVPHRVFDSAVMSAMLQIAVDVNLLLNDIASLEKEEARGEQNNMVMILRREHGWSKS ------------------------------------------------------------ RSVSHMQNEVRARLEQYLLLESCLPKVGEIYQLDTAEREALERYRTDAVRTVIRGSYDWH ------------------------------------------------------------ RSSG ---- >ANTIBODY; SWP:NA; PDB:1PSKH; EVQLQQSGPELVKPGASVKISCKTSGYTFTKYTMHWVKQSHGKSLEWIGDINPNNGGTNY ---------------------1-------------------------------------- NQKFKGTATLTVHKSSTTAYMELRSLTSEDSAVYYCTSKSFDYWGQGTTLTVSSAKTTAP -----------------------------------1------------------------ SVYPLAPVAVTLGCLVKGYFPEPVTLTWNSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS -------------2---------------------------------------------- QSITCNVAHPASSTKVDK ----2------------- >PSORIASIN; SWP:P31151; PDB:1PSRA; SNTQAERSIIGMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEK ---------------------------------------------1-------------- KDKNEDKKIDFSEFLSLLGDIATDYHKQSHGAAPCSGGSQ ----------------------------------1----- >2S ALBUMIN; SWP:P01089; PDB:1PSYA; AEFMESKGEREGSSSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQES -----------------1-----------2------------------------------ QQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGVRCMR -----23---------1-4----------------------------------3---4-- QTRTN ----- >KALATA B2; SWP:P58454; PDB:1PT4A; CGETCFGGTCNTPGCSCTWPICTRDGLPV 1---2----3----1-2----3------- >Leukemia inhibitory facto; SWP:P15018; PDB:1PVHB; CAIRHPCHNNLMNQIRSQLAQLNGSANALFILYYTAQGEPFPNNLDKLCGPNVTDFPPFH 1-----2-----------------------------------------3----------- ANGTEKAKLVELYRIVVYLGTSLGNITRDQKILNPSALSLHSKLNATADILRGLLSNVLC -----------------------------------------------------------2 RLCSKYHVGHVDVTYGPDTSGKDVFQKKKLGCQLLGKYKQIIAVLAQAF --1----------------------------3----------------- >XYLANASE; SWP:P81536; PDB:1PVXA; GTTPNSEGWHDGYYYSWWSDGGGDSTYTNNSGGTYEITWGNGGNLVGGKGWNPGLNARAI ------------------------------------------------------------ HFTGVYQPNGTSYLSVYGWTRNPLVEYYIVENFGSSNPSSGSTDLGTVSCDGSTYTLGQS -------------------------------------------------1---------- TRYNAPSIDGTQTFNQYWSVRQDKRSSGTVQTGCHFDAWASAGLNVTGDHYYQIVATEGY ---------------------------------1-------------------------- FSSGYARITVADVG -------------- >K+ TOXIN-LIKE PEPTIDE; SWP:NA; PDB:1PVZA; TPFAIKCATDADCSRKCPGNPPCRNGFCACT ------1-----2---3-----1----2-3- >FIBROBLAST GROWTH FACTOR-; SWP:O95750; PDB:1PWAA; PIRLRHLYTSGPHGLSSCFLRIRADGVVDCARGQSAHSLLEIKAVALRTVAIKGVHSVRY -----------------1-----------1------------------------------ LCMGADGKMQGLLQYSEEDCAFEEEIRPDGYNVYRSEKHRLPVSLSLPLSHFLPMLPMVP -2-----------------2---------------------------------------- EEP --- >PULMONARY SURFACTANT-ASSO; SWP:P35247; PDB:1PWBA; ASLRQQVEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQA --------------------------------------------------------1--- GGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPND ------------------------------------------------------------ DGGSEDCVEIFTNGKWNDRACGEKRLVVCEF ------2-------------2-------1-- >PHOSPHOLIPASE A2; SWP:NA; PDB:1PWOA; NLYQFRKMIKCTIPGREPLLAFTDYGCYCGKGGSGTPVDELDRCCQTHDNCYDKAEKLPE ----------1---------------2-3--------------43-----5--------- CKGILSGPYVNTYSYDCTDGKLTCNDQKDKCKLFICNCDRTAAMCFAKAPYIEANNHIDP 6---------------1------7------6----7-5------4--------------- NRCK --2- >MAJOR POLLEN ALLERGEN JUN; SWP:P81294; PDB:1PXZA; DNPIDSCWRGDSNWDQNRMKLADCAVGFGSSTMGGKGGDFYTVTSTDDNPVNPTPGTLRY ------1----------------1------------------------------------ GATREKALWIIFSQNMNIKLKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHS ----------------------------------------------2------------- LHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTL -----2------------------------------------------------------ GSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHV ------------------------------------------------------------ ANNNYDPWNIYAIGGSSNPTILSEGNSFTAPSESYKKEVTKRIGCESPSACANWVWRSTR --------------------------------------------3-----3--------- DAFINGAYFVSSGKTEETNIYNSNEAFKVENGNAAPQLTKNAGVVT ---------------------------------------------- >MYELIN-OLIGODENDROCYTE GL; SWP:Q61885; PDB:1PY9A; QFRVIGPGYPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQ ----------------------1------------------------------------- APEYRGRTELLKETISEGKVTLRIQNVRFSDEGGYTCFFRDHSYQEEAAMELKVED ------------------------------------1------------------- >RIBONUCLEASE; SWP:Q53752; PDB:1PYLA; DPALADVCRTKLPSQAQDTLALIAKNGPYPYNRDGVVFENRESRLPKKGNGYYHEFTVVT -------1---------------------------------------------------- PGSNDRGTRRVVTGGYGEQYWSPDHYATFQEIDPRC -----------------------------------1 >AGRIN; SWP:P31696; PDB:1PZ7A; KAAGDAEAIAFDGRTYMEYHNAVTKSAEPSEKALQSNHFELSIKTEATQGLILWSGKGLE ------------------------------------------------------------ RSDYIALAIVDGFVQMMYDLGSKPVVLRSTVPINTNHWTHIKAYRVQREGSLQVGNEAPI ------------------------------------------------------------ TGSSPLGATQLDTDGALWLGGMERLSVAHKLPKAYSTGFIGCIRDVIVDRQELHLVEDAL -----------------------------------------1------------------ NNPTILHC -------1 >SUPEROXIDE DISMUTASE [CU-; SWP:P0A608; PDB:1PZSA; QSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVA -----------------------------------------------------1------ PTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAK ------------------------------------------------------------ TAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG --------------------------------------------1------ >SUPEROXIDE DISMUTASE [CU-; SWP:P00442; PDB:1Q0EA; ATKAVCVLKGDGPVQGTIHFEAKGDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGP ------------------------------------------------------1----- HFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEK ------------------------------------------------------------ PDDLGRGGNEESTKTGNAGSRLACGVIGIAK -----------------------1------- >CATION-INDEPENDENT MANNOS; SWP:P08169; PDB:1Q25A; QGAEFPELCSYTWEAVDTKNNMLYKINICGNMGVAQCGPSSAVCMHDLKTDSFHSVGDSL --------1-------------------1-------2------2---------------- LKTASRSLLEFNTTVNCKQQNHKIQSSITFLCGKTLGTPEFVTATDCVHYFEWRTTAACK ----------------3--------------4--------------3-----------4- KNIFKANKEVPCYAFDRELKKHDLNPLIKTSGAYLVDDSDPDTSLFINVCRDIEVLRASS -----------5-------------------------------------5---------- PQVRVCPTGAAACLVRGDRAFDVGRPQEGLKLVSNDRLVLSYVKEGAGQPDFCDGHSPAV -----6------6---------------------------------------7------- TITFVCPSERREGTIPKLTAKSNCRFEIEWVTEYACHRDYLESRSCSLSSAQHDVAVDLQ -----8-----------------7-----------8---------9-------------- PLSRVEASDSLFYTSEADEYTYYLSICGGSQAPICNKKDAAVCQVKKADSTQVKVAGRPQ --------------------------9-------a-------a----------------- NLTLRYSDGDLTLIYFGGEECSSGFQRMSVINFECNQTAGNNGRGAPVFTGEVDCTYFFT --------------------b-------------c-------------------b----- WDTKYACV ------c- >EXOCELLOBIOHYDROLASE I; SWP:P00725; PDB:1Q2BA; SACTLQSETHPPLTWQKCSSGGTCTQQTGSVVIDANWRWTHATNSSTNCYDGNTWSSTLC --1--------------2-----2------------------------3----------4 PDNETCAKNCCLDGAAYASTYGVTTSGNSLSIDFVTQSAQKNVGARLYLMASDTTYQEFT -----4---31------------------------------------------------- LLGNEFSFDVDVSQLPCGLNGALYFVSMDADGGVSKYPTNTAGAKYGTGYCDSQCPRDLK ----------------5---------------------------------6---7----- FINGQANVEGWEPSSNNANTGIGGHGSCCSEMDIWEANSISEALTPHPCTTVGQEICEGC ---------------------------76-------------------8-------9--a GCGGTYSCNRYGGTCDPDGCDWNPYRLGNTSFYGPGSSFTLDTTKKLTVVTQFETSGAIN -9-----a------8----b---------------------------------------- RYYVQNGVTFQQPNAELGSYSGNELNDDYCTAEEAEFGGSSFSDKGGLTQFKKATSGGMV -----------------------------b------------------------------ LVMSLWDDYYANMLWLDSTYPTNETSSTPGAVRGSCSTSSGVPAQVESQSPNAKVTFSNI -----------------------------------5------------------------ KFGPIGSTGNPSG ------------- >NEUROTOXIN BMK37; SWP:P83407; PDB:1Q2KA; AACYSSDCRVKCVAMGFSSGKCINSKCKCYK --1----2---3---------1----2-3-- >IRON BINDING PROTEIN FBPA; SWP:Q9Z4N6; PDB:1Q35A; ANEVNVYSYRQPYLIEPMLKNFEKDTGIKVNIIFADGLVDRVKQEGELSPADVLLTVDIS ------------------------------------------------------------ RVMEIVNADLAQKIDSKVLEKNIPAQFRDSNDQWFGLTTRARVIYTSKDRVGKLPAGFDY ------------------------------------------------------------ LDLAKPEYKGKVCVRSGKNSYNVSLFAAMIEHYGIEKTKAFLEGLKANLARKPQGGDRDQ ------------1----------------------------------------------- VKAIKEGICDYSIGNSYYYGKMLDDEKQKSWAEAAIINFPSGEHGTHKNISGVVIAKHSP --------1--------------------------------------------------- NKANAVKLIEYLSGEKAQGLYAELNHEYPVKEGIEPSAIVKGWGTFKSDTIKLEDIAKNY ------------------------------------------------------------ EAALKLVDEVKFDDFSE ----------------- >ALO3; SWP:P83653; PDB:1Q3JA; CIKNGNGCQPNGSQGNCCSGYCHKQPGWVAGYCRRK 1------2--------31---2----------3--- >SEMAPHORIN 3A; SWP:O08665; PDB:1Q47A; KNNVPRLKLSYKEMLESNNVITFNGLANSSSYHTFLLDEERSRLYVGAKDHIFSFNLVNI ------------------------------------------------------------ KDFQKIVWPVSYTRRDECKWAGKDILKECANFIKVLEAYNQTHLYACGTGAFHPICTYIE -----------------1----------1-----------------2--------2---- VGHHPEDNIFKLQDSHFENGRGKSPYDPKLLTASLLIDGELYSGTAADFMGRDFAIFRTL ------------------------------------------------------------ GHHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARI ------------------------------------------------------------ GQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQDVFLMNSKDPKNPIVY ---3-----------------------4-------------------------------- GVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGPNYQWVPYQGRVPYPRPGTCPSKT ---------------4---------------------------------------3---- FGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPIMIKTDVNYQFTQIVVDRVDAEDGQ ------------------------------------------------------------ YDVMFIGTDVGTVLKVVSVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQLPLHR ------------------------------------------------------------ CDIY ---- >PROSTAGLANDIN G/H SYNTHAS; SWP:P05979; PDB:1Q4GA; PVNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIPEIWTWLRTTLRPSPSFIHF ----12---3-----1---------3-4---------4---------------------- LLTHGRWLWDFVNATFIRDTLMRLVLTVRSNLIPSPPTYNIAHDYISWESFSNVSYYTRI ------------------------------------------------------------ LPSVPRDCPTPMGTKGKKQLPDAEFLSRRFLLRRKFIPDPQGTNLMFAFFAQHFTHQFFK -------2---------------------------------------------------- TSGKMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPV ------------------------------------------------------------ LMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQT ------------------------------------------------------------ ARLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGAQFQYRNRIAMEFNQLYHWHPLM ------------------------------------------------------------ PDSFRVGPQDYSYEQFLFNTSMLVDYGVEALVDAFSRQPAGRIGGGRNIDHHILHVAVDV ------------------------------------------------------------ IKESRVLRLQPFNEYRKRFGMKPYTSFQELTGEKEMAAELEELYGDIDALEFYPGLLLEK ------------------------------------------------------------ CHPNSIFGESMIEMGAPFSLKGLLGNPICSPEYWKASTFGGEVGFNLVKTATLKKLVCLN ---------------------------------------------------------5-- TKTCPYVSFHVPD ---5--------- >PILS; SWP:Q9ZIU9; PDB:1Q5FA; MWGKKDAGTELTNYQTLATNTIGMMKGVDGYAFTSGAKMTDTLIQAGAAKGMTVSGDPAS ------------------------------------------------------------ GSATLWNSWGGQIVVAPDTAGGTGFNNGFTITTNKVPQSACVSISTGMSRSGGTSGIKIN ----------------------------------------1------------------- GNNHTDAKVTAEIASSECTADNGRTGTNTLVFNYNG -----------------1------------------ >PHOSPHOLIPASE A2 VRV-PL-V; SWP:P59071; PDB:1Q6VA; SLLEFGKMILEETGKLAIPSYSSYGCYCGGCGSGTPKDATDRCCFVHCCCYGNLPDCNPK -------------------------1-2--3-----------42---356------7--- SDRYKYKRVNGAIVCEKGTSCENRICECDKAAAICFRQNLNTYSGKYMLYPDFLCKGELK --------------8-----7----8-6------4-------------------1----- C 5 >HYPOTHETICAL PROTEIN AQ_1; SWP:O66565; PDB:1Q77A; AKVLLVLTDAYSDCEKAITYAVNFSEKLGAELDILAVLEDVYNLERANVTFGLPFPPEIK -------------1---------------------------------------------- EESKKRIERRLREVWEKLTGSTEIPGVEYRIGPLSEEVKKFVEGKGYELVVWACYPSAYL -----------------------------------------------------1------ CKVIDGLNLASLIVK --------------- >GDNF FAMILY RECEPTOR ALPH; SWP:Q62997; PDB:1Q8DA; ERPNCLSLQDSCKTNYICRSRLADFFTNCQPESRSVSNCLKENYADCLLAYSGLIGTVTP ----1------2-----2----------3---------4-------3------------- NVAPWCDCSNSGNDLEDCLKFLNFFKDNTCLKNAIQAFG -----1-5---------5-----------4--------- >Cytochrome b6-f complex i; SWP:P49728; PDB:1Q90C; QAAKDALGNDIKAGEWLKTHLAGDRSLSQGLKGDPTYLIVTADSTIEKYGLNAVCTHLGC -----------------------------------------------------------1 VVPWVAAENKFKCPCHGSQYNAEGKVVRGPAPLSLALAHCDVAEGLVTFSTWTETDFRTG --------------1--------------------------------------------- LEPWWA ------ >THIOL PEROXIDASE; SWP:Q57549; PDB:1Q98A; TVTLAGNPIEVGGHFPQVGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCAT ---------------------------------------------------------1-- SVRKFNQQAAKLSNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQLGVDIQ -------------------------------1---------------------------- TGPLAGLTSRAVIVLDEQNNVLHSQLVEEIKEEPNYEAALAVLA -------------------------------------------- >GUANYL-SPECIFIC RIBONUCLE; SWP:P00651; PDB:1Q9EA; ACDYTCGSNCYSSSDVSTAQAAGYKLHEDGETVGSNSYPHEFRNWNGFDFSVSSPYYEWP -1---2---1-------------------------------------------------- ILSSGDVYSGGSPGADRVVFNENNQLAGVITHTGASGNNFVECT ------------------------------------------2- >CELLOBIOHYDROLASE I CATAL; SWP:Q8TFL9; PDB:1Q9HA; QAGTATAENHPPLTWQECTAPGSCTTQNGAVVLDANWRWVHDVNGYTNCYTGNTWDPTYC -----------------1-----1------------------------2----------3 PDDETCAQNCALDGADYEGTYGVTSSGSSLKLNFVTGSNVGSRLYLLQDDSTYQIFKLLN -----3---2-------------------------------------------------- REFSFDVDVSNLPCGLNGALYFVAMDADGGVSKYPNNKAGAKYGTGYCDSQCPRDLKFID -------------4---------------------------------5---6-------- GEANVEGWQPSTGIGDHGSCCAEMDVWEANSISNAVTPHPCDTPGQTMCSGDDCGGTYSN -------------------65-------------------7-------8----8------ DRYAGTCDPDGCDFNPYRMGNTSFYGPGKIIDTTKPFTVVTQFLTDDGTDTGTLSEIKRF ------7----9------------------------------------------------ YIQNSNVIPQPNSDISGVTGNSITTEFCTAQKQAFGDTDDFSQHGGLAKMGAAMQQGMVL ---------------------------9-------------------------------- VMSLWDDYAAQMLWLDSDYPTDADPTTPGIARGTCPTDSGVPSDVESQSPNSYVTYSNIK ----------------------------------4------------------------- FGPINSTFT --------- >ALGINATE LYASE A1-III; SWP:Q9KWU1; PDB:1QAZA; GSHPFDQAVVKDPTASYVDVKARRTFLQSGQLDDRLKAALPKEYDCTTEATPNPQQGEMV ---------------------------------------------1-------------- IPRRYLSGNHGPVNPDYEPVVTLYRDFEKISATLGNLYVATGKPVYATCLLNMLDKWAKA ------------------------------------------------1----------- DALLNYDPKSQSWYQVEWSAATAAFALSTMMAEPNVDTAQRERVVKWLNRVARHQTSFPG ------------------------------------------------------------ GDTSCCNNHSYWRGQEATIIGVISKDDELFRWGLGRYVQAMGLINEDGSFVHEMTRHEQS ----22------------------------------------------------------ LHYQNYAMLPLTMIAETASRQGIDLYAYKENGRDIHSARKFVFAAVKNPDLIKKYASEPQ ------------------------------------------------------------ DTRAFKPGRGDLNWIEYQRARFGFADELGFMTVPIFDPRTGGSATLLAYKP --------------------------------------------------- >Heat-labile enterotoxin I; SWP:P43529; PDB:1QB5D; GASQFFKDNCNRTTASLVEGVELTKYISDINNNTDGMYVVSSTGGVWRISRAKDYPDNVM ---------1-------------------------------------------------- TAEMRKIAMAAVLSGMRVNMCASPASSPNVIWAIELEAE --------------------1------------------ >FABE8A; SWP:NA; PDB:1QBLH; EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEKGLEWIGRIDPASGNTKY ---------------------1-------------------------------------- DPKFQDKATITADTSSNTAYLQLSSLTSEDTAVYYCAGYDYGNFDYWGQGTTLTVSSAET -----------------------------------1------------------------ TPPSVYPLAPGTAALKSSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYT -----------------------2------------------------------------ LTSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPRNC ------------------2-------------------- >POKEWEED ANTIVIRAL PROTEI; SWP:P10297; PDB:1QCIA; VNTIIYNVGSTTISKYATFLNDLRNEAKDPSLKCYGIPMLPNTNTNPKYVLVELQGSNKK ---------------------------------1-------------------------- TITLMLRRNNLYVMGYSDPFETNKCRYHIFNDISGTERQDVETTLCPNANSRVSKNINFD ------------------------2--------------------2-------------- SRYPTLESKAGVKSRSQVQLGIQILDSNIGKISGVMSFTEKTEAEFLLVAIQMVSEAARF ------------------------------------------------------------ KYIENQVKTNFNRAFNPNPKVLNLQETWGKISTAIHDAKNGVLPKPLELVDASGAKWIVL ------------------------------------------------------------ RVDEIKPDVALLNYVGGSCQTT ------------------1--- >PECTIN LYASE B; SWP:Q00205; PDB:1QCXA; AGVVGAAEGFAHGVTGGGSASPVYPTTTDELVSYLGDNEPRVIILDQTFDFTGTEGTETT ------------------------------------------------------------ TGCAPWGTASQCQVAINLHSWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGV --1--------2---------1-------------------------------------- IKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIV ------------------------------------------------------------ LGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKV -------------------------2---------------------------------- QGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNVVVETPISGQLFSSPDANTN ------------------------------------------------------------ QQCASVFGRSCQLNAFGNSGSMSGSDTSIISKFAGKTIAAAHPPGAIAQWTMKNAGQGK --3-------3------------------------------------------------ >VHH-R2 ANTI-RR6 ANTIBODY; SWP:A2KD59; PDB:1QD0A; QVQLQESGGGLVQAGGSLRLSCAASGRAASGHGHYGMGWFRQVPGKEREFVAAIRWSGKE ---------------------1-------------------------------------- TWYKDSVKGRFTISRDNAKTTVYLQMNSLKGEDTAVYYCAARPVRVADISLPVGFDYWGQ --------------------------------------1--------------------- GTQVTVSS -------- >LITHOSTATHINE; SWP:P05451; PDB:1QDDA; QEAQTELPQARISCPEGTNAYRSYCYYFNEDRETWVDADLYCQNMNSGNLVSVLTQAEGA -------------1----------1----------------2------------------ FVASLIKESGTDDFNVWIGLHDPKKNRAWHWSSGSLVSYKSWGIGAPSSVNPGYCVSLTS ------------------------------------------------------3----- STGFQKWKDVPCEDKFSFVCKFKN -----------3-------2---- >ROBUSTOXIN; SWP:P01478; PDB:1QDP; CAKKRNWCGKNEDCCCPMKCIYAWYNQQGSCQTTITGLFKKC 1------2-----314---2----------3----------4 >HISTIDYL-TRNA SYNTHETASE; SWP:O32422; PDB:1QE0A; MIKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFAREMYTFKDKG ------------------------------------------------------------ DRSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYYRQFNQFGVEAIGAENPS ------------------------------------------------------------ VDAEVLAMVMHIYQSFGLKHLKLVINSVGDMASRKEYNEALVKHFEPVIHEFCSDCQSRL ----------------------------------------------------1--1---- HTDPMRILTAPRITDFLNEESKAYYEQVKAYLDDLGIPYTEDPNLVRGLDYYTHTAFELM ------------------------------------------------------------ MDNPNYDGAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLALEEEGIELDIEENL ------------------------------------------------------------ DLFIVTMGDQADRYAVKLLNHLRHNGIKADKDYLQRKIKGQMKQADRLGAKFTIVIGDQE ------------------------------------------------------------ LENNKIDVKNMTTGESETIELDALVEYFKK ------------------------------ >PURPLE ACID PHOSPHATASE; SWP:P29288; PDB:1QFCA; TAPASTLRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQIMGADFIMSLGDNFYFTGVH ------------------------------------------------------------ DANDKRFQETFEDVFSDRALRNIPWYVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRL ------------------------------------------------------------ RFKVPRSNITVAIFMLDTVMLCGNSVARTQLSWLKKQLAAAKEDYVLVAGHYPIWSIAEH ---------------------1-------------------------------------- GPTRCLVKNLRPLLAAYGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSVRHQRKV ----1------------------------------------------------------- PNGYLRFHYGSEDSLGGFTYVEIGSKEMSITYVEASGKSLFKTSLPR ----------------------------------------------- >SIALOADHESIN; SWP:Q62230; PDB:1QFOA; TWGVSSPKNVQGLSGSCLLIPCIFSYPADVPVGITAIWYYDYSGKRQVVIHSGDPKLVDK ---------------------1-------------------------------------- RFRGRAELMGNMDHKVCNLLLKDLKPEDSGTYNFRFEISSNRWLDVKGTTVTVTT ----------------1-------------------------------------- >FEMALE-SPECIFIC HISTAMINE; SWP:O77421; PDB:1QFTA; NQPDWADEAANGAHQDAWKSLKADVENVYYMVKATYKNDPVWGNDFTCVGVMANDVNEDE -----------------------------------------------1------------ KSIQAEFLFMNNADTNMQFATEKVTAVKMYGYNRENAFRYETEDGQVFTDVIAYSDDNCD ----------------------------------------------------------2- VIYVPGTDGNEEGYELWTTDYDNIPANCLNKFNEYAVGRETRDVFTSACLEIAAA ---------------------------2--------------------1------ >GONADOTROPIN ALPHA SUBUNI; SWP:NA; PDB:1QFWI; QVQLQESGGHLVKPGGSLKLSCAASGFAFSSFDMSWIRQTPEKRLEWVASITNVGTYTYY ---------------------1-------------------------------------- PGSVKGRFSISRDNARNTLNLQMSSLRSEDTALYFCARQGTAAQPYWYFDVWGAGTTVTV -----------------------------------1------------------------ S - >Ig kappa chain V-III regi; SWP:P01660; PDB:1QFWL; DIELTQSPDSLAVSLGQRATISCRASEDSYGNSFMQWYQQKPGQPPKLLIYRASNLESGI ----------------------1------------------------------------- PARFSGTGSRTDFTLTINPVEADDVATYYCQQSDEYPYMYTFGGGTKLEIKR -----------------------------1---------------------- >GONADOTROPIN ALPHA SUBUNI; SWP:NA; PDB:1QFWM; DIELTQSPKSMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPD ----------------------1------------------------------------- RFTGSGSATDFTLTISSVQAEDFADYHCGQTYNHPYTFGGGTKLEIKR ---------------------------1-------------------- >PH 2.5 ACID PHOSPHATASE; SWP:P34755; PDB:1QFXA; KQFSQEFRDGYSILKHYGGNGPYSERVSYGIARDPPTSCEVDQVIMVKRHGERYPSPSAG --------------------------------------1--------------------- KDIEEALAKVYSITEYKGDLAFLNDWTYYVPNECYYNAETTSGPYAGLLDAYNHGNDYKA ---------------------------------2-------------------------- RYGHLWNGETVVPFFSSGYGRVIETARKFGEGFFGYNYSTNAALNIISESEVMGADSLTP ------------------------------------------------------------ TCDTTTCDNLTYQLPQFKVAAARLNSQNPGMNLTASDVYNLMVMASFELNARPFSNWINA -3----4----------------------------------------------------- FTQDEWVSFGYVEDLNYYYCAGPGDKNMAAVGAVYANASLTLLNQGPKEAGSLFFNFAHD -------------------4---------------------------------------- TNITPILAALGVLIPNEDLPLDRVAFGNPYSIGNIVPMGGHLTIERLSCQATALSDEGTY ------------------------------------------------1----------- VRLVLNEAVLPFNDCTSGPGYSCPLANYTSILNKNLPDYTTTCNVSASYPQYLSFWWNYN --------------5-------5-------------------3----------------- TTTELNYRSSPIACQEGDAMD -------------2------- >PROTEIN (SPORE COAT POLYS; SWP:P39621; PDB:1QG8A; PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDNRVRFY ------------------------------------------------------------ QSDISGVKERTEKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKA ------------------------------------------------------------ VIYSASKTYHLNDIVKETVRPAAQVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESP ------------------------------1----------------------------- AFYRIGDARFFWRVNHFYPFYPLDEELDLNYITEFVRNLPPQRNCRELRESLKKLGMG --------------------------------------------1------------- >CHITOSANASE; SWP:P33673; PDB:1QGIA; ASPDDNFSPETLQFLRNNTGLDGEQWNNIMKLINKPEQDDLNWIKYYGYCEDIEDERGYT -------------------------------------------------1---------- IGLFGATTGGSRDTHPDGPDLFKAYDAAKGASNPSADGALKRLGINGKMKGSILEIKDSE ------------------------------------------------------------ KVFCGKIKKLQNDAAWRKAMWETFYNVYIRYSVEQARQRGFTSAVTIGSFVDTALNQGAT ---1-------------------------------------------------------- GGSDTLQGLLARSGSSSNEKTFMKNFHAKRTLVVDTNKYNKPPNGKNRVKQWDTLVDMGK ------------------------------------------------------------ MNLKNVDSEIAQVTDWEMK ------------------- >PEROXIDASE N; SWP:Q39034; PDB:1QGJA; QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS ----------1--------------------------------2----2----------- EKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGR ---------------------------1-----3-------------------------- KDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLF ---------------------------------------------------4-------- NFTGAGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLS -----------------------4------------------------------------ SDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNISNGASGEVRTNCRVINN ------------------------------------------------------3----- >SPLICEOSOMAL PROTEIN U5-1; SWP:P83876; PDB:1QGVA; SYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLV ------------------------------------1----------------------- DITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGINWAMEDKQEMVDIIETVYRGARKGR -----------------1------------------------------------------ GLVVSPKDYST ----------- >DNA POLYMERASE; SWP:Q56366; PDB:1QHTA; MILDTDYITENGKPVIRVFKKENGEFKIEYDRTFEPYFYALLKDDSAIEDVKKVTAKRHG ------------------------------------------------------------ TVVKVKRAEKVQKKFLGRPIEVWKLYFNHPQDVPAIRDRIRAHPAVVDIYEYDIPFAKRY ------------------------------------------------------------ LIDKGLIPMEGDEELTMLAFAIATLYHEGEEFGTGPILMISYADGSEARVITWKKIDLPY ------------------------------------------------------------ VDVVSTEKEMIKRFLRVVREKDPDVLITYNGDNFDFAYLKKRCEELGIKFTLGRDGSEPK ------------------------------------------------------------ IQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGKPKEKVYAEEIAQAWE ------------------------------------------------------------ SGEGLERVARYSMEDAKVTYELGREFFPMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRK ------------------------------------------------------------ AYKRNELAPNKPDERELARRRGGYAGGYVKEPERGLWDNIVYLDFRSLYPSIIITHNVSP ------------------------------------------------------------ DTLNREGCKEYDVAPEVGHKFCKDFPGFIPSLLGDLLEERQKIKRKMKATVDPLEKKLLD -------1-------------1-------------------------------------- YRQRAIKILANSFYGYYGYAKARWYCKECAESVTAWGREYIEMVIRELEEKFGFKVLYAD -------------------------2--2------------------------------- TDGLHATIPGADAETVKKKAKEFLKYINLELEYEGFYVRGFFVTKKKYAVIDEEGKITTR ------------------------------------------------------------ GLEIVRRDWSEIAKETQARVLEAILKHGDVEEAVRIVKEVTLVIHEQIATGPHVAVAKRL ------------------------------------------------------------ AARGVKIRPGTVISYIVLKGDRAIPADEFEYYIENQVLPAVERILKAFGY -------------------------------------------------- >VANADIUM BROMOPEROXIDASE; SWP:P81701; PDB:1QI9A; TCSTSDDADDPTPPNERDDEAFASRVAAAKRELEGTGTVCQINNGETDLAAKFHKSLPHD ------------------------------------------------------------ DLGQVDADAFAALEDCILNGDLSICEDVPVGNSEGDPVGRLVNPTAAFAIDISGPAFSAT ---------------1--------1----------------------------------- TIPPVPTLPSPELAAQLAEVYWMALARDVPFMQYGTDDITVTAAANLAGMEGFPNLDAVS ------------------------------------------------------------ IGSDGTVDPLSQLFRATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPDVNYMVDFD ------------------------------------------------------------ EWLNIQNGGPPAGPELLDDELRFVRNARDLARVTFTDNINTEAYRGALILLGLDAFNRAG ------------------------------------------------------------ VNGPFIDIDRQAGFVNFGISHYFRLIGAAELAQRSSWYQKWQVHRFARPEALGGTLHLTI ------------------------------------------------------------ KGELNADFDLSLLENAELLKRVAAINAAQNPNNEVTYLLPQAIQEGSPTHPSYPSGHATQ ------------------------------------------------------------ NGAFATVLKALIGLDRGGDCYPDPVYPDDDGLKLIDFRGSCLTFEGEINKLAVNVAFGRQ -------------------2--------------------2------------------- MLGIHYRFDGIQGLLLGETITVRTLHQELMTFAEESTFEFRLFTGEVIKLFQDGTFTIDG ------------------------------------------------------------ FKCPGLVYTGVENCV --3----------3- >PECTIN METHYLESTERASE; SWP:P07863; PDB:1QJVA; ATTYNAVVSKSSSDGKTFKTIADAIASAPAGSTPFVILIKNGVYNERLTITRNNLHLKGE ------------------------------------------------------------ SRNGAVIAAATAAGTLKSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDS ------------------------------------------------------------ DSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGD -----------------------------------------------1------------ GTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESDSVPAKSYG -------1---------------------------------------------------- LGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHIYGWDKMSGKDKNGNTIWFNPEDSR ------------------------------------------------------------ FFEYKSYGAGAAVSKDRRQLTDAQAAEYTQSKVLGDWTPTLP ------------------------------------------ >CELLOBIOHYDROLASE CEL6A (; SWP:P07987; PDB:1QJWA; ATYSGNPFVGVTPWANAYYASEVSSLAIPSLTGAMATAAAAVAKVPSFMWLDTLDKTPLM ------------------------------------------------------------ EQTLADIRTANKNGGNYAGQFVVFDLPDRDCAALASNGEYSIADGGVAKYKNYIDTIRQI ------------------------------1----------------------------- VVEYSDIRTLLVIEPDSLANLVTNLGTPKCANAQSAYLECINYAVTQLNLPNVAMYLDAG -----------------------------1------------------------------ HAGWLGWPANQDPAAQLFANVYKNASSPRALRGLATNVANYNGWNITSPPSYTQGNAVYN ------------------------------------------------------------ EKLYIHAIGPLLANHGWSNAFFITDQGRSGKQPTGQQQWGDWCNVIGTGFGIRPSANTGD ------------------------------------------2----------------- SLLDSFVWVKPGGECDGTSDSSAPRFDSHCALPDALQPAPQAGAWFQAYFVQLLTNANPS -----------------------------2------------------------------ FL -- >HUWENTOXIN-I; SWP:P56676; PDB:1QK6A; ACKGVFDACTPGKNECCPNRVCSDKHKWCKWKL -1------2------31----2------3---- >SELENOCOSMIA HUWENA LECTI; SWP:Q86C51; PDB:1QK7A; GCLGDKCDYNNGCCSGYVCSRTWKWCVLAGPW -1----2-----31----2------3------ >ERABUTOXIN A; SWP:P01435; PDB:1QKDA; RICFNHQSSQPQTTKTCSPGESSCYNKQWSDFRGTIIERGCGCPTVKPGIKLSCCESEVC --1-------------2------1----------------2-3----------34----4 NN -- >TOXIN 7 FROM PANDINUS IMP; SWP:P58490; PDB:1QKYA; DEAIRCTGTKDCYIPCRYITGCFNSRCINKSCKCYGCT -----1-----2---3-----4----1----2-3--4- >NUCLEASE; SWP:P13717; PDB:1QL0A; SIDNCAVGCPTGGSSKVSIVRHAYTLNNNSTTKFANWVAYHITKDTPASGKTRNWKTDPA ----1---1--------------------------------------------------- LNPADTLAPADYTGANAALKVDRGHQAPLASLAGVSDWESLNYLSNITPQKSDLNQGAWA ------------------------------------------------------------ RLEDQERKLIDRADISSVYTVTGPLYERDMGKLPGTQKAHTIPSAYWKVIFINNSPAVNH ------------------------------------------------------------ YAAFLFDQNTPKGADFCQFRVTVDEIEKRTGLIIWAGLPDDVQASLKSKPGVLPELMGCK ----------------2-----------------------------------------2- N - >S100C PROTEIN; SWP:P31950; PDB:1QLSA; PTETERCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKK ------1----------------------------------------------------- LDLDSDGQLDFQEFLNLIGGLAIACHDSFIKSTQK ----------------------------------- >ESTERASE; SWP:Q7SIA5; PDB:1QLWA; VPKTPAGPLTLSGQGSFFVGGRDVTSETLSLSPKYDAHGTVTVDQMYVRYQIPQRAKRYP ------------------------------------------------------------ ITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGK ------11---------------------------------------------------- APASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPN ------------------------------------------------------------ PTVANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECPKPEDVKPLT -------------------------------------------------2---------- SIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDR ------------------------2----------------------------------- NNLQVADLILDWIGRNTA ------------------ >R-CHII; SWP:NA; PDB:1QM7A; TMCYSHTTTSRAILTNCPGETNCYKKSRRHPPKMVLGRGCGCPTVAPGIKLNCCTTDKCN --1-------------2-----1----------------2-3----------34----4- Y - >GROB[5-73]; SWP:AAC03540; PDB:1QNKA; TELRCQCLQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKNGQKACLNPASPMVKKIIE ----1-2-----------------------1---------------2------------- KMLKNGKSN --------- >ENDO-1,4-B-D-MANNANASE; SWP:Q99036; PDB:1QNRA; ASSFVTISGTQFNIDGKVGYFAGTNCYWCSFLTNHADVDSTFSHISSSGLKVVRVWGFND -------------------------1--1------------------------------- VNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGI ------------------------------------------------------------ NAYVNAFGGNATTWYTNTAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVI ---------------------------------------------------2--2----- VQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDGAYPYTYGEGTDFAKNVQIKSLDFGTF ------------------------------------------------------------ HLYPDSWGTNYTWGNGWIQTHAAACLAAGKPCVFEEYGAQQNPCTNEAPWQTTSLTTRGM ------------------------3------3-----------4---------------- GGDMFWQWGDTFANGAQSNSDPYTVWYNSSNWQCLVKNHVDAIN ---------------------------------4---------- >VES V 5; SWP:Q05110; PDB:1QNXA; FNNYCKIKCLKGGVHTACKYGSLKPNCGNKVVVSYGLTKQEKQDILKEHNDFRQKIARGL ----1---2--------1--------3--------------------------------- ETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYGHDTCRDVAKYQVGQNVALTGST ----------------------------------3------2------------------ AAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEK --------------------------------------------------4--------- WHKHYLVCNYGPSGNFKNEELYQTK -------4----------------- >Ig heavy chain V region 1; SWP:P01750; PDB:1QNZH; QVQLQQSGAELVKPGASVKMSCKASGYTFTTYPIEWMKQNHGKSLEWIGNFHPYSDDTNY ---------------------1-------------------------------------- NEKFKGKAKLTVEKSSSTVYLEFSRLTSDDSAVYYCAIHYGSAYAMDYWGQGTSVTVSS -----------------------------------1----------------------- >T-cell surface glycoprote; SWP:P20937; PDB:1QO3C; STVLDSLQHKVYWFCYGMKCYYFVMDRKTWSGCKQTCQSSSLSLLKIDDEDELKFLQLVV --------------1----1------------2---3----------------------- PSDSCWVGLSYDNKKKDWAWIDNRPSKLALNTRKYNIRDGGCMLLSKTRLDNGNCDQVFI -----------------------------------------4------------4----- CICGKRLD 2-3----- >MFE-23 RECOMBINANT ANTIBO; SWP:NA; PDB:1QOKA; QVKLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEY ---------------------1-------------------------------------- APKFQGKATFTTDTSSNTAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSS -----------------------------------1------------------------ GENVLTQSPAIMSASPGEKVTITCSASSSVSYMHWFQQKPGTSPKLWIYSTSNLASGVPA -----------------------2------------------------------------ RFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELK ---------------------------2------------------- >ACETYL XYLAN ESTERASE; SWP:Q99034; PDB:1QOZA; CPAIHVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSV 1-------------------------------------------2-----2--------- VNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGA -----------------1---------------------3-------------------- VSAVKAAIFMGDPRNIHGLPYNVGTCTTQGFDARPAGFVCPSASKIKSYCDAADPYCCTG -------------------------4-------------3---------5------54-- NDPNVHQGYGQEYGQQALAFINSQLS -------------------------- >LIGNIN PEROXIDASE; SWP:P11542; PDB:1QPAA; VACPDGVHTASNAACCAWFPVLDDIQQNLFHGGQCGAEAHEALRMVFHDSIAISPKLQSQ --1-----------21------------------3------------------------- GKFGGGGADGSIITFSSIETTYHPNIGLDEVVAIQKPFIAKHGVTPGDFIAFAGAVGVSN ------------------------------------------------------------ CPGAPQMQFFLGRPEATQAAPDGLVPEPFHTIDQVLARMLDAGGFDEIETVLLSAHSIAA 3----------------------------------------------------------- ANDVDPTISGLPFDSTPGQFDSQFFVETQLRGTAFPGKTGIQGTVMSPLKGEMRLQTDHL ------------------------------------------------------------ FARDSRTACEWQSFVNNQTKLQEDFQFIFTALSTLGHDMNAMIDCSEVIPAPKPVNFGPS --------4-----------------------------------2--------------- FFPAGKTHADIEQACASTPFPTLITAPGPSASVARIPPPPSPN --------------4---------------------------- >BETA-2 MICROGLOBULIN; SWP:P30504; PDB:1QQDA; SHSMRYFSTSVSWPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGEPREPWVEQEGPEYWD ------------------------------------------------------------ RETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQRMFGCDLGPDGRLLRGYNQFAYDGK ---------------------------------------1-------------------- DYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQR ------------------------------------------1----------------- AEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTF ---------------------2-------------------------------------- QKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW -----------------2--------------- >COMPLEMENT C3DG; SWP:P01026; PDB:1QQFA; GEQNMIGMTPTVIAVHYLDQTEQWEKFGLEKRQEALELIKKGYTQQLAFKQPISAYAAFN ------------------------------------------------------------ NRPPSTWLTAYVSRVFSLAANLIAIDSQVLCGAVKWLILEKQKPDGVFQEDGPVIHQEMI ------------------------------1----------------------------- GGFRNTKEADVSLTAFVLIALQEARDICEGQVNSLPGSINKAGEYLEASYLNLQRPYTVA ---------------------------1-------------------------------- IAGYALALMNKLEEPYLTKFLNTAKDRNRWEEPGQQLYNVEATSYALLALLLLKDFDSVP ------------------------------------------------------------ PVVRWLNDERYYGGGYGSTQATFMVFQALAQYRADV ------------------------------------ >LYSOZYME C; SWP:NA; PDB:1QQYA; KIFSKCELARKLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLN -----1-----------------------2------------------------------ SKWWCKSNSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDPNGMSAWVAWVKHCKGKDL ----3----------4---3-------------4--------------------2----- SKYLASCNL ------1-- >Pepsin A [Precursor]; SWP:P00790; PDB:1QRPE; VDEQPLENYLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYCSSLACTNHNRFNPED --------------------------------------------1----1---------- SSTYQSTSETVSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGI ------------------------------------------------------------ LGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLSADDQSGSVVIFGGIDSSYYTGSLN ------------------------------------------------------------ WVPVTVEGYWQITVDSITMNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASEN -------------------------2---2------------------------------ SDGDMVVSCSAISSLPDIVFTINGVQYPVPPSAYILQSEGSCISGFQGMNLPTESGELWI --------3--------------------------------3------------------ LGDVFIRQYFTVFDRANNQVGLAPVA -------------------------- >PLASMEPSIN; SWP:O60989; PDB:1QS8A; SENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDS ----------------------------------------------1----1-------- SKSKSYEKDGTKVDITYGSGTVKGFFSKDLVTLGHLSMPYKFIEVIDTDDLEPIYSSVEF ------------------------------------------------------------ DGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEG ------------------------------------------------------------ NITYEKLNHDLYWQIDLDVHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVIKVP ------------------------------------------------------------ FLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMITMLPVDIDSNTFI --------2-----------------------------------2--------------- LGDPFMRKYFTVFDYDKESVGFAIAKN --------------------------- >SOLUBLE LYTIC TRANSGLYCOS; SWP:P03810; PDB:1QSAA; DSLDEQRSRYAQIKQAWDNRQMDVVEQMMPGLKDYPLYPYLEYRQITDDLMNQPAVTVTN ------------------------------------------------------------ FVRANPTLPPARTLQSRFVNELARREDWRGLLAFSPEKPGTTEAQCNYYYAKWNTGQSEE ---------------------------------------------1-------------- AWQGAKELWLTGKSQPNACDKLFSVWRASGKQDPLAYLERIRLAMKAGNTGLVTVLAGQM ------------------1----------------------------------------- PADYQTIASAIISLANNPNTVLTFARTTGATDFTRQMAAVAFASVARQDAENARLMIPSL ------------------------------------------------------------ AQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGD ------------------------------------------------------------ RRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQRGFYPMVAAQRI ------------------------------------------------------------ GEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSKSKTEQAQLA ------------------------------------------------------------ RYAFNNQWWDLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESA ------------------------------------------------------------ WNPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQQ ------------------------------------------------------------ FGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAYYRY ------------------------------------------------------------ FMGDKPTLMSATEWGRRY ------------------ >INFLUENZA RECOMBINANT HA2; SWP:A2V839; PDB:1QU1A; QAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWS ------------------------------------------------------------ YNAELLVALENQHTIDLTDSEMNKLFEKTRRQLGSFKIYHKCDNACIESIRNGTYDHDVY -----------------------------------------1---1-------------- RDEALNNRFQIKG ------------- >ACUTOLYSIN-C; SWP:P60244; PDB:1QUAA; PAPQTSIELFLIVDHSMYAKYNSNSSKITTTLKARVNIMNAIYSSLNLVITLSGIEMWSA ------------------------------------------------------------ ADLITVQSSSRNTLKLFASWRETDLLKRTSNDNAQLLTATNFNGNTVGLAYLKTMCNSKY -------------------------------------------------------1---- SVGLIQDHSAIPLLMAVTMAHELGHNLGMNHDGAGCSCATCIMAPVLSSGPAKSFSDCSK -----------------------------------2-3--3----------------2-- HDYQSFLTIHKPQCLLN -------------1--- >HUMAN BETA2-GLYCOPROTEIN ; SWP:P02749; PDB:1QUBA; GRTCPKPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKC ---1---------------------------2--------------1------------2 TPRVCPFAGILENGAVRYTTFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAP ----3-------------------------4-------------3------------4-- IICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLPE --5-------------------------------6-------------5----------- CREVKCPFPSRPDNGFVNYPAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWSAMPS 6----7----------------------------8-------------7----------- CKASCKVPVKKATVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTEDAQCIDGT 8---9-----------------------------------a------b-------9---- IEVPKCFKEHTDASDVKPC -----a------------b >HSTX1 TOXIN; SWP:P59867; PDB:1QUZA; ASCRTPKDCADPCRKETGCPYGKCMNRKCKCNRC --1-----2---3-----4----1----2-3--4 >FIMBRIAL PROTEIN; SWP:P17838; PDB:1QVEA; ISEFARAQLSEAMTLASGLKTKVSDIFSQDGSCPANTAATAGIEKDTDINGKYVAKVTTG --------------------------------1--------------------------- GTAAASGGCTIVATMKASDVATPLRGKTLTLTLGNADKGSYTWACTSNADNKYLPKTCQT --------1-----------------------------------2------------2-- ATTTTP ------ >ALPHA-MANNOSIDASE II; SWP:Q24451; PDB:1QWNA; CQDVVQDVPNVDVQMLELYDRMSFKDIDGGVWKQGWNIKYDPLKYNAHHKLKVFVVPHSH 1----------------------------------------------------------- NDPGWIQTFEEYYQHDTKHILSNALRHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMK ------------------------------------------------------------ SIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIDPFGHSP ------------------------------------------------------------ TMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYD ------------------------------------------------------------ IPHTCGPDPKVCCQFDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYR ----2------23-------------3--------------------------------- TNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAE ------------------------------------------------------------ RAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDG ------------------------------------------------------------ MARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLT ------------------------------------------------------------ KPSIYSPDFSFSYFTLDDSRWPGSGVEDSRTTIILGEDILPSKHVVMHNTLPHWREQLVD ------------------------------------------------------------ FYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTIHPQGSTTKYRIIFKARVPPMGLA ------------------------------------------------------------ TYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSE ------------------------------------------------------------ QGLLKSIQLTQDSPHVPVHFKFLKYGVRSHGDRSGAYLFLPNGPASPVELGQPVVLVTKG ------------------------------------------------------------ KLESSVSVGLPSVVHQTIMRGGAPEIRNLVDIGSLDNTEIVMRLETHIDSGDIFYTDLNG ------------------------------------------------------------ LQFIKRRRLDKLPLQANYYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRL ------------------------------------------------------------ ASDDERGLGQGVLDNKPVLHIYRLVLEKVNNCVRPSKLHPAGYLTSAAHKASQSLLDPLD -------------------------------4---------------------------- KFIFAENEWIGAQGQFGGDHPSAREDLDVSVMRRLTKSSAKTQRVGYVLHRTNLMQCGTP --------------------------------------------------------4--- EEHTQKLDVCHLLPNVARCERTTLTFLQNLEHLDGMVAPEVCPMETAAYVSSHS ---------5--------5----------------------1------------ >PHYTASE; SWP:O00092; PDB:1QWOA; CDTVDLGYQCSPATSHLWGQYSPFFSLEDELSVSSKLPKDCRITLVQVLSRHGARYPTSS 1--------1------------------------------2------------------- KSKKYKKLVTAIQANATDFKGKFAFLKTYNYTLGADDLTPFGEQQLVNSGIKFYQRYKAL ------------------------------------------------------------ ARSVVPFIRASGSDRVIASGEKFIEGFQQAKLADPGATNRAAPAISVIIPESETFNNTLD ------------------------------------------------------------ HGVCTKFEASQLGDEVAANFTALFAPDIRARAEKHLPGVTLTDEDVVSLMDMCSFDTVAR ---3------------------------------------------------4------- TSDASQLSPFCQLFTHNEWKKYNYLQSLGKYYGYGAGNPLGPAQGIGFTNELIARLTRSP ----------4------------------------------------------------- VQDHTSTNSTLVSNPATFPLNATMYVDFSHDNSMVSIFFALGLYNGTEPLSRTSVESAKE ------------------------------------------------------------ LDGYSASWVVPFGARAYFETMQCKSEKEPLVRALINDRVVPLHGCDVDKLGRCKLNDFVK ----------------------2---------------------5-------5------- GLSWARSGGNWGECF -------------3- >INTERFERON REGULATORY FAC; SWP:Q14653; PDB:1QWTA; ENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPGWPVTLPDP ------------------------------------------------------------ GMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELLPNSGHGPD ------------------1---------------------1------------------- GEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQPWTKRLVMVKVV ------------------------------------------------------------ PTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYKAYLQDLVEGMDFQGPGES ----------------------------------------------------------- >THIOL PEROXIDASE; SWP:P37901; PDB:1QXHA; SQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVC -----------------------------------------------------------1 AASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGVA ---------------------------------1-------------------------- IADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAV -------------------------------------------- >HYPOTHETICAL PROTEIN MDS0; SWP:Q96CD2; PDB:1QZUA; MERKFHVLVGVTGSVAALKLPLLVSKLLGLEVAVVTTERAKHFYSPQDIPVTLYSDADEW ------------------------------------------------------------ EMWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLLTCVMRAWDRSKPLLFC ---------------------------------------1-----1-------------- PAMNTAMWEHPITAQQVDQLKAFGYVEIPVGTIVDKVKEV ---------------------------------------- >REVERSE TRANSCRIPTASE; SWP:NA; PDB:1R0AH; QITLKESGPGIVQPSQPFRLTCTFSGFSLSTSGIGVTWIRQPSGKGLEWLATIWWDDDNR ---------------------1-------------------------------------- YNPSLKSRLTVSKDTSNNQAFLNMMTVETADTAIYYCAQSAITSVTDSAMDHWGQGTSVT ------------------------------------1----------------------- VSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVL -----------------------------2------------------------------ QSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPADC ------------------------2-------------------- >REVERSE TRANSCRIPTASE; SWP:NA; PDB:1R0AL; DIQMTQTTSSLSASLGDRVTISCSASQDISSYLNWYQQKPEGTVKLLIYYTSSLHSGVPS ----------------------1------------------------------------- RFSGSGSGTDYSLTISNLEPEDIATYYCQQYSKFPWTFGGGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNR -------------2----------------- >SUBTILISIN CARLSBERG; SWP:P01004; PDB:1R0RI; VDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC --1-------2-------3----------2--1-----------------3 >ADP-RIBOSYL CYCLASE; SWP:P29241; PDB:1R12A; IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKD --------------1------------------1----------------2--------- FFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGF ---------------------------------------------------3-------- NEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYEL ----3-----2------------------------------------------------- PNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCS -------------------------4--------------------4-----------5- DNPNARECRLA -------5--- >PULMONARY SURFACTANT-ASSO; SWP:P08427; PDB:1R13A; DEELQTELYEIKHQILQTMGVLSLQGSMLSVGDKVFSTNGQSVNFDTIKEMCTRAGGNIA ---------------------------------------------------1-------- VPRTPEENEAIASIAKKYNNYVYLGMIEDQTPGDFHYLDGASVSYTNWYPGEPRGQGKEK ------------------------------------------------------------ CVEMYTDGTWNDRGCLQYRLAVCEF 2-------------2-------1-- >PALICOUREIN; SWP:P84645; PDB:1R1FA; TFCGETCRVIPVCTYSAALGCTCDDRSDGLCKRNGDP --1---2-----3-------1-2-------3------ >NEPRILYSIN; SWP:P08473; PDB:1R1HA; GICKSSDCIKSAARLIQNMDATTEPCTDFFKYACGGWLKRNVIPETSSRYGNFDILRDEL --1----1-----------------2-------3-------------------------- EVVLKDVLQEPKTEDIVAVQKAKALYRSCINESAIDSRGGEPLLKLLPDIYGWPVATENW ----------------------------4------------------------------- EQKYGASWTAEKAIAQLNSKYGKKVLINLFVGTDDKNSVNHVIHIDQPRLGLPSRDYYEC -----------------------------------------------------------5 TGIYKEACTAYVDFMISVARLIRQEERLPIDENQLALEMNKVMELEKEIANATAKPEDRN -------5---------------------------------------------------- DPMLLYNKMTLAQIQNNFSLEINGKPFSWLNFTNEIMSTVNISITNEEDVVVYAPEYLTK ------------------------------------------------------------ LKPILTKYSARDLQNLMSWRFIMDLVSSLSRTYKESRNAFRKALYGTTSETATWRRCANY --------------------------------------------------------4--- VNGNMENAVGRLYVEAAFAGESKHVVEDLIAQIREVFIQTLDDLTWMDAETKKRAEEKAL ------------------------------------------------------------ AIKERIGYPDDIVSNDNKLNNEYLELNYKEDEYFENIIQNLKFSQSKQLKKLREKVDKDE ------------------------------------------------------------ WISGAAVVNAFYSSGRNQIVFPAGILQPPFFSAQQSNSLNYGGIGMVIGHEITHGFDDNG ------------------------------------------------------------ RNFNKDGDLVDWWTQQSASNFKEQSQCMVYQYGNFSWDLAGGQHLNGINTLGENIADNGG --------------------------6--------------------------------- LGQAYRAYQNYIKKNGEEKLLPGLDLNHKQLFFLNFAQVWCGTYRPEYAVNSIKTDVHSP ----------------------------------------3------------------- GNFRIIGTLQNSAEFSEAFHCRKNSYMNPEKKCRVW --------------------2-----------6--- >OUTER MEMBRANE PROTEIN CL; SWP:P38367; PDB:1R1MA; PQYVDETISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTDFMGSDKY ------------------------------------------------------------ NQALSERRAYVVANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKRE -----------------------------------------1------------------ ALIACIEPDRRVDVKIRSIV ----1--------------- >IGG3-KAPPA ANTIBODY (LIGH; SWP:NA; PDB:1R24B; DVQLVESGGGLVQPGGSRKLSCAASGFTFSNFGMHWVRQAPEKGLEWVAYISSGGSSINY ---------------------1-------------------------------------- ADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAIYYCTRGGTGTRSLYYFDYWGQGATLIV -----------------------------------1------------------------ SSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPGPVTVKWNYGALSSGVRTVSSVLQ ----------------------------2------------------------------- SGFYSLSSLVTVPSSTWPSQTVICNVAHPASKTDLIK -----------------------2------------- >THIOREDOXIN; SWP:NA; PDB:1R26A; PSVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDADN ------------------------------1--1-------------------------- NSEIVSKCRVLQLPTFIIARSGKMLGHVIGANPGMLRQKLRDIIKD ---------------------------------------------- >TRNA PSEUDOURIDINE SYNTHA; SWP:Q9WZW0; PDB:1R3EA; MKHGILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFY ------------------------------------------------------------ KDLKKVYWVKMRLGLITETFDITGEVVEERECNVTEEEIREAIFSFVGEYDQVPPAYSAK -------------------------------1---------------------------- KYKGERLYKLAREGKIINLPPKRVKIFKIWDVNIEGRDVSFRVEVSPGTYIRSLCMDIGY ------------------------------------------------------------ KLGCGATAVELVRESVGPHTIEESLNVFEAAPEEIENRIIPLEKCLEWLPRVVVHQESTK ---1-------------------------------------------------------- MILNGSQIHLEMLKEWDGFKKGEVVRVFNEEGRLLALAEAERNSSFLETLRKERVLTLRK ------------------------------------------------------------ VFNTR ----- >MHC H2-TL-T10-129; SWP:Q31206; PDB:1R3HA; GSHSLRYFYTAVSRPGLGEPWFIIVGYVDDMQVLRFSSKEETPRMAPWLEQEEADDWEQQ ------------------------------------------------------------ THIVTIQGQLSERNLMTLVHFYNKSMDDSHTLQWLQDCDVEPDRHLCLWYNQLAYDSEDL -------------------------------------1--------2------------- PTLSENPSSCTQHLEGHCSDVLQKYLEKGKERLLRSDPPKAHVTRHPRPEGDVTLRCWAL ---------2-------1--------------------------------------3--- GFYPADITLTWQKDGEELTVEFVETRPAGDGTFQKWAAVVVPLGKVQSYTCHVDHEGLPE --------------------------------------------------3--------- PLTLRWEP -------- >ANGIOTENSIN I CONVERTING ; SWP:Q9BYF1; PDB:1R42A; STIEEQAKTFLDKFNHEAEDLFYQSSLASWNYNTNITEENVQNMNNAGDKWSAFLKEQST ------------------------------------------------------------ LAQMYPLQEIQNLTVKLQLQALQQNGSSVLSEDKSKRLNTILNTMSTIYSTGKVCNPDNP ------------------------------------------------------1----- QECLLLEPGLNEIMANSLDYNERLWAWESWRSEVGKQLRPLYEEYVVLKNEMARANHYED --1--------------------------------------------------------- YGDYWRGDYEVNGVDGYDYSRGQLIEDVEHTFEEIKPLYEHLHAYVRAKLMNAYPSYISP ------------------------------------------------------------ IGCLPAHLLGDMWGRFWTNLYSLTVPFGQKPNIDVTDAMVDQAWDAQRIFKEAEKFFVSV ------------------------------------------------------------ GLPNMTQGFWENSMLTDPGNVQKAVCHPTAWDLGKGDFRILMCTKVTMDDFLTAHHEMGH -------------------------2----------------2----------------- IQYDMAYAAQPFLLRNGANEGFHEAVGEIMSLSAATPKHLKSIGLLSPDFQEDNETEINF ------------------------------------------------------------ LLKQALTIVGTLPFTYMLEKWRWMVFKGEIPKDQWMKKWWEMKREIVGVVEPVPHDETYC ------------------------------------------------------------ DPASLFHVSNDYSFIRYYTRTLYQFQFQEALCQAAKHEGPLHKCDISNSTEAGQKLFNML -------------------------------3-----------3---------------- RLGKSEPWTLALENVVGAKNMNVRPLLNYFEPLFTWLKDQNKNSFVGWSTDWSPYAD --------------------------------------------------------- >ALPHA-GALACTOSIDASE A; SWP:P06280; PDB:1R46A; LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI --------------------1---2------2---------------------------- DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGY --1-----------------------------------------------3--------- YDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYSCEWPLYMWPF --------------------3-----------------------------4--------- QKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIG -----------4------------------------------------------------ NFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQL ------------------------------------------------------------ RQGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVK ----------------------------------------------5---5--------- RKLGFYEWTSRLRSHINPTGTVLLQLENTM ------------------------------ >ANDROGEN RECEPTOR; SWP:P15207; PDB:1R4IA; PQKTCLICGDEASGAHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPSC ---------------------1--1----------------------------------- RLRKCYEAGMTLGA -------------- >SHIGA-LIKE TOXIN TYPE II ; SWP:Q9R398; PDB:1R4PA; REFTIDFSTQQSYVSSLNSIRTEISTPLEHISQGTTSVSVINHTPPGSYFAVDIRGLDVY ------------------------------------------------------------ QARFDHLRLIIEQNNLYVAGFVNTATNTFYRFSDFTHISVPGVTTVSMTTDSSYTTLQRV ------------------------------------------------------------ AALERSGMQISRHSLVSSYLALMEFSGNTMTRDASRAVLRFVTVTAEALRFRQIQREFRQ ------------------------------------------------------------ ALSETAPVYTMTPGDVDLTLNWGRISNVLPEYRGEDGVRVGRISFNNISAILGTVAVILN ------------------------------------------------------------ CHECQITGDRPVIKINNTLWESNTAAAFLNRKSQFLYTTGK 1--1------------------------------------- >Shiga-like toxin II B sub; SWP:Q57249; PDB:1R4PB; ADCAKGKIEFSKYNEDDTFTVKVDGKEYWTSRWNLQPLLQSAQLTGMTVTIKSSTCESGS --1----------------------------------------------------1---- GFAEVQFNND ---------- >SHT CYTOTOXIN A SUBUNIT; SWP:Q7AK38; PDB:1R4QA; KEFTLDFSTAKTYVDSLNVIRSAIGTPLQTISSGGTSLLMIDSGTGDNLFAVDVRGIDPE ------------------------------------------------------------ EGRFNNLRLIVERNNLYVTGFVNRTNNVFYRFADFSHVTFPGTTAVTLSGDSSYTTLQRV ------------------------------------------------------------ AGISRTGMQINRHSLTTSYLDLMSHSGTSLTQSVARAMLRFVTVTAEALRFRQIQRGFRT ------------------------------------------------------------ TLDDLSGRSYVMTAEDVDLTLNWGRLSSVLPDYHGQDSVRVGRISFGSINAILGSVALIL ------------------------------------------------------------ NCHFPSMCPADGRVRGITHNKILWDSSTLGAILMRR -1-----1---------------------------- >ADAM 33; SWP:Q9BZ11; PDB:1R55A; TRKYLELYIVADHTLFLTRHRNLQHTKQRLLEVANYVDQLLRTLDIQVALTGLEVWTERD ------------------------------------------------------------ RSRVTQDANATLWAFLQWRRGLWAQRPHDSAQLLTGRAFQGATVGLAPVEGMCRAESSGG ----------------------------------------------------1------- VSTDHSELPIGAAATMAHEIGHSLGLSHDPDGCCVEAAAESGGCVMAAATGHPFPRVFSA --------------------------------23---------3---------------- CSRRQLRAFFRKGGGACLSNAPS 2---------------1------ >PHEROMONE-BINDING PROTEIN; SWP:Q8WRW5; PDB:1R5RA; DWVPPEVFDLVAEDKARCMSEHGTTQAQIDDVDKGNLVNEPSITCYMYCLLEAFSLVDDE -----------------1--------------------------2---1----------- ANVDEDIMLGLLPDQLQERAQSVMGKCLPTSGSDNCNKIYNLAKCVQESAPDVWFVI --------------------------3--------2--------3------------ >KEXIN; SWP:P13134; PDB:1R64A; LLPVKEAEDKLSINDPLFERQWHLVNPSFPGSDINVLDLWYNNITGAGVVAAIVDDGLDY ------------------------------------------------------------ ENEDLKDNFCAEGSWDFNDNTNLPKPRLSDDYHGTRCAGEIAAKKGNNFCGVGVGYNAKI -------------------------------------------------1---------- SGIRILSGDITTEDEAASLIYGLDVNDIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEG ------------------------------------------------------------ RDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDLHPPYSEGCSAVMAVTY ---------------------2-----------------------------2-------- SSGSGEYIHSSDINGRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVG ----------------1------------------------------------------- LEKNADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSKTWENVNAQTWFYLPTLYVSQSTN ------------------------------------------------------------ STEETLESVITISEKSLQDANFKRIEHVTVTVDIDTEIRGTTTVDLISPAGIISNLGVVR ------------------------------------------------------------ PRDVSSEGFKDWTFMSVAHWGENGVGDWKIKVKTTENGHRIDFHSWRLKLFGESIDSSKT ------------------------------------------------------------ E - >KUNITZ TRYPSIN INHIBITOR; SWP:P83667; PDB:1R8NA; SDAEKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLP -------------------------------------------1---------------- VRFSSPEEKQGKIYTDTELEIEFVEKPDCAESSKWVIVKDSGEARVAIGGSEDHPQGELV ----------------------------1------------------------------- RGFFKIEKLGSLAYKLVFCPKSDSGSCSDIGINYEGRRSLVLKSSDDVPFRVVFVKPRSG ------------------2-------2--------------------------------- SETES ----- >KUNITZ TRYPSIN INHIBITOR; SWP:P84144; PDB:1R8OA; RLVDTDGKPIENDGAEYYILPSVRGKGGGLVLAKSGGEKCPLSVVQSPSELSNGLPVRFK ---------------------------------------1-------------------- ASPRSKYISVGMLLGIEVIESPECAPKPSMWSVKSG -----------------------1------------ >GLYCINE BETAINE-BINDING P; SWP:P14177; PDB:1R9LA; ADLPGKGITVNPVQSTITEETFQTLLVSRALEKLGYTVNKPSEVDYNVGYTSLASGDATF ------------------------------------------------------------ TAVNWTPLHDNMYEAAGGDKKFYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKDPKIA ------------------------------------------------------------ KLFDTNGDGKADLTGCNPGWGCEGAINHQLAAYELTNTVTHNQGNYAAMMADTISRYKEG ---------------1-----1-------------------------------------- KPVFYYTWTPYWVSNELKPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVA ------------------------------------------------------------ NKAWAEKNPAAAKLFAIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGW ------------------------------------------------------------ VNEALAAQK --------- >CYSTEINE-RICH SECRETORY P; SWP:P60623; PDB:1RC9A; NVDFDSESPRKPEIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYRCIESH -------------------------------------------------------1---- SSYESRVIEGIKCGENIYMSPYPMKWTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIV ------------2----------------------------------------------- WYKSYRIGCAAAYCPSSPYSYFFVCQYCPAGNFIGKTATPYTSGTPCGDCPSDCDNGLCT --------3----1----------3--2------------------4--5---4----5- NPCTRENKFTNCNTMVQQSSCQDNYMKTNCPASCFCQNKII --6--------7--------8--------7---8-6----- >Mannose-binding protein C; SWP:P08661; PDB:1RDO1; KYFMSSVRRMPLNRAKALCSELQGTVATPRNAEENRAIQNVAKDVAFLGITDQRTENVFE ------------------1----------------------------------------- DLTGNRVRYTNWNEGEPNNVGSGENCVVLLTNGKWNDVPCSDSFLVVCEFS -------------------------2-------------2-------1--- >RIBONUCLEASE MS; SWP:P00653; PDB:1RDS; ESCEYTCGSTCYWSSDVSAAKAKGYSLYESGDTIDDYPHEYHDYEGFDFPVSGTYYEYPI --1---2---1------------------------------------------------- MSDYDVYTGGSPGADRVIFNGDDELAGVITHTGASGDDFVACSSS -----------------------------------------2--- >AHPLAAO; SWP:Q6STF1; PDB:1REOA; DRNPLEECFRETDYEEFLEIARNGLKATSNPKHVVVVGAGMSGLSAAYVLSGAGHQVTVL -------1---------------------------------------------------- EASERAGGRVRTYRNDKEDWYANLGPMRLPEKHRIVREYIRKFGLQLNEFSQENDNAWYF ------------------------------------------------------------ IKNIRKRVGEVKKDPGVLKYPVKPSEEGKSAGQLYEESLGKVVEELKRTNCSYILNKYDT --------------------------------------------------1--------- YSTKEYLLKEGNLSPGAVDMIGDLMNEDSGYYVSFPESLRHDDIFAYEKRFDEIVGGMDK ------------------------------------------------------------ LPTSMYRAIEEKVHLNAQVIKIQKNAEKVTVVYQTPAKEMASVTADYVIVCTTSRATRRI ------------------------------------------------------------ KFEPPLPPKKAHALRSVHYRSGTKIFLTCTKKFWEDEGIHGGKSTTDLPSRFIYYPNHNF ----------------------------2------------------------------- TSGVGVIIAYGIGDDANFFQALDFKDCADIVINDLSLIHQLPREEIQTFCYPSMIQKWSL -------------------------------------------------2---------- DKYAMGGITTFTPYQFQHFSESLTASVDRIYFAGEHTAEAHGWIDSTIKSGLRAARDVNR ------------------------------------------------------------ ASEQ ---- >BONE MORPHOGENETIC PROTEI; SWP:P12643; PDB:1REWA; SSCKRHPLYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPLADHLNSTNHAIVQTLVNSVN --1----------------------------2---3------------------------ SKIPKACCVPTELSAISMLYLDENEKVVLKNYQDMVVEGCGCR -------1-------------------------------2-3- >Bone morphogenetic protei; SWP:P36894; PDB:1REWC; TLPFLKCYCSGHCPDDAINNTCITNGHCFAIIEEDDQGETTLASGCMKYEGSDFQCKDSP ------1-2---2--------3-----1-----------------3---------4---- KAQLRRTIECCRTNLCNQYLQPTLPP ---------45----5---------- >COAGULATION FACTOR IX; SWP:P00740; PDB:1RFNA; VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEE -------------------------1---------------1------------------ TEHTEQKRNVIRIIPHHNYNAA ---------------------- >Coagulation factor IX [Pr; SWP:P00740; PDB:1RFNB; MTCNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPCGRVSVSQTSK --1------2---1---------2-3------------3------------------ >RIESKE PROTEIN; SWP:P08980; PDB:1RFS; TIAKDALGNDVIAAEWLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGC -----------------------------------------------------------1 VVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTG --------------1--------------------------------------------- EAPWWSA ------- >RESISTIN; SWP:Q99P87; PDB:1RGXA; CPIDEAIDKKIKQDFNSLFPNAIKNIGLNCWTVSSRGKLASCPEGTAVLSCSCGSACGSW -----------------------------1-----------2--------3-4---5--- DIREEKVCHCQCARIDWTAARCCKLQVAS -------3-4-5---------21------ >RESISTIN-LIKE BETA; SWP:Q99P86; PDB:1RH7A; CSFESLVDQRIKEALSRQEPKTISCTSVTSSGRLASCPAGMVVTGCACGYGCGSWDIRNG ------------------------1-----------2--------3-4---5-------- NTCHCQCSVMDWASARCCRMA --3-4-5---------21--- >ENDO-BETA-MANNANASE; SWP:Q8L5J1; PDB:1RH9A; NNFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWA ------------------------------------------------------------ FSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAV ------------------------------------------------------------ QRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPS ------------------------------------------------------------ DLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMRQYNPNSYIFGTNFISNNQVQ ------------------------------------------------------------ GIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSKMLKKPLLIAEFGKSTKTPGYT ------------------------------------------------------------ VAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPSTSRVIL -----------------1------1----------------------------------- LQSLRLSKLS ---------- >TYROSINE-PROTEIN KINASE R; SWP:Q06418; PDB:1RHFA; GAPVKLTVSQGQPVKLNCSVEGEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSV -----------------1------------------------------------------ ERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPE ---------1------------------------------------------2------- PVTIVWWRGTTKIGGPAPSPSVLNVTGVTQSTFSCEAHNLKGLASSRTATVHLQ ----------------------------------2------------------- >GRANULOCYTE COLONY-STIMUL; SWP:P09919; PDB:1RHGA; LPQSFLLKCLEQVRKIQGDGAALQEKLCATYKLCHPEELVLLGHSLGIPWAPLLAGCLSQ ---------------------------1-----1-------------------------- LHSGLFLYQGLLQALEGISPELGPTLDTLQLDVADFATTIWQQMEELGMMPAFASAFQRR ------------------------------------------------------------ AGGVLVASHLQSFLEVSYRVLRHLA ------------------------- >CAMELID ANTIBODY HEAVY CH; SWP:P00698; PDB:1RI8A; VQLVESGGGSVQAGGSLRLSCAVSGYKDRNYCMGWFRRAPGKEREGVAVIDSSGRTAYAD --------------------1----------2---------------------------- SVKGRFTISRDVALDTAYLQMNSLKPEDTAMYYCAAGWSSLGSCGTNRNRYNYWGQGTQV ---------------------------------1---------2---------------- TVSS ---- >COMPLEMENT CONTROL PROTEI; SWP:P10998; PDB:1RIDA; CCTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFN -1--------------------------------2---------------1--------- QCIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPE -2----3-------------------------4-------------3------------- APICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSDPP ---4----5---------------------------6-------------5--------- TCQIVKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWKPELP -6----7---------------------------8-------------7----------- KCVR -8-- >RIESKE IRON-SULFUR PROTEI; SWP:P07588; PDB:1RIE; AMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKK ------------------------------------------------------------ PEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPSYEFTS --------------1---------------1----------------------------- DDMVIVG ------- >ECTODYSPLASIN-A ISOFORM E; SWP:Q92838; PDB:1RJ8A; PAVVHLQGQGSAIQVKNDLSGGVLNDWSRITMNPKVFKLHPRSGELEVLVDGTYFIYSQV ------------------------------------------------------------ YYINFTDFASYEVVVDEKPFLQCTRSIETGKTNYNTCYTAGVCLLKARQKIAVKMVHADI ----------------------1-------------1----------------------- SINMSKHTTFFGAIRLGEAP -------------------- >CAMELID HEAVY CHAIN ANTIB; SWP:P00698; PDB:1RJCA; VQLQASGGGSVQAGQSLRLSCATSATSSSNCMGWFRQAPGKEREGVAVIDTGRGNTAYAD --------------------1---------2----------------------------- SVQGRLTISLDNNTLYLQMNSLKPEDTAMYYCAADTSTWYRGYCGTNPNYFSYWGQGTQV -------------------------------1-----------2---------------- TVS --- >POTASSIUM CHANNEL TOXIN K; SWP:NA; PDB:1RJIA; TPYPVNCKTDRDCVMCGLGISCKNGYCQGCT ------1-----2--3-----1----2--3- >Outer surface protein B [; SWP:P17739; PDB:1RJLB; QVQLQQPGSVLVRPGASVKLSCKASGFTFTSSWMHWAKQRPGQGLEWIGEIHPNSGNTHY ---------------------1-------------------------------------- NEKFKGKATLTVDTSSSTAYVDLSSLTSEDSAVYYCARMRYGDYYAMDNWGQGTSVTVSS -----------------------------------1------------------------ AKTTAPPVYPLAPVCGDTTGSSVTLGCLVKGYFPESVTLLWNSGSLSSGVHTFPAVLQSD --------------------------2--------------------------------- LYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRG ---------------------2------------------- >SMALL INDUCIBLE CYTOKINE ; SWP:O14625; PDB:1RJTA; FPMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQ --------1-2------------------------1----------------2------- ARLIIKKVERKNF ------------- >HYPOTHETICAL PROTEIN; SWP:Q8ZYK2; PDB:1RKIA; MKKHIIIKTIPKKEEIISRDLCDCIYYYDNSVICKPIGPSKVYVSTSLENLEKCLQLHYF ---------------------1-2---------1-------------------2------ KKLVKNIEIFDEVHNSKPNCDKCLIVEIGGVYFVRRVNGVP -------------------3--3------------------ >AZURIN-I; SWP:P56547; PDB:1RKRA; AECSVDIAGNDGMQFDKKEITVSKSCKQFTVNLKHPGKLAKNVMGHNWVLTKQADMQGAV --1----------------------1---------------------------------- NDGMAAGLDNNYVKKDDARVIAHTKVIGGGETDSVTFDVSKLAAGEDYAYFCSFPGHFAL ------------------------------------------------------------ MKGVLKLVD --------- >CYTOTOXIN 1; SWP:P01451; PDB:1RL5A; LKCNKLVPIAYKTCPEGKNLCYKMFMMSDLTIPVKRGCIDVCPKNSLLVKYVCCNTDRCN --1----------2------1----------------2---3----------34----4- >RIBONUCLEOTIDE REDUCTASE ; SWP:P00452; PDB:1RLR; RDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADL ------------------------------------------------------------ ISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFK ------------------------------------------------------------ QMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETR ------------------------------------------------------------ LQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVS -----------------------------------1------------------------ QRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMW ------------------------------------------------------------ HLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFF ------------------------------------------------------------ ADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPA ------------------------------------------------------------ IAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELDELAILAVRAL --------------------------------1--------------------------- DALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQY ------------------------------------------------------------ YLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTH ------------------------------------------------------------ GLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELL ------------------------------------------------------------ WEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTL ------------------------------------------------------------ YYQNTRDDIDDLSNFQL ----------------- >IGG2A-KAPPA R6.5 FAB (HEA; SWP:NA; PDB:1RMFH; QVQLQQSGPELVRPGVSVKISCKGSGYTFIDYAIHWVKESHAKSLEWIGVISAYSGDTNY ---------------------1-------------------------------------- NQKFKGKATMTVDKSSNTAYLELARLTSEDSAIYYCARGGWLLLSFDYWGQGTTLTVSSA -----------------------------------1------------------------ KTTAPSVTPLAPVCGDTTGSSVTLGVLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDL ------------------------------------------------------------ YTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKI ------------------------------------ >RHAMNOGALACTURONASE A; SWP:Q00001; PDB:1RMG; QLSGSVGPLTSASTKGATKTCNILSYGAVADNSTDVGPAITSAWAACKSGGLVYIPSGNY --------------------1-------------------------1------------- ALNTWVTLTGGSATAIQLDGIIYRTGTASGNMIAVTDTTDFELFSSTSKGAVQGFGYVYH ------------------------------------------------------------ AEGTYGARILRLTDVTHFSVHDIILVDAPAFHFTMDTCSDGEVYNMAIRGGNEGGLDGID ------------------------------------------------------------ VWGSNIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGADTDVTDIVYRN ------------------2----------------2------------------------ VYTWSSNQMYMIKSNGGSGTVSNVLLENFIGHGNAYSLDIDGYWSSMTAVAGDGVQLNNI ------------------------------------------------------------ TVKNWKGTEANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGSSELYLCRSAYGSGYCL ---------------------3-----3---------------------4--------4- KDSSSHTSYTTTSTVTAAPSGYSATTMAADLATAFGLTASIPIPTIPTSFYPGLTPYSAL ------------------------------------------------------------ AG -- >MU-O-CONOTOXIN MRVIB; SWP:Q26443; PDB:1RMKA; ACSKKWEYCIVPILGFVYCCPGLICGPFVCV -1------2---------31----2----3- >DISINTEGRIN SCHISTATIN; SWP:P83658; PDB:1RMRA; NSVHPCCDPVICEPREGEHCISGPCCENCYFLNSGTICKRARGDGNQDYCTGITPDCPRN -----1-------------2----32--1--------4-----------3------4--- RYNV ---- >RIBONUCLEASE 4; SWP:P34096; PDB:1RNFA; MQDGMYQRFLRQHVHPEETGGSDRYCNLMMQRRKMTLYHCKRFNTFIHEDIWNIRSICST -------------------------1-------------2-----------------3-- TNIQCKNGKMNCHEGVVKVTDCRDTGSSRAPNCRYRAIASTRRVVIACEGNPQVPVHFDG ----4------4---------1----------2--------------3------------ >HYPOTHETICAL PROTEIN ORF9; SWP:Q54324; PDB:1RO2A; SSERIRYAKWMLEHGFNIIPIDPESKKPVLKEWQKYSHEMPSDEEKQRFLKMIEEGYNYA ------------------------------------------------------------ IPGGQKGMVIMDFESKEKLKAWIGESALEELCRKTLCTNTVHGGIHIYVLSNDIPPHKIN -------------------------------1----1----------------------- PLFEENGKGIIDLQSYNSYVLGLGSCVNHLHCTTDKCPWKEQNYTTCYTLYNELKEISKV -------------------------2-----3----3---------2------------- DLKSLLRFLAEKGKRLGITLSKTAKEWLEG ------------------------------ >CYSTATIN D; SWP:P28325; PDB:1ROAA; GGIHATDLNDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNYYFNVKFG ------------------------------------------------------------ RTTCTKSQPNLDNCPFNDQPKLKEEEFCSFQINEVPWEDKISILNYKCRKV ---1---------1-------------2-------------------2--- >CHIMERIC PROTEIN OF INTER; SWP:P10145; PDB:1RODA; SAKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPASPIVKK ------1-2------------------------1---------------2---------- IIEKMLNSDKSN ------------ >PANCREATIC LIPASE RELATED; SWP:P06857; PDB:1RP1; KEVCYEQIGCFSDAEPWAGTAIRPLKVLPWSPERIGTRFLLYTNKNPNNFQTLLPS ---1-----1---------------------------------------------- >Hypothetical 65.0 kDa pro; SWP:Q03103; PDB:1RP4A; GSFNELNAINENIRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDW ------------------------------------1---------2----2-------- DTLPEYWQPEILGSFNNDTKEADDSDDECKFLDQLCQTSKKPVDIEDTINYCDVNDFNGK ----------------------------3------4---------------3-------- NAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTIGETGESLAKDAFYRLVSGFHASI ------------------------------------------------------------ GTHLSKEYLNTKTGKWEPNLDLFARIGNFPDRVTNYFNYAVVAKALWKIQPYLPEFSFCD ----------------------------------------------------------4- LVNKEIKNKDNVISQLDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIDCVQCDRCRLW --------------------------------------------------1--5--5--- GKIQTTGYATALKILFEINDADEFTKQHIVGKLTKYELIALLQTFGRLSESIESVNFEKY ------------------------------------------------------------ GKRLLER ------- >PROSTATIC ACID PHOSPHATAS; SWP:P20646; PDB:1RPA; KELKFVTLVFRHGDRGPIETFPNDPIKESSWPQGFGQLTKWGMGQHYELGSYIRRRYGRF ------------------------------------------------------------ LNNSYKHDQVYIRSTDVDRTLMSAMTNLAALFPPEGNSIWNPRLLWQPIPVHTVSLSEDR ------------------------------------------------------------ LLYLPFRDCPRFQELKSETLKSEEFLKRLQPYKSFIDTLPSLSGFEDQDLFEIWSRLYDP --------1--------------------------------------------------- LYCESVHNFTLPTWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGVLVNEILKNMK ------------------------------------------------------------ LATQPQKARKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQDNGGHFVEMYYR ------------------------------------------------------------ NETQNEPYPLTLPGCTHSCPLEKFAELLDPVIPQDWATECMG --------------2---2--------------------1-- >THAUMATIN I; SWP:P02883; PDB:1RQWA; ATFEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYFDD --------1----------------------------------------------2---- SGSGICKTGDCGGLLRCKRFGRPPTTLAEFSLNQYGKDYIDISNIKGFNVPMDFSPTTRG -----2----3-----3------------------------------------------- CRGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDA 4----5-------6----------6---7--------78----8------------5--- FSYVLDKPTTVTCPGSSNYRVTFCPTA ------------4----------1--- >RIBONUCLEASE; SWP:P00684; PDB:1RRAA; AESSADKFKRQHMDTEGPSKSSPTYCNQMMKRQGMTKGSCKPVNTFVHEPLEDVQAICSQ -------------------------1-------------2-----------------3-- GQVTCKNGRNNCHKSSSTLRITDCRLKGSSKYPNCDYTTTDSQKHIIIACDGNPYVPVHF ----4------4-----------1----------2--------------3---------- DASV ---- >ATP-DEPENDENT PROTEASE LA; SWP:P08177; PDB:1RREA; RVGQVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVQESIQAALTVVRARAEKLGI -----------------------1------------------------------------ NPDFYEKRDIHVHVPEGATPKDGPAAGIACTALVSCLTGNPVRADVATGEITLRGQVLPI -----------------------------------1------------------------ GGLKEKLLAAHRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEP ----------------------------------------------------------- >FMS1 PROTEIN; SWP:P50264; PDB:1RSGA; PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASW ------------------------------------------------------------ HHDTLTNPLFLEEAQLSLNDGRTRFVFDDDNFIYIDEERGRVDHDKELLLEIVDNESKFA ------------------------------------------------------------ ELEFDCSFFQLVKYLLQRRQFLTNDQIRYLPQLCRYLELWHGLDWKLLSAKDTYFGHQGR ------------------------------------------------------------ NAFALNYDSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVP --------------------------1----------------1---------------- QSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNESSKIV ------------------------------------------------------------ TLANSTNEFVEIVRNAENLDELDSLSVTCWSQPLFFVNLSKSTGVASFLQAPLTNHIESI ------------------------------------------------------------ REDKERLFSFFQPVLNKIKCLDSEDVIDGRANKPVLRNIIVSNWTRDPYSRGAYSACFPV --------------------------------------------------------2--- DVVASNGQDSRIRFAGEHTIDGAGCAYGAWESGRREATRISDLLKLEHHH ------------------------2------------------------- >BACTERIAL LEUCYL AMINOPEP; SWP:Q01693; PDB:1RTQA; MPPITQQATVTAWLPQVDASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASL ------------------------------------------------------------ PNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDDAS ------------------------------------------------------------ GIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEVGLRGSQDLANQYKSEGKNVVSALQLDM ------------------------------------------------------------ TNYKGSAQDVVFITDYTDSNFTQYLTQLMDEYLPSLTYGFDTCGYACSDHASWHNAGYPA ------------------------------------------1---1------------- AMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGSATG --------------------------------------------------- >RIBONUCLEASE U2; SWP:P00654; PDB:1RTU; CDIPQSTNCGGNVYSNDDINTAIQGALDDVANGDRPDNYPHQYYEASEDITLCCGSGPWS 1-------2-------------------------------------------13------ EFPLVYNGPYYSSRDNYVSPGPDRVIYQTNTGEFCATVTHTGAASYDGFTQCS ----------------------------------3----------------2- >ACETYL-COA SYNTHASE; SWP:P83789; PDB:1RU3A; INFDQIFEGAIEPGKEPKRLFKEVYEGAITATSYAEILLSRAIEKYGPDHPVGYPDTAYF ------------------------------------------------------------ LPVIRAFSGEEVRTLKDMVPILNRMRAQIKSELTFENARLAGEATWYAAEIIEALRYLKH ------------------------------------------------------------ TPENPIVVPPWTGFIGDPVVRQYGIKMVDWTIPGEAIIIGRAKDSKAAKKIVDDLMGKGL ------------------------------------------------------------ MLFLCDEIIEQLLEENVKLGVDYIAYPLGNFTQVVHAANYALRAGLMFGGIAPGLRDAHR ------------------------------------------------------------ DYQRRRVLAFVLYLGEHDMVKTAAAMGAIFTGFPVITDQPLPEDKQIKDWFISEPDYDKI ------------------------------------------------------------ VQTALEVRGIKITSIDIDLPINFGPAFEGESIRKGDMHVEFGGGKTPSFELVRMVGPDEI ------------------------------------------------------------ EDGKVEVIGPDIDSVEPGGRLPIGIVVDIYGRKMQEDFEPVLERRIHYFTNYGEGFWHTA ------------------------------------------------------------ QRDLTWVRISKEAFAKGARLKHLGQLLYAKFKQEFPSIVDRVQVTIYTDEQKVLELREIA ------------------------------------------------------------ RKKYAERDARLRELSDEAVDTYYSCLLCQSFAPTHVCIVSPERVGLCGAISWLDAKAAYE ------------------------------------------------------------ INPNGPNQPIPKEGLIDPVKGQWESFNEYIYKNSQRTIERMNLYTIMEYPMTSCGCFEAI -----------------------------------------------------1-1---- MAYLPELNGFMIVNREHSGMTPIGMTFSTLAGMVGGGTQTPGFMGIGKSYIGSRKFVKAD ------------------------------------------------------------ GGLARVVWMPKDLKEQLRSIIEERAEEEGLGRDFIDKIADETVGTTVDEVLPFLEEKGHP ------------------------------------------------------------ ALSMEPLL -------- >PECTATE LYASE; SWP:P0C1A6; PDB:1RU4A; ADCSSDLTSGISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAVNPGELILLKPGTYTI --1--------------------------------------------------------- PYTQGKGNTITFNKSGKDGAPIYVAAANCGRAVFDFSFPDSQWVQASYGFYVTGDYWYFK ----------------------------1------------------------------- GVEVTRAGYQGAYVIGSHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNG ------------------------------------------------------------ SMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIENSWAFRNGINYWNDSAF ------------------------------------------------------------ AGNGNGFKLGGNQAVGNHRITRSVAFGNVSKGFDQNNNAGGVTVINNTSYKNGINYGFGS ------------------------------------------------------------ NVQSGQKHYFRNNVSLSASVTVSNADAKSNSWDTGPAASASDFVSLDTSLATVSRDNDGT ------------------------------------------------------------ LPETSLFRLSANSKLINAGTKESNISYSGSAPDLGAFERN ---------------------------------------- >Hemagglutinin [Precursor]; SWP:P26562; PDB:1RV0I; GLFGAIAGFIEGGWTGLIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMN ------------------------------------------------------------ TQFTAVGKEFNNLERRIKNLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYE ------------------------------------------------------------ KARSQLRNNAKEIGNGCFEFYHKCDDACMESVRNGTYDYP -----------------------1---1------------ >PROTEIN TYROSINE PHOSPHAT; SWP:NA; PDB:1RXDA; PVEVTYKNRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWP ---------------------------------------1-------------------- FGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGKYEDAVQF --------------------------------1--------------------------- IRQKRRGAFNSKQLLYLEKYRPKRLRF --------------------------- >AFIMBRIAL ADHESIN AFA-III; SWP:Q57254; PDB:1RXLA; EECQVRVGDLTVAKTRGQLTDAAPIGPVTVQALGCNARQVALKADTDNFEQGKFFLISDN --1-------------------------------1------------------------- NRDKLYVNIRPMDNSAWTTDNGVFYKNDVGSWGGTIGIYVDGQQTNTPPGNYTLTLTGGY ------------------------------------------------------------ WAKDNKQGFTPSGTTGTTKLTVT ----------------------- >Fibroblast growth factor ; SWP:P22607; PDB:1RY7B; APYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQ ------------------------------------------------------------ QWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGS ------------------------------------------------------------ DVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNV -----1------------------------------------------------------ TFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEEE ---------1----------------------- >SEROTRANSFERRIN; SWP:P02787; PDB:1RYOA; KTVRWCAVSEHEATKCQSFRDHMKSVIPSDGPSVACVKKASYLDCIRAIAANEADAVTLD -----1---------2-------------------2--------1--------------- AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKKDSGFQMNQLRGKKSCHTGLG ------------------------------------------------------3----- RSAGWNIPIGLLYCDLPEPRKPLEKAVANFFSGSCAPCADGTDFPQLCQLCPGCGCSTLN ----------------------------------4--5---------6--4--6-5---- QYFGYSGAFKCLKDGAGDVAFVKHSTIFENLANKADRDQYELLCLDNTRKPVDEYKDCHL ----------3--------------------------------7-------------7-- AQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSPHGKDLLFKDSAHGFL ------------------------------------------------------------ KVPPRMDAKMYLGYEYVTAIRNLR ------------------------ >NONSPECIFIC LIPID TRANSFE; SWP:P23096; PDB:1RZL; ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKG --1---------2-------------23-------------------4-1---------- LNAGNAASIPSKCGVSVPYTISASIDCSRVS ------------3-------------4---- >Agglutinin [Precursor]; SWP:P06750; PDB:1RZOB; ADVCMDPEPIVRIVGRNGLCVDVTGEEFFDGNPIQLWPCKSNTDWNQLWTLRKDSTIRSN -------------------1------------------1--------------------- GKCLTISKSSPRQQVVIYNCSTATVGATRWQIWDNRTIINPRSGLVLAATSGNSGTKLTV --2----------------2---------------------------------------- QTNIYAVSQGWLPTNNTQPFVTTIVGLYGMCLQANSGKVWLEDCTSEKAEQQWALYADGS ------------------------------3------------3---------------- IRPQQNRDNCLTTDANIKGTVVKILSCGPASSGQRWMFKNDGTILNLYNGLVLDVRRSDP ---------4----------------4--------------------------------- SLKQIIVHPFHGNLNQIWLPLF ---------------------- >TRANSLATION INITIATION FA; SWP:Q58657; PDB:1S0UA; SQAEVNIGMVGHVDHGKTSLTKALTGVWTDRGISIRLGYADCEIRKCPQCGTYTTKPRCP -------------------------------------------------1---------- NCLAETEFLRRVSFVDSPGHETLMATMLSGASLMDGAILVIAANEPCPQPQTKEHLMALE -1---------------------------------------------------------- ILGIDKIIIVQNKIDLVDEKQAEENYEQIKEFVKGTIAENAPIIPINIDVLLKAIQDFIP ------------------------------------------------------------ TPKRDPDATPRMYVARSFDINKPGTEIKDLKGGVLGGAIIQGVFKVGDEIEIRPGIKVTE ------------------------------------------------------------ GNKTFWKPLTTKIVSLAAGNTILRKAHPGGLIGVGTTLDPYLTKSDALTGSVVGLPGTLP ------------------------------------------------------------ PIREKITIRANLLDRVVGTKEELKIEPLRTGEVLMLNIGTATTAGVITSARGDIADIKLK ------------------------------------------------------------ LPICAEIGDRVAISRRVGSRWRLIGYGTIEG ------------------------------- >NADH-UBIQUINONE OXIDOREDU; SWP:O43678; PDB:1S3AA; GLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQE ---------1---------------------------------1---------------- TNVPLNNFSADQVTRALENVLSGKA ------------------------- >HU3S193 FAB FRAGMENT, LIG; SWP:NA; PDB:1S3KH; EVQLVESGGGVVQPGRSLRLSCSTSGFTFSDYYMYWVRQAPGKGLEWVAYMSNVGAITDY ---------------------1-------------------------------------- PDTVKGRFTISRDNSKNTLFLQMDSLRPEDTGVYFCARGTRDGSWFAYWGQGTPVTVSSA -----------------------------------1------------------------ STKGPSVFPLAPGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSV ------------------2----------------------------------------- VTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP --------------2----------------- >HU3S193 FAB FRAGMENT, LIG; SWP:NA; PDB:1S3KL; DIQMTQSPSSLSASVGDRVTITCRSSQRIVHSNGNTYLEWYQQTPGKAPKLLIYKVSNRF ----------------------1------------------------------------- SGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCFQGSHVPFTFGQGTKLQITRTVAAPSV --------------------------------1--------------------------- FIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSL ------------------2----------------------------------------- SSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR ------------------2----------------- >GLYCOLIPID 2-ALPHA-MANNOS; SWP:P27809; PDB:1S4NA; KTTMDYITPSFKAGKPKACYVTLVRNKELKGLLSSIKYVENKINKKFPYPWVFLNDEPFT ------------------------------------------------------------ EEFKEAVTKAVSSEVKFGILPKEHWSYPEWINQTKAAEIRADAATKYIYGGSESYRHMCR ------------------------------------------------------------ YQSGFFWRHELLEEYDWYWRVEPDIKLYCDINYDVFKWMQENEKVYGFTVSIHEYEVTIP ----------------------------1------------------------------- TLWQTSMDFIKKNPEYLDENNLMSFLSNDNGKTYNLCHFWSNFEIANLNLWRSPAYREYF ------------------------------------2----------------------- DTLDHQGGFFYERWGDAPVHSIAAALFLPKDKIHYFSDIGYHHPPYDNCPLDKEVYNSNN ------------------------------------------------3----------- CECDQGNDFTFQGYSCGKEYYDAQGLVKPKNWKKFRE 1-3------------2--------------------- >CYSTEINE ENDOPEPTIDASE; SWP:O65039; PDB:1S4VA; TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD ----------------------1---------------------------------2--- QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPEND ----1--------------------------------2---------------------- ENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGTKYWT -----------------------------------3------------------------ VKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSSNN ---------------------------3---------------- >ACTIVIN RECEPTOR TYPE IIB; SWP:P27040; PDB:1S4YA; RECIYYNANWELERTNQSGLERCEGEQDKRLHCYASWRNSSGTIELVKKGCWLDDFNCYD --1-------------------2---------1-----------------2------3-- RQECVATEENPQVYFCCCEGNFCNERFTHLP ---4-----------435----5-------- >GLUTAMATE RECEPTOR 6; SWP:P42260; PDB:1S50A; SNRSLIVTTILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKY ------------------------------------------------------------ GAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKGTPI ------------------------------------------------------------ DSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRV ------------------------------------------------------------ LTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEE ---------------------1-------------------------------------- GKLHMMKEKWWRGNGCPE ---------------1-- >CHOLERA ENTEROTOXIN, A CH; SWP:P01555; PDB:1S5DA; NDDKLYRADSRPPDEIKQSGGLMPRGQSQMNINLYDHARGTTGFVRHDDGYVSTSISLRS ------------------------------------------------------------ AHLVGQTILSGHSTYYIYVIATAPNMFNVNDVLGAYSPHPDEQEVSALGGIPYSQIYGWY ------------------------------------------------------------ RVHFGVLDEQLHRNRGYRDRYYSNLDIAPAADGYGLAGFPPEHRAWREEPWIHHAPPGCG ----------------------------------------------------------1- TCDEKTQSLGVKFLDEYQSKVKRQIFSGYQSDIDTHNR -1------------------------------------ >DNA POLYMERASE I; SWP:P26811; PDB:1S5JA; EWLEEAQENKIYFLLQVDYDGKKGKAVCKLFDKETQKIYALYDNTGHKPYFLVDLEPDKV ------------------------------------------------------------ GKIPKIVRDPSFDHIETVSKIDPYTWNKFKLTKIVVRDPLAVRRLRNDVPKAYEAHIKYF ------------------------------------------------------------ NNYMYDIGLIPGMPYVVKNGKLESVYLSLDEKDVEEIKKAFADSDEMTRQMAVDWLPIFE ------------------------------------------------------------ TEIPKIKRVAIDIEVYTPVKGRIPDSQKAEFPIISIALAGSDGLKKVLVLNRNDVNEGSV ------------------------------------------------------------ KLDGISVERFNTEYELLGRFFDILLEYPIVLTFNGDDFDLPYIYFRALKLGYFPEEIPID ------------------------------------------------------------ VAGKDEAKYLAGLHIDLYKFFFNKAVRNYAFEGKYNEYNLDAVAKALLGTSKVDTLISFL ------------------------------------------------------------ DVEKLIEYNFRDAEITLQLTTFNNDLTMKLIVLFSRISRLGIEELTRTEISTWVKNLYYW ------------------------------------------------------------ EHRKRNWLIPLKEEILAKSSNAVVIDPPAGIFFNITVLDFASLYPSIIRTWNLSYETVDI ------------------------------------------------------------ QQCKKPYEVKDETGEVLHIVCMDRPGITAVITGLLRDFRVKIYKKKAKNPNNSEEQKLLY --1-----------------1--------------------------------------- DVVQRAMKVFINATYGVFGAETFPLYAPRVAESVTALGRYVITSTVKKAREEGLTVLYGD ------------------------------------------------------------ TDSLFLLNPPKNSLENIIKWVKTTFNLDLEVDKTYKFVAFSNYFGVYQDGKVDIKGMLVV ------------------------------------------------------------ KKVFNEVKELMISINSPNDVKEIKRKIVDVVKGSYEKLKIDAEKYLEALRSTFEQILRAF ------------------------------------------------------------ GVSWDEI ------- >TOLA PROTEIN; SWP:P19934; PDB:1S62A; AEFGNTKNNGASGADINNYAGQIKSAIESKFYDASSYAGKTCTLRIKLAPDGMLLDIKPE -----------------------------------------1------------------ GGDPALCQAALAAAKLAKIPKPPSQAVYEVFKNAPLDFKPHH ------1----------------------------------- >PHOSPHOLIPASE A2 ISOFORM ; SWP:P60043; PDB:1S6BA; NTYQFKNMIQCTVPKRSWWDFADYGCYCGRGGSGTPIDDLDRCCQVHDNCYNSAREQGGC ----------1--------------2-3--------------43-----5---------6 RPKQKTYSYECKAGTLSCSGSNNSCAATVCDCDRLAAICFAGAPYNDNNYNIDLKARCQ ----------1------7------6----7-5------4------------------2- >Phospholipase A2 isoform ; SWP:P60044; PDB:1S6BB; NRWQFKNMISCTVPSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKISGC ----------1--------------2-3--------------43-----5---------6 NPRFRTYSYECTAGTLTCTGRNNACAASVCDCDRLAAICFAGAPYNDNNYNIDLQARCN ----------1------7------6----7-5------4------------------2- >ENVELOPE GLYCOPROTEIN; SWP:Q913C7; PDB:1S6NA; ISEFQLKGTTYGVCSKAFKFLGTPADTGHGTVVLELQYTGTDGPCKVPISSVASLNDLTP -------------1------------------------------1--------------- VGRLVTVNPFVSVATANAKVLIELEPPFGDSYIVVGRGEQQINHHWHKSGSSIGK ------------------------------------------------------- >KVAP CHANNEL; SWP:P60980; PDB:1S6XA; ECGKFMWKCKNSNDCCKDLVCSSRWKWCVLASPF -1------2-----31----2------3------ >PHOSPHOLIPASE A2 HOMOLOG; SWP:P49121; PDB:1S8IA; SLLELGKMILQETGKNAITSYGSYGCNCGWGHRGQPKDATDRCCFVHKCCYKKLTDCNHK -------------------------1-2--------------32----45------6--- TDRYSYSWKNKAIICEEKNPCLKEMCECDKAVAICLRENLDTYNKKYKAYFKFKCKKPET --------------7-----6----7-5------3-------------------1----- C 4 >TOXIN BMKK4; SWP:Q95NJ8; PDB:1S8KA; TQCQSVRDCQQYCLTPDRCSYGTCYCKTT --1-----2---3-----1----2-3--- >HLA class II histocompati; SWP:P01918; PDB:1S9VB; SPEDFVYQFKGMCYFTNGTERVRLVSRSIYNREEIVRFDSDVGEFRAVTLLGLPAAEYWN ------------1----------------------------------------------- SQKDILERKRAAVDRVCRHNYQLELRTTLQRRVEPTVTISPSRNLLVCSVTDFYPAQIKV ----------------1------------------------------2------------ RWFRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWR -------------------------------------------2---------------- A - >SERUM AMYLOID P COMPONENT; SWP:P02743; PDB:1SACA; HTDLSGKVFVFPRESVTDHVNLITPLEKPLQNFTLCFRAYSDLSRAYSLFSYNTQGRDNE -----------------------------------1------------------------ LLVYKERVGEYSLYIGRHKVTSKVIEKFPAPVHICVSWESSSGIAEFWINGTPLVKKGLR ----------------------------------1------------------------- QGYFVEAQPKIVLGQEQDSYGGKFDRSQSFVGEIGDLYMWDSVLPPENILSAYQGTPLPA ------------------------------------------------------------ NILDWQALNYEIRGYVIIKPLVWV ------------------------ >sulfite reductase, desulf; SWP:O28055; PDB:1SAUA; PELEVKGKKLRLDEDGFLQDWEEWDEEVAEALAKDTRFSPQPIELTEEHWKIIRYLRDYF ------------------------------------------------------------ IKYGVAPPVRMLVKHCKKEVRPDCNLQYIYKLFPQGPAKDACRIAGLPKPTGCV ---------------1-------1------------------------------ >RHODOCETIN ALPHA SUBUNIT; SWP:P81397; PDB:1SB2A; DCPDGWSSTKSYCYRPFKEKKTWEEAERFCTEQEKEAHLVSMENRLEAVFVDMVMENNFE -1----------1----------------2------------------------------ NKIYRSWIGLKIENKGQRSNLEWSDGSSISYENLYEPYMEKCFLMDHQSGLPKWHTADCE -----------------------------------------3----------------3- EKNVFMCKFQLP ------2----- >Rhodocetin subunit beta; SWP:P81398; PDB:1SB2B; FRCPTTWSASKLYCYKPFKEKKTWIEAERFCAKQAENGHLVSIGSAAEADFLDLVIVVNF --1----------1----------------2----------------------------- RYRAWTGLTERNLKWTNGASVSYENLYEPYIRKCFVVQPWEGKSKWYKADCEEKNAFLCK ---------------------------------3----------------3-------2- FPKP ---- >Putative uncharacterized ; SWP:Q52L64; PDB:1SBSH; EVNLEESGGGLVQPGGSMKLSCVASGFTFSNYWMNWVRQSPEKGLEWVADIRLKSNNYAT ---------------------1-------------------------------------- LYAESVKGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTRGAYYRYDYAMDYWGQGTSVT -------------------------------------1---------------------- VSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVL -----------------------------2------------------------------ QSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVP ------------------------2----------------- >STEM CELL FACTOR; SWP:P21583; PDB:1SCFA; NVKDVTKLVANLPKDYITLKYVPGDVLPSHCWISEVVQLSDSLTDLLDKFSNISEGLSNY ------------------------------1----------------------------- SIIDKLVNIVDDLVECVKSPEPRLFTPEEFFRIFNRSIDAFKDFVVASETSDCVVS ----------------------------------------------------1--- >PEANUT PEROXIDASE, MAJOR ; SWP:P22195; PDB:1SCHA; LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF ---------1--------------------------------2----2------------ TGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLL -----------------------------1-----3------------------------ GRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRT ------------------------------------------------------4----- RIYNESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLHSDQQ -------------------4---------------------------------------- LFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN ------------------------------------------------3---- >SCORPION TOXIN OSK1; SWP:P55896; PDB:1SCO; GVIINVKCKISRQCLEPCKKAGMRFGKCMNGKCHCTPK -------1-----2---3---------1----2-3--- >SCYLLATOXIN; SWP:P16341; PDB:1SCY; AFCNLRMCQLSCRSLGLLGKCIGDKCECVKH --1----2---3--------1----2-3--- >COAGULATION FACTOR V; SWP:Q28107; PDB:1SDDA; AKLRQFYVAAQSIRWNTSFKKIVYREYEAYFQKEKPQSRTSGLLGPTLYAEVGDIMKVHF ------------------------------------------------------------ KNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTH ------------------------------------------------------------ DDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESK ----1-------------------------1----------------------------- SWNQTSSLMYTVNGYVNGTMPDITVCAHLIGMSSGPELFSIHFNGQVLEQNHHKISAITL ------------------------------------------------------------ VSATSTTGRWTIASLIPRHFQAGMQAYI ---------------------------- >AAH2: LQH-ALPHA-IT (FACE); SWP:P01484; PDB:1SEGA; VKDGYIVKNYNCTYFCFRNAYCNEECTKLKGESGYCQWASPYGNACYCYKLPDHVPIRVP -----------1---2-----3---4---------2---------3-4------------ GKCH --1- >THIOREDOXIN-LIKE PROTEIN ; SWP:O95881; PDB:1SENA; LGKGFGDHIHWRTLEDGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNF ------------------------------------1--1-------------------- VMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQ ------------------------------------------------------------ GMKEAQERLTGDAFR --------------- >ASFP; SWP:P29392; PDB:1SFP; LPRNTNCGGILKEESGVIATYYGPKTNCVWTIQMPPEYHVRVSIQYLQLNCNKESLEIID ------1--------------------1----------------------2--------- GLPGSPVLGKICEGSLMDYRSSGSIMTVKYIREPEHPASFYEVLYFQDPQA -----------2--------------------------------------- >ANTIGEN 85-A; SWP:P17944; PDB:1SFRA; AFSRPGLPVEYLQVPSPSMGRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINTPAFE ------------------------------------------------------------ WYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTG ---------------------------1----1--------------------------- SAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDM ------------------------------------------------------------ WGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIK ------------------------------------------------------------ FQDAYNAGGGHNGVFDFPDSGTHSWEYWGAQLNAMKPDLQRALGATPN ------------------------------------------------ >HYPOTHETICAL PROTEIN; SWP:P84136; PDB:1SFSA; GIWGVDSAQVVTDQLFQCVRTELGYPKFWGRYLSEVPNVSEGLTRDEIVRIRNYGVKVLP -----------------1------------------------------------------ IYNAFREAVGYANGQVAARNAVFHARRLGIPKNKLLFANIEDFFAVDAAWIAAWVETLYP ------------------------------------------------------------ TGYRPGLYADPTKGDFAAAYCEAVSRNNQVAVQAVIWSAAPRPGTTKEQKAPRYQPAAPP --------------------2--------------------------------------- CSANVWVWQYGRDAEVCPVDTNLADRRLLDFLY 2---------------1---------------- >Tumor necrosis factor rec; SWP:P07174; PDB:1SG1X; ETCSTGLYTHSGECCKACNLGEGVAQPCGANQTVCEPCLDNVTFSDVVSATEPCKPCTEC --1----------12--3---------2------3--4---------------4--5--6 LGLQSMSAPCVEADDAVCRCAYGYYQDEETGHCEACSVCEVGSGLVFSCQDKQNTVCEEC ---------5-------6-7------------7--8--9---------8-------9--a PEGTYSDEANHVDPCLPCTVCEDTERQLRECTPWADAECE --------------a--b--c---------b-------c- >NERVE GROWTH FACTOR; SWP:P00757; PDB:1SGFA; NSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKEEPSDQHRLVSKAIPH ----------------1---------------1--------------------------- PDFNMSLLPQP ----------- >TRICHOMAGLIN; SWP:P84146; PDB:1SGLA; EFDYFILALQWAGTSCRSGGACCPYNGCCKADSPTQFTIHGLRPEYSGGERPSCCTGGSF ---------------1-----23----12------------------------45----- DPDEIMPFFGKLVEYWPTYRCALEQSCNNRKEILWGQQYEKHGTCASPVIKGEWNYFKKT --------------------3-----4-----------------5--------------- LKLFMKYNVDKALEDAGIVASNSKMYDLKDIVVAVESAVGARPKLRCDEEGLVQKLSLCF ----------------------------------------------6-----------7- DKDFKPRDCVQVGSCPRYVSL --------7-----6------ >EXTRACELLULAR SUBTILISIN-; SWP:Q8GB52; PDB:1SH7A; QSNAIWGLDRIDQRNLPLDRNYNANFDGFGVTAYVIDTGVNNNHEEFGGRSVSGYDFVDN ------------------------------------------------------------ DADSSDCNGHGTHVAGTIGGSQYGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNAS ------1-------------------------------1--------------------- GPSVANMSLGGGQSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTT ------------------------------------------2----------------- SSDSRSSFSNWGSCVDLFAPGSQIKSAWYDGGYKTISGTSMATPHVAGVAALYLQENNGL -------------2---------------------------------------------- TPLQLTGLLNSRASENKVSDTRGTTNKLLYSLADSGCEPDC ------------------------------------3---3 >NEUROTOXIN I; SWP:P19651; PDB:1SHI; AACKCDDEGPDIRTAPLTGTVDLGSCNAGWEKCASYYTIIADCCRKKK --1-2--------------------3------2---------13---- >TRYPSIN INHIBITOR; SWP:P31713; PDB:1SHP; SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICRA --1--------2---------------3-------2------------3---1-- >Anthrax toxin receptor 2 ; SWP:P58335; PDB:1SHUX; SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTG -1---------------------------------------------------------- DRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPS ------------------------------------------------------------ YAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQS ------------------------------------------------------------ C 1 >EPHRIN-A5; SWP:O08543; PDB:1SHXA; VADRYAVYWNSSNPRFQRGDYHIDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGY -------------------------1--------2------------------------- SACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFEFRPGREYFYISSAIPDNG --3-----------2--------------------------------------------- RRSCLKLKVFVRPTNSCM ---3------------1- >Hepatocyte growth factor ; SWP:P08581; PDB:1SHYB; KYQLPNFTAETPIQNVILHEHHIFLGATNYIYVLNEEDLQKVAEYKTGPVLEHPDCFPCQ -------------------------------------------------------1--2- DCSSKANLSGGVWKDNINMALVVDTYYDDQLISCGSVNRGTCQRHVFPHNHTADIQSEVH -1-------------------------------3-------3------------------ CIFSPQIEEPSQCPDCVVSALGAKVLSSVKDRFINFFVGNTINSSYFPDHPLHSISVRRL 2-----------4--4-------------------------------------------- KETKDGFMFLTDQSYIDVLPEFRDSYPIKYVHAFESNNFIYFLTVQRETLDAQTFHTRII ------------------------------------------------------------ RFCSINSGLHSYMEMPLECILTKEVFNILQAAYVSKPGAQLARQIGASLNDDILFGVFAQ ------------------5----------------------------------------- SKPDSAEPMDRSAMCAFPIKYVNDFFNKINVRCLQHFYGPNHEHCFNRDEYRTEFTTALQ --------------5-----------------6-----------6--------------- RVDLFMGQFSEVLLTSISTFIKGDLTIANLGTSEGRFMQVVVSRSGPSTPHVNFLLDSHP ------------------------------------------------------------ VSPEVIVEHTLNQNGYTLVITGKKITKIPLNGLGCRHFQSCSQCLSAPPFVQCGWCHDKC ----------------------------------7-----8--9--------7--a---9 VRSEECLSGTWTQQICLPA -----a---------8--- >Hepatocyte growth factor ; SWP:P14210; PDB:1SI5H; VVNGIPTRTNIGWMVSLRYRNKHICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDVH ------------------------1---------------1------------------- GRGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSV ---------------------------------------------------------2-- YGWGYTGLINYDGLLRVAHLYIMGNEKCSQLNESEICAGAEKIGSGPCEGDYGGPLVCEQ ---------------------------3--------3----------4---------2-- HKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIILTYKVPQS ---------------4------------------------------- >SCORPION INSECTOTOXIN I5A; SWP:P15222; PDB:1SIS; MCMPCFTTDPNMAKKCRDCCGGNGKCFGPQCLCNR -1--2----------3--14-----2----3-4-- >NONSPECIFIC LIPID-TRANSFE; SWP:P83434; PDB:1SIYA; MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRG --1---------2-------------23-------------------4-1---------- INPNNAEALPGKCGVNIPYKISTSTNCNSIN ------------3-------------4---- >FERREDOXIN; SWP:P29603; PDB:1SJ1A; AWKVSVDQDTCIGDAICASLCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSA --------------------1--------------------------1------------ ITIEEA ------ >IMMUNOGLOBULIN VH DOMAIN; SWP:NA; PDB:1SJXA; QVQLQESGGGLVQAGGSLRLSCQASGNIFRINDMGWYRQAPGTQRELVAAITSGGSTKYA ---------------------1-------------------------------------- DSVKGRFTISKDNAKNTVYLQMNSLKPEDTAVYYCAAEDRHRIGTVGYWGQGTQVTVSS ----------------------------------1------------------------ >PEPTIDOGLYCAN RECOGNITION; SWP:Q96LB9; PDB:1SK4A; PNIIKRSAWEARETHCPKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFC ---------------1-------------------2-----2-----------------1 DIGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFIGYFVEKPPNAAALEAAQDLI ------------------------------------------------------------ QAVVEGYLTPNYLLMGHSDVVNILSPGQALYNIISTWPHFKH ------------------------------------------ >ANTISTASIN; SWP:P15358; PDB:1SKZ; GCEEAGCPEGSACNIITDRCTCSGVRCRVHCPHGFQRSRYGCEFCKCRLEPMKATCDISE -1----2-----1------2-3----4---5----------3--4-5--------6---- CPEGMMCSRLTNKCDCKIDINCRKTCPNGLKRDKLGCEYCECRP 7-----6------7-8-----9---a----------8--9-a-- >MDC-SIGN1B TYPE I ISOFORM; SWP:Q9NNX6; PDB:1SL4A; CHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNR 1--2----------2----------------3---------------------------- FTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEEDCAEFSGNGWNDDKCNLA -------------------------------------------4------------4--- KFWICKKSAASC ----3------1 >ECOTIN; SWP:P23827; PDB:1SLUA; IAPYPQAEKGMKRQVIQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLENKTLEGWGY ----------------------------------------1------------------- DYYVFDKVSSPVSTMMHCPDKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWK -----------------1------------------------------------------ AEEKIDNAVVR ----------- >RECOMBINANT IB PRONAPIN; SWP:Q8GT96; PDB:1SM7A; QPQKCQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCV ----1------------2-----------------------------23---------1- CPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTCPFIAI 4----------------------------------3-------4----- >AMYLASE; SWP:P04745; PDB:1SMD; YSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAIHNPFRPWWER --------------------------1--------------------------------- YQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGNAVSAGTSSTCGSYFNP --------2---------------1----------------------------2------ GSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGLLDLALGKDYVRSKIAE -------------------3------------------3--------------------- YMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEGSKPFIYQEVIDLGGEP ------------------------------------------------------------ IKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWGFMPSDRALVFVDNHDN ------------------------------------------------------------ QRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWPRYFENGKDVNDWVGPP ------------------------------------------------------------ NDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQPFTNWYDNGSNQVAFGR ----------------4-----4------------------------------------- GNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGIKIYVSDDGKAHFSISN ----------------------------5-----------5------------------- SAEDPFIAIHAESKL --------------- >TRIGGERING RECEPTOR EXPRE; SWP:Q9NP99; PDB:1SMOA; ATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPV --------------------1--------------------------------------- QVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVV --------------------------------1-------------------- >Proteinase inhibitor [Pre; SWP:P18958; PDB:1SMPI; SSLRLPSAAELSGQWVLSGAEQHCDIRLNTDVLDGTTWKLAGDTACLQKLLPEAPVGWRP -----------------------1---------------------1-------------- TPDGLTLTQADGSAVAFFSRNRDRYEHKLVDGSVRTLKKK ---------------------------------------- >SESBANIA MOSAIC VIRUS COA; SWP:Q9EB06; PDB:1SMVA; GAITVLHCELTAEIGVTDSIVVSSELVMPYTVGTWLRGVADNWSKYSWLSVRYTYIPSCP ------------------------------------------------------------ SSTAGSIHMGFQYDMADTVPVSVNKLSNLRGYVSGQVWSGSAGLCFINNSRCSDTSTAIS --------------------------------------------1------1-------- TTLDVSELGKKWYPYKTSADYATAVGVDVNIATDLVPARLVIALLDGSSSTAVAAGRIYD ------------------------------------------------------------ TYTIQMIEPTASALNL ---------------- >NEUROTOXIN BMK M4; SWP:P45698; PDB:1SN4A; VRDAYIAKPENCVYHCAGNEGCNKLCTDNGAESGYCQWGGRYGNACWCIKLPDDVPIRVP -----------1---2-----3---4---------2---------3-4------------ GKCH --1- >NEUROTOXIN BMK M8; SWP:P54135; PDB:1SNB; GRDAYIADSENCTYFCGSNPYCNDVCTENGAKSGYCQWAGRYGNACYCIDLPASERIKEG -----------1---2-----3---4---------2---------3-4------------ GRCG --1- >SIALIDASE 2; SWP:Q9Y3R4; PDB:1SO7A; LPVLQKESVFQSGAHAYRIPALLYLPGQQSLLAFAEQRAELIVLRRGDYDAPTHQVQWQA ------------------------------------------------------------ QEVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTST -----------------1------------------------------------------ DHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLNDRARSLVVPAYAYRKLHPIQRP ---------------------------------1-------------------------- IPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETQRVVTLNARSHLRARVQAQSTNDG ------------------------------------------------------------ LDFQESQLVKKLVEPPPQGCQGSVISFPSPRSPAQWLLYTHPTHSWQRADLGAYLNPRPP ------------------------------------------------------------ APEAWSEPVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYEEIVFLMFTLKQAFPAE ------------------------------------------------------------ Y - >4-HYDROXYPHENYLPYRUVATE D; SWP:NA; PDB:1SP8A; RFNPRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG ------------------------------------------------------------ SLSFLFTAPYAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAA ------------------------------------------------------------ GARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPDGAAGEPFLPGFEGVASPGAADYGLS ------------------------------------------------------------ RFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTGLNSMVLANNSENVLLPLNEPVHGTKR ------------------------------------------------------------ RSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPTSDYYDGVRRRA ------------------------------------------------------------ GDVLTEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEIIQRIGCMEKDEKGQE --------------------------------------------------1--------- YQKGGCGGFGKGNFSQLFKSIEDYEKSL -----1---------------------- >4-HYDROXYPHENYLPYRUVATE D; SWP:P93836; PDB:1SP9A; VRKNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTS ------------------------------------------------------------ GDLRFLFTAPYSPSTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAI ------------------------------------------------------------ PSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKFLPGFERVEPLDYGIRRLDHAVGNVPELG ------------------------------------------------------------ PALTYVAGFTGFHQFASGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGL ------------------------------------------------------------ QHLALMSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELG ------------------------------------------------------------ ILVDRDDQGTLLQIFTKPLGDRPTIFIEIIQRVGCMMKDEEGKAYQSGGCGGFGKGNFSE ----------------------------------1--------------1---------- LF -- >KALLIKREIN 1; SWP:P06870; PDB:1SPJA; IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCISDNYQLWLGRHNLFDDE -------------------------1---------------1------------------ NTAQFVHVSESFPHPGFNMSLLENRQA --------------------------- >MAJOR SEMINAL PLASMA GLYC; SWP:P35495; PDB:1SPPA; LDYHACGGRLTDDYGTIFTYKGPKTECVWTLQVDPKYKLLVSIPTLNLTCGKEYVEVLEG -----1--------------------1----------------------2---------- APGSKSLGKFCEGLSILNRGSSGMTVKYKRDSGHPASPYEIIFLRDSQG ----------2-------------------------------------- >Major seminal plasma glyc; SWP:P35496; PDB:1SPPB; ARINGPDECGRVIKDTSGSISNTDRQKNLCTWTILMKPDQKVRMAIPYLNLACGKEYVEV --------1--------------------1----------------------2------- FDGLLSGPSYGKLCAGAAIVFLSTANTMTIKYNRISGNSSSPFLIYFYGSSP -------------2-------------------------------------- >Novel antigen receptor [F; SWP:Q8AXI4; PDB:1SQ2N; RVDQTPRSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNS --------------------1------------2-------------------------- GSKSFSLRINDLTVEDGGTYRCGLGVAGGYCDYALCSSRYAECGDGTAVTVN ---------------------1--------2----3------3--------- >oligoxyloglucan reducing-; SWP:Q8J0D2; PDB:1SQJA; YEFKNVAIGGGGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNI ------------------------------------------------------------ MGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNG ------------------------------------------------------------ ERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGT ------------------------------------------------------------ IYASATAPQGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNF ------------------------------------------------------------ LYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVD ------------------------------------------------------------ ATNPNRLVVITLDRDPGPALDSIYLSTDAGATWKDVTQLSSPSNLEGNWGHPTNAARYKD ------------------------------------------------------------ GTPVPWLDFNNGPQWGGYGAPHGTPGLTKFGWWMSAVLIDPFNPEHLMYGTGATIWATDT ------------------------------------------------------------ LSRVEKDWAPSWYLQIDGIEENAILSLRSPKSGAALLSGIGDISGMKHDDLTKPQKMFGA ------------------------------------------------------------ PQFSNLDSIDAAGNFPNVVVRAGSSGHEYDSACARGAYATDGGDAWTIFPTCPPGMNASH --------------------------------1------------------1-------- YQGSTIAVDASGSQIVWSTKLDEQASGPWYSHDYGKTWSVPAGDLKAQTANVLSDKVQDG ------------------------------------------------------------ TFYATDGGKFFVSTDGGKSYAAKGAGLVTGTSLMPAVNPWVAGDVWVPVPEGGLFHSTDF ------------------------------------------------------------ GASFTRVGTANATLVSVGAPKAPSAVFIWGTDKPGSDIGLYRSDDNGSTWTRVNDQEHNY ------------------------------------------------------------ SGPTMIEADPKVYGRVYLGTNGRGIVYADLTNEEKSTAKCANGQKGTHCY ---------------------------------------2--------2- >CYTOLETHAL DISTENDING TOX; SWP:O06522; PDB:1SR4A; LNLLSSSGPNRQVLPSEPSNFMTLMGQNGALLTVWALAKRNWLWAYPNIYSQDFGNIRNW ------------------------------------------------------------ KMEPGKHREYFRFVNQSLGTCVEAYGNGLIHDICSLDKLAQEFELLPTDSGAVVIKSVSQ --------------------1------------1-------------------------- GRCVTYNPVSTTFYSTVTLSVCDGATEPSRDQTWYLAPPVLEATAVN --2------------------2------------------------- >Cytolethal distending tox; SWP:O06524; PDB:1SR4C; DPTTYPDVELSPPPRISLRSLLTAQPVKNDHYDSHNYLSTHWELIDYKGKEYEKLRDGGT ------------------------------------------------------------ LVQFKVVGAAKCFAFLGKGTTDCKDTDHTVFNLIPTNTGAFLIKDALLGFCITSHDFDDL -----------1----------1---------------------------2--------- KLEPCGGSVSGRTFSLAYQWGILPPFGPSKILIP ----2----------------------------- >SPARC; SWP:P09486; PDB:1SRA; PPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQKLRVKKIHENEKRLEAGDHP --1--------------------------------------------------------- VELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFET ----------------------------------------------------1------- CDLDNDKYIALDEWAGCFGIKQKDIDKDLVI 2---------------2-------------- >COPPER,ZINC SUPEROXIDE DI; SWP:P07505; PDB:1SRDA; ATKKAVAVLKGTSNVEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMST --------------------------------------------------------1--- GPHFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVH ------------------------------------------------------------ ELEDDLGKGGHELSPTTGNAGGRLACGVVGLTPV -------------------------1-------- >Gamma-aminobutyric acid t; SWP:Q9Z0U4; PDB:1SRZA; EAEFVRICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVCSQGQWST -------1------------------------------2-------------1------- PKPHCQVN ----2--- >PULMONARY SURFACTANT-ASSO; SWP:P07988; PDB:1SSZA; CWLCRALIKRIQAMIPKGGRMLPQLVCRLVLRCS 1--2----------------------2-----1- >FRUCTAN 1-EXOHYDROLASE II; SWP:Q93X60; PDB:1ST8A; QIEQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLV ------------------------------------------------------------ NWIHLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPF ------------------------------------------------------------ LREWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDF ------------------------------------------------------------ VNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFEGHDWYTI ------------------------------------------------------------ GTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQAD ------------------------------------------------------------ DIEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIA ------------------------------------------------------------ ASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLKEQS -------------------------------1---------------------------- AIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDHSII ------------------1----------------------------------------- ESFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAKFVVDQS --------------------------------------------------------- >Phosphate transport syste; SWP:Q9X256; PDB:1SUMB; NRLLNEKVEEFKKGVLKAGWFIEKMFRNSISSLVERNESLAREVIADEEVVDQMEVEIQE ------------------------------------------------------------ KAMEVLGLFSPIGKPLLTVTAGIRVAELIENIADKCHDIAKNVLELMEEPPLKPLEDIPA ------------------------------------------------------------ MANQTSEMLKFALRMFADVNVEKSFEVCRMDSKVDDLYEKVREELLLYMMESPKYVKRAL ---------------------------1-------------------------------- LLLEIAGNIEIIADYATNIVEVSVYMVQGEAYKCYHDELLLFKKS ---------------------------------1----------- >TICK-BORNE ENCEPHALITIS V; SWP:P14336; PDB:1SVB; SRCTHLENRDFVTGTQGTTRVTLVLELGGCVTITAEGKPSMDVWLDAIYQENPAKTREYC --1--------------------------1-----------------------------2 LHAKLSDTKVAARCPTMGPATLAEEHQGGTVCKRDQSDRGWGNHCGLFGKGSIVACVKAA -------------3-----------------4------------3----------4---- CEAKKKATGHVYDANKIVYTVKVEPHTGDYVAANETHSGRKTASFTISSEKTILTMGEYG 2----------------------------------------------------------- DVSLLCRVASGVDLAQTVILELDKTVEHLPTAWQVHRDWFNDLALPWKHEGAQNWNNAER -----5------------------------------------------------------ LVEFGAPHAVKMDVYNLGDQTGVLLKALAGVPVAHIEGTKYHLKSGHVTCEVGLEKLKMK -------------------------------------------------5---------- GLTYTMCDKTKFTWKRAPTDSGHDTVVMEVTFSGTKPCRIPVRAVAHGSPDVNVAMLITP ------6------------------------------6---------------------- NPTIENNGGGFIEMQLPPGDNIIYVGELSHQWFQK ----------------------------------- >NOXIUSTOXIN; SWP:P08815; PDB:1SXM; TIINVKCTSPKQCSKPCKELYGSSAGAKCMNGKCKCYNN ------1-----2---3-----------1----2-3--- >PEPTIDOGLYCAN RECOGNITION; SWP:Q9VYX7; PDB:1SXRA; CPTIKLKRQWGGKPSLGLHYQVRPIRYVVIHHTVTGECSGLLKCAEILQNMQAYHQNELD 1------------------------------------2-----2---------------- FNDISYNFLIGNDGIVYEGTGWGLRGAHTYGYNAIGTGIAFIGNFVDKLPSDAALQAAKD ------------------------------------------------------------ LLACGVQQGELSEDYALIAGSQVISTQSPGLTLYNEIQEWPHWLSNPHHHHHH ---1------------------------------------------------- >OKT3 FAB LIGHT CHAIN; SWP:P09693; PDB:1SY6A; MQSIKGNHLVKVYDYQEDGSVLLTCDAEAKNITWFKDGKMIGFLTEDKKKWNLGSNAKDP ------------------------1----------------------------------- RGMYQCKGSQNKSKPLQVYYRMQTPYKVSISGTTVILTCPQYPGSEILWQHNDKNIGGDE -----1--------------------------------2--------------------- DDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRARV ---------------------------2-------------------- >T-cell surface glycoprote; SWP:P09693; PDB:1SY6H; QVQLQQSGAELARPGASVKMSCKASGYTFTRYTMHWVKQRPGQGLEWIGYINPSRGYTNY ---------------------1-------------------------------------- NQKFKDKATLTTDKSSSTAYMQLSSLTSEDSAVYYCARYYDDHYCLDYWGQGTTLTVSSA -----------------------------------1------------------------ KTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDL -------------------------2---------------------------------- YTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR --------------------2------------------ >THIOREDOXIN; SWP:Q7KQL8; PDB:1SYRA; MVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEV -----------------------------1--1--------------------------- SEVTEKENITSMPTFKVYKNGSSVDTLLGANDSALKQLIEKYA ------------------------------------------- >mannose binding lectin-as; SWP:O00187; PDB:1SZBA; PLGPKWPEPVFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDF -------------------------------------------------------1---- VKLSSGAKVLATLCGQESTDTERAPGKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAA -------------1---------------------------------------------- EDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQ -----2---------3---2--------3-4------------4--- >HER-1 PROTEIN; SWP:P34704; PDB:1SZHA; STLTKELIKDAAEKCCTRNRQECCIEIMKFGTPIRCGYDRDPKLPGYVYKCLQNVLFAKE --------------12------32-----------3--------------1--------- PKKKINLDDSVCCSVFGNDQEDSGRRCENRCKNLMTSPSIDAATRLDSIKSCSLLDNVLY -----------45-------------6---5--------------------6-------- KCFEKCRSLRKDGIKIEVLQFEEYCEA -7---4------------------7-- >F-SPONDIN; SWP:P35446; PDB:1SZLA; GSETCIYSNWSPWSACSSSTCEKGKRMRQRMLKAQLDLSVPCPDTQDFQPCMGPGCSDED ----1----------2----3--------------------1--------2----3---- G - >ALPHA-GALACTOSIDASE; SWP:Q92456; PDB:1SZNA; IVMPDGVTGKVPSLGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMK -----------------------1-------------------------------1---- DGRVDGHIAPNATRFPDGIDGLAKKVHALGLKLGIYSTAGTATCAGYPASLGYEDVDAAD -------------------------------------------2---------------- FADWGVDYLKYDNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGYDWSTSKS -------------2------------3------------3-------------------- AERFGAMRNALAKQSHEIVLSMCIWGQADVFSWGNSTGISWRMSDDISPNWGSVTRILNL ------------------------------------------------------------ NSFKLNSVDFWGHNDADMLEVGNGNLTAAETRTHFALWAAMKSPLLIGTDLAQLSQNNIN ------------------------------------------------------------ LLKNKHLLAFNQDSVYGQPATPYKWGINPDWTFNVTYPAEFWAGPSSKGHLVLMVNTLDI ------------------------------------------------------------ TATKEAKWNEIPGLSAGHYEVRDVWSDKDLGCLSSYKAAVAAHDTAVILVGKKCQRW -------------------------------4---------------------4--- >Intercellular adhesion mo; SWP:P32942; PDB:1T0PB; QEFLLRVEPQNPVLSAGGSLFVNCSTDCPSSEKIALETSLSKELVASGMGWAAFNLSNVT -----------------------1---2-------------------------------- GNSRILCSVYCNGSQITGSSNITVYG ------1---2--------------- >INSECT NEUROTOXIN; SWP:O77091; PDB:1T0ZA; KKNGYAVDSSGKVAECLFNNYCNNECTKVYYADKGYCCLLKCYCFGLADDKPVLDIWDST ---------------1-----2---3----------14---2-3---------------- KNYCDVQIIDLS ---4-------- >NONSPECIFIC LIPID-TRANSFE; SWP:Q42952; PDB:1T12A; AITCGQVTSNLAPCLAYLRNTGPLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISG ---1---------2------------23-------------------4-1---------- INLGKAAGLPSTCGVNIPYKISPSTDCSKVQ ------------3-------------4---- >KURTOXIN; SWP:P58910; PDB:1T1TA; KIDGYPVDYWNCKRICWYNNKYCNDLCKGLKADSGYCWGWTLSCYCQGLPDNARIKRSGR -----------1---2------3---4---------2------3-4-------------- CRA 1-- >FAB NNA7 HEAVY CHAIN; SWP:NA; PDB:1T2QH; EVQLLEESGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSPGKGLEWLGVIWSGGSTDY ----------------------1------------------------------------- NAAFISRLSISKDNSKSQVFFKMNSLQADDTAIYYCARNRGYSYAMDSWGQGTSVTVSSA -----------------------------------1------------------------ KTTPPSVYPLAPGSASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLS ---------------------2-------------------------------------- SSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC ----------------2-------------------- >THIOL:DISULFIDE INTERCHAN; SWP:P45111; PDB:1T3BA; DAAIKRKLQSFNISNIVIKSSPISGIKTAVTDQGILYVSEDGKYLFEGKLYELTNNGPVD ------------------------------------------------------------ VAGKILVDKLNSYKDEMIVYPAKNEKHVVTVFMDITCHYCHLLHQQLKEYNDLGITVRYL ------------------------------------1--1-------------------- AFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEVKTPNIVKKHYELGIQFGVRG ------------------------------------------------------------ TPSIVTSTGELIGGYLKPADLLRALEETA ----------------------------- >HUZAF ANTIBODY LIGHT CHAI; SWP:Q6GMW1; PDB:1T3FA; DIQMTQSPSTLSASVGDRVTITCKASENVDTYVSWYQQKPGKAPKLLIYGASNRYTGVPS ----------------------1------------------------------------- RFSGSGSGTDFTLTISSLQPDDFATYYCGQSYNYPFTFGQGTKVEVKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC -------------2-------------------- >HUZAF ANTIBODY LIGHT CHAI; SWP:NA; PDB:1T3FB; VQLVQSGAELKKPGSSVKVSCKASGYIFTSSWINWVKQAPGQGLEWIGRIDPSDGEVHYN --------------------1--------------------------------------- QDFKDKATLTVDKSTNTAYMELSSLRSEDTAVYYCARGFLPWFADWGQGTLVTVSSASTK ----------------------------------1------------------------- GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS ----------------------2------------------------------------- LSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC ------------------2-------------------- >ATTRACTIN; SWP:O96910; PDB:1T50A; DQNCDIGNITSQCQMQHKNCEDANGCDTIIEECKTSMVERCQNQEFESAAGSTTLGPQ ---1--------2------3-----3------2-------1----------------- >TYPE IV COLLAGEN; SWP:Q7SIB2; PDB:1T61A; GFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLF ---------------1--------------------------------2----------- CNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGENIRPFISRCAVCEAPAMVMAVHSQT 3-----3------------------------------------2--1------------- IQIPQCPTGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNY -----4---------------------------------5-----------6-----6-- YANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMR -------------------------------------5--4-- >TYPE IV COLLAGEN; SWP:NA; PDB:1T61C; YLLVKHSQTDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYC --------------1--------------------------------2-----------3 NPGDVCYYASRNDKSYWLSTTAPLPMMPVAEEDIRPYISRCSVCEAPAVAIAVHSQDVSI -----3----------------------------------2--1---------------- PHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYYA --4---------------------------------5-----------6------6---- NKYSFWLTTIPEQSFQGTPSADTLKAGLIRTHISRCQVCMKN -----------------------------------5--4--- >IMMUNOGLOBULIN LIGHT CHAI; SWP:NA; PDB:1T66H; EVKLDETGGGLVQPGRPMKLSCVASGFTFSDYWMNWVRQSPEKGLEWVAQIRNKPYNYET ---------------------1-------------------------------------- YYSDSVKGRFTISRDDSKSSVYLQMNNLRAEDMGIYYCTSYGYHGAYWGQGTLVTVSAAK -------------------------------------1---------------------- TTAPSVYPLAPGTAALKSSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSALY ------------------------2----------------------------------- TLTSSVTVPSSSWPSQTVTCNVAHPASSTKVDKKIVPRNC -------------------2-------------------- >Xylanase inhibitor [Precu; SWP:Q8H0K8; PDB:1T6EX; LPVLAPVTKDPATSLYTIPFHDGASLVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANA --------------------------------------1----------2----3----- YPAPGCPAPSCKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAP -----4----2--3-----------4-------------------------------1-- SKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWP ----------------------------------------5------------------- QFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPD ------------------------------------------------------------ VYRPLMDAFTKALAAQARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMT ----------------------------6------------------------------- GKNSMVDVKQGTACVAFVEMKGVAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPHFTGCG -------------6--------------------------------------------5- GL -- >Endo-1,4-beta-xylanase I ; SWP:P55329; PDB:1T6GC; AGINYVQNYNGNLGDFTYDESAGTFSMYWEDGVSSDFVVGLGWTTGSSNAITYSAEYSAS ------------------------------------------------------------ GSSSYLAVYGWVNYPQAEYYIVEDYGDYNPCSSATSLGTVYSDGSTYQVCTDTRTNEPSI ------------------------------1------------------1---------- TGTSTFTQYFSVRESTRTSGTVTVANHFNFWAQHGFGNSDFNYQVMAVEAWSGAGSASVT ------------------------------------------------------------ IS -- >5-methyltetrahydropteroyl; SWP:Q9X112; PDB:1T7LA; FTKAYAFGFPKIGEKREFKKALEDFWKGKITEEQFEEEMNKLRMYMVENYRKNVDVIPSN ------------------------------------------------------------ ELSYYDFVLDTAVMVGAVPERFGEYRGLSTYFDMARGGKALEMTKFFNTNYHYLVPEIET ------------------------------------------------------------ EEFYLLENKPLEDYLFFKSKGIETAPWVIGPFTFLYLSKRNGEWIRRPNQMEKLLESLVS ------------------------------------------------------------ VYKEVFEKLVENGCKEILVNEPAFVCDLEKAHWDLILNVYRELSEFPLTVFTYYDSVSDY ------------------------------------------------------------ EACVSLPVKRLHFDFVSNEENLKNLEKHGFPEDKKLVAGVINGRQPWKVDLRKVASLVEK ------------------------------------------------------------ LGASAISNSCPLFHLPVTLELENNLPGGLKEKLAFAKEKLEELKMLKDFLEGKTFDLPNV ------------------------------------------------------------ SFEDFAVDLQAVERVRNLPEDSFRREKEYTERDRIQRERLNLPLFPTTTIGSFPQTPEVR ------------------------------------------------------------ KMRSKYRKGEISKEEYEAFIKEQIKKAIELQEEIGLDVLVHGEFERTDMVEFFAEKLNGI ------------------------------------------------------------ ATTQNGWVLSYGSRCYRPPIIYGTVTRPEPMTLKEITYAQSLTEKPVKGMLTGPVTIMSW ------------------------------------------------------------ SYYREDIPEREIAYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPIKKSKWPEYFEWA ------------------------------------------------------------ INAFNLAANARPETQIHAHMCYSDFNEIIEYIHQLEFDVISIEASRSKGEIISAFENFKG --------------------1--------------------------------------- WIKQIGVGVWDIHSPAVPSINEMREIVERVLRVLPKELIWINPDCGLKTRNWDEVIPSLR --------------------------------------------1--------------- NMVALAKEMREKFE -------------- >ZINC-ALPHA-2-GLYCOPROTEIN; SWP:P25311; PDB:1T7VA; DGRYSLTYIYTGLSKHVEDVPAFQALGSLNDLQFFRYNSKDRKSQPMGLWRQVEGMEDWK ------------------------------------------------------------ QDSQLQKAREDIFMETLKDIVEYYKDSTGSHVLQGRFGCEIENNRSSGAFWKYYYDGKDY ------------------------------------------------------------ IEFNKEIPAWVPFDPAAQITKQKWEAEPVYVQRAKAYLEEECPATLRKYLKYSKNILDRQ ------------------------------------------------------------ DPPSVVVTSHQAPGEKKKLKCLAYDFYPGKIDVHWTRAGEVQEPELRGDVLHNGNGTYQS --------------------1--------------------------------------- WVVVAVPPQDTAPYSCHVQHSSLAQPLVVPWEA ---------------1----------------- >heparan sulfate D-glucosa; SWP:Q9Y663; PDB:1T8TA; PNSGTLALLLDEGSKQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDRSYDKG ------------------------------------------------------------ LAWYRDLMPRTLDGQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQ ------------------------------------------------------------ TLSKRPDIPTFESLTFKNGLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISD ------------------------------------------------------------ PAGELGRVQDFLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDRE --------------------------------1-----------1--------------- VVRRLREFYRPFNLKFYQMTGHDFGWDG ---------------------------- >PROTEIN 1D10; SWP:O61793; PDB:1T9FA; SDEDFVTCYSVLKFINANDGSRLHSHDVKYGSGSGQQSVTAVKNSDDINSHWQIFPALNA -------1---------------------------------------------------- KCNRGDAIKCGDKIRLKHLTTGTFLHSHHFTAPLSKQHQEVSAFGSEAESDTGDDWTVIC -1-------2-------------------------------------------------2 NGDEWLESEQFKLRHAVTGSYLSLSGQQFGRPIHGQREVVGTDSITGGSAWKVAEGI --------------------------------------------------------- >Endo-1,4-beta-xylanase C ; SWP:Q00177; PDB:1TA3B; ASLNDLFVAAGKSYFGTCSDQALLQNSQNEAIVASQFGVITPENSMKWDALEPSQGNFGW ------------------------------------------------------------ SGADYLVDYATQHNKKVRGHTLVWHSQLPSWVSSIGDANTLRSVMTNHINEVVGRYKGKI ------------------------------------------------------------ MHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFETARAADPDAKLYINDYNLDSASYAK ------------------------------------------------------------ TQAMASYVKKWLAEGVPIDGIGSQAHYSSSHWSSTEAAGALSSLANTGVSEVAITELDIA ------------------------------------------------------------ GAASSDYLNLLNACLNEQKCVGITVWGVSDKDSWRASDSPLLFDGNYQPKDAYNAIVNAL -------------1-----1---------------------------------------- S - >Thrombin inhibitor rhodni; SWP:Q06684; PDB:1TBRR; EGGEPCACPHALHRVCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEPDEDEDVCQEC -----1-2-------3----------2---1----------------3--------4--5 DGDEYKPVCGSDDITYDNNCRLECASISSSPGVELKHEGPCRT --------6----------5---4----------------6-- >PHOSPHOLIPASE A2 ISOFORM ; SWP:Q6SLM2; PDB:1TC8A; NLYQLMNMIQCANTRTWPSYTNYGCYCGKGGSGTPVDDLDRCCYTHDHCYNDAKNIDGCN ----------1-------------2-3--------------43-----5---------6- PVTKTYSYTCTEPTITCNDSKDKCARFVCDCDRTAAICFAKAPYNTSNVMIRSTNSCQ ---------1------7------6----7-5------4------------------2- >LIPASE; SWP:P41365; PDB:1TCA; LPSGSDPAFSQPKSVLDAGLTCQGASPSSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLG ---------------------1-------------------------------------- YTPCWISPPPFMLNDTQVNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPS ---1-------------------------------------------------------- IRSKVDRLMAFAPDYKGTVLAGPLDALAVSAPSVWQQTTGSALTTALRNAGGLTQIVPTT ------------------------------------------------------------ NLYSATDEIVQPQVSNSPLDSSYLFNGKNVQAQAVCGPLFVIDHAGSLTSQFSYVVGRSA -----------------------------------2------------------------ LRSTTGQARSADYGITDCNPLPANDLTPEQKVAAAALLAPAAAAIVAGPKQNCEPDLMPY -----------------2----------------------------------3------- ARPFAVGKRTCSGIVTP ----------3------ >Aggrecan core protein [Pr; SWP:P07897; PDB:1TDQB; EQCEEGWTKFQGHCYRHFPDRETWVDAERRCREQQSHLSSIVTPEEQEFVNKNAQDYQWI ------------------------------1----------------------------- GLNDRTIEGDFRWSDGHSLQFEKWRPNQPDNFFATGEDCVVMIWHERGEWNDVPCNYQLP --------------------------------------2---------------2----- FTCKKG --1--- >DISINTEGRIN CHAIN A; SWP:P83658; PDB:1TEJA; SVNPCCDPVICKPRDGEHCISGPCCNNCKFLNSGTICQRARGDGNHDYCTGITTDCPRNR ----1-------------2----32--1--------4-----------3------4---- YN -- >DISINTEGRIN CHAIN A; SWP:NA; PDB:1TEJB; NSVNPCCDPQTCKPIEGKHCISGPCCENCYFLRSGTICQRARGDGNNDYCTGITPDCPRN -----1-------------2----32--1--------4-----------3------4--- RYN --- >T. FUSCA ENDO/EXO-CELLULA; SWP:P26221; PDB:1TF4A; EPAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHV ------------------------------------------------------------ KFGFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGD ------------------------------------------------------------ GDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQ --------------------------1--------------------------------- HAKQLYTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEY ------------------1----------------------------------------- DFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKETGKQKYIDDANRWLDYWTVGVNGQRV ------------------------------------------------------------ PYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDPVRKQRYHDFAVRQINYALGDNPRN ------------------------------------------------------------ SSYVVGFGNNPPRNPHHRTAHGSWTDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDY ------------------------------------------------------------ VANEVATDYNAGFSSALAMLVEEYGGTPLADFPPTEEPDGPEIFVEAQINTPGTTFTEIK ------------------------------------------------------------ AMIRNQSGWPARMLDKGTFRYWFTLDEGVDPADITVSSAYNQCATPEDVHHVSGDLYYVE ------------------------------------------2----------------- IDCTGEKIFPGGQSEHRREVQFRIAGGPGWDPSNDWSFQGIGNELAPAPYIVLYDDGVPV --2--------------------------------------------------------- WGTAP ----- >TRANSFERRIN; SWP:P19134; PDB:1TFD; VRWCAVNDHEASKCANFRDSMKKVLPEDGPRIICVKKASYLDCIKAIAAHEADAVTLDAG ---1---------2-------------------2--------1----------------- LVHEAGLTPNNLKPVVAEFYGSKENPKTFYYAVALVKKGSNFQLNELQGKKSCHTGLGRS ----------------------------------------------------3------- AGWNIPIGLLYCDLPEPRKPLEKAVASFFSGSCVPCADQLCQLCPGCGCSSSQPYFGYSG --------------------------------4--5----6--4--6-5----------- AFKCLKDGLGDVAFVKQETIFENLPSKDERDQYELLCLDNTRKPVDEYEQCHLARVPSHA ---3--------------------------------7-------------7--------- VVARSVDGKEDLIWELLNQAQEHFGKDKSGDFQLFSSPHGKNLLFKDSAYGFFK ------------------------------------------------------ >ELONGATION FACTOR TS; SWP:P43895; PDB:1TFE; AREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIP ------------------------------------------------------------ AEELEKERQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKVKELIQ ------------------------------------------------------------ QAIAKIGENIVVRRFCRFELGA ---------------1------ >TOXIN FS2; SWP:P01414; PDB:1TFS; RICYSHKASLPRATKTCVENTCYKMFIRTHREYISERGCGCPTAMWPYQTECCKGDRCNK --1-------------2----1----------------2-3----------34----4-- >Tissue factor pathway inh; SWP:P10646; PDB:1TFXC; KPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDG ----1--------2---------------3-------2------------3---1--- >4-HYDROXYPHENYLPYRUVATE D; SWP:P93836; PDB:1TFZA; NPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDL ------------------------------------------------------------ RFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSI ------------------------------------------------------------ SVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKEFLPGFERVEDASSFPLDYGIR ------------------------------------------------------------ RLDHAVGNVPELGPALTYVAGFTGFHQFASGLNSAVLASNDEMVLLPINEPVHGKSQIQT ------------------------------------------------------------ YLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSD ------------------------------------------------------------ DQIKECEELGILVDRDDQGTLLQIFTKPLGDRPTIFIEIIQRVGCMQSGGCGGFGKGNFS --------------------------------------------1-----1--------- ELFK ---- >BETA-GALACTOSIDASE; SWP:Q700S9; PDB:1TG7A; LLQKYVTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDWA ------------------------------------------------------------ LLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDGILR ------------------------------------------------------------ TSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYI --------------------------------------------11-------------- EDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLPT ----------------------------------------------2------------- YFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFL -----------------------------------2------------------------ NLYMIFGGTNWGNLGHPGGYTSYDYGSAISESRNITREKYSELKLLGNFAKVSPGYLVAN ------------------------------------------------------------ PGDLSTSTYTNTADLTVTPLLGSNSSASSFFVIRHSDYSSQASVEYKLTVPTSAGNLTIP ------------------------------------------------------------ QLGGSLTLSGRDSKIHVTDYDVAGTNILYSTAEVFTWKKFNNEKVLVLYGGPGEHHEFAV ------------------------------------------------------------ SGASSSSVVEGSSSGISSKKVGKALVVAWDVSTARRIVQVGSLKVFLLDRNSAYNYWVPQ ------------------------------------------------------------ VPTKGTAPGYSNQETTASSIIVKAGYLVRSAYLDGNDLHIQADFNATTPIEVVGAPSGAK ------------------------------------------------------------ NLVINGKKTQTKVDKNGIWSASVAYTAPKVQLPSLKSLKWKSVDTLPEAKNTYDDSAWTS ------------------------------------------------------------ ADHAYTNNSAHSLQTPTSLFASDYGYHTGALLFRGHFTANGKEKTFFVQTKGGTAYGHSI ------------------------------------------------------------ WINETYVGSWAGTSINDNNNATYTLPTLQSGKNYVITVVIDNMGLDEDWTIGSEDMKNPR ------------------------------------------------------------ GIIQYSLSGQEASAISWKLTGNLGGENYRDTVRGPLNEGGLYAERQGFHQPQPPTQKWDS ------------------------------------------------------------ SSPFTGLTKPGIRFYSTSFDLDLPSGYDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGKYV ------------------------------------------------------------ NNIGPQTSFPVPEGILNYHGTNWLALSLWAQEDNGAKLDSFELINTTPVLTSLGEVKSVN ------------------------------------------------------------ QPKYQARKGAY ----------- >TRANSFORMING GROWTH FACTO; SWP:P17125; PDB:1TGJ; ALDTNYCFRNLEENCCVRPLYIDFRQDLGWKWVHEPKGYYANFCSGPCPYLRSADTTHST ------1-------21---------------------------3---4------------ VLGLYNTLNPEASASPCCVPQDLEPLTILYYVGRTPKVEQLSNMVVKSCKCS -----------------2------------------------------3-4- >THERMOSTABLE B DNA POLYME; SWP:P56689; PDB:1TGOA; MILDTDYITEDGKPVIRIFKKENGEFKIDYDRNFEPYIYALLKDDSAIEDVKKITAERHG ------------------------------------------------------------ TTVRVVRAEKVKKKFLGRPIEVWKLYFTHPQDVPAIRDKIKEHPAVVDIYEYDIPFAKRY ------------------------------------------------------------ LIDKGLIPMEGDEELKMLAFDIETLYHEGEEFAEGPILMISYADEEGARVITWKNIDLPY ------------------------------------------------------------ VDVVSTEKEMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKRSEKLGVKFILGREGSEPK ------------------------------------------------------------ IQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAIFGQPKEKVYAEEIAQAWE ------------------------------------------------------------ TGEGLERVARYSMEDAKVTYELGKEFFPMEAQLSRLVGQSLWDVSRSSTGNLVEWFLLRK ------------------------------------------------------------ AYERNELAPNKPDERELARRRESYAGGYVKEPERGLWENIVYLDFRSLYPSIIITHNVSP ------------------------------------------------------------ DTLNREGCEEYDVAPQVGHKFCKDFPGFIPSLLGDLLEERQKVKKKMKATIDPIEKKLLD -------1-------------1-------------------------------------- YRQRAIKILANSFYGYYGYAKARWYCKECAESVTAWGRQYIETTIREIEEKFGFKVLYAD ------------------------------------------------------------ TDGFFATIPGADAETVKKKAKEFLDYINAKLPGLLELEYEGFYKRGFFVTKKKYAVIDEE ------------------------------------------------------------ DKITTRGLEIVRRDWSEIAKETQARVLEAILKHGDVEEAVRIVKEVTEKLSKYEVPPEKL ------------------------------------------------------------ VIYEQITRDLKDYKATGPHVAVAKRLAARGIKIRPGTVISYIVLKGSGRIGDRAIPFDEF ------------------------------------------------------------ DPAKHKYDAEYYIENQVLPAVERILRAFGYRKEDLRYQKTRQVGLGAWLKPKT ----------------------------------------------------- >INSULIN-LIKE GROWTH FACTO; SWP:P01343; PDB:1TGRA; GPETLCGAELVDALQFVCGDRGFYFNKPKAKGIVDECCFRSCDLRRLEMYCA -----1-----------2------------------31---3--------2- >GAMMA-CARDIOTOXIN; SWP:P01468; PDB:1TGXA; LKCNQLIPPFWKTCPKGKNLCYKMTMRAAPMVPVKRGCIDVCPKSSLLIKYMCCNTDKCN --1----------2------1----------------2---3----------34----4- >CATHEPSIN B; SWP:P00787; PDB:1THEA; LPESFDAREQWSNCPTIAQIRDQGSCGSCWAFGAVEAMSDRICIHTNGRVNVEVSAEDLL -------------1-----------2----------------1----------------- TCCGIQCGDGCNGGYPSGAWNFWTRKGLVSGGVYNSHIGCLPYTIPPCEHHVNGARPPCT -34---4---2----------------------------5-------6----------6- GEGDTPKCNKMCEAGYSTSYKEDKHYGYTSYSVSDSEKEIMAEIYKNGPVEGAFTVFSDF -------3---5------------------------------------------------ LTYKSGVYKHEAGDVMGGHAIRILGWGIENGVPYWLVANSWNADWGDNGFFKILRGENHC ------------------------------------------------------------ GIESEIVAGIPRT ------------- >LIPASE; SWP:P22394; PDB:1THG; APTAVLNGNEVISGVLEGKVDTFKGIPFADPPLNDLRFKHPQPFTGSYQGLKANDFSPAC -----------------------------------------------------------1 MQLDPGNSLTLLDKALGLAKVIPEEFRGPLYDMAKGTVSMNEDCLYLNVFRPAGTKPDAK -------------------------------------------1---------------- LPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEG ------------------------------------------------------------ NTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKL ------------------------------------------------------------ FHSAILQSGGPLPYHDSSSVGPDISYNRFAQYAGCDTSASANDTLECLRSKSSSVLHDAQ ----------------------------------2-----------2------------- NSYDLKDLFGLLPQFLGFGPRPDGNIIPDAAYELFRSGRYAKVPYISGNQEDEGTAFAPV ------------------------------------------------------------ ALNATTTPHVKKWLQYIFYDASEASIDRVLSLYPQTLSVGSPFRTGILNALTPQFKRVAA ------------------------------------------------------------ ILSDMLFQSPRRVMLSATKDVNRWTYLSTHLHNLVPFLGTFHGNELIFQFNVNIGPANSY ------------------------------------------------------------ LRYFISFANHHDPNVGTNLLQWDQYTDEGKEMLEIHMTDNVMRTDDYRIEGISNFETDVN ------------------------------------------------------------ LYG --- >THIOREDOXIN; SWP:P20857; PDB:1THX; SKGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEI -------------------------------1--1------------------------- DPNPTTVKKYKVEGVPALRLVKGEQILDSTEGVISKDKLLSFLDTHLN ------------------------------------------------ >PLANT DEFENSIN; SWP:Q6T418; PDB:1TI5A; RTCMIKKEGWGKCLIDTTCAHSCKNRGYIGGNCKGMTRTCYCLVNC --1---------2-----3---4---------2------3-4---1 >HEMAGGLUTININ; SWP:Q6GYW3; PDB:1TI8A; ICLGHHAVSNGTKVNTLTERGVEVVNATETVERTNVPRICSKGKRTVDLGQCGLLGTITG ---------------------------------------------------1-------- PPQCDQFLEFSADLIIERREGSDVCYPGKFVNEEALRQILRESGGIDKETMGFTYSGIRT ---1--------------------2----------------------------------- NGATSACRRSGSSFYAEMKWLLSNTDN ------2-------------------- >Hemagglutinin; SWP:Q4ZJH4; PDB:1TI8B; GLFGAIAGFIENGWEGLIDGWYGFRHQNAQGEGTAADYKSTQSAIDQITGKLNRLIEKTN ------------------------------------------------------------ QQFELIDNEFTEVEKQIGNVINWTRDSMTEVWSYNAELLVAMENQHTIDLTDSEMNKLYE ------------------------------------------------------------ RVKRQLRENAEEDGTGCFEIFHKCDDDCMASIRNNTYDHSRYREEA -----------------------1---1------------------ >LIPASE; SWP:O59952; PDB:1TIB; EVSQDLFNQFNLFAQYSAAAYCGKNNDAPAGTNITCTGNACPEVEKADATFLYSFEDSGV ---------------------1-------------2----2------------------- GDVTGFLALDNTNKLIVLSFRGSRSIENWIGNLNFDLKEINDICSGCRGHDGFTSSWRSV -------------------------------------------3--3------------- ADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRVGNRA ------------------------------------------------------------ FAEFLTVQTGGTLYRITHTNDIVPRLPPREFGYSHSSPEYWIKSGTLVPVTRNDIVKIEG ------------------------------------------------------------ IDATGGNNQPNIPDIPAHLWYFGLIGTCL ---------------------------1- >ERYTHRINA TRYPSIN INHIBIT; SWP:P09943; PDB:1TIE; VLLDGNGEVVQNGGTYYLLPQVWAQGGGVQLAKTGEETCPLTVVQSPNELSDGKPIRIES --------------------------------------1--------------------- RLRSAFIPDDDKVRIGFAYAPKCAPSPWWTVVEGLSVKLSEDESTQFDYPFKFEQVSDQL ----------------------1------------------------------------- HSYKLLYCEGKHEKCASIGINRDQKGYRRLVVTEDYPLTVVLKKDE -------2------2------------------------------- >FAB 2F5 LIGHT CHAIN; SWP:NA; PDB:1TJGL; ALQLTQSPSSLSASVGDRITITCRASQGVTSALAWYRQKPGSPPQLLIYDASSLESGVPS ----------------------1------------------------------------- RFSGSGSGTEFTLTISTLRPEDFATYYCQQLHFYPHTFGGGTRVDVRRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE -------------2------------------- >SUGAR TRANSPORT PROTEIN; SWP:Q8Z2X8; PDB:1TJYA; GSAERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDGPTEPSVSGQVQLVNNFVNQG ------------------------------------------------------------ YDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSDTKPECRSYYINQGTPKQLGSMLVEMA --------------1-----------------------1--------------------- AHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQEHPGWEIVTTQFGYNDATKSLQTA ------------------------------------------------------------ EGIIKAYPDLDAIIAPDANALPAAAQAAENLKRNNLAIVGFSTPNVMRPYVQRGTVKEFG ------------------------------------------------------------ LWDVVQQGKISVYVANALLKNMPMNVGDSLDIPGIGKVTVSPNSEQGYHYEAKGNGIVLL ------------------------------------------------------------ PERVIFNKDNIDKYDF ---------------- >AMINOPEPTIDASE; SWP:P80561; PDB:1TKJA; APDIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSG ------------------------------------------------------------ GATGYNLIANWPGGDPNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPD ------------------------------------------------------------ KHLRFAWWGAEELGLIGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVYDDDPVIEK ------------------------------------------------------------ TFKNYFAGLNVPTEIETEGDGRSDHAPFKNVGVPVGGLFTGAGYTKSAAQAQKWGGTAGQ ------------------------------------------------------------ AFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSS ----1----1--------------------------- >TETRANECTIN; SWP:P05452; PDB:1TN3; ALQTVCLKGTKVHMKCFLAFTQTKTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSV -----1---------1----------------2--------------------------- GNEAEIWLGLNDMAAEGTWVDMTGARIAYKNWETEITAQPDGGKTENCAVLSGAANGKWF -----------------------------------------------3------------ DKRCRDQLPYICQFGIV ---3-------2----- >SUPEROXIDE DISMUTASE; SWP:NA; PDB:1TO4A; MKAVCVMTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAG -------------------------------------------------------1---- AHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRSMVIHE ------------------------------------------------------------ NEDDLGRGGHELSKVTGNAGGRLACGVVGLAAE ------------------------1-------- >NEUROGENIC LOCUS NOTCH HO; SWP:P46531; PDB:1TOZA; QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQ -----1------2-----1--------2-3--------3------4----5-----4--- IGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ -----5-6--------6------7----8-----7--------8-9--------9- >T-PLASMINOGEN ACTIVATOR F; SWP:P00750; PDB:1TPG; SYQVICRDEKTQMIYQQHQSWLRPVLRSNRVEYCWCNSGRAQCHSVPVKSCSEPRCFNGG -----1---------------------------2-1------2-------3----4---- TCQQALYFSDFVCQCPEGFAGKSCEIDTRAT -3----------4-5--------5------- >TS KAPA; SWP:P56219; PDB:1TSK; VVIGQRCYRSPDCYSACKKLVGKATGKCTNGRCDC ------1-----2---3----------1----2-3 >COPPER AMINE OXIDASE, LIV; SWP:Q29437; PDB:1TU5A; QLFADLSREELTTVMSFLTQQLGPDLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGS ------------------------------------------------------------ PPPAREALAIVFFGGQPQPNVTELVVGPLPQPSYMRDVTVERHGGPLPYYRRPVLLREYL ------------------------------------------------------------ DIDQMIFNRELPQAAGVLHHCCSYKQGGQKLLTMNSAPRGVQSGDRSTWFGIYYNITKGG --------------------11-------------------------------------- PYLHPVGLELLVDHKALDPADWTVQKVFFQGRYYENLAQLEEQFEAGQVNVVVIPDRFSV ------------------------------------------------------------ QGNRVASSLWTFSFGLGAFSGPRVFDVRFQGERLAYEISLQEAGAVYGGNTPAAMLTRYM ------------------------------------------------------------ DSGFGMGYFATPLIRGVDCPYLATYMDWHFVVESQTPKTLHDAFCVFEQNKGLPLRRHHS ------------------2-------------------------2--------------- DFLSHYFGGVAQTVLVFRSVSTMLNDYVWDMVFYPNGAIEVKLHATGYISSAFLFGAARR ------------------------------------------------------------ YGNQVGEHTLGPVHTHSAHYKVDLDVGGLENWVWAEDMAFVPTAIPWSPEHQIQRLQVTR ------------------------------------------------------------ KQLETEEQAAFPLGGASPRYLYLASKQSNKWGHPRGYRIQTVSFAGGPMPQNSPMERAFS ------------------------------------------------------------ WGRYQLAITQRKETEPSSSSVFNQNDPWTPTVDFSDFINNETIAGKDLVAWVTAGFLHIP ------------------------------------------------------------ HAEDIPNTVTVGNGVGFFLRPYNFFDQEPSMD -------------------------------- >CATHEPSIN K; SWP:P43235; PDB:1TU6A; APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN ---------------------1---------------------------------2---- DGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKA --1--------------------------------2------------------------ LKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWII ----------------------------------3------------------------- KNSWGENWGNKGYILMARNKNNACGIANLASFPKM -----------------------3----------- >ODORANT BINDING PROTEIN A; SWP:Q9U9J5; PDB:1TUJA; IDQDTVVAKYMEYLMPDIMPCADELHISEDIATNIQAAKNGADMSQLGCLKACVMKRIEM --------------------1---------------------------2---1------- LKGTELYVEPVYKMIEVVHAGNADDIQLVKGIANECIENAKGETDECNIGNKYTDCYIEK -----------------------------------3----------2--------3---- LFS --- >NONSPECIFIC LIPID-TRANSFE; SWP:P82900; PDB:1TUKA; ACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSC -1-------2-------------23--------1-4-----------------------3 GLAVPHC ------4 >XYLANASE; SWP:P23360; PDB:1TUX; AAAQSVDQLIDARGKVYFGVATDQNRLTTGKNAAIIQADFGQVTPENSMKWDATEPSQGN ------------------------------------------------------------ FNFAGADYLVNWAQQNGKLIRGHTLVWHSQLPSWVVSITDKNTLTNVMKNHITTIMTRYI ------------------------------------------------------------ GKIRAWDVVNEAFNEDGSLRQTVFNNVIGEDYIPIAFRTARAADPNAKLYINDYNLDSAS ------------------------------------------------------------ KPKTSAIVKRVKKWRAAGVPIDGIGSQTHLSAGQGASIDAALPNLASAGTPEVAITELDI ------------------------------------------------------------ AGATSTDYVDVVNACLDVDSCIGITVWGVADPDSWRASTTPLLFDGNFNPKPAYNAIVQL --------------1-----1--------------------------------------- L - >CRYPTDIN-4; SWP:P28311; PDB:1TV0A; GLLCYCRKGHCKRGERVRGTCGIRFLYCCPRR ---1-2----3---------2------31--- >Dihydroorotate dehydrogen; SWP:Q08210; PDB:1TV5A; FESYNPEFFLYDIFLKFCLKYIDGEICHDLFLLLGKYNILPYDTSNDSIYACTNIKHLDF -----------------1--------1--------------------------------- INPFGVAAGFDKNGVCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCG ------------------------------------------------------------ FNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYAD ------------------------------------------------------------ YIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEFLWFNTTKKKPLVFVKLAPDLN ------------------------------------------------------------ QEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNY ------------------------------------------------------------ TNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGY ------------------------------------------------------------ YNLKEAIGRKH ----------- >TRANSACTIVATOR PROTEIN; SWP:NA; PDB:1TVS; LEDRRIPGTAEENLQKSSGGVPGQNTGGQEARPNYHCQLCFLRSLGIDYLDASLRKKNKQ ------------------------------------1--1-------------------- RLKAIQQGRQPQYLL --------------- >NEUTROPHIL ACTIVATING PEP; SWP:P02775; PDB:1TVXA; LRCLCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKK --1-2-----------------------1---------------2--------------- LAGD ---- >TOXIN B; SWP:P01386; PDB:1TXA; TKCYVTPDATSQTCPDGQDICYTKTWCDGFCSSRGKRIDLGCAATCPKVKPGVDIKCCST --1----------2------1-----3---3----------2---4----------45-- DNCNPFPTWKRKH --5---------- >METAL-BINDING PROTEIN YOD; SWP:P76344; PDB:1TXLA; HGKPLTEVEQKAANGVFDDANVQNRTLSDWDGVWQSVYPLLQSGKLDPVFQKKADADKTK ------------------------------------------------------------ TFAEIKDYYHKGYATDIEMIGIEDGIVEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYL -------------------------------------1---------------------- FECKDPESKAPKYIQFSDHIIAPRKSSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEE --1--------------------------------------------------------- VVEEMMSH -------- >MAUROTOXIN; SWP:P80719; PDB:1TXM; VSCTGSKDCYAPCRKQTGCPNAKCINKSCKCYGC --1-----2---3-----3----1----2-4--4 >INTEGRIN ALPHA-IIB; SWP:P08514; PDB:1TXVA; LNLDPVQLTFYAGPNGSQFGFSLDFHKDSHGRVAIVVGAPRTLGPSQEETGGVFLCPWRA -------------------------------------------------------1---- EGGQCPSLLFDLRDETRNVGSQTLQTFKARQGLGASVVSWSDVIVACAPWQHWNVLEKTE ----1-----------------------------------------2------------- EAEKTPVGSCFLAQPESGRRAEYSPCRGNTLSRIYVENDFSWDKRYCEAGFSSVVTQAGE ---------2---------------3--------------------3------------- LVLGAPGGYYFLGLLAQAPVADIFSSYRPGILLWHVSSQSLSFDSSNPEYFDGYWGYSVA ------------------------------------------------------------ VGEFDGDLNTTEYVVGAPTWSWTLGAVEILDSYYQRLHRLRAEQMASYFGHSVAVTDVNG ------------------------------------------------------------ DGRHDLLVGAPLYMESRADRKLAEVGRVYLFLQPRGPHALGAPSLLLTGTQLYGRFGSAI ------------------------------------------------------------ APLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLDSPFPTGSAFGFS ------------------------------------------------------------ LRGAVDIDDNGYPDLIVGAYGANQVAVYRAQP -------------------------------- >ISOCITRATE DEHYDROGENASE; SWP:Q9YE81; PDB:1TYOA; SPPCTTEELSPPPGGSLVEYSGGSLRVPDNPVVAFIRGDGVGPEVVESALKVVDAAVKKV ---1-------------------------------------------------------- YGGSRRIVWWELLAGHLAREKCGELLPKATLEGIRLARVALKGPLETPVGTGYRSLNVAI ---------------------1-------------------------------------- RQALDLYANIRPVRYYGQPAPHKYADRVDMVIFRENTEDVYAGIEWPHDSPEAARIRRFL ------------------------------------------------------------ AEEFGISIREDAGIGVKPISRFATRRLMERALEWALRNGNTVVTIMHKGNIMKYTEGAFM ------------------------------------------------------------ RWAYEVALEKFREHVVTEQEVQEKYGGVRPEGKILVNDRIADNMLQQIITRPWDYQVIVA ------------------------------------------------------------ PNLNGDYISDAASALVGGIGMAAGMNMGDGIAVAEPVHGTAPKYAGKDLINPSAEILSAS ------------------------------------------------------------ LLIGEFMGWREVKSIVEYAIRKAVQSKKVTQDLARHMPGVQPLRTSEYTETLIAYIDEAD ------------------------------------------------------------ LNEVLAG ------- >FAB YADS1 LIGHT CHAIN; SWP:Q6GMX8; PDB:1TZHA; DIQMTQSPSSLSASVGDRVTITCRASQASYSSVAWYQQKPGKAPKLLIYAASYLYSGVPS ----------------------1------------------------------------- RFSGSGSGTDFTLTISSLQPEDFATYYCQSSASPATFGQGTKVEIKRTVAAPSVFIFPPS ---------------------------1-------------------------------- DEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTL ------------2----------------------------------------------- SKADYEKHKVYACEVTHQGLSSPVTKSFNR ------------2----------------- >FAB YADS2 LIGHT CHAIN; SWP:Q6GMX8; PDB:1TZIA; DIQMTQSPSSLSASVGDRVTITCRASQSYAYAVAWYQQKPGKAPKLLIYDASYLYSGVPS ----------------------1------------------------------------- RFSGSGSGTDFTLTISSLQPEDFATYYCQQAYSSPDTFGQGTKVEIKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC -------------2-------------------- >PENICILLIN-INSENSITIVE MU; SWP:P14007; PDB:1TZPA; ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQ ------------------------1----------------------------------- RLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQ ------------------------------------------------------------ ALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRK -----------------------------------------------2------------ VRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPLPPSCQALLDEHVI ----------------3------3-----------2--------------1--------- >CATHEPSIN E; SWP:P14091; PDB:1TZSA; KEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSS ------------------------------------------1----1------------ TYSQPGQSFSIQYGTGSLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILG ------------------------------------------------------------ LGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPGAGSELIFGGYDHSHFSGSLNWV ------------------------------------------------------------ PVTKQAYWQIALDNIQVGGTVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPVDG -----------------------2---2-------------------------------- EYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDQFCSSGFQGLDIHPPAGPLWILGDV -----3-------------------------------3---------------------- FIRQFYSVFDRGNNRVGLAPAV ---------------------- >von Willebrand factor [Pr; SWP:Q8CIZ8; PDB:1U0OC; FYCSKLLDLVFLLDGSSMLSEAEFEVLKAFVVGMMERLHISQKRIRVAVVEYHDGSRAYL --1--------------------------------------------------------- ELKARKRPSELRRITSQIKYTGSQVASTSEVLKYTLFQIFGKIDRPEASHITLLLTASQE ------------------------------------------------------------ PPRMARNLVRYVQGLKKKKVIVIPVGIGPHASLKQIRLIEKQAPENKAFLLSGVDELEQR ------------------------------------------------------------ RDEIVSYLCDLAPEAP --------1------- >NITROPHORIN 1; SWP:Q26239; PDB:1U17A; MKCTKNALAQTGFNKDKYFNGDVWYVTDYLDLEPDDVPKRYCAALAAGTASGKLKEALYC --1--------------------------------------2------------------ YDPKTQDTFYDVSELQEESPGKYTANFKKVEKNGNVKVDVTSGNYYTFTVMYADDSSALI ------------------------------------------------------------ HTCLHKGNKDLGDLYAVLNRNKDTNAGDKVKGAVTAASLKFSDFISTKDNKCEYDNVSLK --1------------------------------------------------2-------- SLLTK ----- >RHODOPSIN; SWP:P02699; PDB:1U19A; MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLY ------------------------------------------------------------ VTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLG -------------------------------------------------1---------- GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIP ------------------------------------------------------------ EGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES ------1----------------------------------------------------- ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAV ------------------------------------------------------------ YNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA ------------------------------------------------ >DYSTROGLYCAN; SWP:Q62165; PDB:1U2CA; AVPTVVGIPDGTAVVGRSFRVSIPTDLIASSGEIIKVSAAGKEALPSWLHWDPHSHILEG ------------------------------------------------------------ LPLDTDKGVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHNACAADEPVTVLTVILDA --------------------------------------------1--------------- DLTKMTPKQRIDLLNRMQSFSEVELHNMKLVPVVNNRLFDMSAFMAGPGNAKKVVENGAL ------------------------------------------------------------ LSWKLGCSLNQNSVPDIRGVETPAREGAMSAQLGYPVVGWHIANKKPT ------1----------------------------------------- >CRYPTOCHROME 1 APOPROTEIN; SWP:Q43125; PDB:1U3DA; CSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQLDS ------------------------------------------------------------ SLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQGIA -------1---------------------------------------------------- VRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKIISGDVSKCVA ---------------------------------------------------------1-- DPLVFEDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTSFLSP ------------------------------------------------------------ HLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHPYSHE ------------------------------------------------------------ RPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV ------------------------------------------------------------ LQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNGEY ------------------------------------------------------------ VRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEALSQMW ------------------------------------------------------------ QLEAA ----- >T-CELL RECEPTOR ALPHA-CHA; SWP:Q5R1B3; PDB:1U3HA; QVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRF --------------------1--------------------------------------- TIFFNKREKKLSLHIADSQPGDSATYFCAASANSGTYQRFGTGTKLQVVP ---------------------------1---------------------- >PRION-LIKE PROTEIN; SWP:P27177; PDB:1U3MA; GSVVGGLGGYAMGRVMSGMNYHFDRPDEYRWWSENSARYPNRVYYRDYSSPVPQDVFVAD ------------------------------------------------------------ CFNITVTEYSIGPAAKKNTSEAVAAANQTEVEMENKVVTKVIREMCVQQYREYRLAS 1--------------------------------------------1----------- >ELASTASE; SWP:P14756; PDB:1U4GA; AEAGGPGGNQKIGKYTYGSDYGPLIVNDRCEMDDGNVITVDMNSSTDDSKTTPFRFACPT -----------------------------1---------------------------1-- NTYKQVNGAYSPLNDAHFFGGVVFKLYRDWFGTSPLTHKLYMKVHYGRSVENAYWDGTAM ------------------------------------------------------------ LFGDGATMFYPLVSLDVAAHEVSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAEFYMRG ------------------------------------------------------------ KNDFLIGYDIKKGSGALRYMDQPSRDGRSIDNASQYYNGIDVHHSSGVYNRAFYLLANSP ------------------------------------------------------------ GWDTRKAFEVFVDANRYYWTATSNYNSGACGVIRSAQNRNYSAADVTRAFSTVGVTCP ---------------------------------------------------------- >PHOSPHOLIPASE A2 ISOFORM ; SWP:Q6SLM1; PDB:1U4JA; NLKQFKNMIQCAGTRTWTSYIGYGCYCGYGGSGTPVDELDRCCYTHDHCYNKAANIPGCN ----------1-------------2-3--------------43-----5---------6- PLIKTYSYTCTKPNITCNDTSDSCARFICDCDRTAAICFASAPYNINNIMISASTSCQ ---------1------7------6----7-5------4------------------2- >SECRETED PROTEIN ASP-2; SWP:Q7Z1H1; PDB:1U53A; FGCPDNGMSEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAM --1-------------------------------------------------1------- NNAKQCVFKHSQPNQRKGLGENIFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLT -----2------------------------------------------------------ GGLFSRGVGHYTQMVWQETVKLGCYVEACSNMCYVVCQYGPAGNMMGKDIYEKGEPCSKC -----------------------3----2-------3-------------------4--5 ENCDKEKGLCSA --4------5-- >MHC-I HOMOLOG M144; SWP:Q1XE09; PDB:1U58A; ESGLRYAYTLVVDGTANTRRCFGTGHVDGEAFVGYSNNKTHGIGRWVNASHVEEENKEFV --------------------1--------------------------------------- RQCKELQAELDKMQNNSKVIGVKTVQLDVGCTSKIEKHYAYDGNETECQKKLTEYRKLVL --1---------------------------2----------------2------------ ASAVSPQLEVERRSSGREGGMRLRCFARDYYPADLEIRWWKDDGGGGALPQTSKQHHDPL ------------------------3----------------------------------- PSGNGLYQKHIDVYVDGGLEHVYSCRVKGIATGLELQIVRWK ------------------------3----------------- >ALPHA 1 TYPE II COLLAGEN ; SWP:P02458; PDB:1U5MA; YVEFQEAGSCVQDGQRYNDKDVWKPEPCRICVCDTGTVLCDDIICEDVKDCLSPEIPFGE ---------1-----------------2--3-1------3----4-----5--------- CCPICPADLAAAA 24--5-------- >Tumor necrosis factor lig; SWP:Q9D777; PDB:1U5XA; KHSVLHLVPVNITSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFHDVTFT ------------------------------------------------------------ MGQVVSREGQGRRETLFRCIRSMPSDAYNSCYSAGVFHLHQGDIITVKIPRANAKLSLSP ------------------1-----------1----------------------------- HGTFLGFVKL ---------- >FKBP-TYPE PEPTIDYL-PROLYL; SWP:Q9SCY2; PDB:1U79A; CEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVG 1-----------1----------------------------------------------- EVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIE -----------------------------------------2----2------------- YIGKA ----- >TRIGGERING RECEPTOR EXPRE; SWP:Q9JKE2; PDB:1U9KA; EEERYDLVEGQTLTVKCPFNIMKYANSQKAWQRLPDGKEPLTLVVTQRPFTRPSEVHMGK ----------------1------------------------------------------- FTLKHDPSEAMLQVQMTDLQVTDSGLYRCVIYHPPNDPVVLFHPVRLVVT ----------------------------1--------------------- >Lysozyme C [Precursor]; SWP:P00703; PDB:1UACH; DVQLQESGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSSFGSTFYN ---------------------1-------------------------------------- PSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANWDGDYWGQGTLVTVSAA ----------------------------------1------------------- >Lysozyme C [Precursor]; SWP:P00703; PDB:1UACL; DIVLTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPS ----------------------1------------------------------------- RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIK ---------------------------1------------------- >POLYGULURONATE LYASE; SWP:Q9RB42; PDB:1UAIA; EPCDYPAQQLDLTDWKVTLPIGSSGKPSEIEQPALDTFATAPWFQVNAKCTGVQFRAAVN --1----------------------------------------------1---------- GVTTSGSGYPRSELREMTDGGEEKASWSATSGTHTMVFREAFNHLPEVKPHLVGAQIHDG ------------------------------------------------------------ DDDVTVFRLEGTSLYITKGDDTHHKLVTSDYKLNTVFEGKFVVSGGKIKVYYNGVLQTTI ------------------------------------------------------------ SHTSSGNYFKAGAYTQANCSNSSPCSSSNYGQVSLYKLQVTHS ------------------2-----2------------------ >PROCOLLAGEN C-PROTEINASE ; SWP:Q15113; PDB:1UAPA; SPDAPTCPKQCRRTGTLQSNFCASSLVVTATVKSMVREPGEGLAVTVSLIGAYKTGGLDL ------1---2----------3-------------------------------------- PSPPTGASLKFYVPCKQCPPMKKGVSYLLMGQVEENRGPVLPPESFVVLHRPNQDQILTN --------------1--2------------------------------------------ LSKRKCPSQPV -----3----- >ALPHA-GALACTOSIDASE; SWP:Q9FXT4; PDB:1UASA; FENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRD --------------------1-------------------------------1------- SQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFA ----------------------------------------2------------------- SWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKENPATWAGRMGNSW -----------2------------------------------------------------ RTTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALA ------------------------------------------------------------ KAPLLIGCDVRSMSQQTKNILSNSEVIAVNQDSLGVQGKKVQSDNGLEVWAGPLSNNRKA ------------------------------------------------------------ VVLWNRQSYQATITAHWSNIGLAGSVAVTARDLWAHSSFAAQGQISASVAPHDCKMYVLT ------------------------------------------------------------ PN -- >ANTIBODY 19G2, ALPHA CHAI; SWP:NA; PDB:1UB5A; EVKLLESGGGLVKPGGSLKLSCTASGITFSRYIMSWVRQIPEKRLEWVASISSGGITYYP ---------------------1-------------------------------------- DSVAGRFTISRDNVRNILYLQMSSLRSEDTALYYCARGQGRPYWGQGTLVTVSSAKTTPP ----------------------------------1------------------------- SVYPAAPGCGDTTGSSVTLGCLVKGYFPEPVTVTWNSGGSSVHTFPALLQSGLYTMSSSV --------------------2--------------------------------------- TVPSSTWPSTVTCSVAHPASSTTVDKKLE ------------2---------------- >ANTIBODY 19G2, ALPHA CHAI; SWP:NA; PDB:1UB6B; AALTQSPVSNPVTLGTSASISCRSTKSLLHSNGITYLYWYLQKPGQSPQLLIYQMSNLAS ---------------------1-------------------------------------- GVPNRFSSSGSGTDFTLRINTVEAEDVGVYYCAQNLELPPTFGAGTKLELKRADAAPTVS -------------------------------1---------------------------- IFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMS -----------------2------------------------------------------ STLTLTKDEYERHNGYTCEATHKTSTSPIVKSF -----------------2--------------- >RIBONUCLEASE MC; SWP:P23540; PDB:1UCDA; FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQQSGTSLTNCPGSPFDITKISH --------------1-------1------------------------2------------ LQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRP ------------------------------2----------------------------- HAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDCT ------------------------------3----------------4----------4- RDTCGANFIF ---3------ >IMMUNOGLOBULIN ALPHA FC R; SWP:P24071; PDB:1UCTA; QEGDFPMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGRRLKTDPEF ---------------------------1-------------------------------- VIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLT --------------1--------------------------------------------- CSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWS 2----------------------------------------------2------------ FPSNALELVVT ----------- >NAWAPRIN; SWP:P60589; PDB:1UDKA; NEKSGSCPDMSMPIPPLGICKTLCNSDSGCPNVQKCCKNGCGFMTCTTPVP ------1------------2---3-----4-----31---2----4----- >CYTOTOXIN 6; SWP:P80245; PDB:1UG4A; LKCNQLIPPFYKTCAAGKNLCYKMFMVAAPKVPVKRGCIDVCPKSSLLVKYVCCNTDRCN --1----------2------1----------------2---3----------34----4- >S-LOCUS POLLEN PROTEIN; SWP:Q9SE17; PDB:1UGLA; NLMKRCTRGFRKLGKCTTLEEEKCKTLYPRGQCTCSDSKMNTHSCDCKSC -----1---------2-------3--------4-2---------3-4--1 >LEUKOCYTE IMMUNOGLOBULIN-; SWP:Q8NHL6; PDB:1UGNA; GHLPKPTLWAEPGSVITQGSPVTLRCQGGQETQEYRLYREKKTAPWITRIPQELVKKGQF -------------------------1---------------------------------- PIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTL --------------1--------------------------------------------- QCDSQVAFDGFILCKEQCLNSSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLL -2-----------3---3-----------------------2------------------ ELLVLG ------ >HIZOPUSPEPSIN I; SWP:Q02016; PDB:1UH7A; AGVGTVPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSRQTKYDP -----------------------------------------------1--1--------- NQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFASGPND ------------------------------------------------------------ GLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFK ------------------------------------------------------------ GSLTTVPIDNSRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNNIAASVARAYGA ------------------------------------------------------------ SDNGDGTYTISCDTSRFKPLVFSINGASFQVSPDSLVFEEFQGQCIAGFGYGNWDFAIIG -----------2--------------------------------2--------------- DTFLKNNYVVFNQGVPEVQIAPVAE ------------------------- >LECTIN-D2; SWP:P83790; PDB:1UHAA; APECGERASGKRCPNGKCCSQWGYCGTTDNYCGQGCQSQCDYWRCGRDFGGRLCEEDMCC ---1--------2----31-----2------3---4---4----5--------6----75 SKYGWCGYSDDHCEDGCQSQCD -----6------7---8---8- >OVALBUMIN; SWP:P01012; PDB:1UHGA; GSIGAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDSTRTQINKVVRFD ------------------------------------------------------------ KLPGFGDIEAQCGTSVNVHSSLRDILNQITKPNDVYSFSLASRLYAEERYPILPEYLQCV -----------1----------------------------------------------1- KELYRGGLEPINFQTAADQARELINSWVESQTNGIIRNVLQPSVDSQTAMVLVNAIVFKG ------------------------------------------------------------ LWEKAFKDEDTQAMPFRVTESKPVQMMYQIGLFRVASMASEKMKILELPFAGTMSMLVLL ------------------------------------------------------------ PDEVSGLEQLESIINFEKLTEWTSSNVMEERKIKVYLPRMKMEEKYNLTSVLMAMGITDV ------------------------------------------------------------ FSSSANLSGISSAELKISQAVHAAHAEINEAGREVVGAEAGVDAASVSEEFRADHPFLFC ------------------------------------------------------------ IKHIATNAVLFFGRCVSP ------------------ >Tissue factor [Precursor]; SWP:P13726; PDB:1UJ3B; QVQLLESGAVLARPGTSVKISCKASGFNIKDYYMHWVKQRPGQGLEWIGGNDPANGHSMY ---------------------1-------------------------------------- DPKFQGRVTITADTSTSTVFMELSSLRSEDTAVYYCARDSGYAMDYWGQGTLVTVSSAST -----------------------------------1------------------------ KGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLY -----------------------2------------------------------------ SLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVES -------------------2----------------- >ADP-RIBOSYLATION FACTOR B; SWP:Q9UJY5; PDB:1UJKA; EPAMEPETLEARINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEW --------------------------------1--------------------------- EAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYS -----------1------------------------------------------------ WTVGLPEEVKIAEAYQMLKKQGIVK ------------------------- >ESTA; SWP:Q6ED33; PDB:1UKCA; SHNAQPVINLGYARYQGVRLEAGVDEFLGMRYASPPIGDLRFRAPQDPPANQTLQSATEY ------------------------------------------------------------ GPICIGLDEEESPGDISEDCLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQ ---1---------------1---------------------------------------- VIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDP ------------------------------------------------------------ DHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRTVSEMEFQFERFVNDT ------------------------------------------------------------ GCSSARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLVPDELYNAFD -2--------2------------------------------------------------- AGNFIKVPVLVGDDTDEGSNFAYNASSSADVSRFFKNNYPNLTSQQLNEINQVYPRGKLL ------------------------------------------------------------ PRHAAYFGASSAAYGDATFTCPGNHVASSAARYLPNSVWNYRVNIIDESNIAGGIGVPHT --------------------3--------------------------------------- FELPAIFGAGSTGTLSSDSSYLTYNAAIIPVTMHYFISFVQTLNPNTYRYATAPEWNTWG ------------------------------------------------------------ NGQRLRLQTNDTAMEAVPESSLQDCAFWKSLTVPMEV ------------------------3------------ >URIDYLATE KINASE; SWP:P15700; PDB:1UKZ; PAFSPDQVSVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKN ------------------------------------------------------------ CIKEGQIVPQEITLALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDIVESKFILFF ------------------------------------------------------------ DCPEDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFETKSKVVRVRCDRS -1------------------------------------------------------1--- VEDVYKDVQDAIRDSL ---------------- >LECTIN-C; SWP:NA; PDB:1ULKA; APVCGVRASGRVCPDGYCCSQWGYCGTTEEYCGKGCQSQCDYNRCGKEFGGKECHDELCC ---1--------2----31-----2------3---4---4----5--------6----75 SQYGWCGNSDGHCGEGCQSQCSYWRCGKDFGGRLCTEDMCCSQYGWCGLTDDHCEDGCQS -----6------7---8---8----9--------a----b9-----a------b---c-- QCDLPT -c---- >ANTIBODY 21H3 L CHAIN; SWP:NA; PDB:1UM5H; VQLQQSGPVLVKPGGSVKMSCKASEYTLTSYLFQWVKQKSGQGLEWIGYIYPYNGGTRYN --------------------1--------------------------------------- EKFRGKATLTSDKSSNTAYLELSSLTSEDSAVYYCARSSMSDPGANWGPGTLVTVSSAST ----------------------------------1------------------------- KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLY -----------------------2------------------------------------ SLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP -------------------2----------------- >ANTIBODY 21H3 L CHAIN; SWP:NA; PDB:1UM5L; LDIQMTQSPSSLSASLGERVSLTCRASQEISGYLYWLQQKPDGTIKRLIYAGSTLDSGVP -----------------------1------------------------------------ KRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPRTFGGGTKVEIKRTVAAPSVFIFP ----------------------------1------------------------------- PSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTL --------------2--------------------------------------------- TLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECG --------------2--------------------- >CONVULXIN ALPHA; SWP:O93426; PDB:1UMRA; GLHCPSDWYYYDQHCYRIFNEEMNWEDAEWFCTKQAKGAHLVSIKSAKEADFVAWMVTQN ---1----------1----------------2---------------------------- IEESFSHVSIGLRVQNKEKQCSTKWSDGSSVSYDNLLDLYITKCSLLKKETGFRKWFVAS -------------------------------------------3---------------- CIGKIPFVCKFPPQC 3-------2------ >Convulxin beta [Precursor; SWP:O93427; PDB:1UMRC; GFCCPSHWSSYDRYCYKVFKQEMTWADAEKFCTQQHTGSHLVSFHSTEEVDFVVKMTHQS ---1----------1----------------2---------------------------- LKSTFFWIGANNIWNKCNWQWSDGTKPEYKEWHEEFECLISRTFDNQWLSAPCSDTYSFV -------------------------------------3--------------3------- CKFEA 2---- >XYLOGLUCAN ENDOTRANSGLYCO; SWP:Q8GZD5; PDB:1UMZA; PVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPG ------------------------------------------------------------ DSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTK ------------------------------------------------------------ EFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGL ------------------------------------------------------------ EKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQ ---------------------1--------1----------------------------- KYTIYNYCTDRSRYPSMPPECKRDRDI -------2------------2------ >ANGIOGENIN; SWP:P03950; PDB:1UN3A; NSRYTHFLTQHYDAKPQGRDDRYCESIMRRRGLTSPCKDINDFIHGNKRSIKAICENKNG -----------------------1------------2-----------------3----- NPHRENLRISKSSFQVTTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDQ ------------------1----------2--------------3---------- >BUBBLE PROTEIN; SWP:P83799; PDB:1UOYA; DTCGSGYNVDQRRTNSGCKAGNGDRHFCGCDRTGVVECKGGKWTEVQDCGSSSCKGTSNG --1--------------2---------3-1-------2----------4----3------ GATC ---4 >PUTATIVE CELLULASE; SWP:Q79G13; PDB:1UOZA; GHIEGRHANPLAGKPFYVDPASAAMVAARNANPPNAELTSVANTPQSYWLDQAFPPATVG ------------------------------------------------------------ GTVARYTGAAQAAGAMPVLTLYGIPHRDCGSYASGGFATGTDYRGWIDAVASGLGSSPAT ----------------------------1------------------------------- IIVEPDALAMADCLSPDQRQERFDLVRYAVDTLTRDPAAAVYVDAGHSRWLSAEAMAARL ------------1----------------------------------------------- NDVGVGRARGFSLNVSNFYTTDEEIGYGEAISGLTNGSHYVIDTSRNGAGPAPDAPLNWC -----------------------------------------------------------2 NPSGRALGAPPTTATAGAHADAYLWIKRPGESDGTCGRGEPQAGRFVSQYAIDLAHNAGQ -----------------------------------2------------------------ >GLCNAC-ALPHA-1,4-GAL-RELE; SWP:Q934G8; PDB:1UPSA; AKDFPANPIEKAGYKLDFSDEFNGPTLDREKWTDYYLPHWCKDPESAKANYRFENGSLVE ----------------------------------------1------------------- YITEDQKPWCPEHDGTVRSSAIMSFDKSWIHNFSGTTDNHERNEWRGYTTKYGYFEIRAK ---------1-------------------------------------------------- LSNTGGGGHQAWWMVGMQDDTNDWFNSKQTGEIDILETFFSKKDTWRIAAYGWNDPNFQT ------------------------------------------------------------ SWTISEDKVPSGDPTSEYHIYAMEWTPTALKFYYDNELFKVIYGSPDYEMGTILNIYTDA ------------------------------------------------------------ GSGAHNDVWPKEWAIDYMRVWKPVDGYKESLNNYLIRNRQTGKFLYIEENNDKVSYGDIT ------------------------------------------------------------ LKNEKNAKWSKEYRDGYTLLKNNETGEYLNIENQTGYIEHGKVPKTWWSAQWSEVPVDGY ------------------------------------------------------------ TRFVNRWKPNMSIHTESYEGVLQYGNVPNTYWTSQWQLIPVE ------------------------------------------ >LEUCINE-SPECIFIC BINDING ; SWP:P04816; PDB:1USGA; DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVA ----------------------------------------------------1------- VANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGL -----------------1------------------------------------------ DSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEK ------------------------------------------------------------ DFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDA ------------------------------------------------------------ AEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPL ------------------------------------------------------------ ALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTKAK ---------------------------------------------- >ORGANIC HYDROPEROXIDE RES; SWP:Q9RTA8; PDB:1USPA; NVYTAEATATGGRAGTTRSSDDRLNLDLSVPAEGGDGGPGTNPEQLFAAGYAACFQGALG -----------------------------------------------------1------ VVSRRQKIDVPADSTITARVGLQKAGLAFALDVELEGHFPGLSREQAEGLHAAHEVCPYS --------------------------------------------------------1--- AATRNNVDVRLKVRE --------------- >HEMAGGLUTININ-NEURAMINIDA; SWP:P32884; PDB:1USRA; GAPIHDPDFIGGIGKELIVDNASDVTSFYPSAFQEHLNFIPAPTTGSGCTRIPSFDMSAT ------------------------------------------------1----------- HYCYTHNVILSGCRDHSHSHQYLALGVLRTTATGRIFFSTLRSISLDDTQNRKSCSVSAT --2---------1-----------------------------------------3----- PLGCDMLCSKVTETEEEDYNSAVPTLMAHGRLGFDGQYHEKDLDVTTLFEDWVANYPGVG ---2---3---------------------------------------------------- GGSFIDGRVWFSVYGGLKPNSPSDTVQEGKYVIYKRYNDTCPDEQDYQIRMAKSSYKPGR ----------------------------------------4------------------- FGGKRIQQAILSIKVSTSLGEDPVLTVPPNTVTLMGAEGRILTVGTSHFLYQRGSSYFSP ------------------------------------------------------------ ALLYPMTVSNKTATLHSPYTFNAFTRPGSIPCQASARCPNSCVTGVYTDPYPLIFYRNHT -------------------------------5-----4---5------------------ LRGVFGTMLDSEQARLNPASAVFDSTSRSRITRVSSSSTKAAYTTSTCFKVVKTNKTYCL -----------------------------------------------6----------6- SIAEISNTLFGEFRIVPLLVEILKNDGV ---------------------------- >SPHENISCIN-2; SWP:P83430; PDB:1UT3A; SFGLCRLRRGFCARGRCRFPSIPIGRCSRFVQCCRRVW ----1------2----3---------2-----13---- >II PURPLE ACID PHOSPHATAS; SWP:P09889; PDB:1UTEA; PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA ------------------------------------------------------------ KDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRF ------------------------------------------------------------ KIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAKEDYVL -------------------1---------------------------------------- VAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAG -----------------1------------------------------------------ NFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSVTYIEASGKSLFKTKLPR ------------------------------------------------------------ RA -- >BOVINE PANCREATIC TRYPSIN; SWP:P00974; PDB:1UUBA; DFCLEPPYTGPCRAAIIRYFYNAKAGLCQTFVYGGCRAKSNNFKSAEDCMRTCGGA --1--------2---------------3-------2------------3---1--- >CD44 ANTIGEN; SWP:P16070; PDB:1UUHA; AQIDLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTAQEKALSIGFETCRYGF --------1------------------------2---------------------3---- IEGHVVIPRIHPNSICAANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDG ---------------3--------------------2----------1------------ PITITIVNRDGTRYVQKGEYRTNPEDIY ---------------------------- >INHIBITOR OF VERTEBRATE L; SWP:Q9HXB1; PDB:1UUZA; EEQPRLFELLGQPGYKATWHAMFKGESDVPKWVSDASGPSSPSTSLSLEGQPYVLANSCK ----------------------------------------------------------1- PHDCGNNRLLVAFRGDKSAAYGLQVSLPDEPAEVMQTPSKYATYRWYGEPSRQVRELLMK ---1-------------------------------------------------------- QLESDPNWKL ---------- >PANCREATITIS-ASSOCIATED P; SWP:Q06141; PDB:1UV0A; ARIRCPKGSKAYGSHCYALFLSPKSWTDADLACQKRPSGNLVSVLSGAEGSFVSSLVKSI ----1----------1----------------2--------------------------- GNSYSYVWIGLHDPTQGTEGEGWEWSSSDVMNYFAWERNPSTISSPGHCASLSRSTAFLR ------------------------------------------------3----------- WKDYNCNVRLPYVCKFTD -----3-------2---- >ARABINAN-ENDO 1,5-ALPHA-L; SWP:Q5MPF4; PDB:1UV4A; AFWGASNELLHDPTMIKEGSSWYALGTGLTEERGLRVLKSSDAKNWTVQKSIFTTPLSWW ------------------------------------------------------------ SNYVPNYGQNQWAPDIQYYNGKYWLYYSVSSFGSNTSAIGLASSTSISSGGWKDEGLVIR ------------------------------------------------------------ STSSNNYNAIDPELTFDKDGNPWLAFGSFWSGIKLTKLDKSTMKPTGSLYSIAARPNNGG ------------------------------------------------------------ ALEAPTLTYQNGYYYLMVSFDKCCDGVNSTYKIAYGRSKSITGPYLDKSGKSMLEGGGTI ----------------------11------------------------------------ LDSGNDQWKGPGGQDIVNGNILVRHAYDANDNGIPKLLINDLNWSSGWPSY --------------------------------------------------- >SERINE PROTEINASE INHIBIT; SWP:Q9NQ38; PDB:1UVGA; DSEMCKDYRVLPRIGYLCPKDLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCEE ----1------------2-------3----------2--1-----------------3-- SSTPGTTAASMPPSDE ---------------- >HLA CLASS II HISTOCOMPATI; SWP:Q30066; PDB:1UVQA; DIVADHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPEFSKFGGFDPQG ------------------------------------------------------------ ALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVN ------------------------------------------------1----------- ITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHW --------------------------------------------1--------------- EP -- >PRION PROTEIN; SWP:P23907; PDB:1UW3A; LGGYMLGSAMSRPLIHFGNDYEDCYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNITV ------------------------------------------------------1----- KQHTVTTTTKGENFTETDIKIMERVVEQMCITQYQRESQAYYQRGA -----------------------------1---------------- >ACETYLCHOLINE-BINDING PRO; SWP:P58154; PDB:1UW6A; EFDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWS ------------------------------------------------------------ DRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQ ------------------------------------------------------------ RFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQK ---1------------1------------------------------------------- KNSVTYSCCPEAYEDVEVSLNFRKKGRS -------22------------------- >FERULOYL ESTERASE A; SWP:O42807; PDB:1UWCA; ASTQGISEDLYNRLVEMATISQAAYADLCNIPSTIIKGEKIYNAQTDINGWILRDDTSKE ----------------------------1------------------------------- IITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQAS ------------------------------2--2-------------------------- QYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSGNQAFASYMNDAFQVSS ------------------------------------------------------------ PETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDPYSAQNTFVCTGDEVQCCEAQGG ----------------------------------------------3------3------ QGVNDAHTTYFGMTSGACTWV -----------------1--- >FIMH PROTEIN; SWP:P08191; PDB:1UWFA; FACKTANGTAIPIGGGSANVYVNLAPVVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQR --1----------------------------------------1---------------- GSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAI ------------------------------------------------------------ KAGSLIAVLILRQTNNYNSDDFQFVWNIYANNDVVVPT -------------------------------------- >ANTIBODY 14D9; SWP:NA; PDB:1UWGL; ELVMTQSPKFMSTSVGDRVSVTCKASQNVGTHVAWYQQKPGQSPKTLIYSASYRYSGVPD ----------------------1------------------------------------- RFTGSGSGTDFTLTIRDVQSEDAAEYFCQQYNLFPVTFGGGTKLEIKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAAVAWKVDNALQSGNSQESVTEQDSADSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE -------------2------------------- >Class 1 outer membrane pr; SWP:Q51220; PDB:1UWXK; GIVMTQTPASQSASLGESVTITCLASQTIGTWLAWYQQKPGKSPQLLIYAATSLADGVPS ----------------------1------------------------------------- RFSGSGSGTKFSFKISSLQAEDFVSYYCQQLSSTP ---------------------------1------- >CARBOXYPEPTIDASE M; SWP:P14384; PDB:1UWYA; LDFNYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFK ------------------------------------------------------------ YVANMHGDETVGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAVKKPD ------------------------------------------------------------ CYYSIGRENYNQYDLNRNFPDAFEYNNVSRQPETVAVMKWLKTETFVLSANLHGGALVAS 1----------------------------------------------------------- YPFDNGVQATGALYSRSLTPDDDVFQYLAHTYASRNPNMKKGDECKNKMNFPNGVTNGYS --------------------------------------------2--------------- WYPLQGGMQDYNYIWAQCFEITLELSCCKYPREEKLPSFWNNNKASLIEYIKQVHLGVKG --------------------------21-------------------------------- QVFDQNGNPLPNVIVEVQDRKHICPYRTNKYGEYYLLLLPGSYIINVTVPGHDPHITKVI -----------------------3------------------------------------ IPEKSQNFSALKKDILLPFQGPSCPMIPLYRNLP -----------------------3---------- >THROMBOSPONDIN-1; SWP:P07996; PDB:1UX6A; ALADNCPLEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGK -----1-------------------1-----------------2---------------- GDACDHDDDNDGIPDDKDNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPDIDDICPENV ---2---------------3-------------------3---------------4---- DISETDFRRFQMIPLDPKGTSQNDPNWVVELVQTVNSDPGLAVGYDEFNAVDFSGTFFIN ------------------------------------------------------------ TERDDDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVKSTTGPGEH ------------------------------------------------------------ LRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADS ------------------------------------------------------------ GPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP -------------------------------4--- >ANGIOTENSIN CONVERTING EN; SWP:P22966; PDB:1UZEA; DEAEASKFVEEYDRTSQVVWNEYAEANWNYNTNITTETSKILLQKNMQIANHTLKYGTQA ------------------------------------------------------------ RKFDVNQLQNTTIKRIIKKVQDLERAALPAQELEEYNKILLDMETTYSVATVCHPNGSCL ----------------------------------------------------1-----1- QLEPDLTNVMATSRKYEDLLWAWEGWRDKAGRAILQFYPKYVELINQAARLNGYVDAGDS ------------------------------------------------------------ WRSMYETPSLEQDLERLFQELQPLYLNLHAYVRRALHRHYGAQHINLEGPIPAHLLGNMW ------------------------------------------------------------ AQTWSNIYDLVVPFPSAPSMDTTEAMLKQGWTPRRMFKEADDFFTSLGLLPVPPEFWNKS ------------------------------------------------------------ MLEKPTDGREVVCHASAWDFYNGKDFRIKQCTTVNLEDLVVAHHEMGHIQYFMQYKDLPV ------------2-----------------2----------------------------- ALREGANPGFHEAIGDVLALSVSTPKHLHSLNLLSSDEHDINFLMKMALDKIAFIPFSYL ------------------------------------------------------------ VDQWRWRVFDGSITKENYNQEWWSLRLKYQGLCPPVPRTQGDFDPGAKFHIPSSVPYIRY ------------------------------------------------------------ FVSFIIQFQFHEALCQAAGHTGPLHKCDIYQSKEAGQRLATAMKLGFSRPWPEAMQLITG --------------3-----------3--------------------------------- QPNMSASAMLSYFKPLLDWLRTENELHGEKLGWPQ ----------------------------------- >MAJOR ENVELOPE PROTEIN E; SWP:P27915; PDB:1UZGA; MRCVGVGNRDFVEGLSGATWVDVVLEHGGCVTTMAKNKPTLDIELQKTEATQLATLRKLC --1--------------------------1-----------------------------2 IEGKITNITTDSRCPTQGEAILPEEQDQNYVCKHTYVDRGWGNGCGLFGKGSLVTCAKFQ -------------3-----------------4------------3----------4---- CLESIEGKIVQHENLKYTVIITVHTGDQHQVGNETQGVTAEITSQASTAEAILPEYGTLG 2----------------------------------------------------------- LECSPRTGLDFNEMILLTMKDKAWMVHRQWFFDLPLPWTSGATTKTPTWNRKELLVTFKN --5--------------------------------------------------------- AHAKKQEVVVLGSQEGAMHTALTGATEIQTSGGTSIFAGHLKCRLKMDKLKLKGMSYAMC ------------------------------------------5----------------6 LNTFVLKKEVSETQHGTILIKVEYKGEDAPCKIPFSTEDGQGKAHNGRLITANPVVTKKE ------------------------------6----------------------------- EPVNIEAEPPFGESNIVIGIGDKALKINWYRK -------------------------------- >FIBRILLIN-1; SWP:P35555; PDB:1UZJA; TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNG -----1-----2----1--------2-3------------3-------4----------- DTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILE ---5------------467---------5--6-----------7---------------- DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD ----8------9----8--------9-a------------a- >FIBRILLIN-1; SWP:P35555; PDB:1UZKA; TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDICSNEIGV -----1-----2----1--------2-3------------3-------4----5------ GVSKASCCCSLGKAWGTPCECPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGL ------467---------5-6-----------7--------------------8------ CQGGKCINTFGSFQCRCPTGYYLNEDTRVCD 9----8--------9-a------------a- >DHURRINASE; SWP:Q41290; PDB:1V02A; RLSPWEIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGD ------------------------------------------------------------ VAADSYHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLE ------------------------------------------------------------ NGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNEPET ------------------------------------------------------------ FCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKGADG ---------------1-----1-------------------------------------- RIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFK ------------------------------------------------------------ EKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPT ------------------------------------------------------------ GNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQR ------------------------------------------------------------ HLSVLKQSIDLGADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWLQ ------------------------------------------------------------ EFNG ---- >SERUM PARAOXONASE/ARYLEST; SWP:P27170; PDB:1V04A; LFDRQKSSFQTRFNVHREVTPVELPNCNLVKGIDNGSEDLEILPNGLAFISSGLKYDKSG --------------------------1--------------------------------- KILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEV ------------------------------------------------------------ FKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWS ------------------------------------------------------------ FVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS ------------------------------------------------------------ FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQDILSEEPKVTVVYAE ------------------------------------------------------------ NGTVLQGSTVAAVYKGKLLIGTVFHKALYCDL -----------------------------1-- >BETA-GLUCOSIDASE; SWP:P49235; PDB:1V08A; MLSPSEIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNSD ------------------------------------------------------------ IGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLE ------------------------------------------------------------ NGIEPYVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFND ------------------------------------------------------------ PQTFTSFSYGTGVFAPGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKR ------------------1-----1----------------------------------- DDTRIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLP ------------------------------------------------------------ FFKDEQKEKLAGSYNMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYASQEVNGPDGKPIG ------------------------------------------------------------ PPMGNPWIYMYPEGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRL ------------------------------------------------------------ DYIQRHIATLKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKES ------------------------------------------------------------ AKWLKEFNTAK ----------- >ENDO-1,4-BETA-XYLANASE A; SWP:P26514; PDB:1V0LA; ESTLGAAAAQSGRYFGTAIASGRLSDSTYTSIAGREFNMVTAENEMKIDATEPQRGQFNF ------------------------------------------------------------ SSADRVYNWAVQNGKQVRGHTLAWHSQQPGWMQSLSGSALRQAMIDHINGVMAHYKGKIV ------------------------------------------------------------ QWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARAADPSAKLCYNDYNVENWTWAK ----------------------------------------------1------------- TQAMYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAALGVDVAITELDIQG -------------------1---------------------------------------- APASTYANVTNDCLAVSRCLGITVWGVRDSDSWRSEQTPLLFNNDGSKKAAYTAVLDALN ------------2-----2----------------------------------------- GG -- >PHOSPHOLIPASE D; SWP:P84147; PDB:1V0WA; SATPHLDAVEQTLRQVSPGLEGDVWERTSGNKLDGSAADPSDWLLQTPGCWGDDKCADRV -------------------------------------------------1-----1---- GTKRLLAKMTENIGNATRTVDISTLAPFPNGAFQDAIVAGLKESAAKGNKLKVRILVGAA ------------------------------------------------------------ PHMNVIPSKYRDELTAKLGKAAENITLNVASMTTSKTAFSWNHSKILVVDGQSALTGGIN ------------------------------------------------------------ SWKDDYLDTTHPVSDVDLALTGPAAGSAGRYLDTLWTWTCQNKSNIASVWFAASGNAGCM ---------------------------------------2------------------2- PTMHKDTNPKASPATGNVPVIAVGGLGVGIKDVDPKSTFRPDLPTASDTKCVVGLHDNTN --------------------------------------------------3--------- ADRDYDTVNPEESALRALVASAKGHIEISQQDLNATCPPLPRYDIRLYDALAAKMAAGVK ------------------------------------3----------------------- VRIVVSDPANRGYSQIKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLATFRSSPNGK --------------------------------------------4--------------- WADGHPYAQHHKLVSVDSSTFYIGSKNLYPSWLQDFGYIVESPEAAKQLDAKLLDPQWKY ------------------------------------------------------------ SQETATVDYARGICNA -------------4-- >NEURAMINIDASE; SWP:Q6XV27; PDB:1V0ZA; RTFLNLTKPLCEVNSWHILSKDNAIRIGEDAHILVTREPYLSCDPQGCRMFALSQGTTLR ----------1-------------------------------2----2------------ GRHANGTIHDRSPFRALISWEMGQAPSPYNTRVECIGWSSTSCHDGMSRMSICMSGPNNN ----------------------------------3-------4---------3------- ASAVVWYGGRPITEIPSWAGNILRTQESECVCHKGVCPVVMTDGPANNRAATKIIYFKEG -----------------------------4-5----5----------------------- KIQKIEELAGNAQHIEECSCYGAGGVIKCICRDNWKGANRPVITIDPEMMTHTSKYLCSK -----------------6-7--------7-6--------------------------8-- VLTDTSRPNDPTNGNCDAPITGGSPDPGVKGFAFLDGENSWLGRTISKDSRSGYEMLKVP ---------------8-------------------------------------------- NAETDIQSGPISNQVIVNNQNWSGYSGAFIDYWANKECFNPCFYVELIRGRPKESSVLWT -------------------------------------1---9------------------ SNSIVALCGSKKRLGSWSWHDGAEIIYFE -------9--------------------- >LACCASE; SWP:Q6H9H7; PDB:1V10A; ATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRA ------------------------------------------------------------ TSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGL --------------------------------------------------------1--- RGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTKAPPAPDTTLINGLGRNSANPSA ------------------------------------------------------------ GQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQ ----------------------1------------------------------------- RYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTALNEA ------------------------------------------------------------ NLIPLINPGAPGNPVPGGADINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTN ------------------------------------------------------------ PNDLLPGGAVISLPANQVIEISIPGGGNHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVV ------------------------------------------------------------ SIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANAISPAWDDLC ------------------------------------------------------------ PKYNANN ------- >HEMAGGLUTININ-NEURAMINIDA; SWP:Q81080; PDB:1V3EA; ITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCIRTPSLVINDL -----------------1------------------------------2----------- IYAYTSNLITRGCQDIGKSYQVLQIGIITVNSDLVPDLNPRISHTFNINDNRKSCSLALL ------------2-----------------------------------------3----- NTDVYQLCSTPKVDERSDYASPGIEDIVLDIVNYDGSISTTRFKNNNISFDQPYAALYPS -------3---------------------------------------------------- VGPGIYYKGKIIFLGYGGLEHPINENVICNTTGCPGKTQRDCNQASHSPWFSDRRMVNSI ----------------------------4----5-------4------------------ IVVDKGLNSIPKLKVWTISMRQNYWGSEGRLLLLGNKIYIYTRSTSWHSKLQLGIIDITD ------------------------------------------------------------ YSDIRIKWTWHNVLSRPGNNECPWGHSCPDGCITGVYTDAYPLNPTGSIVSSVILDSQKS ---------------------6-----5---6---------------------------- RVNPVITYSTATERVNELAILNRTLSAGYTTTSCITHYNKGYCFHIVEINHKSLNTLQPM ---------------------------------7--------7----------------- LFKTEIPKSCS ---------1- >Mucrocetin beta chain; SWP:Q6TPG9; PDB:1V4LB; GFCCPLGWSSYDEHCYQVFQQKMNWEDAEKFCTQQHRGSHLVSFHSSEEVDFVVSKTSPI ---1----------1----------------2---------------------------- LKHDFVWMGLSNVWNECAKEWSDGTKLDYKAWSGQSDCITSKTTDNQWLSMDCSSKRYVV -------------------------------------3--------------3------- CKFQA 2---- >271aa long hypothetical 5; SWP:Q975C3; PDB:1V4NA; EKASIGIIGGSGLYDPQILTNVKEIKVYTPYGEPSDNIILGELEGRKVAFLPRHGRGHRI ------------------------------------------------------------ PPHKINYRANIWALKSLGVKWVIAVSAVGSLRLDYKPGDFVVPNQFIDMTKGRTYTFFDG ------------------------------------------------------------ PTVAHVSMADPFCEHLRSIILDSAKDLGITTHDKGTYICIEGPRFSTRAESIVWKEVFKA ------------1----------------------------------------------- DIIGMTLVPEVNLACEAEMCYSVIGMVTDYDVFADIPVTAEEVTKVMAENTAKVKKLLYE --------------2----1---------------------------------------- VIRRLPEKPDERKCSCCQALKTALVL -------------3-23--------- >Cytochrome c oxidase subu; SWP:P00429; PDB:1V54H; KIKNYQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPI ----------------------1---------2-------------2----------1-- SWVSTWDDRRAEGTFPGKI ------------------- >SPINOXIN; SWP:P84094; PDB:1V56A; IRCSGSRDCYSPCMKQTGCPNAKCINKSCKCYGC --1-----2---3-----3----1----2-4--4 >THIOL:DISULFIDE INTERCHAN; SWP:P77202; PDB:1V58A; ELPAPVKAIEKQGITIIKTFDAPGGMKGYLGKYQDMGVTIYLTPDGKHAISGYMYNEKGE ------------------------------------------------------------ NLSNTLIEKEIYAPAGREMWQRMEQSHWLLDGKKDAPVIVYVFADPFCPYCKQFWQQARP -----------------------------------------------1--1--------- WVDSGKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVPANVSTEQ ------------------------------------------------------------ MKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNIIMGN ------------------------------------------------- >DIHYDROLIPOAMIDE DEHYDROG; SWP:P09624; PDB:1V59A; TINKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSH -------------------------------------------1----1----------- LFHQMHTEAQKRGIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF ------------------------------------------------------------ EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFPGIEIDEEKIVSSTGALSLK ------------------------------------------------------------ EIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLD ------------------------------------------------------------ FKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLE ------------------------------------------------------------ VDKRGRLVIDDQFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTGHGHVNYNNIP ------------------------------------------------------------ SVMYSHPEVAWVGKTEEQLKEAGIDYKIGKFPFAANSRAKTNQDTEGFVKILIDSKTERI ------------------------------------------------------------ LGAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAFKEANMAAYDKAIHC ---------------------------------------------------------- >COBROTOXIN; SWP:P01430; PDB:1V6PA; LECHNQQSSQTPTTTGCSGGETNCYKKRWRDHRGYRTERGCGCPSVKNGIEINCCTTDRC --1-------------2------1----------------2-3----------34----4 NN -- >endo-1,4-beta-D-xylanase ; SWP:P07986; PDB:1V6YA; STLGAAAAQSGRYFGTAIASGKLGDSAYTTIASREFNMVTAENEMKIDATEPQRGQFNFS ------------------------------------------------------------ AGDRVYNWAVQNGKQVRGHTLAWHSQQPGWMQSLSGSTLRQAMIDHINGVMGHYKGKIAQ ------------------------------------------------------------ WDVVNEAFSDDGSGGRRDSNLQRTGNDWIEVAFRTARAADPAAKLCYNDYNIENWTWAKT ---------------------------------------------1-------------- QGVYNMVRDFKQRGVPIDCVGFQSHLIVGQVPGDFRQNLQRFADLGVDVRITELDIRMRT ------------------1----------------------------------------- PSDATKLATQAADYKKVVQACMQVTRCQGVTVWGITDKYSWVPDVFPGEGAALVWDASYA --------------------2-----2--------------------------------- KKPAYAAVMEAFGSRS ---------------- >PSYCHROPHILIC PHOSPHATASE; SWP:Q9S427; PDB:1V73A; TEFDGPYVITPISGQSTAYWICDNRLKTTSIEKLQVNRPEHCGDLPETKLSSEIKQIMPD ---------------------1-------------------1------------------ TYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEV ------------------------------------------------------------ LWFMYQLDQQARDAGGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRPYNKLYGADT ------------------------------------------------------------ EIGQWLRSKNTIIKINDVLYMHGGISSEWISRELTLDKANALYRANVDASKKSLKADDLL ------------------------------------------------------------ NFLFFGNGPTWYRGYFSETFTEAELDTILQHFNVNHIVVGHTSQERVLGLFHNKVIAVDS ------------------------------------------------------------ SIKVGKSGELLLLENNRLIRGLYDGTRETLQ ------------------------------- >PHRIXOTOXIN 1; SWP:P61230; PDB:1V7FA; YCQKWMWTCDSARKCCEGLVCRLWCKKII -1------2-----31----2---3---- >Anti-colorectal carcinoma; SWP:Q65ZQ1; PDB:1V7MH; EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIRSKVNNHAI ---------------------1-------------------------------------- HYAESVKGRFTVSRDDSKSSVYLQMNSLRAEDTGIYYCSGWSFLYWGQGTLVTVSAAKTT -------------------------------------1---------------------- PPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL ----------------------2------------------------------------- SSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD -----------------2------------------- >Thrombopoietin [Precursor; SWP:P40225; PDB:1V7MV; CDLRVLSKLLRDSHVLHSRLSQCPEVHPLPTPVLLPAVDFSLGEWKTQMEETKAQDILGA 1---------------------2------------------------------------- VTLLLEGVMAARGQLGPTCLSSLLGQLSGQVRLLLGALQSLLGTQLPPQGRTTAHKDPNA ------------------2----------------------------------------- IFLSFQHLLRGKVRFLMLVGGSTLC ------------------------1 >EMS16 A CHAIN; SWP:Q7T2Q1; PDB:1V7PA; DFDCPSDWTAYDQHCYLAIGEPQNWYEAERFCTEQAKDGHLVSIQSREEGNFVAQLVSGF ---1----------1----------------2---------------------------- MHRSEIYVWIGLRDRREEQQCNPEWNDGSKIIYVNWKEGESKMCQGLTKWTNFHDWNNIN -------------------------------------------3---------------- CEDLYPFVCKFSAV 3-------2----- >EMS16 B chain; SWP:Q7T2Q0; PDB:1V7PB; CPLGWSSFDQHCYKVFEPVKNWTEAEEICMQQHKGSRLASIHSSEEEAFVSKLASKALKF 1----------1----------------2------------------------------- TSMWIGLNNPWKDCKWEWSDNARFDYKAWKRRPYCTVMVVKPDRIFWFTRGCEKSVSFVC ----------------------------------3----------------3-------2 KFLTDPA ------- >DELTA-PALUTOXIN IT2; SWP:P83257; PDB:1V91A; ACVGDGQRCASWSGPYCCDGYYCSCRSMPYCRCRNNS -1------2-------31----2-4-----4-3---- >THIOREDOXIN; SWP:Q5SI93; PDB:1V98A; GAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTL -------------1--1------------------------------------------- VLFRRGAPVATWVGASPRRVLEERLRPYLEGR -------------------------------- >V-TYPE ATP SYNTHASE SUBUN; SWP:P74902; PDB:1V9MA; FAYLNARVRVRRGTLLKESFFQEALDLSFADFLRLLSETVYGGELAGQGLPDVDRAVLRT ------------------------------------------------------------ QAKLVGDLPRLVTGEAREAVRLLLLRNDLHNLQALLRAKATGRPFEEVLLLPGTLREEVW ------------------------------------------------------------ RQAYEAQDPAGMAQVLAVPGHPLARALRAVLRETQDLARVEALLAKRFFEDVAKPALRDY ------------------------------------------------------------ LALEVDAENLRTAFKLQGSGLAPDAFFLKGGRFVDRVRFARLMEGDYAVLDELSGTPFSG ------------------------------------------------------------ LSGVRDLKALERGLRCVLLKEAKKGVQDPLGVGLVLAYVKEREWEAVRLRLLARRAYFGL ---------------1-------------------------------------------- PRAQVEEEVVCP ----------1- >GLUTAMATE--CYSTEINE LIGAS; SWP:P06980; PDB:1VA6A; MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTGHPEALGSALTHKWITTD ------------------------------------------------------------ FAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMGDERMWPLSMPSYIAEGQDIELAQYG ------------------------------------------------------------ TSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFWQAKSGDISGADAKEKISAGY ------------------------------------------------------------ FRVIRNYYRFGWVIPYLFGASPAISSSFLTSLPFEKTESGMYYLPYATSLRLSDLGYTNK ------------------------------------------------------------ SQSNLGITFNDLYEYVAGLKQAIKTPSEEYAKIGIEKDGKRLQINSNVLQIENELYAPIR ------------------------------------------------------------ PKRVTRSGESPSDALLRGGIEYIEVRSLDINPFSPIGVDEQQVRFLDLFMVWCALADAPE ------------------------------------------------------------ MSSSELACTRVNWNRVILEGRKPGLTLGIGCETAQFPLPQVGKDLFRDLKRVAQTLDSIN -------1----------------------1----------------------------- GGEAYQKVCDELVACFDNPDLTFSARILRSMIDTTGKAFAEAYRNLLREEPLEILREEDF ------------------------------------------------------------ VAEREASERRQQEMEAADTEPFAVWLE --------------------------- >PHOSPHOLIPASE A2; SWP:P51972; PDB:1VAPA; NLFQFEKLIKKMTGKSGMLWYSAYGCYCGWGGQGRPKDATDRCCFVHDCCYGKVTGCNPK -------------------------1-2--------------32----45------6--- MDIYTYSVDNGNIVCGGTNPCKKQICECDRAAAICFRDNLKTYDSKTYWKYPKKNCKEES --------------7-----6----7-5------3--------------------1---- EPC --4 >COBROTOXIN B; SWP:P80958; PDB:1VB0A; LECHNQQSSQTPTTKTCSGETNCYKKWWSDHRGTIIERGCGCPKVKPGVNLNCCTTDRCN --1-------------2-----1----------------2-3----------34----4- N - >TRANSLATION INITIATION FA; SWP:O58185; PDB:1VB5A; LPERVLEILREMKRERIKGASWLAKKGAEAFLTLAEELDESLLEDAIMELREEVVKVNPS ------------------------------------------------------------ MASLYNLARFIPVTNRRDILKSRALEFLRRMEEAKRELASIGAQLIDDGDVIITHSFSST ------------------------------------------------------------ VLEIIRTAKERKKRFKVILTESSPDYEGLHLARELEFSGIEFEVITDAQMGLFCREASIA -----------------------------------------------------1------ IVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAETYKFHPTLKSGDVMLMERDLIR -------------------------1---------------------------------- GNVRIRNVLFDVTPWKYVRGIITELGIVIPPRDI ---------------------------------- >TRYPSIN INHIBITOR BGIT; SWP:Q7M1Q1; PDB:1VBWA; SRCQGKSSWPQLVGSTGAAAKAVIERENPRVRAVIIKVGSGATKDFRCDRVRVWVTERGI --1--------------------------------------------1------------ VARPPTIG -------- >HUMAN VASCULAR CELL ADHES; SWP:P19320; PDB:1VCAA; FKIETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNP ----------------------1----2-------------------------------- VSFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYP ----------1---2-------------------------------------3------- FDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEM --------------------------------------------------3--------- DSVPTVRQAVKELQVYISP ------------------- >HEMOLYTIC LECTIN CEL-III; SWP:Q868M7; PDB:1VCLA; VLCTNPLDIGELRSFKSKQCVDIVGNQGSGNIATYDCDGLSDQQIIICGDGTIRNEARNY --1----------------2----------------2----------1------------ CFTPDGSGNANVMSSPCTLYPEIPSSQRWRQGRRKTFTDNGGIEQVATEIINLASGKCLD 3---------------3----------------------------------------4-- IEGSDGTGDIGVYDCQNLDDQYFYVRSRGPELFYGRLRNEKSDLCLDVEGSDGKGNVLMY --------------4-----------------------------5--------------- SCEDNLDQWFRYYENGEIVNAKSGMCLDVEGSDGSGNVGIYRCDDLRDQMWSRPNAYCNG -5-----------------------6----------------6--------------7-- DYCSFLNKESNKCLDVSGDQGTGDVGTWQCDGLPDQRFKWVFDDWEVPTATWNMVGCDQN --7---------8----------------8--------------------------9--- GKVSQQISNTISFSSTVTAGVAVEVSSTIEKGVIFAKATVSVKVTASLSKAWTNSQSGTT ------------------------------------------------------------ AITYTCDNYDSDEEFTRGCMWQLAIETTEVKSGDLLVWNPQIVKCTRSNTAPGCAPFTKC -----a------------9-------------------------a--------b-----c ANEDCTFCTDI ----c--b--- >PROBABLE DEOXYRIBOSE-PHOS; SWP:Q8ZXK7; PDB:1VCVA; MIHLVDYALLKPYLTVDEAVAGARKAEELGVAAYCVNPIYAPVVRPLLRKVKLCVVADFP ----------------------------------1------------------1------ FGALPTASRIALVSRLAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVIT ------------------------------------------------------------ EEPYLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKE ------------------------------------------------------------ KGYRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTSTPEALL ---------------------------------------------- >RNASE NGR3; SWP:Q9SSV1; PDB:1VD3A; AQDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLWPNYENGKWPQNCDRESSL -----------------1-----12----------------------------3------ DESEISDLISTMEKNWPSLACPSSDGVRFWSHEWLKHGTCSALGERAYFQAALDFRKKSN --------------------2------------------3-------------------- LLENLKNAEITPRNGEHYTLESIKKAIEEGVGHSPYIECNVDTQGNHQIYQVYLCVDKTA --------------------------------------4---------------5----- TDFIDCPIFPHGRGCGSKIEFPPF -----5--------4--------- >ACYLAMINO-ACID-RELEASING ; SWP:Q9YBQ2; PDB:1VE6A; EFSRIVRDVERLIAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSV ------------------------------------------------------------ LDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVVFT ------------------------------------------------------------ GATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL ------------------------------------------------------------ RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTA ------------------------------------------------------------ ITWLGYLPDGRLAVVARREGRSAVFIDGERVEAPQGNHGRVVLWRGKLVTSHTSLSTPPR ------------------------------------------------------------ IVSLPSGEPLLEGGLPEDLRRSIAGSRLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVH ------------------------------------------------------------ GGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAA ------------------------------------------------1----------- RWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRN -------------------------1---------------------------------- FIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFE ------------------------------------------------------------ AHIIPDAGHAINTMEDAVKILLPAVFFLATQRER ---------------------------------- >BETA-AMYLASE; SWP:P36924; PDB:1VEMA; AVNGKGMNPDYKAYLMAPLKKIPEVTNWETFENDLRWAKQNGFYAITVDFWWGDMEKNGD ------------------------------------------------------------ QQFDFSYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDCNVPIPSWVWNQKSDDSLYFKS ------------------------------1-------1--------------------- ETGTVNKETLNPLASDVIRKEYGELYTAFAAAMKPYKDVIAKIYLSGGPAGELRYPSYTT ------------------------------------------------------------ SDGTGYPSRGKFQAYTEFAKSKFRLWVLNKYGSLNEVNKAWGTKLISELAILPPSDGEQF ------------------------------------------------------------ LMNGYLSMYGKDYLEWYQGILENHTKLIGELAHNAFDTTFQVPIGAKIAGVHWQYNNPTI ------------------------------------------------------------ PHGAEKPAGYNDYSHLLDAFKSAKLDVTFTCLEMTDKGSYPEYSMPKTLVQNIATLANEK ------------------------------------------------------------ GIVLNGENALSIGNEEEYKRVAEMAFNYNFAGFTLLRYQDVMYNNSLMGKFKDLLGVTPV ------------------------------------------------------------ MQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYDSHSNDWRGNVVLPAERNIE ------------------------------------------------------------ FKAFIKSKDGTVKSWQTIQQSWNPVPLKTTSHTSSW ------------------------------------ >NEW ANTIGEN RECEPTOR VARI; SWP:Q6X1E7; PDB:1VERA; AWVDQTPRTATKETGESLTINCVLRDASYGLESTGWYRTKLGSTNEQTISIGGRYVETVN ---------------------1-------------------------------------- KGSKSFSLRIRDLRVEDSGTYKCGAFRLSEKGAGTVLTVK ----------------------1----------------- >NEW ANTIGEN RECEPTOR VARI; SWP:Q6X1E6; PDB:1VESA; AWVDQTPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVN ---------------------1-------------------------------------- KGSKSFSLRISDLRVEDSGTYKCQAFYSLPLGDYNYSLLFRGEKGAGTALTVK ----------------------1------------------------------ >F-SPONDIN; SWP:P35446; PDB:1VEXA; GSIPCLLSPWSEWSDCSVTCGKGMRTRQRMLKSLAELGDCNEDLEQAEKCMLPECP ----1----------2---3-------------------1---------2----3- >SECRETORY PROTEIN; SWP:O35744; PDB:1VF8A; YQLMCYYTSWAKDRPIEGSFKPGNIDPCLCTHLIYAFAGMQNNEITYTHEQDLRDYEALN ----1----------------------2-1------------------------------ GLKDKNTELKTLLAIGGWKFGPAPFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQY ------------------------------------------------------------ PGSRGSPPKDKHLFSVLVKEMRKAFEEESVEKDIPRLLLTSTGAGIIDVIKSGYKIPELS ------------------------------------------------------------ QSLDYIQVMTYDLHDPKDGYTGENSPLYKSPYDIGKSADLNVDSIISYWKDHGAASEKLI ------------------------------------------------------------ VGFPAYGHTFILSDPSKTGIGAPTISTGPPGKYTDESGLLAYYEVCTFLNEGATEVWDAP ---------------------------------------------3-------------- QEVPYAYQGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDDFSGSFCHQRHFPLTS --------------------------------------------------3--------- TLKGDLNIHSASC ------------2 >VANADIUM-BINDING PROTEIN ; SWP:Q86BW2; PDB:1VFIA; ISEFAPVDCKGQCTTPCEPLTACKEKCAESCETSADKKTCRRNCKKADCEPQDKVCDACR --------1---2---3-----4---5---6--------6---5----4------3--2- MKCHKACRAANCASECPKHEHKSDTCRACMKTNCK --1---7----8---9---------9--8----7- >TR1.9 FAB; SWP:GC1_HUMAN; PDB:1VGEH; QVKLLEQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTK ----------------------1------------------------------------- YSQKFRGRVTFTRDTSATTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTV ------------------------------------1----------------------- SSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQ ----------------------------2------------------------------- SSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC ------------------------2-------------------- >BETA-2-MICROGLOBULIN; SWP:P01902; PDB:1VGKA; GPHSLRYFVTAVSRPGLGEPRFIAVGYVDDTQFVRFDSDADNPRFEPRAPWMEQEGPEYW ------------------------------------------------------------ EEQTQRAKSDEQWFRVSLRTAQRYYNQSKGGSHTFQRMFGCDVGSDWRLLRGYQQFAYDG ----------------------------------------1------------------- RDYIALNEDLKTWTAADTAALITRRKWEQAGDAEYYRAYLEGECVEWLRRYLELGNETLL -------------------------------------------1---------------- RTDSPKAHVTYHPRSQVDVTLRCWALGFYPADITLTWQLNGEDLTQDMELVETRPAGDGT ----------------------2------------------------------------- FQKWAAVVVPLGKEQNYTCHVHHKGLPEPLTLRW ------------------2--------------- >PROTEIN YEBR; SWP:P76270; PDB:1VHMA; NKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDINWAGFYLLEDDTLVLGPFQ ------------------------------------------------------------ GKIACVRIPVGRGVCGTAVARNQVQRIEDVHVFDGHIACDAASNSEIVLPLVVKNQIIGV ----1---------------------------------1--------------------- LDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKKFF --------------------------------------- >HYPOTHETICAL PROTEIN AF15; SWP:O28751; PDB:1VHUA; EVLFEAKVGDITLKLAQGDITQYPAKAIVNAANKRLEHGGGVAYAIAKACAGDAGLYTEI ------------------------------------------------------------ SKKAREQFGRDYIDHGEVVVTPANLEERGIKYVFHTVGPICSGWSEELKEKLYKAFLGPL ----------------------------------------1------------------- EKAEEGVESIAFPAVSAGIYGCDLEKVVETFLEAVKNFKGSAVKEVALVIYDRKSAEVAL ---------------------1-------------------------------------- KVFERSL ------- >NEUROTOXIN B-IV; SWP:P01525; PDB:1VIB; ASATWGAAYACENNCRKKYDLCIRCQGKWAGKRGKCAAHCIIQKNNCKGKCKKE ----------1---2------3--4----------4---3------2---1--- >PHOSPHOLIPASE A2; SWP:P81458; PDB:1VIP; NLFQFAEMIVKMTGKNPLSSYSDYGCYCGWGGKGKPQDATDRCCFVHDCCYEKVKSCKPK -------------------------1-2--------------32----45------6--- LSLYSYSFQNGGIVCGDNHSCKRAVCECDRVAATCFRDNLNTYDKKYHNYPPSQCTGTEQ --------------7-----6----7-5------3-------------------1----- C 4 >FERREDOXIN(A); SWP:P46797; PDB:1VJW; MKVRVDADACIGCGVCENLCPDVFQLGDDGKAKVLQPETDLPCAKDAADSCPTGAISVE -------------------1----------------------1---------------- >HYPOTHETICAL PROTEIN; SWP:NA; PDB:1VKBA; HMAHIFVYGTLKRGQPNHKVMLDHSHGLAAFRGRGCTVESFPLVIAGEHNIPWLLYLPGK -----------------------------------1------------------------ GHCVTGEIYEVDEQMLRFLDDFEDCPSMYQRTALQVQVLEWEDPGDSVQCFVYTTATYAP --1--------------------------------------------------------- EWLFLPYHESYDSEGPHGLRYNPRENR --------------------------- >carboxymuconolactone deca; SWP:Q9X1V5; PDB:1VKEA; KKFVEARRELNEKVSRGTLNTKRFFNLDSAVYRPGKLDVKTKELMGLVASTVLRCDDCIR ------------------------------------------------------1--1-- YHLVRCVQEGASDEEIFEALDIALVVGGSIVIPHLRRAVGFLEELREMEKNGETISL --------------------------------------------------------- >heparan sulfate (glucosam; SWP:O35310; PDB:1VKJA; STQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSQGLGWYLTQMPF ------------------------------------------------------------ SSPHQLTVEKTPAYFTSPKVPERIHSMNPTIRLLLILRDPSERVLSDYTQVLYNHLQKHK ------------------------------------------------------------ PYPPIEDLLMRDGRLNLDYKALNRSLYHAHMLNWLRFFPLGHIHIVDGDRLIRDPFPEIQ ------------------------------------------------------------ KVERFLKLSPQINASNFYFNKTKGFYCLRDSGKDRCLHESKGRAHPQVDPKLLDKLHEYF --------------------------1--------1------------------------ HEPNKKFFKLVGRTFDWH ------------------ >PUTATIVE NITROREDUCTASE; SWP:NA; PDB:1VKWA; HNIFEAIENRHSVRDFLERKPERVKDDIENLLVKFITKKLDWKINLSSFPSYIYAKAEKH ------------------------------------------------------------ FDELVEYGFQGEQIVLFLTAQGFGTCWARSPHPDVPYIIVFGYPRTRNFTRKRRPITSFL ------------------------------------------------------------ ENDLEELPPEIVKIVETILAPSALNRQPWKIKYTGGELCISSERPVDLGIALSHAYLTAR --------------------------------------1--------------------- EIFKREPVIQKRGEDTYCLILNP -----------------1----- >VIRAL INTERLEUKIN-10; SWP:P03180; PDB:1VLK; CDNFPQMLRDLRDAFSRVKTFFQTKDEVDNLLLKESLLEDFKGYLGCQALSEMIQFYLEE 1---------------------------------------------2------------- VMPQAENQDPEAKDHVNSLGENLKTLRLRLRRCHRFLPCENKSKAVEQIKNAFNKLQEKG --------------------------------1-----2--------------------- IYKAMSEFDIFINYIEAYMTIK ---------------------- >VITELLINE MEMBRANE OUTER ; SWP:P41366; PDB:1VMOA; RTREYTSVITVPNGGHWGKWGIRQFCHSGYANGFALKVEPSQFGRDDTALNGIRLRCLDG -------------------------1------------------------------1--- SVIESLVGKWGTWTSFLVCPTGYLVSFSLRSEKSQGGGDDTAANNIQFRCSDEAVLVGDG ------------------2------------------------------2---------- LSWGRFGPWSKRCKICGLQTKVESPQGLRDDTALNNVRFFCCK ------------3--4------------------------34- >NEUROTOXIN; SWP:P01492; PDB:1VNA; KEGYLVKKSDGCKYDCFWLGKNEHCNTECKAKNQGGSYGYCYAFACWCEGLPESTPTYPL -----------1---2--------3---4-----------2----3-4------------ PNKSC ----1 >n/a; SWP:P26332; PDB:1VSGA; AAEKGFKQAFWQPLCQVSEELDDQPKGALFTLQAAASKIQKMRDAALRASIYAEINHGTN --------------1--------------------------------------------- RAKAAVIVANHYAMKADSGLEALKQTLSSQEVTATATASYLKGRIDEYLNLLLQTKESGT ------------------------------------------------------------ SGCMMDTSGTNTVTKAGGTIGGVPCKLQLSPIQPKRPAATYLGKAGYVGLTRQADAANNF --2---------------------1----------------------------------- HDNDAECRLASGHNTNGLGKSGQLSAAVTMAAGYVTVANSQTAVTVQALDALQEASGAAH ------2----------------------------------------------------- QPWIDAWKAKKALTGAETAEFRNETAGIAGKTGVTKLVEEALLKKKDSEASEIQTELKKY ------------------------------------------------------------ FSGHENEQWTAIEKLISEQPVAQNLVGDNQPTKLGELEGNAKLTTILAYYRMETAGKFEV ------------------------------------------------------------ LT -- >DELTA-ATRACOTOXIN-HV1; SWP:P13494; PDB:1VTX; CAKKRNWCGKTEDCCCPMKCVYAWYNEQGSCQSTISALWKKC 1------2-----314---2----------3----------4 >BUCAIN; SWP:P83346; PDB:1VYCA; RKCLIKYSQANESSKTCPSGQLLCLKKWEIGNPSGKEVKRGCVATCPKPWKNEIIQCCAK ----------------1------------------------1---2----------23-- DKCNA --3-- >AVIDIN; SWP:P02701; PDB:1VYOA; KCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVTATSNEIKESPLHGTQNTINKRTQP -1---------------------------------------------------------- TFGFTVNWKFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGINIFTR --------------------1--------------------------------------- L - >OSTEOCALCIN; SWP:Q800Y1; PDB:1VZMA; KELTLAQTSLRVCTNMACDMADAQGIVAAYQAFYGPIPF ------------1----1--------------------- >ACYL-COA OXIDASE; SWP:O65202; PDB:1W07A; EGIDHLADERNKAEFDVEDMKIVWAGSRHAFEVSDRIARLVASDPVFEKSNRARLSRKEL ------------------------------------------------------------ FKSTLRKCAHAFKRIIELRLNEEEAGRLRHFIDQPAYVDLHWGMFVPAIKGQGTEEQQKK ------------------------------------------------------------ WLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGK ------------------------------------------------------------ VSTHAVVYARLITNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGF ------------------------------------------------------------ LMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQTIVADASNALSRAVC ------------------------------------------------------------ IATRYSAVRRQFGAGIETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAA ------------------------------------------------------------ SDFATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLWCSGLPELFAVYVPACTYE ------------------------------------------------------------ GDNVVLQLQVARFLMKTVAQLGSGKVPVGTTAYMGRAAHLLQCRSGVQKAEDWLNPDVVL ------------------------------------------1----------------- EAFEARALRMAVTCAKNLSKFENQEQGFQELLADLVEAAIAHCQLIVVSKFIAKLEQDIG ------------------------------------------------------------ GKGVKKQLNNLCYIYALYLLHKHLGDFLSTNCITPKQASLANDQLRSLYTQVRPNAVALV -------------------------------1---------------------------- DAFNYTDHYLNSVLGRYDGNVYPKLFEEALKDPLNDSVVPDGYQEYLRPVLQQQL ------------------------------------------------------- >LEVANSUCRASE; SWP:Q5I5I3; PDB:1W18A; GVPGFPLPSIHTQQAYDPQSDFTARWTRADALQIKAHSDATVAAGQNSLPAQLTMPNIPA ------------------------------------------------------------ DFPVINPDVWVWDTWTLIDKHADQFSYNGWEVIFCLTADPNAGYGFDDRHVHARIGFFYR ------------------------------------------------------------ RAGIPASRRPVNGGWTYGGHLFPDGASAQVYAGQTYTNQAEWSGSSRLMQIHGNTVSVFY ------------------------------------------------------------ TDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFTAHTPLLQPDGVLYQNGAQN ------------------------------------------------------------ EFFNFRDPFTFEDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDS ------------------------------------1----------------------- GAYYQKANIGLAIATDSTLSKWKFLSPLISANCVNDQTERPQVYLHNGKYYIFTISHRTT --------------------------------1--------------------------- FAAGVDGPDGVYGFVGDGIRSDFQPMNYGSGLTMGNPTDLNTAAGTDFDPSPDQNPRAFQ ------------------------------------------------------------ SYSHYVMPGGLVESFIDTVENRRGGTLAPTVRVRIAQNASAVDLRYGNGGLGGYGDIPAN ------------------------------------------------------------ RADVNIAGFIQD ------------ >PHOSPHATIDYLINOSITOL 3-KI; SWP:P35169; PDB:1W1NA; NELDVPEQVDKLIQQATSIERLCQHYIGWCPFW ----------------------1------1--- >CONGLUTIN; SWP:Q647G9; PDB:1W2QA; GPMRRERGRQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRC ---------------1-----------2-------------------------------2 CDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLD 3-----------1-4----------5----------------------3-------4--- VSGGRCS -----5- >ENDO-1,4-BETA-XYLANASE A ; SWP:P14768; PDB:1W32A; GLASLADFPIGVAVAASGGNADIFTSSARQNIVRAEFNQITAENIMKMSYMYSGSNFSFT ------------------------------------------------------------ NSDRLVSWAAQNGQTVHGHALVWHPSYQLPNWASDSNANFRQDFARHIDTVAAHFAGQVK ------------------------------------------------------------ SWDVVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYIDEAFRRARAADPTAELYYND ------------------------------------------------------------ FNTEENGAKTTALVNLVQRLLNNGVPIDGVGFQMHVMNDYPSIANIRQAMQKIVALSPTL ------------------------------------------------------------ KIKITELDVRLNNPYDGNSSNNYTNRNDCAVSCAGLDRQKARYKEIVQAYLEVVPPGRRG ----------------------------1---1--------------------------- GITVWGIADPDSWLYTHQNLPDWPLLFNDNLQPKPAYQGVVEALSG ---------------------------------------------- >2-KETO-3-DEOXY GLUCONATE ; SWP:Q97U28; PDB:1W3IA; PEIITPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKA ------------------------------------------------------------ VYDVTNKIIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCE ----------------------------------------------------------1- VSPHPVYLYNYPTATGKDIDAKVAKEIGCFTGVKDTIENIIHTLDYKRLNPNMLVYSGSD ----------------------------1------------------------------- MLIATVASTGLDGNVAAGSNYLPEVTVTIKKLAMERKIDEALKLQFLHDEVIEASRIFGS ------------------------------------------------------------ LSSNYVLTKYFQGYDLGYPRPPIFPLDDEEERQLIKKVEGIRAKLVELKILKE ----------------------------------------------------- >ANNEXIN A8; SWP:P13928; PDB:1W3WA; SSSHFNPDPDAETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAKSFKAQFGKDLTETLK ------------------------------------------------------------ SELSGKFERLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYE ------------------------------------------------------------ EDYGSSLEEDIQADTSGYLERILVCLLQGSRDDVSSFVDPALALQDAQDLYAAGEKIRGT ------------------------1----------------------------------- DEMKFITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCTQNLHS ---------1-------------------------------------------------- YFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKKMYGKTLSSMIMEDTSGDYK ------------------------------------------------------------ NALLSLVGSDP ----------- >THIOREDOXIN, MITOCHONDRIA; SWP:NA; PDB:1W4VA; STTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDI -------------------------------1--1------------------------- DDHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLIG ------------------------------------------------ >Pancreatic lipase-related; SWP:Q95KP4; PDB:1W52X; KEVCYTPLGCFSDDKPWAGTLQRPLKSLPWSPEEVNTRFLLYTNKNPDSYQLITARDVAT ---1-----1-------------------------------------------------- IKSSNFQSSRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQAV -------------------------------2----------2----------------- QNIRIVGAETAYLIQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPA ------------------------------------------------------------ EPCFQDASEEVRLDPSDAQFVDVIHTDASPMLPSLGFGMSQKVGHMDFFPNGGKQMPGCK ----------------------------------------------------------3- RSFIDINGIWQGAQDYLACNHLKSFEYYSSSILNPDGFLAYPCDSYDKFQENGCFPCPAG ------------------3-----------------------4----------4--5--- GCPKMGHYADQYKEKTSAVEQTFFLNTGESGDYTSWRYRVSITLAGSGKANGYLKVTLRG -5---------------------------------------------------------- SNGNSKQYEIFKGSLQPDSSYTLDVDVNFIIGKIQEVKFVWNKTVLNLSKPQLGASRITV ------------------------------------------------------------ QSGADGTEYKFCGSGTVQDNVEQSLYPC -----------6---------------6 >PHENYLETHYLAMINE OXIDASE; SWP:P46881; PDB:1W6GA; ASPFRLASAGEISEVQGILRTAGLLGPEKRIAYLGVLDPARGAGSEAEDRRFRVFIHDVS ------------------------------------------------------------ GARPQEVTVSVTNGTVISAVELDTAATGELPVLEEEFEVVEQLLATDERWLKALAARNLD ------------------------------------------------------------ VSKVRVAPLSAGVFEYAEERGRRILRGLAFVQDFPEDSAWAHPVDGLVAYVDVVSKEVTR ------------------------------------------------------------ VIDTGVFPVPAEHGNYTDPELTGPLRTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVG ------------------------------------------------------------ FDVREGVVLHNIAFRDGDRLRPIINRASIAEMVVPYGDPSPIRSWQNYFDTGEYLVGQYA ------------------------------------------------------------ NSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGILAKHSDLWSGINYTRRN --------1-------------------------1------------------------- RRMVISFFTTIGNDYGFYWYLYLDGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGLGAP ------------------------------------------------------------ FHQHIFSARLDMAIDGFTNRVEEEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADA ------------------------------------------------------------ RTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIARRAAFATKDLWVTRYADD ------------------------------------------------------------ ERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGF ------------------------------------------------------------ KLRPEGFFDRSPVLDVPAN ------------------- >METHANOL DEHYDROGENASE SU; SWP:P16027; PDB:1W6SA; NDKLVELSKSDDNWVMPGKNYDSNNFSDLKQINKGNVKQLRPAWTFSTGLLNGHEGAPLV ------------------------------------------------------------ VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKT ------------------------------------------11---------------- PALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGV ------------------------------------------------------------ RGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGG ------------------------------------------------------------ TNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD ------------------------------------------------------------ EWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKS ------------------------------------------------------------ VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEP -------------------------2----------------------------2----- FMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTM ------------------------------------------------------------ ATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIYYGVGGW ------------------------------------------------------------ PGVGLVFDLADPTAGLGAVGAFKKLANYTQMGGGVVVFSLDGKGPYDDPNVGEWKS -------------------------------------------------------- >Methanol dehydrogenase su; SWP:P14775; PDB:1W6SB; YDGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVENFKK -----1-----1------------------------------------------------ TGKFEYDVAKISA ------------- >LYSYL OXIDASE; SWP:Q96X16; PDB:1W7CA; AECVSNENVEIEAPKTNIWTSLAKEEVQEVLDLLHSTYNITEVTKADFFSNYVLWIETLK --1--------------------------------------------------------- PNKTEALTYLDEDGDLPPRNARTVVYFGEGEEGYFEELKVGPLPVSDETTIEPLSFYNTN ------------------------------------------------------------ GKSKLPFEVGHLDRIKSAAKSSFLNKNLNTTIMRDVLEGLIGVPYEDMGCHSAAPQLHDP -------------------------------------------------2---------- ATGATVDYGTCNINTENDAENLVPTGFFFKFDMTGRDVSQWKMLEYIYNNKVYTSAEELY ----------2------------------------------------------------- EAMQKDDFVTLPKIDVDNLDWTVIQRNDSAPVRHLDDRKSPRLVEPEGRRWAYDGDEEYF ------------------------------------------------------------ SWMDWGFYTSWSRDTGISFYDITFKGERIVYELSLQELIAEYGSDDPFNQHTFYSDISYG ------------------------------------------------------------ VGNRFSLVPGYDCPSTAGYFTTDTFEYDEFYNRTLSYCVFENQEDYSLLRHTGASYSAIT ------------3------------------------3---------------------- QNPTLNVRFISTIGNDYNFLYKFFLDGTLEVSVRAAGYIQAGYWNPETSAPYGLKIHDVL ------------------------------------------------------------ SGSFHDHVLNYKVDLDVGGTKNRASQYVMKDVDVEYPWAPGTVYNTKQIAREVFENEDFN ------------------------------------------------------------ GINWPENGQGILLIESAEETNSFGNPRAYNIMPGGGGVHRIVKNSRSGPETQNWARSNLF ------------------------------------------------------------ LTKHKDTELRSSTALNTNALYDPPVNFNAFLDDESLDGEDIVAWVNLGLHHLPNSNDLPN ------------------------------------------------------------ TIFSTAHASFMLTPFNYFDSENSRDTTQQVFYTYDDETEESNWEFYGNDWSSCGVEVAEP ----------------------------------------------------1------- NFEDYTYGRGTRINKK ---------------- >APICAL MEMBRANE ANTIGEN 1; SWP:O61130; PDB:1W81A; SIPTVERSTRMSNPWKAFMEKYDIERTHSSGVRVDLGEDAEVENAKYRIPAGRCPVFGKG -----------------------------------------------------1------ IVIENSDVSFLRPVATGDQKLKDGGFAFPNANDHISPMTLANLKERYKDNVEMMKLNDIA ------------------------------------------------------------ LCRTHAASFVQNSNYRHPAVYDEKEKTCHMLYLSAQENMGFCFKPDKDESFENLVYLSKN -2-------------------------2-------------------------------- VRNDWDKKCPRKNLGNAKFGLWVDGNCEEIPYVKEVEAEDLRECNRIVFGASASDQFKSK --------1-----------------3----------------4---------------- GRGFNWANFDSVKKKCYIFNTKPTCLINDKNFIATTALSHPQEVDLEFPCSIYKDEIERE ---------------4--------3------------------------5---------- IKGERIVLPRIFISNDKESIKCPCEPERISQSTCNFYVCNCVEKRAEIKENNQVVIKEEF ---------------------6-7---------5----6-7------------------- RDYY ---- >SLIT PROTEIN; SWP:P24014; PDB:1W8AA; DCPAMCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLE -1---2-1------2--------------------------------------------- LKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPG -------------------------------------------------------3---- SFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDVQIKDLPHS -------------------4-5--------------------4----------------- EFKCSSEGC ---5----3 >APICAL MEMBRANE ANTIGEN 1; SWP:O61130; PDB:1W8KA; PTVERSTRMSNPWKAFMEKYDIERTHSSGVRVDLGEDAEVENAKYRIPAGRCPVFGKGIV ---------------------------------------------------1-------- IENSDVSFLRPVATGGFAFPNANDHISPMTLANLKERYKDNVEMMKLNDIALCRTHAASF ----------------------------------------------------2------- VSNYRHPAVYDEKEKTCHMLYLSAQENMYCSDAVFCFKPDKDESFENLVYLSKNVRNDWD ----------------2------------3-----3------------------------ KKCPRKNLGNAKFGLWVDGNCEEIPYVKEVEAEDLRECNRIVFGASASDQPTFKSKGRGF --1-----------------4----------------5---------------------- NWANFDSVKKKCYIFNTKPTCLINDKNFIATTALSHPQEVDLEFPCSIYKDEIEREIKKQ -----------5--------4------------------------6-------------- ERIVLPRIFISNDKESIKCPCEPERISQSTCNFYVCNCVEKRAEIKENNQVVIKEEFRDY ------------------7-8---------6----7-8---------------------- YE -- >BACTERIAL SIALIDASE; SWP:Q02834; PDB:1W8OA; GEPLYTEQDLAVNGREGFPNYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTD ------------------------------------------------------------ GGRTWGEQQVVSAGQTTAPIKGFSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPAD ------------------------------------------------------------ PNVLHANVATSTDGGLTWSHRTITADITPDPGWRSRFAASGEGIQLRYGPHAGRLIQQYT ------------------------------------------------------------ IINAAGAFQAVSVYSDDHGRTWRAGEAVGVGMDENKTVELSDGRVLLNSRDSARSGYRKV ------------------------------------------------------------ AVSTDGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPAGSARAKVLLFSNAASQTSRSQGT ------------------------------------------------------------ IRMSCDDGQTWPVSKVFQPGSMSYSTLTALPDGTYGLLYEPGTGIRYANFNLAWLGGICA ----1-----------------------------------------------------1- PFTIPDVALEPGQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQGSVEPLMPGRQAKGQ ------------------------------------------------------------ VTITVPAGTTPGRYRVGATLRTSAGNASTTFTVTVGLLDQARMSIADVDSEETAREDGRA ------------------------------------------------------------ SNVIDGNPSTFWHTEWSRADAPGYPHRISLDLGGTHTISGLQYTRRQNSANEQVADYEIY ------------------------------------------------------------ TSLNGTTWDGPVASGRFTTSLAPQRAVFPARDARYIRLVALSEQTGHKYAAVAELEVEGQ ------------------------------------------------------------ R - >PROBABLE BRIX-DOMAIN RIBO; SWP:O26776; PDB:1W94A; HLLTTSRKPSQRTRSFSQRLSRIGWRYINRGKSLRDVLIEARGPVAVVSERHGNPARITF ------------------------------------------------------------ LDERGGERGYILFNPSFEKKPELADKAVRVSSCPPGSEGLCNLGLEVDESSSRDAWSIRT --------------------------------1-------1------------------- DEEYAWVELDARGTPAGFKLLIRDFRVG ---------------------------- >2-KETO-3-DEOXY-6-PHOSPHOG; SWP:Q9WXS1; PDB:1WA3A; KMEELFKKHKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKEK ------------------------------------------------------------ GAIIGAGTVTSVEQCRKAVESGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAM ------------------------------------------------------------ KLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSAL -------------------------------------------1---------------- VKGTPDEVREKAKAFVEKIRGC ---------------------1 >GROWTH/DIFFERENTIATION FA; SWP:P43026; PDB:1WAQA; ARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMD --1----------------------------2---3------------------------ PESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR --------1-------------------------------2-3- >CHITOTRIOSIDASE 1; SWP:Q13231; PDB:1WB0A; AKLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLSTTEWNDETLYQEFN ----1------------------------1------------------------------ GLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEY ------------------------------------------------------------ PGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIA ------------------------------------------------------------ QNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLI ------------------------------------------------------------ LGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQK ---------------------------------------------2-------------- VPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTL ------------------------------------------------2----------- RQELS ----- >WINGED BEAN ALBUMIN 1; SWP:P15465; PDB:1WBA; DDPVYDAEGNKLVNRGKYTIVSFSDGAGIDVVATGNENPEDPLSIVKSTRNIMYATSISS ------------------------------------------------------------ EDKTPPQPRNILENMRLKINFATDPHKGDVWSVVDFQPDGQQLKLAGRYPNQVKGAFTIQ ------------------------------------------------------------ KGSNTPRTYKLLFCPVGSPCKNIGISTDPEGKKRLVVSYQSDPLVVKFHRH -------------1-----1------------------------------- >AVIDIN-RELATED PROTEIN 2; SWP:P56732; PDB:1WBIA; ARKCSLTGEWDNDLGSIMTIGAVNDNGEFDGTYITAVADNPGNITLSPLLGIQHKRASQP ---1-------------------------------------------------------- TFGFTVHWNFSESTSVFVGQCFVDRSGKEVLKTKWLQRLAVDDISDDWIATRVGNNDFTR --------------------1--------------------------------------- QHT --- >BETA-2MICROGLOBULIN; SWP:P01899; PDB:1WBXA; PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWE ------------------------------------------------------------ RETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGR ---------------------------------------1-------------------- DYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLR ------------------------------------------1----------------- TDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTF ---------------------2-------------------------------------- QKWASVVVPLGKEQNYTCRVYH -----------------2---- >ENDOGLUCANASE; SWP:P82186; PDB:1WC2A; NQKCSGNPRRYNGKSCASTTNYHDSHKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSG ---1-----------1-------------2-3---------------------------- NKGWCGQHCGQCIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYG ----4---2--5------------------------------6---------6------- GHNKYGYELHLDLENGRSQVTGMGWNNPETTWEVVNCDSEHNHDHRTPSNSMYGQCQCAH ------------------------------------5------------------3-4-- >NON-CATALYTIC PROTEIN 1; SWP:Q9C171; PDB:1WCUA; VSATYSVVYETGKKLNSGFDNWGWDSKMSFKDNSLVLTADPDEYGAISLKNLNSNYYGKG ------------------------------------------------------------ GCIYLQVKTETEGLVKVQGVRGYDETEAFNVGSFRSSSDFTEYKFEVDDEYQFDRIIVQD -1---------------------------------------------------------- GPASNIPIYMRYIIYSTGSCDDHILEHHH -------------------1--------- >ALPHA-L-ARABINOFURANOSIDA; SWP:Q9C4B1; PDB:1WD3A; MGPCDIYEAGDTPCVAAHSTTRALYSSFSGALYQLQRGSDDTTTTISPLTAGGIADASAQ ---1---------1---------------------------------------------- DTFCANTTCLITIIYDQSGNGNHLTQAPPGGFDGPDTDGYDNLASAIGAPVTLNGQKAYG ---2----2--------------------------------------------------- VFMSPGTGYRNNEATGTATGDEAEGMYAVLDGTHYNDACCFDYGNAETSSTDTGAGHMEA --------------------------------------33-------------------- IYLGNSTTWGYGAGDGPWIMVDMENNLFSGADEGYNSGDPSISYRFVTAAVKGGADKWAI ------------------------------------------------------------ RGANAASGSLSTYYSGARPDYSGYNPMSKEGAIILGIGGDNSNGAQGTFYEGVMTSGYPS ------------------------------------------------------------ DDTENSVQENIVAAKYVVGSLVSGPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVD ------------------------------------------------------------ DDSSTTLKEEASWTVVTGLANSQCFSFESVDTPGSYIRHYNFELLLNANDGTKQFHEDAT -----------------------4------------------------------------ FCPQAALNGEGTSLRSWSYPTRYFRHYENVLYAASNGGVQTFDSKTSFNNDVSFEIETAF -4---------------------------------------------------------- AS -- >PROBABLE DIPHTHINE SYNTHA; SWP:Q9YDI2; PDB:1WDEA; EAVTLLLVGWGYAPGQTLEALDAVRRADVVYVESYTPGSSWLYKSVVEAAGEARVVEASR ------------------------------------------------------------ RDLEERSREIVSRALDAVVAVVTAGDPVATTHSSLAAEALEAGVAVRYIPGVSGVQAARG ------------------------------------------------------------ ATLSFYRFGGTVTLPGPWRGVTPISVARRIYLNLCAGLHTTALLDVDERGVQLSPGQGVS ----------------------------------1------------------------- LLLEADREYAREAGAPALLARLPSVLVEAGAGGGHRVLYWSSLERLSTADVEGGVYSIVI ------------------------------------------------------------ PARLSGVEEWLLAAASGQRRPLEYDRSVYETVEENCKKGVYEPV -----------------------------------1-------- >2-5A-DEPENDENT RIBONUCLEA; SWP:Q05823; PDB:1WDYA; AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR ------------------------------------------------------------ HGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA ------------------------------------------------------------ LKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDN ------------------------------------------------------------ MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE ------------------------------------------------------------ QEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLV --------------------------------1-------1---- >Cytochrome c; SWP:P00004; PDB:1WEJH; EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEKGLEWIGRIDPASGNTKY ---------------------1-------------------------------------- DPKFQDKATITADTSSNTAYLQLSSLTSEDTAVYYCAGYDYGNFDYWGQGTTLTVSSAET -----------------------------------1------------------------ TPPSVYPLAPGTAALKSSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYT -----------------------2------------------------------------ LTSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPRNCGGDC ------------------2------------------------ >Pterin-mimicking anti-idi; SWP:Q920E6; PDB:1WEJL; DIQMTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYNAKTLADGVPS ----------------------1------------------------------------- RFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPWTFGGGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >PROBABLE RNA 2'-PHOSPHOTR; SWP:Q9YFP5; PDB:1WFXA; VRLSKTLAGILRHHPGRYGVRLTREGWARVSEVVEGLRKAGWSWVEEWHIVGVALHDPKG ------------------------------------------------------------ RYELRNGEIRARYGHSIPVNVEPLPGEPPPILYHGTTEEALPLIERGIRGRRLKVHLTSS ------------------------------------------------------------ LEDAVSTGRRHGNLVAVLLVDVECLRRRGLKVERSKTVYTVDWVPPECIAEVRRESL -----------------------1-----------------------1--------- >KIAA1579 PROTEIN; SWP:Q9HCJ3; PDB:1WG1A; GSSGSSGILVKNLPQDSNCQEVHDLLKDYDLKYCYVDRNKRTAFVTLLNGEQAQNAIQMF ------------------1--------------1-------------------------- HQYSFRGKDLIVQLQPTDALLCSGPSSG ---------------------------- >HYPOTHETICAL PROTEIN YK10; SWP:Q19853; PDB:1WK1A; GSSGSSGVKFLTVNDDILSMPQARNFCASAGGYLADDLGDDKNNFYSSIAANTQFWIGLF --------------------------1--------------------------------- KNSDGQFYWDRGQGINPDLLNQPITYWANGEPSNDPTRQCVYFDGRSGDKSKVWTTDTCA ---------------------------------------2------------------2- TPRPFICQKHRYDSDHKPNTIGDASGPSSG ------1----------------------- >YEAST KILLER TOXIN; SWP:P10410; PDB:1WKT; GDGYLIMCKNCDPNTGSCDWKQNWNTCVGIGANVHWMVTGGSTDGKQGCATIWEGSGCVG -------1--2------1--------3---------------------4--------3-- RSTTMCCPANTCCNINTGFYIRSYRRVE -----45----25--------------- >CYSTEINE SYNTHASE; SWP:Q9YBL2; PDB:1WKVA; ALADISGYLDVLDSVRGFSYLENAREVLRSGEARCLGNPRSEPEYVKALYVIGASRIPVG ----------------------------------1------------------------- DGCSHTLEELGVFDISVPGEMVFPSPLDFFERGKPTPLVRSRLQLPNGVRVWLKLEWYNP --1--------------------------------------------------------- FSLSVKDRPAVEIISRLSRRVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEE ------------------------------------------------------------ FGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRGTARE ------------------------------------------------------------ IFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGIRRVET ------------------------------------------------------------ GMLWINMLDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPG ------------------------------------------------------------ DYVVVVPDTGFKYLSLVQNALE ---------------------- >ARABINANASE-TS; SWP:Q93HT9; PDB:1WL7A; VHFHPFGNVNFYEMDWSLKGDLWAHDPVIAKEGSRWYVFHTGSGIQIKTSEDGVHWENMG ------------------------------------------------------------ RVFPSLPDWCKQYVPEKDEDHLWAPDICFYNGIYYLYYSVSTFGKNTSVIGLATNRTLDP ------------------------------------------------------------ RDPDYEWKDMGPVIHSTASDNYNAIDPNVVFDQEGQPWLSFGSFWSGIQLIQLDTETMKP ------------------------------------------------------------ AAQAELLTIASRGEEPNAIEAPFIVCRNGYYYLFVSFDFCCRGIESTYKIAVGRSKDITG ---------------------------------------11------------------- PYVDKNGVSMMQGGGTILDAGNDRWIGPGHCAVYFSGVSAILVNHAYDALKNGEPTLQIR ------------------------------------------------------------ PLYWDDEGWPYL ------------ >176aa long hypothetical d; SWP:Q96Z62; PDB:1WLTA; MPFEFENLGMGIILIKPKVFPDKRGFFLEVFKSEDFTKMRIPNVIQTNMSFSRKGVVRGL ------------------------------------------------------------ HYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGF ------------------------------------------------------------ QALEDSIVIYFITHNEYSPPHERCISYSYIDWPIKEVIISDKDLQCPSLEKAEVFD -----------------------1---------------------1---------- >NEUROTOXIN BMP01; SWP:Q9U8D2; PDB:1WM7A; ATCEDCPEHCATQNARAKCDNDKCVCEPK --1--2---3--------1----2-3--- >ISTX; SWP:P0C194; PDB:1WMTA; VHTNIPCRGTSDCYEPCEKKYNCARAKCMNRHCNCYNNCPW ------1-----2---3-----4----1----2-3---4-- >lectin CEL-I, N-acetyl-D-; SWP:Q7M462; PDB:1WMZA; NQCPTDWEAEGDHCYRFFNTLTTWENAHHECVSYSCSTLNVRSDLVSVHSAAEQAYVFNY --1----------1----------------2----------------------------- WRGIDSQAGQLWIGLYDKYNEGDFIWTDGSKVGYTKWAGGQPDNWNNAEDYGQFRHTEGG ------------------------------------------------------------ AWNDNSAAAQAKYMCKLTFE --------------2----- >FAMILY B DNA POLYMERASE; SWP:Q9HH84; PDB:1WN7A; MILDTDYITEDGKPVIRIFKKENGEFKIEYDRTFEPYFYALLKDDSAIEEVKKITAERHG ------------------------------------------------------------ TVVTVKRVEKVQKKFLGRPVEVWKLYFTHPQDVPAIRDKIREHPAVIDIYEYDIPFAKRY ------------------------------------------------------------ LIDKGLVPMEGDEELKMLAFDIETLYEEGEEFAEGPILMISYADEEGARVITWKNVDLPY ------------------------------------------------------------ VDVVSTEREMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGINFALGRDGSEPK ------------------------------------------------------------ IQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGQPKEKVYAEEITTAWE ------------------------------------------------------------ TGENLERVARYSMEDAKVTYELGKEFLPMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRK ------------------------------------------------------------ AYERNELAPNKPDEKELARRRQSYEGGYVKEPERGLWENIVYLDFRSLYPSIIITHNVSP ------------------------------------------------------------ DTLNREGCKEYDVAPQVGHRFCKDFPGFIPSLLGDLLEERQKIKKKMKATIDPIERKLLD -------1-------------1-------------------------------------- YRQRAIKILANSYYGYYGYARARWYCKECAESVTAWGREYITMTIKEIEEKYGFKVIYSD -------------------------2--2------------------------------- TDGFFATIPGADAETVKKKAMEFLKYINAKLPGALELEYEGFYERGFFVTKKKYAVIDEE ------------------------------------------------------------ GKITTRGLEIVRRDWSEIAKETQARVLEALLKDGDVEKAVRIVKEVTEKLSKYEVPPEKL ------------------------------------------------------------ VIHEQIPHVAVAKRLAATVISYIVLRAIPFDEFDPTKHKYDAEYYIENQVLPAVERILRA ------------------------------------------------------------ FGYRKEDLR --------- >TRIMERELYSIN II; SWP:P20165; PDB:1WNIA; FPQRYIELAIVVDHGMYKKYNQNSDKIKVRVHQMVNHINEMYRPLNIAISLNRLQIWSKK ------------------------------------------------------------ DLITVKSASNVTLESFGNWRETVLLKQQNNDCAHLLTATNLNDNTIGLAYKKGMCNPKLS ------------------------------------------------------1----- VGLVQDYSPNVFMVAVTMTHELGHNLGMEHDDKDKCKCEACIMSDVISDKPSKLFSDCSK -----------------------------------2-3--3----------------2-- NDYQTFLTKYNPQCILNA -------------1---- >TRYPSIN INHIBITOR; SWP:Q8WQ22; PDB:1WO9A; AGECTPGQTKKQDCNTCTCTPTGIWGCTRKACRTT ---1---------2--3-1-------3----2--- >122AA LONG CONSERVED HYPO; SWP:Q974G3; PDB:1WOLA; MKRVEDWIKQAERDLEEARYAKSGGYYELACFLSQQCAEKAVKGLLQFQGIEKRGHSISH ------------------------------1----------------------------- LLTNPPADILQCATFLDKQYTPSRYPDVYYEGAPYEYYTERDADECINCAIRILNWVKGQ -----------2---------------------------------1--2----------- IK -- >THIOREDOXIN -RELATED PROT; SWP:Q9BRA2; PDB:1WOUA; YEEVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG ---------------------------------------1--1----------------- CVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGTPQKLVESECLQANLVEMLFSE ----------------------------------------------------------- >Sarcoplasmic/endoplasmic ; SWP:P04191; PDB:1WPGA; MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDL ------------------------------------------------------------ LVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALK ------------------------------------------------------------ EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL ------------------------------------------------------------ TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMA ------------------------------------------------------------ ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAV ------------------------------------------------------------ ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ ------------------------------------------------------------ MSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALC ------------------------------------------------------------ NDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMK ------------------------------------------------------------ KEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGP ------------------------------------------------------------ VKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGML ------------------------------------------------------------ DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDD ------------------------------------------------------------ LPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM ------------------------------------------------------------ GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAA ------------------------------------------------------------ LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAI ------------------------------------------------------------ GGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMA -----------------------------------1-----------1------------ LSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLK ------------------------------------------------------------ ALDLTQWLMVLKISLPVIGLDEILKFIARNYLEG ---------------------------------- >3-ISOPROPYLMALATE DEHYDRO; SWP:P50455; PDB:1WPWA; GFTVALIQGDGIGPEIVSKSKRILAKINELYSLPIEYIEVEAGDRALARYGEALPKDSLK ------------------------------------------------------------ IIDKADIILKGPVGESAADVVVKLRQIYDMYANIRPAKSIPGIDTKYGNVDILIVRENTE ------------------------------------------------------------ DLYKGFEHIVSDGVAVGMKIITRFASERIAKVGLNFALRRRKKVTCVHKANVMRITDGLF ---------------------------------------------1-------------- AEACRSVLKGKVEYSEMYVDAAAANLVRNPQMFDVIVTENVYGDILSDEASQIAGSLGIA ---1-------------------------------------------------------- PSANIGDKKALFEPVHGAAFDIAGKNIGNPTAFLLSVSMMYERMYELSNDDRYIKASRAL ------------------------------------------------------------ ENAIYLVYKERKALTPDVGGNATTDDLINEIYNKLG ------------------------------------ >VASCULAR ENDOTHELIAL GROW; SWP:P67863; PDB:1WQ8A; VRPFLEVHERSACQARETLVPILQEYPDEISDIFRPSCVAVLRCSGCCTDESLKCTPVGK ------------1------------------------------2---3------1----- HTVDIQIMRVNPRTQSSKMEVMKFTEHTACECRPRRKQG -----------------------------2-3------- >VASCULAR ENDOTHELIAL GROW; SWP:P67861; PDB:1WQ9A; EVRPFLDVYQRSACQTRETLVSILQEHPDEISDIFRPSCVAVLRCSGCCTDESMKCTPVG -------------1------------------------------2---3------1---- KHTADIQIMRMNPRTHSSKMEVMKFMEHTACECRPA ------------------------------2-3--- >APTOTOXIN VII; SWP:P49271; PDB:1WQBA; WLGCARVKEACGPWEWPCCSGLKCDGSECHPQ ---1------2------31----2----3--- >Insulin-like growth facto; SWP:P22692; PDB:1WQJB; AIHCPPCSEEKLARCRPPVGCEELVREPGCGCCATCALGLGMPCGVYTPRCGSGLRCYPP ---1--2-------3-----4--------1-23--4-------5------6-----5--- RGVEKPLHTLMHGQGVCMEL ----------------6--- >Insulin-like growth facto; SWP:P05019; PDB:1WQJI; PETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYC ----1-----------2----------------------------31---3--------2 AP -- >TOXIN APETX1; SWP:P61541; PDB:1WQKA; GTTCYCGKTIGIYWFGTKTCPSNRGYTGSCGYFLGICCYPVD ---1-2-------------3---------2------13---- >ETHYLBENZENE DIOXYGENASE ; SWP:Q51743; PDB:1WQLA; NWSDEEIKALVDEEKGLLDPRIFSDQDLYEIELERVFARSWLLLGHEGHIPKAGDYLTTY ------------------------------------------------------------ MGEDPVIVVRQKDRSIKVFLNQCRHRGMRIERSDFGNAKSFTCTYHGWAYDTAGNLVNVP ------------------------------------------------------------ YEKEAFCDCGFDKADWGPLQARVDTYKGLIFANWDTEAPDLKTYLSDATPYMDVMLDRTE ------1-1--------------------------------------------------- AVTQVITGMQKTVIPCNWKFAAEQFCSDMYHAGTMAHLSGVLSSLPPEMDLSQVKLPSSG ------------------------------------------------------------ NQFRAKWGGHGTGWFNDDFALLQAIMGPKVVDYWTKGPAAERAKERLGKVLPADRMVAQH ------------------------------------------------------------ MTIFPTCSFLPGINTVRTWHPRGPNEIEVWSFIVVDADAPEDIKEEYRRKNIFTFNQGGT ------------------------------------------------------------ YEQDDGENWVEVQRGLRGYKARSRPLCAQMGAGVPNKNNPEFPGKTSYVYSEEAARGFYH ------------------------------------------------------------ HWSRMMSEPSWDTLKS ---------------- >Methylated-DNA--protein-c; SWP:Q973C7; PDB:1WRJA; MIVYGLYKSPFGPITVAKNEKGFVMLDFCDCAERSSLDNDYFTDFFYKLDLYFEGKKVDL ----------------------------1-1----------------------------- TEPVDFKPFNEFRIRVFKEVMRIKWGEVRTYKQVADAVKTSPRAVGTALSKNNVLLIIPC ------------------------------------------------------------ HRVIGEKSLGGYSRGVELKRKLLELEGIDV ------------------------------ >MAVICYANIN; SWP:P80728; PDB:1WS8A; MATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNS ---------------------------------------------------------1-- SSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDP -------------------------------1------------ >HYPOTHETICAL PROTEIN ST02; SWP:Q976G0; PDB:1WSCA; QEQLVAVNELNENLGKVLIKIARDSIANKLGILKINLEDYLSSLNDPILNKKGLAFVTLE ------------------------------------------------------------ TYYGNSTSLRGCIGYVEAVAPLKEIVSKAAIAAAFSDPRFPPLSKGEFDNIIIEVTVLTK ------------------------------------------------------------ PQEIDVENRWELPKKIKVGEDGLIVEYGILYSGLLLPQVPEYCWDEETFLAETCIKAGLE ------------------------------------------1----------2------ PDCWLNNKVKIKKFQGIIFREEKPKSEKILIIKPSEVKCKKEEI --2-----------------------------------1----- >ANTI EGFR ANTIBODY FV REG; SWP:NA; PDB:1WT5A; QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYWMHWVRQAPGQGLEWMGNIYPGSGGTNY ---------------------1-------------------------------------- AEKFKNRVTMTRDTSISTAYMELSRLRSDDTAVYYCARSGGPYFFDYWGQGTLVT -----------------------------------1------------------- >ANTI EGFR ANTIBODY FV REG; SWP:NA; PDB:1WT5C; DIVMTQSPLSLPVTPGEPASISCRSSQNIVHNNGITYLEWYLQKPGQSPQLLIYKVSDRF ----------------------1------------------------------------- SGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQGSHIPPTFGQGTKVEI --------------------------------1------------------ >BUTX-MTX; SWP:P59936; PDB:1WT7A; WCSTCLDLACTGSKDCYAPCRKQTGCPNAKCINKSCKCYGC -1--1----2-----3---4-----5----2----3-4--5 >AGKISACUTACIN A CHAIN; SWP:Q9DEF9; PDB:1WT9A; DCSSGWSSYEGHCYKVFKQSKTWTDAESFCTKQVNGGHLVSIESSGEADFVGQLIAQKIK -1----------1----------------2------------------------------ SAKIHVWIGLRAQNKEKQCSIEWSDGSSISYENWIEEESKKCLGVHIETGFHKWENFYCE -----------------------------------------3----------------3- QQDPFVCEA ------2-- >Anticoagulant protein-B [; SWP:Q9DEF8; PDB:1WT9B; DCPSDWSSYEGHCYKPFNEPKNWADAENFCTQQHTGSHLVSFQSTEEADFVVKLAFQTFD -1----------1----------------2------------------------------ YGIFWMGLSKIWNQCNWQWSNAAMLKYTDWAEESYCVYFKSTNNKWRSITCRMIANFVCE -----------------------------------3--------------3-------2- FQA --- >5'-METHYLTHIOADENOSINE PH; SWP:Q9YAQ8; PDB:1WTAA; EITRPPGVRAHVGVIGGSGLYDPGIVENPVEVKVSTPYGNPSDFIVVGDVAGVKVAFLPR ------------------------------------------------------------ HGRGHRIPPHAINYRANIWALKALGVKWVISVSAVGSLREDYRPGDFVVPDQFIDMTKNR ------------------------------------------------------------ RHYTFYDGPVTVHVSMADPFCEDLRQRLIDSGRRLGYTVHERGTYVCIEGPRFSTRAESR --------------------1--------------------------------------- VWKDVFKADIIGMTLVPEINLACEAQLCYATLAMVTDYDVWADRPVTAEEVERVMISNVE ----------------------2----1-------------------------------- RARRMLYDVIPKLAGEPELERCSCCRALDTAAI ---------------------3-23-------- >BENCE-JONES PROTEIN MCG (; SWP:P80362; PDB:1WTLA; DIQMTQSPSSLSASVGDRVTITCRASQDITNYVNWFQQRPGQAPKVLIYGASILETGVPS ----------------------1------------------------------------- RFSGSGSGTDFTFTISSLQPEDIATYYCQQYDTLPLTFGGGTKVDIKR ---------------------------1-------------------- >BOUGANIN; SWP:Q8W4U4; PDB:1WUCA; YNTVSFNLGEAYEYPTFIQDLRNELAKGTPVCQLPVTLQTIADDKRFVLVDITTTSKKTV -------------------------------1---------------------------- KVAIDVTDVYVVGYQDKWDGKDRAVFLDKVPTVATSKLFPGVTNRVTLTFDGSYQKLVNA ------------------------------------------------------------ AKVDRKDLELGVYKLEFSIEAIHGKTINGQEIAKFFLIVIQMVSEAARFKYIETEVVDRG ------------------------------------------------------------ LYGSFKPNFKVLNLENNWGDISDAIHKSSPQCTTINPALQLISPSNDPWVVNKVSQISPD -------------------------------1---------------------------- MGILKFKS -------- >BETA-HORDOTHIONIN; SWP:P21742; PDB:1WUWA; KSCCRSTLGRNCYNLCRVRGAQKLCANACRCKLTSGLKCPSSFPK --12-------3---4--------4---3-2-------1------ >PCDHA4 PROTEIN; SWP:O88689; PDB:1WUZA; GNSQIHYSIPEEAKHGTFVGRIAQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFV ------------------------------------------------------------ NSRIDREELCGRSAECSIHLEVIVDRPLQVFHVEVEVRDINDN ---------1-----1--------------------------- >TRIFLIN; SWP:Q8JI39; PDB:1WVRA; NVDFDSESPRKPEIQNEIIDLHNSLRRSVNPTASNMLKMEWYPEAAANAERWAYRCIESH -------------------------------------------------------1---- SSRDSRVIGGIKCGENIYMATYPAKWTDIIHAWHGEYKDFKYGVGAVPSDAVIGHYTQIV ------------2----------------------------------------------- WYKSYRAGCAAAYCPSSKYSYFYVCQYCPAGNIIGKTATPYKSGPPCGDCPSDCDNGLCT --------3----1----------3--2------------------4--5---4----5- NPCTRENEFTNCDSLVQKSSCQDNYMKSKCPASCFCQNKII --6--------7--------8--------7---8-6----- >CHITINASE C; SWP:O50152; PDB:1WVVA; GGNNGFVVSEAQFNQMFPNRNAFYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANVS ------------------------------------------------------------ HQTGGLFYIKEVNEANYPHYCDTTQSYGCPAGQAAYYGRGPIQLSWNFNYKAAGDALGIN --------------------1-------1------------------------------- LLANPYLVEQDPAVAWKTGLWYWNSQNGPGTMTPHNAIVNNAGFGETIRSINGALECNGG --------------------------------------------------------2--- NPAQVQSRINKFTQFTQILGTTTGPNLSC ----------------------------2 >BDNF/NT-3 growth factors ; SWP:Q16620; PDB:1WWBX; VHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEY -------------------1---------------------------------------- HGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGID --1---------------------------------------- >NT-3 GROWTH FACTOR RECEPT; SWP:Q16288; PDB:1WWCA; TVYYPPRVVSLEEPELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEIS --------------------1--------------------------------------- EGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFPVDE --1------------------------------------------ >EXCITATORY INSECT SELECTI; SWP:O61668; PDB:1WWNA; KKNGYAVDSSGKVSECLLNNYCNNICTKVYYATSGYCCLLSCYCFGLDDDKAVLKIKDAT ---------------1-----2---3----------14---2-3---------------- KSYCDVQII ---4----- >Beta-nerve growth factor ; SWP:P01138; PDB:1WWWV; SSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGEVNINNSVFKQYFFETKCRDG -------------1------------------------------------------2--- CRGIDSKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRK 3-----------1---------------------------2-3----- >TOXIN APETX2; SWP:P61542; PDB:1WXNA; GTACSCGNSKGIYWFYRPSCPTDRGYTGSCRYFLGTCCTPAD ---1-2-------------3---------2------13---- >HYPOTHETICAL PROTEIN ST16; SWP:Q970G9; PDB:1WY6A; EIIRKLMDAKKFLLDGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCRYMFQVLDKI -----------------------------------------1-------2---------- GSYFDLDKCQNLKSVVECGVINNTLNEHVNKALDILVIQGKRDKLEEIGREILNEVSASI --------1--------2------------------------------------------ LVAIANALRRVGDERDATTLLIEACKKGEKEACNAVNTL ------------------------3-------3------ >PROTOCADHERIN BETA 14; SWP:Q6PB90; PDB:1WYJA; GSSGSSGAGSATITYSVLEETDRGSLVGNLAKDLGLSLRELITRGAQILSKGNKQLLQLE ------------------------------------------------------------ QKSGNLLLKEKLDREELCGSTNPCILHFQVLLKSPVQFIQGEIQLQDVNDHAPEFMEDES -----------------1-----1------------------------------------ GPSSG ----- >POTASSIUM CHANNEL BLOCKIN; SWP:Q10726; PDB:1WZ5A; LVKCRGTSDCGRPCQQQTGPNSKCINRMCKCYG ---1-----2---3---------1----2-3-- >COAT PROTEIN; SWP:Q9EB06; PDB:1X36A; RGGITVLTHSELSAEIGVTDSIVVSSELVMPYTVGTWLRGVAANWSKYSWLSVRYTYIPS ------------------------------------------------------------ CPSSTAGSIHMGFQYDMADTVPVSVNQLSNLRGYVSGQVWSGSAGLCFINGTRCSDTSTA ----------------------------------------------1------1------ ISTTLDVSKLGKKWYPYKTSADYATAVGVDVNIATPLVPARLVIALLDGSSSTAVAAGRI ------------------------------------------------------------ YCTYTIQMIEPTASALNN ------------------ >BETA-D-GLUCAN EXOHYDROLAS; SWP:Q9XEI3; PDB:1X38A; DYVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSV ------------------------------------------------------------ PRKGATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRD ------------------------------------------------------------ PYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPGL ------------------------------1-------1--------------------- QGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKN ------------------------------------------------------------ AMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDY ------------------------------------------------------------ SYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE ------------------------------------------------------------ NPYADPAMAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKKAPKILVAGSHA ------------------------------------------------------------ DNLGYQCGGWTIEWQGDTGRTTVGTTILEAVKAAVDPSTVVVFAENPDAEFVKSGGFSYA ------------------------------------------------------------ IVAVGEHPYTETKGDNLNLTIPEPGLSTVQAVCGGVRCATVLISGRPVVVQPLLAASDAL --------------------------------2----2---------------------- VAAWLPGSEGQGVTDALFGDFGFTGRLPRTWFKSVDQLPMNVGDAHYDPLFRLGYGLTTN ------------------------------------------------------------ AT -- >HEMOGLOBIN COMPONENT V; SWP:Q7M422; PDB:1X3KA; AFVGLSDSEEKLVRDAWAPIHGDLQGTANTVFYNYLKKYPSNQDKFETLKGHPLDEVKDT ------------------------------------------------------------ ANFKLIAGRIFTIFDNCVKNVGNDKGFQKVIADMSGPHVARPITHGSYNDLRGVIYDSMH ------------------------------------------------------------ LDSTHGAAWNKMMDNFFYVFYECLDGRCSQFS ----------------------1----1---- >CYTOCHROME B5; SWP:Q17091; PDB:1X3XA; CGDKKYTKEEVAKHNTQNDLWIIYDGEVHDMTSFYKEHPGGKVILNKAGQDATSVLKTLA 1----------------------------------------------------------- PHVKAADVVMKKLKQTCIGKVK ----------------1----- >HYPOTHETICAL PROTEIN PH04; SWP:O58216; PDB:1X42A; IRAVFFDFVGTLLSVEGEAKTHLKIEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYR ------------------------------------------------------------ PIRDIEEEVRKLAEKYGFKYPENFWEIHLRHQRYGELYPEVVEVLKSLKGKYHVGITDSD ------------------------------------------------------------ TEYLAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDC -----------------------------------------------------------1 GGSKNLGTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDELN ------------------------1------------------ >PCFK1; SWP:P83591; PDB:1X5VA; ACGILHDNCVYVPAQNPCCRGLQCRYGKCLVQV -1------2--------31----2----3---- >FIMBRIAL PROTEIN; SWP:P02973; PDB:1X6ZA; GTEFARSEGASALASVNPLKTTVEEALSRGWSVKSGTGTEDATKKEVPLGVAADANKLGT ------------------------------------------------------------ IALKPDPADGTADITLTFTMGGAGPKNKGKIITLTRTAADGLWKCTSDQDEQFIPKGCSR --------------------------------------------1------------1-- >BETA-2-MICROGLOBULIN; SWP:Q9TQP6; PDB:1X7QA; GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYW ------------------------------------------------------------ DQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDG ----------------------------------------1------------------- KDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQ -------------------------------------------1---------------- RTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGT ----------------------2------------------------------------- FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE ------------------2---------------- >NEUTROPHIL GELATINASE-ASS; SWP:P80188; PDB:1X89A; TSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGNAILREDKDPQKMYATIYELKEDKS ------------------------------------------------------------ YNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLGNIKSYPGLTSYLVRVVSTNYNQHAMVFF ------------1----------------------------------------------- KKVSQNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCID ---------------------------------------------------1-- >NITROPHORIN 4; SWP:Q94734; PDB:1X8QA; ACTKNAIAQTGFNKDKYFNGDVWYVTDYLDLEPDDVPKRYCAALAAGTASGKLKEALYHY -1--------------------------------------2------------------- DPKTQDTFYDVSELQVESLGKYTANFKKVDKNGNVKVAVTAGNYYTFTVMYADDSSALIH ------------------------------------------------------------ TCLHKGNKDLGDLYAVLNRNKDAAAGDKVKSAVSAATLEFSKFISTKENNCAYDNDSLKS -1------------------------------------------------2--------- LLTK ---- >invertase/pectin methyles; SWP:Q9LNF2; PDB:1X91A; SSEMSTICDKTLNPSFCLKFLNTKFASANLQALAKTTLDSTQARATQTLKKLQSIIDGGV -------1--------1------------------------------------------- DPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRLRS ----------2---------------------------------------2--------- VDSSVVNNSKTIKNLCGIALVISNMLPRN ----------------------------- >Endoplasmic reticulum man; SWP:Q9UKM7; PDB:1X9DA; HLNYRQKGVIDVFLHAWKGYRKFAWGHDELKPVSRSFSEWFGLGLTLIDALDTMWILGLR ------------------------------------------------------------ KEFEEARKWVSKKLHFEKDVDVNLFESTIRILGGLLSAYHLSGDSLFLRKAEDFGNRLMP ------------------------------------------------------------ AFRTPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDKKFQEAVEKV ------------------------------------------------------------ TQHIHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQETQLL ------------------------------------------------------------ EDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFSAKMDHLVCFLPGTLALGVYHGLPAS ------------------------------------------1----------------- HMELAQELMETCYQMNRQMETGLSPEIVHFNLYPQPGRRDVEVKPADRHNLLRPETVESL -----------1------------------------------------------------ FYLYRVTGDRKYQDWGWEILQSFSRFTRVPSGGYSSINNVQDPQKPEPRDKMESFFLGET ------------------------------------------------------------ LKYLFLLFSDDNLLSLDAYVFNTEAHPLPIWT -------------------------------- >GLOBIN IV, EXTRACELLULAR; SWP:P13579; PDB:1X9FA; DCCSYEDRREIRHIWDDVWSSSFTDRRVAIVRAVFDDLFKHYPTSKALFERVKIDEPESG --1--------------------------------------------------------- EFKSHLVRVANGLKLLINLLDDTLVLQSHLGHLADQHIQRKGVTKEYFRGIGEAFARVLP ------------------------------------------------------------ QVLSCFNVDAWNRCFHRLVARIAKDLP -------------1------------- >Extracellular globin-2; SWP:P02218; PDB:1X9FB; KKQCGVLEGLKVKSEWGRAYGSGHDREAFSQAIWRATFAQVPESRSLFKRVHGDDTSHPA ---1-------------------------------------------------------- FIAHADRVLGGLDIAISTLDQPATLKEELDHLQVQHEGRKIPDNYFDAFKTAILHVVAAQ ------------------------------------------------------------ LGRCYDREAWDACIDHIEDGIKGHH ------------1------------ >Extracellular globin-3 [P; SWP:P11069; PDB:1X9FC; HEHCCSEEDHRIVQKQWDILWRDTESSKIKIGFGRLLLTKLAKDIPEVNDLFKRVDIEHA ----1------------------------------------------------------- EGPKFSAHALRILNGLDLAINLLDDPPALDAALDHLAHQHEVREGVQKAHFKKFGEILAT ------------------------------------------------------------ GLPQVLDDYDALAWKSCLKGILTKISSRL ----------------1------------ >Hemoglobin chain d1 [Prec; SWP:O61233; PDB:1X9FD; ECLVTESLKVKLQWASAFGHAHERVAFGLELWRDIIDDHPEIKAPFSRVRGDNIYSPEFG -1---------------------------------------------------------- AHSQRVLSGLDITISMLDTPDMLAAQLAHLKVQHVERNLKPEFFDIFLKHLLHVLGDRLG ------------------------------------------------------------ THFDFGAWHDCVDQIIDGIK ----------1--------- >4m5.3 anti-fluorescein si; SWP:NA; PDB:1X9QA; SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNR -----------------------1------------------------------------ VSGVPDRFSGSGSGTDFTLKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEKDGGVKLDE ---------------------------------1-------------------------- TGGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSV ---------------2-------------------------------------------- KGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASYGMEYLGQGTSVTVS -------------------------------2------------------- >UMECYANIN; SWP:P42849; PDB:1X9UA; MEDYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKK ---------------------------------------------------------1-- ENPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGA -------------------------------1------------- >SARS ORF7A ACCESSORY PROT; SWP:P59635; PDB:1XAKA; ELYHYQECVRGTTVILKEPCPSGTYEGNSPFHPLADNKFALTCTSTHFAFACADGTRHTY -------1-----------2----------------------1--------2-------- QLRARSV ------- >B- AND T-LYMPHOCYTE ATTEN; SWP:Q7TSA3; PDB:1XAUA; CEVQLNIKRNSKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWE 1-----------------------2----1------------------------------ ENRSVPVFVLHFKPIHLSDNGSYSCSTNFNSQVINSHSVTIHVR ------------------------2------------------- >AZURIN; SWP:P00282; PDB:1XB3A; AECSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVV --1----------------------1---------------------------------- TCGMASGLDKDYLCPDDSRVIAHTKLIGSGEKDSVTFDVSKLKGGEQYMFFCTFPGHSAL -2-----------2---------------------------------------------- MKGTLTLK -------- >ANTIFUNGAL PROTEIN GAFP-1; SWP:Q9AXZ2; PDB:1XD5A; SDRLNSGHQLDTGGSLAEGGYLFIIQNDCNLVLYDNNRAVWASGTNGKASGCVLKMQNDG ----------------------------1----------------------1-------- NLVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHTNVGN ---------------------------------------------------- >GASTRODIANIN-4; SWP:Q1M0Y9; PDB:1XD6A; SDRLNAGKSLGAGGSLAEGPYLFIMQNDCNLVLYDNNRAVWASGTNGKASNCILKMQRDG ----------------------------1----------------------1-------- NLVIYSGSRAMWASNTNRQDGNYYLILQRDRNVVIYDNSNNAIWASGTNV -------------------------------------------------- >Heparin-binding EGF-like ; SWP:Q99075; PDB:1XDTR; PCLRKYKDFCIHGECKYVKELRAPSCICHPGYHGERCHGLS -1-------2----1----------2-3--------3---- >POLYMERIC-IMMUNOGLOBULIN ; SWP:P01833; PDB:1XEDA; SPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQCITLISSEGYVSSKYAGRANL --------------------1---------------2--2-------------------- TNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVLEHHHHHH -------------------------1------------------------- >HEMOLYSIN; SWP:A2P8X3; PDB:1XEZA; AIKYYNAADWQALPSLAELRDLVINQQKRVLVDFSQISDAEGQAEMQAQFRKAYGVGFAN ------------------------------------------------------------ QFIVITEHKGELLFTPFDRTEETNTLPHVAFYISVNRAISDEECTFNNSWLWKNEKGSRP -------------------------------------------1---------------- FCKDANISLIYRVNLERSLQYGIVGSATPDAKIVRISLDDDSTGAGIHLNDQLGYRQFGA -1---------------------------------------------------------- SYTTLDAYFREWSTDAIAQDYRFVFNASNNKAQILKTFPVDNINEKFERKEVSGFELGVT ------------------------------------------------------------ GGVEVSGDGPKAKLEARASYTQSRWLTYNTQDYRIERNAKNAQAVSFTWNRQQYATAESL ------------------------------------------------------------ LNRSTDALWVNTYPVDVNRISPLSYASFVPKMDVIYKASATETGSTDFIIDSSVNIRPIY ------------------------------------------------------------ NGAYKHYYVVGAHQSYHGFEDTPRRRITKSASFTVDWDHPVFTGGRPVNLQLASFNNRCI ----------------------------------------------------------2- QVDAQGRLTANMCDSQQSAQSFIYDQLGRYVSASNTKLCLDGAALDALQPCNQNLTQRWE ------------2-------------------------3-----------3--------- WRKGTDELTNVYSGESLGHDKQTGELGLYASSNDAVSLRTITAYTDVFNAQESSPILGYT ------------------------------------------------------------ QGKMNQQRVGQDNRLYVRAGAAIDALGSASDLLVGGNGGSLSSVDLSGVKSITATSGDFQ ------------------------------------------------------------ YGGQQLVALTFTYQDGRQQTVGSKAYVTNAHEDRFDLPDAAKITQLKIWADDWLVKGVQF ------------------------------------------------------------ DLN --- >DIPEPTIDYL AMINOPEPTIDASE; SWP:P42658; PDB:1XFDA; QKKKVTVEDLFSEDFKIHDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIES ------------------------------------------------------------ LRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAG ------------------------------------------------------------ WGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWW ------------------------------------------------------------ SPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH ------------------------------------------------------------ DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDES --------------------------------------------1------1-------- EAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWD ------------------------------------------------------------ VTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHS ----------------------------------------2--2-----3---------- MDFFLLKCEGPGVPMVTVHNTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEIDDYNL -------3---------------------------------------------------- PMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSG ------------------------------------------------------------ FQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKG ------------------------------------------------------------ ENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLI --------4--------------------------------------------------- IHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVEC -----------------------------------------------------------4 FRI --- >LOW-DENSITY LIPOPROTEIN R; SWP:P01130; PDB:1XFEA; GNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCN -----1-------2----1------3-----2----------3----4------5---4- DLKIGYECLCPDGFQLVAQRRCE -------5-6-----------6- >THIOREDOXIN H1; SWP:P29448; PDB:1XFLA; MASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNV ---------------------------------------1--1----------------- LFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA ------------------------------------------------------ >HEAVY CHAIN ANTIBODY; SWP:P00698; PDB:1XFPA; VQLQASGGGSVQAGGSLRLSCAASGYTIGPYCMGWFRQAPGKEREGVAAINSGGGSTYYA --------------------1----------2---------------------------- DSVKGRFTISQDNAKNTVYLLMNSLEPEDTAIYYCAADSTIYASYYECGHGLSTGGYGYD ----------------------------------1------------2------------ SWGQGTQVTVS ----------- >Pectinesterase inhibitor; SWP:P83326; PDB:1XG2B; FENHLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQFSIDIAQASAKQTSKIIASLT ---------1--------1----------------------------------------- NQATDPKLKGRYETCSENYADAIDSLGQAKQFLTSGDYNSLNIYASAAFDGAGTCEDSFE --------------2---------------------------------------2----- GPPNIPTQLHQADLKLEDLCDIVLVISNLLP ------------------------------- >BETA-2-MICROGLOBULIN; SWP:P30474; PDB:1XH3A; GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYW ------------------------------------------------------------ DRNTQIFKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSAYDG ----------------------------------------1------------------- KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQ -------------------------------------------1---------------- RADPPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRT ----------------------2------------------------------------- FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP ------------------2----------------- >POLYPEPTIDE N-ACETYLGALAC; SWP:O08912; PDB:1XHBA; NRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLV -----------1------------------------------------------------ DDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCEC ------------------------------------------------------------ TAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQRE ------------------------------------------------------------ MDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTL -------------------------------------------------------2---- EIVTCSHVGHVFGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRLGLRRKL ----1------------------------------------------------------- QCKPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQCLDNMARKENEKVGIFNCHGMGGNQ -2---------------------------------3----------------3------- VFSYTANKEIRTDDLCLDVSKLNGPVTMLKCHHLKGNQLWEYDPVKLTLQHVNSNQCLDK ---------------4--------------4-------------------------5--- ATEEDSQVPSIRDCTGSRSQQWLLRNV -------------5------------- >CELLULAR REPRESSOR OF E1A; SWP:O75629; PDB:1XHNA; GSLPPREDAARVARFVTHVSDWGALATISTLEAVRGRPFADVLSLSDGPPGAGSGVPYFY ------------------------------------------------------------ LSPLQLSVSNLQENPYATLTTLAQTNFCKKHGFDPQSPLCVHILSGTVTKVNETEDIAKH ---------------------------1-----------1-------------------- SLFIRHPEKTWPSSHNWFFAKLNITNIWVLDYFGGPKIVTPEEYYNVT ------------------------------------------------ >CYSTEINE-RICH OMEGA-CONOT; SWP:Q89632; PDB:1XI7A; TCIGHYQKCVNADKPCCSKTVRYGDSKNVRKFICDRDGEGVCVPFDG -1------2------31----------------2-------3----- >T-cell surface glycoprote; SWP:P04234; PDB:1XIWB; MKIPIEELEDRVFVNCNTSITWVEGTVGTLLSDITRLDLGKRILDPRGIYRCNESTVQVH ---------------1-----------------------------------1-------- YRMCQS ------ >T-CELL SURFACE GLYCOPROTE; SWP:NA; PDB:1XIWD; EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWMGLINPYKGVSTY ---------------------1-------------------------------------- NQKFKDKATLTVDKSSSTAYMELLSLTSEDSAVYYCARSGYYGDSDWYFDVWGQGTTLTV -----------------------------------1------------------------ FS -- >LYSOZYME; SWP:Q37875; PDB:1XJTA; GGAICAIAVITIVGNGNVRTNQAGLELIGNAEGCRRDPYCPAGVWTDGIGNTHGVTPGVR ----1----------------------------1-------------------------- KTDQQIAADWEKNILIAERCINQHFRGKDPDNAFSATSAAFNGCNSLRTYYSKARGRVET -------------------2-----------------------2---------------- SIHKWAQKGEWVNCNHLPDFVNSNGVPLRGLKIRREKERQLCLTGLVNEH -------------3---------------------------3-------- >LYSOZYME; SWP:Q37875; PDB:1XJUA; RTNQAGLELIGNAEGCRRDPYMCPAGVWTDGIGNGVTPGVRKTDQQIAADWEKNILIAER ---------------1------1------------------------------------- CINQHFRGKDMPDNAFSAMTSAAFNMGCNSLRTYYSKARGMRVETSIHKWAQKGEWVNMC 2--------------------------2-------------------------------3 NHLPDFVNSNGVPLRGLKIRREKERQLCLTGLVNEH ---------------------------3-------- >HYPOTHETICAL PROTEIN RV26; SWP:Q7TY72; PDB:1XKFA; TTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAA ------------1------------------------1---------------------- GLDPNTATAGELAIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIARHLP ------------------------------------------------------------ >MAJOR MITE FECAL ALLERGEN; SWP:P08176; PDB:1XKGA; SIKTFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQSNGGAINHLSDLSLDEFKNRFLM ------------------------------------------------------------ SAEAFEHLKTQFDNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYL ---------------1--------------------------2----------------- AYRDQSLDLAEQELVDCASQHGCHGDTIPRGIEYIQHNGVVQESYYRYVAREQSCRRPNA ----------------3-----2-------------------------------3----- QRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPN --------1--------------------------------------------------- YHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVILGQTG ---------------------------------------------------------- >DECORIN; SWP:P21793; PDB:1XKUA; GPVCPFRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTL ---1---2-1------2------------------------------------------- ILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVF ------------------------------------------------------------ NGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDG ------------------------------------------------------------ NKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLAD ------------------------------------------------------------ HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVR ----------------------3--------------------------------3---- AAVQL ----- >Chimeric CD3 mouse Epsilo; SWP:P22646; PDB:1XMWA; DDAENIEYKVSISGTSVELTCPLDSDENLKWEKNGQELPQKHDKHLVLQDFSEVEDSGYY --------------------1--------------------------------------- VCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKRALEVLEAE -1---------------------------------------------------------- DKVILKCNSSITLLQGTAGQEVSDNKTLNLGKRIEDPRGMYQCGENAKSFTLQVYYRM ------2-----------------------------------2--------------- >CD209 ANTIGEN-LIKE PROTEI; SWP:Q9H8F0; PDB:1XPHA; AFERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQT -----1--2----------2----------------3----------------------- SRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDN ------------------------------------------------4----------- RCDVDNYWICKKPAACFRD -4-------3-----1--- >8-OXOGUANINE DNA GLYCOSYL; SWP:Q8ZVK6; PDB:1XQOA; AAESQLKRVIETLRRLGIEEVLKLERRDPQYRAVCNVVKRHGETVGSRLAMLNALISYRL ----------------------------------1------------------------- TGKGEEHWEYFGKYFSQLEVIDLCRDFLKYIETSPFLKIGVEARKKRALKACDYVPNLED -----------------------2---------------------------2-------- LGLTLRQLSHIVGARREQKTLVFTIKILNYAYMCSRGVNRVLPFDIPIPVDYRVARLTWC ---------------------------------1-------------------------3 AGLIDFPPEEALRRYEAVQKIWDAVARETGIPPLHLDTLLWLAGRAVLYGENLHGVPKEV ------------------------------------------------------------ IALFQWRGGCRPP ---------3--- >HIT FAMILY HYDROLASE; SWP:Q4CCR3; PDB:1XQUA; LENCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQI ---1--1----------------------------------------------------- LIDIHKAANKVAEDLGIAEKGYRLITNCGVAAGQTVFHLHYHLLGGVDGPKI ---------------------------------------------------- >INHIBITOR OF VERTEBRATE L; SWP:P45502; PDB:1XS0A; DLTISSLAKGETTKAAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDC ------------------------------------------------------1----1 GSQRIAVMWSEKSNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENH ------------------------------------------------------------ PDGFNFRS -------- >PROBABLE RESUSCITATION-PR; SWP:O05594; PDB:1XSFA; NVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAINTGNGYYGGVQFDQG ------------------------------------1----------------------- TWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAGAR ----------------------------------------1------- >variable region-containin; SWP:Q8I9N0; PDB:1XT5A; GQSIMTVRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNW -------------------------1---------------------------------- QGEGLGFVESDSYKESFGDFLGRASVANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEF ------------------------------------------------1----------- GLDAKSVVLKVTGHT --------------- >NATRIN 1; SWP:Q7T1K6; PDB:1XTAA; VDFNSESTRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCSLNHS ------------------------------------------------------1----- PDNLRVLEGIQCGESIYMSSNARTWTEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVW -----------2------------------------------------------------ YQTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTATPYKLGPPCGDCPSACDNGLCTN -------3----1----------3--2------------------4--5---4----5-- PCTIYNKLTNCDSLLKQSSCQDDWIKSNCPASCFCRNKII -6--------7--------8--------7---8-6----- >Cholera enterotoxin subun; SWP:P01556; PDB:1XTCD; TPQNITDLCAEYHNTQIYTLNDKIFSYTESLAGKREMAIITFKNGAIFQVEVPSSQHIDS --------1--------------------------------------------------- QKKAIERMKDTLRIAYLTEAKVEKLCTWNNKTPHAIAAISMAN -------------------------1----------------- >Hypothetical superoxide d; SWP:O31851; PDB:1XTMA; AFGHHVQLVNREGKAVGFIEIKESDDEGLDIHISANSLRPGASLGFHIHEKGSCVRPDFE -----------------------------------------------------1------ SAGGHFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDED ------------------------------------------------------------ GSAFIIHEQADDYLTNPSGNSGARIVCGALLG --------------------------1----- >Tumor necrosis factor rec; SWP:O14836; PDB:1XU1R; SLSCRKEQGKFYDHLLRDCISCASICGQHPKQCAYFCE ---1--------------1--2---3------2---3- >Tumor necrosis factor rec; SWP:Q02223; PDB:1XU2R; CSQNEYFDSLLHACIPCQLRCSSNTPPLTCQRYCNA 1------------1--2---3--------2---3-- >VARIANT SURFACE GLYCOPROT; SWP:P26332; PDB:1XU6A; GSHMLEVLTQKHKPAESQQQAAETEGSCNKKDQNECKSPCKWHNDAENKKCTLDKEEAKK ---------------------------1-------2---1----------2--------- VADETAKDGKTGNTNTTGSS -------------------- >MN TRANSPORTER; SWP:Q79EF9; PDB:1XVLA; GETEEKKKVLTTFTVLADMVQNVAGDKLVVESITRIGAEIHGYEPTPSDIVKAQDADLIL ------------------------------------------------------------ YNGMNLERWFEQFLGNVKDVPSVVLTEGIEPIPIADGPYTDKPNPHAWMSPRNALVYVEN ------------------------------------------------------------ IRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLAR --------------------------------------------------1--------- DYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQATGARF ---------------------------------------1-------------------- GGNLYVDSLSTEEGPVPTFLDLLEYDARVITNGLLAGTN --------------------------------------- >THIOREDOXIN; SWP:Q9V429; PDB:1XWAA; AMVYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVD --------------------------------1--1------------------------ VDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGANAKRLEDVIKANI ----------------------------------------------- >Follicle-stimulating horm; SWP:P23945; PDB:1XWDC; CHHRICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEI 1----2-1------2--------------------------------------------- SQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD ------------------------------------------------------------ VHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDE ------------------------------------------------------------ LNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLKKLPT ------------------------------------------------------------ LE -- >COMPLEMENT C5; SWP:P01031; PDB:1XWEA; GSHMADCGQMQEELDLTISAETRKQTACKPEIAYAYKVSITSITVENVFVKYKATLLDIY ------1--------------------2-------------------------------- KTGEAVAEKDSEITFIKKVTCTNAELVKGRQYLIMGKEALQIKYNASFRYIYPLDSLTWI --------------------1--------------------------------------- EYWPRDTTCSSCQAFLANLDEFAEDIFLNGC ------------------------------2 >DER F II; SWP:Q00855; PDB:1XWVA; DQVDVKDCANNEIKKVMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDG -------1------------2-----2--------------------------------- LEIDVPGIDTNACHFMKCPLVKGQQYDAKYTWNVPKIAPKSENVVVTVKLVGDNGVLACA ------------3----3----------------------------------------1- IATHAKIRD --------- >SPHINGOMYELINASE I; SWP:Q8I914; PDB:1XX1A; ADNRRPIWNLAHMVNAVAQIPDFLDLGANALEADVTFKGSVPTYTYHGTPCDFGRDCIRW --------------------------------------------------1-----1--- EYFNVFLKTLREYTTPGNAKYRDGFILFVLDLKTGSLSNDQVRPAGENVAKELLQNYWNN ------------------------------------------------------------ GNNGGRAYVVLSLPDIGHYEFVRGFKEVLKKEGHEDLLEKVGYDFSGPYLPSLPTLDATH ------------------------------------------------------------ EAYKKAGVDGHIWLSDGLTNFSPLGDMARLKEAIKSRDSANGFINKIYYWSVDKVSTTKA ------------------------------------------------------------ ALDVGVDGIMTNYPNVLIGVLKESGYNDKYRLATYDDNPWETFKN --------------------------------------------- >Ecotin [Precursor]; SWP:P23827; PDB:1XXDC; PLEKIAPYPQAEKGMKRQVIQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLENKTLE --------------------------------------------1--------------- GWGYDYYVFDKVSSNDFTRVVCPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDV ---------------------1-------------------------------------- KYRVWKAEEKIDNAVVR ----------------- >ENTEROTOXIN; SWP:Q5D1K7; PDB:1XXGA; QPDPKLDELNKVSDYKSNKGTMGNVMNLYMSPPVEGRGVINSRQFLSHDLIFPIEYKSYN ------------------------------------------------------------ EVKTELENTELANNYKGKKVDIFGVPYFYTCIIPKSEPFGGCCMYGGLTFNSSENRDKLI ------------------------------1-----------1----------------- TVQVTIDNRQSLGFTITTNKNMVTIQELDYKARHWLTKEKKLYEFDGSAFESGYIKFTEK ------------------------------------------------------------ NNTSFWFDLFPKKELVPFVPYKFLNIYGDNKVVDSKSIKMEVFLNTH ----------------------------------------------- >PHOSPHOLIPASE A2 HOMOLOG ; SWP:Q9I834; PDB:1XXSA; SLFELGKMILQETGKNPAKSYGVYGCNCGVGGRGKPKDATDRCCYVHKCCYKKLTGCDPK -------------------------1-2--------------32----45------6--- KDRYSYSWKDKTIVCGENNSCLKELCECDKAVAICLRENLDTYNKKYRYNYLKPACKKAD --------------7-----6----7-5------3--------------------1---- PC -4 >CYCLOPHILIN-LIKE PROTEIN ; SWP:Q9H2H8; PDB:1XYHA; MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTG -----------------1------1----------------------------------- RGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGK ------------------------------------------------------------ VIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFA ---------------------------------------- >MAJOR PRION PROTEIN; SWP:P49927; PDB:1XYQA; VVGGLGGYMLGSAMSRPLIHFGSDYEDRYYRENMYRYPNQVYYRPVDQYSNQNSFVHDCV ----------------------------------------------------------1- NITVKQHTVTTTTKGENFTETDVKMIERVVEQMCITQYQKEYEAYAQRGAS ---------------------------------1----------------- >MAJOR PRION PROTEIN; SWP:P67986; PDB:1XYWA; VVGGLGGYMLGSAMSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYNNQNTFVHDCV ----------------------------------------------------------1- NITVKQHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESEAYYQRGAS ---------------------------------1----------------- >ANTICOAGULANT PROTEIN A; SWP:Q9DEF9; PDB:1Y17A; DCSSSWSSYEGHCYKAFKQSKTWADAESFCTKQVNGGHLVSIESSGEADFVAHLIAQKIK -1----------1----------------2------------------------------ SAKIHVWIGLRAQNKEKQCSIEWSDGSSISYENWIEEESKKCLGVHKATGFRKWENFYCE -----------------------------------------3----------------3- QRDPFVCEA ------2-- >ELASTASE INHIBITOR; SWP:P16895; PDB:1Y1BA; KPDCPLICTMQYDPVCGSDGITYGNACMLLGASCRSDTPIELVHKGRC ---1---2-------3----------2------1-------------3 >ELASTASE INHIBITOR; SWP:P16895; PDB:1Y1CA; KPDAPCICTMQYDPVCGSDGITYGNACMLLCASARSDTPIELVHKGRC -----1-2-------3----------2---1----------------3 >ARSENATE REDUCTASE (ARSC); SWP:O28910; PDB:1Y1LA; KVLFVCIHNTARSVMAEALFNAMAKSWKAESAGVEKAERVDETVKRLLAERGLKAKEKPR ------------------------------------------------------------ TVDEVNLDDFDLIVTVCEESSCVVLPTDKPVTRWHIENPAGKDEGTYRRVLAEIEERVKK ----------------1----1-------------------------------------- LVGE ---- >Aspergillopepsin-2 [Precu; SWP:P24665; PDB:1Y43B; EEYCASAWVGIDGDTCETAILQTGVDFCYEDGQTSYDAWYEWYPDYAYDFSDITISEGDS ---1-----------2-----------1-------------------------------- IKVTVEATSKSSGSATVENLTTGQSVTHTFSGNVEGDLCETNAEWIVEDFESGDSLVAFA --------------------------------------2--------------------- DFGSVTFTNAEATSGGSTVGPSDATVMDIEQDGSVLTETSVSGDSVTVTYV --------------------------------------------------- >SULFATASE MODIFYING FACTO; SWP:Q8NBJ7; PDB:1Y4JA; TSMVQLQGGRFLMGTNSPDSRDGEGPVREATVKPFAIDIFPVTNKDFRDFVREKKYRTEA ------------------------------------------------------------ EMFGWSFVFEDFVSDELRNKAQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVS ------------------------------------------------------------ WNDARAYCAWRGKRLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAED -------1---------------------------------------------------- GFHGVSPVNAFPAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHR ------------------------------------------------------------ ARVTTRMGNTPDSASDNLGFRCAADA ---------------------1---- >PHOSPHOLIPASE A2 HOMOLOG ; SWP:P24605; PDB:1Y4LA; SLFELGKMILQETGKNPAKSYGAYGCNCGVLGRGKPKDATDRCCYVHKCCYKKLTGCNPK -------------------------1-2--------------32----45------6--- KDRYSYSWKDKTIVCGENNSCLKELCECDKAVAICLRENLNTYNKKYRYYLKPLCKKADA --------------7-----6----7-5------3-------------------1----- C 4 >HERV-FRD_6p24.1 provirus ; SWP:P60508; PDB:1Y4MA; NIDTMAKALTTMQEQIDSLAAVVLQNRRGLDMLTAAQGGICLALDEKCCFWVN ----------------------------------------1------1----- >HYPOTHETICAL PROTEIN PH13; SWP:O59088; PDB:1Y56A; MRPLDLTEKRGKKVTIYFEGKELEAYEGEKLPVALLANEIYWLTTSNEGRKRGAFTFGPV ------------------------------------------------------------ PMTVNGVKGLEARRIKVKDGMKIERQGYYDFHEEEIERVVVDVAIIGGGPAGIGAALELQ ------------------------------------------------------------ QYLTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKLNENTKIYLETSALGVFD ------------------------------------------------------------ KGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENNDMPGVFRRDFALEVMNVWEVA ------------------------------------------------------------ PGRKVAVTGSKADEVIQELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFA ------------------------------------------------------------ DGRRPDINPITQAGGKLRFRRGYYSPVLDEYHRIKDGIYVAGSAVSIKPHYANYLEGKLV ------------------------------------------------------------ GAYILKEFGYDAQPCIYEEKLREYEPESLSIPRIPLDKFNLEDVQICGCDVSLKKVDEVI ----------------------------------------------1------------- RKGITDLQIIKRLTHLAMGFCQGRYCLFNGAVVVSQRTGKKLSEIDLPVARSPIKNVKMG -------------------------1---------------------------------- ILAR ---- >HYPOTHETICAL PROTEIN RV26; SWP:O06186; PDB:1Y5HA; TTARDINAGVTCVGEHETLTAAAQYREHDIGALPICGDDDRLHGLTDRDIVIKGLAAGLD -----------1-----------------------1------------------------ PNTATAGELARDSIYYVDANASIQELNVEEHQVRRVPVISEHRLVGIVTEADIARHLP ---------------------------------------------------------- >CONKUNITZIN-S1; SWP:P0C1X2; PDB:1Y62A; RPSLCDLPADSGSGTKAEKRIYYNSARKQCLRFDYTGQGGNENNFRRTYDCQRTCL ----1------------------------2--------------------2---1- >Interleukin-10 receptor a; SWP:Q13651; PDB:1Y6KR; GTELPSPPSVWFEAEFFHHILHWTPIPQQSESTCYEVALLRYGIESWNSISQCSQTLSYD ---------------------------------1------------------1------- LTAVTLDLYHSNGYRARVRAVDGSRHSQWTVTNTRFSVDEVTLTVGSVNLEIHNGFILGK ------------------------------------------------------------ IQLPRPKMAPAQDTYESIFSHFREYEIAIRKVPGQFTFTHKKVKHEQFSLLTSGEVGEFC -----------------------------------------------------------2 VQVKPSVASRSNKGMWSKEECISLT --------------------2---- >ALKALINE PHOSPHATASE; SWP:P00634; PDB:1Y6VA; TPEMPVLENRAAQGDITAPGGARRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITA ------------------------------------------------------------ ARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGAL ------------------------------------------------------------ GVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPG -----------------------------------------------1---------1-- NALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDA ------------------------------------------------------------ ASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLA ---------------------------------------------2-------------- QMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEG -----------------------------------2------------------------ NTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIA ------------------------------------------------------------ AYGPHAANVVGLTDQTDLFYTMKAALGLK ----------------------------- >PHOSPHOLIPASE A2 ISOFORM ; SWP:Q5G291; PDB:1Y75A; NTYQFRNMIQCTVPSRSWWDFADYGCYCGCGSGTPVDDLDRCCQVHCNCYRQAGEISGCR ----------1--------------2-3-4-----------53---4-6---------7- PKFKTYTYECSGGTLTCKGDNNACAASSCDCDRLAAICFAGAPYNDNNYNIDLKARCN ---------1------8------7----8-6------5------------------2- >Phospholipase A2 isoform ; SWP:Q5G290; PDB:1Y75B; NIKQFNNMIQCTVPARSWWDFADYGCYCGSGSGSPVDDLDRCCQVHDNCYNAGGGVTGCA ----------1--------------2-3-------------43-----5---------6- PKSKTYTYECSQGTLTCSGENSACAATVCDCDRLAAICFAGAPYNDNNYNIDLKSRCQ ---------1------7------6----7-5------4------------------2- >AGOUTI SIGNALING PROTEIN; SWP:P42127; PDB:1Y7JA; CVATRNSCKPPAPACCDPCASCYCRFFRSACYCRVLSLNC 1------2------31--4--2-5------5-3------4 >Halotolerant alpha-type c; SWP:NA; PDB:1Y7WA; NPNDGYDYMQHGFDWPGLQEGGTTKYPACSGSNQSPIDINTNQLMEPSSRSGTSAVSLNG ----------------------------1------------------------------- LNVDGAQADGITLTNAKVDLEQGMKVTFDQPAANLPTIEIGGTTKSFVPIQFHFHHFLSE ------------------------------------------------------------ HTINGIHYPLELHIVMQEQDPADVATAQLAVIGIMYKYSENGDAFLNSLQTQIEGKIGDG ------------------------------------------------------------ TASYGDTGVSIDNINVKTQLLPSSLKYAGYDGSLTTPGCDERVKWHVFTTPREVTREQMK --------------------------------------1--------------------- LFVDVTMGAHAGADVVNNRMIQDLGDREVYKYNY ---------------------------------- >SEMINAL RIBONUCLEASE; SWP:P00669; PDB:1Y94A; KESAAAKFERQHMDSSTSAASSSNYCNLMMCCRKMTQGKCKPVNTFVHESLADVKAVCSQ -------------------------1-------------2-----------------3-- KKVTCKDGQTNCYQSKSTMRITDCRETGSSKYPNCAYKTTQVEKHIIVACGGKPSVPVHF ----4------4-----------1----------2--------------3---------- DASV ---- >LIPOPROTEIN MXIM; SWP:Q06083; PDB:1Y9LA; EKEWHIVPVSKDYFSIPNDLLWSFNTTNKSINVYSKCISGKAVYSFNAGKFMGNFNVKEV ------------------------------------1----------------------- DGCFMDAQKIAIDKLFSMLKDGVVLKGNKINDTILIEKDGEVKLKLIRGI --1----------------------------------------------- >PUTATIVE IRON BINDING PRO; SWP:Q7VXW9; PDB:1Y9UA; DEVSLYTTREPKLIQPLLDAFAKDSGIKVNTVFVKDGLLERVRAEGDKSPADVLMTVDIG ------------------------------------------------------------ NLIDLVNGGVTQKIQSQTLDSVVPANLRGAEGSWYALSLRDRVLYVEKDLKLDSFRYGDL ------------------------------------------------------------ ADPKWKGKVCIRSGQHPYNTALVAAMIAHDGAEATEKWLRGVKANLARKAAGGDRDVARD ---------1-------------------------------------------------- ILGGICDIGLANAYYVGHMKNAEPGTDARKWGDAIKVVRPTFAGGTHVNISGAAVAAHAP -----1------------------------------------------------------ NKANAVKLLEYLVSEPAQTLYAQANYEYPVRAGVKLDAVVASFGPLKVDTLPVAEIAKYR ------------------------------------------------------------ KQASELVDKVGFDN -------------- >ALKALINE SERINE PROTEASE; SWP:Q65Z69; PDB:1Y9ZA; AETTPWGQTFVGATVLSDSQAGNRTICIIDSGYDRSHNDLNANNVTGTNNSGTGNWYQPG --------------------------1--------------------------------- NNNAHGTHVAGTIAAIANNEGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNS --------------------------------------------------------1--- GGANVVTMSLGGSGSTTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAV ------------------------------------------------------------ DSNLDHAAFSQYTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPS ------------------------------------------------------------ GTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVERVGNQGSSYPEINSTKACKT -------------------2--------2-------3--------------------3-- AGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQ ------------------------------------------------------------ DYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAGRDNQTGYGMIN ----------------------------4------------------------------- AVAAKAYLDESCTGP -----------4--- >CHYMOPAPAIN; SWP:P14080; PDB:1YAL; YPQSIDWRAKGAVTPVKNQGACGSWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSY ---------------------1--------------------------------2----- GCKGGYQTTSLQYVANNGVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNETSFL -1-------------------------------2-------------------------- GALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKLDHAVTAVGYGTSDGKNYIIIKNSWG ------------------------------3----------------------------- PNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFKGFA ---------------------3-------------- >HEPATOCYTE GROWTH FACTOR ; SWP:Q04756; PDB:1YBWA; ACGRRHKKIIGGSSSLPGSHPWLAAIYIGDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVS -1------------------------------2-------3-------2----------- VVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQP --------------------------------------------------3--------- ICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISP -1-------------4-------------------------------5------------ NMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVD ---5--------------------4----------------------------------- WINDRI ------ >Kunitz-type protease inhi; SWP:O43278; PDB:1YC0I; QHQHQMHQTEDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECI ------------1--------2---------------3-------2------------3- LACRGV --1--- >anti-VSG immunoglobulin h; SWP:NA; PDB:1YC7A; VQLVESGGGSVQAGGSLRLSCAVSGSTYSPCTTGWYRQAPGKEREWVSSISSPGTIYYQD --------------------1---------2----------------------------- SVKGRFTISRDNAKNTVYLQMNSLQREDTGMYYCQIQCGVRSIREYWGQGTQVTVS ---------------------------------1---2------------------ >PEPTIDOGLYCAN RECOGNITION; SWP:O75594; PDB:1YCKA; CSPIVPRNEWKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLG 1---------------2--------------------3-----3---------------- WCDVGYNFLIGEDGLVYEGRGWNFTGAHSGHLWNPMSIGISFMGNYMDRVPTPQAIRAAQ -2---------------------------------------------------------- GLLACGVAQGALRSNYVLKGHRDVQRTLSPGNQLYHLIQNWPHYRSP ----1------------------------------------------ >MHC CLASS I ANTIGEN; SWP:P17693; PDB:1YDPA; SHSMRYFSAAVSRPGRGEPRFIAMGYVDDTQFVRFDSDSASPRMEPRAPWVEQEGPEYWE ------------------------------------------------------------ EETRNTKAHAQTDRMNLQTLRGYYNQSEASSHTLQWMIGCDLGSDGRLIRGYERYAYDGK ---------------------------------------1-------------------- DYLALNEDLRSWTAADTAAQISKRKCEAANVAEQRRAYLEGTCVEWLHRYLENGKEMLQR ------------------------------------------1----------------- ADPPKTHVTHHPVFDYEATLRCWALGFYPAEIILTWQRDGEDQTQDVELVETRPAGDGTF ---------------------2-------------------------------------- QKWAAVVVPSGEEQRYTCHVQHEGLPEPLMLRWKQ -----------------2----------------- >Beta-galactoside-specific; SWP:Q6ITZ3; PDB:1YF8B; CSASEPTVRIVGRNGMNVDVRDDDFHDGNQIQLWPSKSNNDPNQLWTIKRDGTIRSNGSC -----------------------------------------------------------1 LTTYGYTAGVYVMIFDCNTAVREATIWQIWGNGTIINPRSNLALAASSGIKGTTLTVQTL ----------------1------------------------------------------- DYTLGQGWLAGNDTAPREVTIYGFNDLCMESNGGSVWVETCVSQQNDRWALYGDGSIRPE ---------------------------2------------2------------------- QNQDQCLTSGRDSVAGINIVSCSGGSSGQRWVFTNEGAILNLKNGLAMDVANPGLGQIII -----3---------------3-------------------------------------- YPATGKPNQMWLPVP --------------- >ASPARTIC PROTEASE BLA G 2; SWP:P54958; PDB:1YG9A; KLVHVFINTQYAGITKIGNQNFLTVFDSTSCNVVVASQECVGGACVCP ---------------------------------------1----1--- >HEMOGLOBIN A1 CHAIN; SWP:P80592; PDB:1YHUA; ACAMLERAKVKDEWAKAYGIGAARSKFGDALWRNVFNYAPNARDIFESVNSKDMASPEFK -1---------------------------------------------------------- AHIARVLGGLDRVISMLDNQATLDADLAHLKSQHDPRTIDPVNFVVFRKALIATVAGTFG ------------------------------------------------------------ VCFDVPAWQGCYNIIAKGITGSDAA ----------1-------------- >Giant hemoglobins B chain; SWP:P80592; PDB:1YHUB; DYVCGPLQRLKVKRQWAEAYGSGNSREEFGHFIWSHVFQHSPAARDMFKRVRGDNIHTPA ---1-------------------------------------------------------- FRAHATRVLGGLDMCIALLDDEPVLNTQLAHLAKQHETRGVEAAHYDTVNHAVMMGVENV ------------------------------------------------------------ IGSEVFDQDAWKPCLNVITNGIQG -------------1---------- >HEMOGLOBIN A1 CHAIN; SWP:NA; PDB:1YHUC; AANCADAAAAIVQAQWEDVWSAAAAAASRVSAGEEVFAALFKMVPAAKNLFTRVNVADIN ---1-------------------------------------------------------- SPEFQGHVVRVMGGLDILINALDDIPTLESMLDHLAGQHAVRDGVTGAGFQLMATVLMES ------------------------------------------------------------ LPQVVEGFNPDAWASCLAGIAAAISSAL ---------------1------------ >HEMOGLOBIN A1 CHAIN; SWP:NA; PDB:1YHUD; AASCTTEDRREMQLMWGNVWSAQFTGRRIAIAQAVFKDLFANVPDAVGLFGAVKGDEVNS ---1-------------------------------------------------------- NEFKAHCIRVVNGLDSSIGLLSDPATLNEQLSHLATQHKARSGVTKGGFSAIAQSFLRVM ------------------------------------------------------------ PQVASCFNPDAWSRCFNRITTGMTEPLPA --------------1-------------- >PEPTIDYL-GLYCINE ALPHA-AM; SWP:P14925; PDB:1YI9A; CLGTIGPVTPLDASDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMDTV 1---------------------------------2------------------------- HHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKY -------3-----------2----3----------------------------------- FVLQVHYGDISAFRDNHKDCSGVSVHLTRVPQPLIAGMYLMMSVDTVIPPGEKVVNADIS -------------------1---------------------------------------- CQYKMYPMHVFAYRVHTHHLGKVVSGYRVRNGQWTLIGRQNPQLPQAFYPVEHPVDVTFG 4----------------------------------------------------------- DILAARCVFTGEEICNLYIMYYMEAKYALSFMTCTKNVAPDMFRTIPAEANIPIP ------5-------5------------------4--------------------- >QUINOHEMOPROTEIN ALCOHOL ; SWP:Q4W6G0; PDB:1YIQA; ADIPANVDGARIIAADKEPGNWMSTGRTYDEQRYSPLKQISDQNVGQLGLAWSYKLDLDR ------------------------------------------------------------ GVEATPIVVDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW ------------------------------------------------11---------- KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFG ------------------------------------------------------------ VRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSF ------------------------------------------------------------ AYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWD ------------------------------------------------------------ YTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT ------------------------------------------------------------ GRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEA ------------------------------------------------------------ PKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGG ------------------------------------------------------------ TLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMAGWG ------------------------------------------------------------ GAFSTFAGALSLRAGVQPYAQVLTYKLGGTAKLQEPAPRPDTPKPPALSNDTASIEAGAK ------------------------------------------------------------ LYDGYCSQCHGIHAVSGGVLPDLRKLTPEKHQMFLGILFGGRVPDGMPSFADAFTPEQVD ------------------------------------------------------------ QIHQYLIKRAHDLHQEGDTWKQFS ------------------------ >ADENYLOSUCCINATE LYASE; SWP:Q21774; PDB:1YISA; ASEDKFESVLSTRYCKNSPLVSILSETNKATLWRQLWIWLAEAEKELGLKQVTQDAIDEK ------------------------------------------------------------ SNRDVFDWPFIRSEERKLKHDVAHNHAFGKLCPTAAGIIHLGATSCFVQDNADLIAYRDS ------------------------------------------------------------ IDHILKRFATVIDRLAAFSLKNKEVVTVGRTHYQTASLVTVGKRGVLWAQELLAFQSLSE ------------------------------------------------------------ FRDKRFRGIKGATGTQDSFLTLFAGDESKVEALDELVTKKANFSNRFLITGQTYSRQQDS ------------------------------------------------------------ QLVFSLSLLGAAAKKVCTDIRVLQAFGELLEPKKNPKSERCCALSRKLINAPQEALTILA ----------------1-----------------------1------------------- DQGLERTLDDSAGRRLIPDVLLTAEALLTTLQNIFEGLSVQTDNVKKIVEDEIAFLGLEK ------------------------------------------------------------ ALQTADPFFDSVRDRVVGLVNNPINFTGRCVSQTESFIAKELKPTIDKYLD --------------------------------------------------- >T-cell-specific surface g; SWP:P10747; PDB:1YJDC; NKILVKQSPMLVAYDNAVNLSCKYSYNLFSREFRASLHKGLDSAVEVCVVYGNYSQQLQV ---------------------1-------------------------2------------ YSKTGFNCDGKLGNESVTFYLQNLYVNQTDIYFCKIEVMYPPPYLDNEKSNGTIIHVK -------2-------------------------1------------------------ >T-cell-specific surface g; SWP:P10747; PDB:1YJDH; VQLQQSGPELVKPGTSVRISCEASGYTFTSYYIHWVKQRPGQGLEWIGCIYPGNVNTNYN --------------------1--------------------------------------- EKFKDKATLIVDTSSNTAYMQLSRMTSEDSAVYFCTRSHYGLDWNFDVWGAGTTVTVSSA ----------------------------------1------------------------- KTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDL -------------------------2---------------------------------- YTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIV --------------------2---------------- >MBP PEPTIDE; SWP:NA; PDB:1YMMD; QALSIQEGENATMNCSYKTSINNLQWYRQNSGRGLVHLILIRSNEREKHSGRLRVTLDTS --------------1--------------------------------------------- KKSSSLLITASRAADTASYFCATDTTSGTYKYIFGT --------------------1--------------- >ENDO-1,4-BETA-XYLANASE; SWP:O43097; PDB:1YNA; TTPNSEGWHDGYYYSWWSDGGAQATYTNLEGGTYEISWGDGGNLVGGKGWNPGLNARAIH ------------------------------------------------------------ FEGVYQPNGNSYLAVYGWTRNPLVEYYIVENFGTYDPSSGATDLGTVECDGSIYRLGKTT ------------------------------------------------1----------- RVNAPSIDGTQTFDQYWSVRQDKRTSGTVQTGCHFDAWARAGLNVNGDHYYQIVATEGYF --------------------------------1--------------------------- SSGYARITVADVG ------------- >THROMBOSPONDIN-2; SWP:P35442; PDB:1YO8A; DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRC --1----2-----1---------2--3----------3-----4------5--------4 VNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGH --------5--6-----------------------6-----7------8-----7----- FSDPYKCECQTGYAGDGLICGEDSDLDGWPNLNLVCATNATYHCIKDNCPHLPNSGQEDF ------8-9----------9---------------a-------a----b----------- DKDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEVGDRCDNCPYVHNPAQIDTD --------b---------------c-------------------c--d------------ NNGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDGDGVGDHCDNCPLVHNPDQTDVDN -------d---------------e-------------------e--f------------- DLVGDQCDNNEDIDDDGHQNNQDNCPYISNANQADHDRDGQGDACDPDDDNDGVPDDRDN ------f-----------------g-------------------g--------------- CRLVFNPDQEDLDGDGRGDICKDDFDNDNIPDIDDVCPENNAISETDFRNFQVPLDPKGT h-------------------h---------------i----------------------- TQIDPNWVIRHQGKELVQTANSDPGIAVGFDEFGSVDFSGTFYVNTDRDDDYAGFVFGYQ ------------------------------------------------------------ SSSRFYVVWKQVTQTYWEDQPTRAYGYSGVSLKVVNSTTGTGEHLRNALWHTGNTPGQVR ------------------------------------------------------------ TLWHDPRNIGWKDYTAYRWHLTHRPKTGYIRVLVHEGKQVADSGPIYDQTYAGGRLGLFV ------------------------------------------------------------ FSQEVYFSDLKYECRD -------------i-- >FII; SWP:NA; PDB:1YP1A; ASPQVSVTLQLVVDSSMFAKYNGDAKKIVTVLDTRVNIMKSIFKPLLLLITLSGIEMWTS ------------------------------------------------------------ KDLITVKPAGDLTLSLFADWRQTLLLSRILNDNAQLQTAVDFRGAVVGLAFVGTMCNAKY -------------------------------------------------------1---- SAGIIQDFSAIPLLMAVVMAHELGHNLGMLHDDGYSCDCDVCIMAPSLSSDPTKVFSNCS ------------------------------------2-3--3----------------2- LILYEDFLSNEEPDCIDNA --------------1---- >Chymotrypsinogen A; SWP:P00766; PDB:1YPHC; IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTTSDVVVAGEFDQGS --------------------------1---------------1----------------- SSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTT ------------------------------------------------------------ CVTTGWGLTRY ----------- >Chymotrypsinogen A; SWP:P00766; PDB:1YPHE; ANTPDRLQQASLPLLSNTNCKKYWGTKIKDAMICAGASGVSSCMGDSGGPLVCKKNGAWT -------------------1-------------1--------2----------------- LVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLAAN -----------2------------------------- >oxidised low density lipo; SWP:P78380; PDB:1YPQA; CSAPCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSS ----1----------1----------------2--------------------------- FPFWMGLSRRNPSYPWLWEDGSPLMPHLFRVRGAVSQTYPSGTCAYIQRGAVYAENCILA -------------------------------------------3------------3--- AFSICQKKANL ----2------ >VIRION MEMBRANE PROTEIN; SWP:P07612; PDB:1YPYA; AASIQTTVNTLSERISSKLEQEANASAQTKCDIEIGNFYIRQNHGCNLTVKNMCSADADA ------------------------------1--------------2-------1------ QLDAVLSAATETYSGLTPEQKAYVPAMFTAALNIQTSVNTVVRDFENYVKQTCNSSAVVD ----------------------------------------------------3------- NKLKIQNVIIDECYGAPGSPTNLEFINTGSSKGNCAIKALMQLTTKATTQIAPKQVAGTG ------------2---------------------3------------------------- VQ -- >H2-T22 PROTEIN; SWP:NA; PDB:1YPZE; GDQVEQSPSALSLHEGTDSALRCNFTTTMRSVQWFRQNSRGSLISLFYLASGTKENGRLK ----------------------1------------------------------------- SAFDSKERRYSTLHIRDAQLEDSGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKS ---------------------------1-------------------------------- QPPAKPSVFIMKNGTNVACLVKDFYPKEVTISLRSSKKIVEFDPAIVISPSGKYSAVKLG ------------------2----------------------------------------- QYGDSNSVTCSVQHNSETVHSTDFEAA ---------2----------------- >H2-T22 PROTEIN; SWP:NA; PDB:1YPZF; HGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIF ------------------------------------------------------------ LDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPS ------------------------------------------------------------ DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIRVYWKEKDGNTILDSQEG -------------------------------1---------------------------- DTLKTNDTYMKFSWLTVPERAMGKEHRCIVKHENNKGGADQAIFFPSIKK ---------------------------1---------------------- >D-ALANYL-D-ALANINE CARBOX; SWP:P15555; PDB:1YQSA; LPAPDDTGLQAVLHTALSQGAPGAMVRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGS ------------------------------------------------------------ VTKSFSAVVLLQLVDEGKLDLDASVNTYLPGLLPDDRITVRQVMSHRSGLYDYTNDMFAQ ------------------------------------------------------------ TVPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYSNTNFVVAGMLIEKLTGHSVATE ------------------------------------------------------------ YQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPDEAGGALVDSTEQTVSWAQSAGAVIS ------------------------------------------------------------ STQDLDTFFSALMSGQLMSAAQLAQMQQWTTVNSTQGYGLGLRRRDLSCGISVYGHTGTV ------------------------------------------------1----------- QGYYTYAFASKDGKRSVTALANTSNNVNVLNTMARTLESAFCGKP -----------------------------------------1--- >RNASE L INHIBITOR; SWP:Q8U306; PDB:1YQTA; EEDCVHRYGVNAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDG ---1-----------------------------------------------1-------- VIRAFRGNELQNYFEKLKNGEIRPVVKPQYVDLIPKAVKGKVIELLKKADETGKLEEVVK ------------------------------------------------------------ ALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRL ------------------------------------------------------------ SEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGVYGIFSQPKGTRNGINEFLRGYLKDENV ------------------------------------------------------------ RFRPYEIKFTKTGERVEIERETLVTYPRLVKDYGSFRLEVEPGEIKKGEVIGIVGPNGIG ------------------------------------------------------------ KTTFVKLAGVEEPTEGKIEWDLTVAYKPQYIKADYEGTVYELLSKIDASKLNSNFYKTEL ------------------------------------------------------------ LKPLGIIDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIR ------------------------------------------------------------ HLEKNEKTALVVEHDVLIDYVSDRLVFEGEPGKYGRALPPGREGNRFLASIGITFRRDPD ------------------------------------------------------------ TGRPRANKEGSVKDREQKEKGEYYYIA --------------------------- >Periplasmic [NiFe] hydrog; SWP:P18188; PDB:1YQWQ; PTPQSTFTGPIVVDPITRIEGHLRIMVEVENGKVKDAWSSSQLFRGLEIILKGRDPRDAQ ------------------------------------------------------------ HFTQRACGVCTYVHALASSRCVDDAVKVSIPANARMMRNLVMASQYLHDHLVHFYHLHAL ------------------------------------------------------------ DWVDVTAALKADPNKAAKLAASIAPARPGNSAKALKAVQDKLKAFVESGQLGIFTNAYFL ------------------------------------------------------------ GGHKAYYLPPEVNLIATAHYLEALHMQVKAASAMAILGGKNPHTQFTVVGGCSNYQGLTK ------------------------------------------------------------ DPLANYLALSKEVCQFVNECYIPDLLAVAGFYKDWGGIGGTSNYLAFGEFATDDSSPSKH -------------1---------------------------------------------- LATSQFPSGVITGRDLGKVDNVDLGAIYEDVKYSWYAPGGDGKHPYDGVTDPKYTKLDDK ------------------------------------------------------------ DHYSWMKAPRYKGKAMEVGPLARTFIAYAKGQPDFKKVVDMVLGKLSVPATALHSTLGRT ------------------------------------------------------------ AARGIETAIVCANMEKWIKEMADSGAKDNTLCAKWEMPEESKGVGLADAPRGALSHWIRI ----------1------------------------------------------------- KGKKIDNFQLVVPATWNLGPRGAQGDKSPVEEALIGTPIADPKRPVEILRTVHAFDPCIA ------------------------------------------------------------ CGVH ---- >ALPHA-LACTALBUMIN; SWP:P29752; PDB:1YROA; TELTKCKVSHAIKDIDGYQGISLLEWACVLFHTSGYDTQAVVNDNGSTEYGLFQISDRFW -----1---------------------2-------------------------------- CKSSEFPESENICGISCDKLLDDELDDDIACAKKILAIKGIDYWKAYKPMCSEKLEQWRC 3-----------4---3-------------4-------------------2--------1 EKP --- >Beta-1,4-galactosyltransf; SWP:P08037; PDB:1YROB; LTACPEESPLLVGPMLIEFNIPVDLKLVEQQNPKVKLGGRYTPMDCISPHKVAIIIPFRN ---1-----------------------------------------1-------------- RQEHLKYWLYYLHPILQRQQLDYGIYVINQAGESMFNKAKLLNVGFKEALKDYDYNCFVF --------------------------------------------------------2--- SDVDLIPMNDHNTYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLSINGFPNN ---------------2-------------------------------------------- YWGWGGEDDDIYNRLAFRGMSVSRPNAVIGKTRMIRHSRDKKNEPNPQRFDRIAHTKETM ------------------------------------------------------------ LSDGLNSLTYMVLEVQRYPLYTKITVDIGTPS -------------------------------- >Lipase [Precursor]; SWP:P22088; PDB:1YS1X; ADNYAATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPNG ------------------------------------------------------------ RGEQLLAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHRGSEFA ------------------------------------------------------------ DFVQGVLAYDPTGLSSTVIAAFVNVFGILTSSSNNTNQDALAALKTLTTAQAATYNQNYP ------------------------------------------------------------ SAGLGAPGSCQTGAPTETVGGNTHLLYSWAGTAIQPTISVGGVTGATDTSTIPLVDPANA ---------1-------------------------------------------------- LDPSTLALFGTGTVMVNRGSGQNDGVVSKCSALYGQVLSTSYKWNHLDEINQLLGVRGAN -----------------------------1------------------------------ AEDPVAVIRTHANRLKLAGV -------------------- >FAB FRAGMENT; SWP:NA; PDB:1YUHH; QVQFQQSGAELVKPGASVKLSCKASGYTFTSYLMHWIKQRPGRGLEWIGRIDPNNVVTKF ---------------------1-------------------------------------- NEKFKSKATLTVDKPSSTAYMELSSLTSEDSAVYYCARYAYCRPMDYWGQGTTVTVSSAA -----------------------------------1------------------------ TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGALSSGVHTFPAVLQSDLY ------------------------2----------------------------------- TLSSSVTVPASTWPSGTVTCNVAHPASSTAVDKKIVPR -------------------2------------------ >INTEGRIN BETA-2 A CHAIN; SWP:P05107; PDB:1YUKA; QECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQLLMRGCAADDIMDPT --1----------2------1--3---------------2----------3--------- SLAETQEQKQLSPQKVTLYLRPGQAAAFNVTFRR ---------------------------------- >Integrin beta-2 [Precurso; SWP:P05107; PDB:1YUKB; SRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATECIQEQ ---------------------1-------------1-------------------2---- SFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCEHH --------------------2---3---------4-------3--4-5--------5--- >BETA-LACTOGLOBULIN; SWP:P02755; PDB:1YUPA; IIVTQTMKDLDVQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPGGDLEILLQK ------------------------------------------------------------ WENGKCAQKKIIAEKTEIPAVFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQ -----1---------------------------------------2------------2- CLVRTPEVDDEAMEKFDKALKALPMHIRLSFNPTQLEEQCRV ---------------------------------------1-- >P-30 PROTEIN; SWP:P22069; PDB:1YV4A; DWLTFQKKHITNTRDVDCDNILSTNLFHCKDKNTFIYSRPEPVKAICKGIIASKNVLTTS -----------------1----------2-----------------3------------- EFYLSDCNVTSRPCKYKLKKSTNKFCVTCENQAPVHFVGVGSC ------1------2-----------4--3-------------4 >UROKINASE PLASMINOGEN ACT; SWP:Q9UMV0; PDB:1YWHA; LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTG --1--2-----2----3------1--------------------3--------------- LKITSLTEVVCGLDLCNQGNSGRSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVV ----------4----4------------5--6------6---------7------5---- THWIQRPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNG ---------------7-----8----------------89----9--------------- RQCYSCKGQSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAH --a--b-------b---------c------a------------------c-----d---- LGDAFSMNHIDVSCCTKSGCNHPDLDVQ -------------de----e-------- >PHOSPHOLIPASE A2; SWP:Q6T179; PDB:1YXHA; NIYQFKNMIQCTVPSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNQAQEITGC ----------1--------------2-3--------------43-----5---------6 RPKWKTYTYECSQGTLTCKGRNNACAATVCDCDRLAAICFAGAPYNDNNYNIDLKARCQ ----------1------7------6----7-5------4------------------2- >PHOSPHOLIPASE A2 ISOFORM ; SWP:P60045; PDB:1YXLA; NLYQFKNMIQCTVPSRSWQDFADYGCYCGKGGSGTPVDDLDRCCQVHDNCYNEAENISGC ----------1--------------2-3--------------43-----5---------6 RPYFKTYSYECTQGTLTCKGDNNACAASVCDCDRLAAICFAGAPYNDANYNIDLKARCN ----------1------7------6----7-5------4------------------2- >CETUXIMAB FAB LIGHT CHAIN; SWP:NA; PDB:1YY8A; DILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPS ----------------------1------------------------------------- RFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNRGA -------------2------------------- >CETUXIMAB FAB LIGHT CHAIN; SWP:NA; PDB:1YY8B; QVQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGVIWSGGNTDYN ---------------------1-------------------------------------- TPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALTYYDYEFAYWGQGTLVTVSAA ----------------------------------1------------------------- STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSG -------------------------2---------------------------------- LYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS ---------------------2------------------- >PEROXIDASE MANGANESE-DEPE; SWP:Q02567; PDB:1YYDA; AVCPDGTRVSHAACCAFIPLAQDLQETIFQNECGEDAHEVIRLTFHDAIAISRSQGPKAG --1----------21-----------------3--------------------------- GGADGSMLLFPTVEPNFSANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGA --------------------------------------------------------3--- PRLEFLAGRPNKTIAAVDGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARADK ------------------------------------------------------------ VDQTIDAAPFDSTPFTFDTQVFLEVLLKGVGFPGSANNTGEVASPLPLGSGSDTGEMRLQ ------------------------------------------------------------ SDFALAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVLGHNRNSLIDCSDVVPVPKPAT ------------4-----------------------------------2----------- GQPAMFPASTGPQDLELSCPSERFPTLTTQPGASQSLIAHCPDGSMSCPGVQFNGPA ------------------4---------------------5------5--------- >Envelope glycoprotein gp1; SWP:P35961; PDB:1YYMG; EVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGAGSCNTSVITQACP ------------------------------------1------2-----2--------1- KVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLA -----------3---------4----------4-------3------------------- EEEIVIRSENFTNNAKTIIVQLNESVVINCTGAGHCNLSKTQWENTLEQIAIKLKEQFGN -----------------------------5-----5------------------------ NKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDRNITLPCRIKQIINMWQEVG ----------------------6------7----------------7------------- KAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKI -------------6---------------------------------------------- E - >LEU/ILE/VAL-BINDING PROTE; SWP:P02917; PDB:1Z15A; EDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVA ----------------------------------------------------1------- VANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTARGYQLILRTTGL -----------------1------------------------------------------ DSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARAVQDGLKKGNANVVFFDGITAGEK ------------------------------------------------------------ DFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGES ------------------------------------------------------------ AEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSDDPAEI ------------------------------------------------------------ AKYLKANSVDTVMGPLTWDEKGDLKGFEFGVFDWHANGTATDAK -------------------------------------------- >DISINTEGRIN; SWP:Q5EE07; PDB:1Z1XA; NSVHPCCDPVKCEPREGEHCISGPCCRNCKFLNAGTICKRAMLDGLHDYCTGVTSDCPRN -----1-------------2----32--1--------4-----------3------4--- RYNH ---- >OOKINETE SURFACE PROTEIN ; SWP:O96555; PDB:1Z1YA; AVTVDTICNGQLVQMSNHFCMCNEGLVHLSENTCEENECETLGACGEFGQCIENPDPAQV -------1-----------1-2-----------2----3-----4-----3--------- NMYCGCIEGYTLEDTCVLDVCQYNCGESGECIVEYLSEIQSAGCSCAIGVPNPEDECTTG ---4-5---------5----6---7-----6------------7-8----------8--- ETACQLCNTDNEVCNVEGVYCQCMEGFTFDENVCLGPHH ---9--a------9------a-b----------b----- >INSECTICYANIN A FORM; SWP:P00305; PDB:1Z24A; GDIFYPGYCPDVKPVNDFDLSAFAGAWHEIAKLPLENENQGKCTIAEYKYDGKKASVYNS --------1---------------------------------2----------------- FVSNGVKEYMEGDLEIAPDAKYTKQGKYVMTFKFGQRVVNLVPWVLATDYKNYAINYNCD ----------------------------------------------------------1- YHPDKKAHSIHAWILSKSKVLEGNTKEVVDNVLKTFSHLIDASKFISNDFSEAACQYSTT ------------------------------------------------------2----- YSLTGPDRH --------- >NATURAL KILLER CELL RECEP; SWP:Q07763; PDB:1Z2KA; CPDSSEEVVGVSGKPVQLRPSNIQTKDVSVQWKKTEQGSHRKIEILNWYNDGPSWSNVSF 1----------------------------------------------------------- SDIYGFDYGDFALSIKSAKLQDSGHYLLEITNTGGKVCNKNFQLLILD -------------------------------------1---------- >REGULATORY PROTEIN SPX; SWP:O31602; PDB:1Z3EA; HMVTLYTSPSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIIST ----------1--1---------------------------------------------- RSKVFQKLNVNVESMPLQDLYRLINEHPGLLRRPIIIDEKRLQVGYNEDEIRRFLPRKV ----------------------------------------------------------- >THAUMATIN-LIKE PROTEIN; SWP:NA; PDB:1Z3QA; ATFEIVNRCSYTVWAAAVPGGGRQLNQGQSWTINVNAGTTGGRIWGRTGCSFDGSGRGRC --------1----------------------------------------2---------2 QTGDCGGVLSCTAYGNPPNTLAEFALNQFNNLDFFDISLVDGFNVPMDFSPTSGGCRGIR ----3-----3--------------------------------------------4---- CAADINGQCPGALKAPGGCNNPCTVFKTDQYCCNSGACSPTDYSQFFKRNCPDAYSYPKD 5-------6---------6---7--------78----8------------5--------- DQTTTFTCPGGTNYRVVFCP -------4----------1- >POLYPROTEIN; SWP:Q80J38; PDB:1Z3RA; ISKGLTYTMCDKAKFTWKRAPTDSGHDTVVMEVAFSGTKPCRIPVRAVAHGAPDVDVAML ---------1------------------------------1------------------- ITPNPTMENNGGGFIEMQLPPGDNIIYVGELKHQWFQKG --------------------------------------- >ANGIOPOIETIN-2; SWP:O15123; PDB:1Z3UA; SFRDCAEVFKSGHTTNGIYTLTFPNSTEEIKAYCDMEAGGGGWTIIQRREDGSVDFQRTW ----1----------------------------1-------------------------- KEYKVGFGNPSGEYWLGNEFVSQLTNQQRYVLKIHLKDWEGNEAYSLYEHFYLSSEELNY ------------------------------------------------------------ RIHLKGLTGTAGKISSISQPGNDFSTKDGDNDKCICKCSQMLTGGWWFDACGPSNLNGMY ---------------------------------2-2-3------------3--------- YPQRQNTNKANGIKWAAWKGSGYSLKATTMMIRPAD ------------------------------------ >APICAL MEMBRANE ANTIGEN 1; SWP:Q7KQK5; PDB:1Z40A; NPWTEYMAKYDIEEVHGSGIRVDLGEDAEVAGTQYRLPSGKCPVFGKGIIIENSNTTFLT -----------------------------------------1------------------ PVATKDGGFAFPPTEPLMSPMTLDEMRHFYKDNKYVKNLDELTLCSRHAGNMIPDNDKNS --------------------------------------------2--------------- NYKYPAVYDDKDKKCHILYIAAQENNGPRYCFCFRPAKDISFQNYTYLSKNVVDNWEKVC --------------2---------------3-3--------------------------1 PRKNLQNAKFGLWVDGNCEDIPHVNEFPAIDLFECNKLVFELSASDQPKQYEQHLTDYEK -----------------4----------------5------------------------- IKEGFKNKNASMIKSAFLPTDRYKSHGKGYNWGNYNTETQKCEIFNVKPTCLINNSSYIA -----------------------------------------5--------4--------- TTALSHPIEVE ----------- >HEMAGGLUTININ-NEURAMINIDA; SWP:P04850; PDB:1Z4VA; INDNRYINGINQFYFSIAEGRNLTLGPLLNMPSFIPTATTPEGCTRIPSFSLTKTHWCYT -------------------------------------------1-------------2-- HNVILNGCQSNQFVSMGIIEPTSAGFPFFRTLKTLYLSDGVNRKSCSISTVPGGCMMYCF -------1-------------------------------------3--------2---3- VSTQPERDDYFSAAPPEQRIIIMYYNDTIVERIINPPGVLDVWATLNPGTGSGVYYLGWV ------------------------------------------------------------ LFPIYGGVIKGTSLWNNQANKYFIPQMVAALCSQNQATQVQNAKSSYYSSWFGNRMIQSG ------------------------------------------------------------ ILACPLRQDLTNECLVLPFSNDQVLMGAEGRLYMYGDSVYYYQRSNSWWPMTMLYKVTIT ---4---------4---------------------------------------------- FTNGQPSAISAQNVPTQQVPRPGTGDCSATNRCPGFCLTGVYADAWLLTNPSSTSTFGSE --------------------------5---------5----------------------- ATFTGSYLNTATQRINPTMYIANNTQIISSQQFGSSGQEAAYGHTTCFRDTGSVMVYCIY ----------------------------------------------6----------6-- IIELSSSLLGQFQIVPFIRQVTLS ------------------------ >AEROLYSIN; SWP:P09167; PDB:1Z52A; PVYPDQLRLFSLGQGVCGDKYRPVNREEAQSVKSNIVGMMGQWQISGLANGWVIMGPGYN ----------------1------------------------------------------- GEIKPGTASNTWCYPTNPVTGEIPTLSALDIPDGDEVDVQWRLVHDSANFIKPTSYLAHY ------------1----------------------------------------------- LGYAWVGGNHSQYVGEDMDVTRDGDGWVIRGNNDGGCDGYRCGDKTAIKVSNFAYNLDPD ------------------------------------2----2------------------ SFKHGDVTQSDRQLVKTVVGWAVNDSDTPQSGYDVTLRYDTATNWSKTNTYGLSEKVTTK ------------------------------------------------------------ NKFKWPLVGETELSIEIAANQSWASQNGGSTTTSLSQSVRPTVPARSKIPVKIELYKADI ------------------------------------------------------------ SYPYEFKADVSYDLTLSGFLRWGGNAWYTHPDNRPNWNHTFVIGPYKDKASSIRYQWDKR ------------------------------------------------------------ YIPGEVKWWDLNWTIQQNGLSTMQNNLARVLRPVRAGITGDFSAESQFAGNIEIGAPVPL ------------------------------------------------------------ AGLRLEIPLDAQELSGLGFNNVSLSVTPAAN ------------------------------- >RC-RNASE 3; SWP:Q9DFY7; PDB:1Z5FA; DWETFQKKHLTDTKKVKCDVEMAKALFDCKKTNTFIYALPGRVKALCKNIRDNTDVLSRD -----------------1----------2-----------------3------------- AFLLPQCDRIKLPCHYKLSSSTNTICITCVNQLPIHFAGVGSCP ------1------2-----------4--3-------------4- >PROCARBOXYPEPTIDASE B; SWP:P09955; PDB:1Z5RA; GHSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPNKPAIFMD ------------------------------------------------------------ CGFHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGYIYTWTKNRM 1------------1---------------------------------------------- WRKTRSTNAGTTCIGTDPNRNFDAGWCTTGASTDPCDETYCGSAAESEKETKALADFIRN ------------2-------------3--------2----3------------------- NLSSIKAYLTIHSYSQMILYPYSYDYKLPENNAELNNLAKAAVKELATLYGTKYTYGPGA ------------------------------------------------------------ TTIYPAAGGSDDWAYDQGIKYSFTFELRDKGRYGFILPESQIQATCEETMLAIKYVTNYV ------------------------------------------------------------ LGHL ---- >FIBROBLAST ACTIVATION PRO; SWP:Q12884; PDB:1Z68A; MRALTLKDILNGTFSYKTFFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSV ------------------------------------------------------------ NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPV ------------------------------------------------------------ GSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNG ------------------------------------------------------------ KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQ ------------------------------------------------------------ EVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEH ------------------------------------------1----------1------ IEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAI ------------------------------------------------------------ NIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDY ---------------------------------------2--2------3---------- AKYYALVCYGPGIPISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDEITL -------3---------------------------------------------------- WYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTA ------------------------------------------------------------ FQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGT ------------------------------------------------------------ GLFKCGIAVAPVSSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIH ----4------------------------------------------------------- GTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQCFS --------------------------------------------------------4-- >VITAMIN K-DEPENDENT PROTE; SWP:P07225; PDB:1Z6CA; KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCAQLCVNY -----1------2----1--------2-3------------3-----4----5---4--- PGGYTCYCDGKKGFKLAQDQKSCEVVS -----5-6--------------6---- >PEPTIDOGLYCAN-RECOGNITION; SWP:Q9GNK5; PDB:1Z6IA; DFVERQQWLAQPPQKEIPDLELPVGLVIALPTNSENCSTQAICVLRVRLLQTYDIESSQK ------------------------------------1-----1----------------- CDIAYNFLIGGDGNVYVGRGWNKMGAHMNNINYDSQSLSFAYIGSFKTIQPSAKQLSVTR ------------------------------------------------------------ LLLERGVKLGKIAPSYRFTASSKLMPSVTDFKADALYASFANWTHWS ----------------------------------------------- >FERRITIN LIGHT CHAIN; SWP:NA; PDB:1Z6OA; ADTCYNDVALDCGITSNSLALPRCNAVYGEYGSHGNVATELQAYAKLHLERSYDYLLSAA ---1-------------------1------------------------------------ YFNNYQTNRAGFSKLFKKLSDEAWSKTIDIIKHVTKRGDKMNFDQHSTMKTERKNYTAEN ------------------------------------------------------------ HELEALAKALDTQKELAERAFYIHREATRNSQHLHDPEIAQYLEEEFIEDHAEKIRTLAG ------------------------------------------------------------ HTSDLKKFITANNGHDLSLALYVFDEYLQKTV -------------------------------- >FERRITIN LIGHT CHAIN; SWP:NA; PDB:1Z6OM; TQCNVNPVQIPKDWITMHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLF --------------------1--------------------------------------- FDAASEEREHAMKLIEYLLMRGELTNDVSSLLQVRPPTRSSWKGGVEALEHALSMESDVT ------------------------------------------------------------ KSIRNVIKACEDDSEFNDYHLVDYLTGDFLEEQYKGQRDLAGKASTLKKLMDRHEALGEF ---------1-------------------------------------------------- IFDKKLLGIDV ----------- >Sulfatase-modifying facto; SWP:Q8NBK3; PDB:1Z70X; LAHSKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGY ------------------------------------------------------------ LTEAEKFGDSFVFEGMLSVAAAPWWLPVKGANWRHPEGPDSTILHRPDHPVLHVSWNDAV ------------------------------------------------------------ AYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGF --1----------------2---------------------------------------- QGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDRVKKGGSYM ------------------------------------------------------------ HRSYYRYRCAARSQNTPDSSASNLGFRCAADRLP --------2------------------1------ >CHORIONIC SOMATOMAMMOTROP; SWP:P01243; PDB:1Z7CA; QTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEETYIPKDQKYSFLSFCFSDSIPTSNLELL ----------------------------------------------1------------- RISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEQILKQTY ------------------------------------------------------------ SKFDTDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSC ----------------1----------------2------2 >Ovomucoid; SWP:P68390; PDB:1Z7KB; VPMDCSRYPNTTSEEGKVMILCNKALNPVCGTDGVTYDNECVLCAHNLEQGTSVGKKHDG ----1----------------2-------3----------2--1---------------- EC -3 >SERINE PROTEASE HEPSIN; SWP:P05981; PDB:1Z8GA; EPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRT ----------------------------1------------2------------------ AGAAGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPIVGGRDTSL ----------3------------------3-1---------2--4--------------- GRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQ ----------------5---------------5--------------------------- LGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKIC ---------------------------------------------4-------------6 TVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQG ------------------------------7---------------7----------8-- DSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEAS -------6---------------------8------------------------------ GMVTQL ------ >Interleukin-2 receptor al; SWP:P01589; PDB:1Z92B; PELCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTSSWDNQCQCTSS ---1------------------------2-3---------------4-------2-3--- CREPPPWENEATERIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLIC 4--------------------------5---------------1---------------5 TG -- >GAPA225; SWP:Q8N126; PDB:1Z9MA; QDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVT ----------------------1------------------------------------- STPHELSISISNVALADEGEYTCSIFTMPVRTAKSLVTVLGIPQ ----------------------1--------------------- >SUPEROXIDE DISMUTASE [CU-; SWP:Q59452; PDB:1Z9NA; EKIVVPVQQLDPQNGNKDVGTVEITESAYGLVFTPKLHDLAHGLHGFHIHEKPSCEPKEK ------------------------------------------------------1----- DGKLVAGLGAGGHWDPKQTQKHGYPWSDDAHMGDLPALFVMHDGSATTPVLAPRLKKLAE ------------------------------------------------------------ VKGHSLMIHAGGDNHSDHPAPLGGGGPRMACGVIK ------------------------------1---- >IGG LIGHT CHAIN; SWP:NA; PDB:1ZA6B; QVQLVQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKY ---------------------1-------------------------------------- NERFKGKATLTADTSASTAYVELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKG -----------------------------------1------------------------ PSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL ---------------------2-------------------------------------- SSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCQPREPQVYTLPPSRDELTKNQV -----------------2------------------------------------------ SLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVF ---3-------------------------------------------------------- SCSVMHEALHNHYTQKSLSLSPGK -3---------------------- >VHL-1; SWP:NA; PDB:1ZA8A; CGESCAMISFCFTEVIGCSCKNKVCYLNSIS 1---2-----3------1-2----3------ >LOC500183 protein; SWP:Q4KM66; PDB:1ZANL; DIQMTQSPASLSASLGETVTIECRASEDIYNALAWYQQKPGKSPQLLIYNTDTLHTGVPS ----------------------1------------------------------------- RFSGSGSGTQYSLKINSLQSEDVASYFCQHYFGYPRTFGGGTKLELKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLASGGASVVCLLNNFYPKDISVKWKIDGSERQNGVLDSVTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKAEYESHNSYTCEVTHKTSTSPVVKSFNRGE -------------2------------------- >NEUROTOXIN; SWP:Q60393; PDB:1ZB7A; PVNIKNFNYNDPINNDDIIMMEPFNDPGPGTYYKAFRIIDRIWIVPERFTYKDVYEYYDP ------------------------------------------------------------ TYLKTDAEKDKFLKTMIKLFNRINSKPSGQRLLDMIVDAIPYLGNASTPPDKFAANVANV ------------------------------------------------------------ SINKKIIQPGAEDQIKGLMTNLIIFGPGPVLSDNFTDSMIMNGHSPISEGFGARMMIRFC -----------------------------------------------------------1 PSCLNVFNNVQENKIFSRRAYFADPALTLMHELIHVLHGLYGIKISNLPITPFMQHSDPV --1--------------------------------------------------------- QAEELYTFGGHDPSVISPSTDMNIYNKALQNFQDIANRLNIVSSAQGSGIDISLYKQIYK ------------------------------------------------------------ NKYDFVEDPNGKYSVDKDKFDKLYKALMFGFTETNLAGEYGIKTRYSYFSEYLPPIKTEK ------------------------------------------------------------ LLDNTIYTQNEGFNIASKNLKTEFNGQNKAVNKEAYEEISLEHLVIYRIAMCKP ------------------------------------------------------ >HYPOTHETICAL PROTEIN PF05; SWP:NA; PDB:1ZD0A; HHHGSLEIRTKVGEICISKVWLTDEQINKLFDRFKGDYQVVNAECADKVIFATIIAIKAV --------------------------------------------1--------------- KEGRSIAKTVPGEILVRLSGNRQIKEAIKKVGAKEGENYIVTFGENASALLQKILSTLEI ------------------------------------------------------------ KELELERCDLEYAKKAFEDIA -------1------------- >REDUCTASE, ASSEMBLY PROTE; SWP:O30064_ARCFU; PDB:1ZE0A; HMREHLKLFSLIFSYPDEDKLGKAIALAEGIGLTEIAQTLKQVDIEALQVEYTSLFISSH ------------------------------------------------------------ PSVPCPPYQSYFEEGSVYGKASLRAAELYSKYGLNYVYESEPPDHISVELEFLSMNPELL ----1------------------------------------------------------- SDFRDWFLEFAKCVEEKSEIYATFARAFRKFLEK ------------1--------------------- >Outer membrane usher prot; SWP:P30130; PDB:1ZE3D; DLYFNPRFLLSRFENGQELPPGTYRVDIYLNNGYMATRDVTFNTGDSEQGIVPCLTRAQL -----------------------------------------------------1------ ASMGLNTASVAGMNLLADDACVPLTTMVQDATAHLDVGQQRLNLTIPQAFMSNRAR --------------------1----------------------------------- >ALKALINE PHOSPHATASE; SWP:P05187; PDB:1ZEDA; IIPVEEENPDFWNREAAEALGAAKKLQPAQTAAKNLIIFLGDGMGVSTVTAARILKGQKK ------------------------------------------------------------ DKLGPEIPLAMDRFPYVALSKTYNVDKHVPDSGATATAYLCGVKGNFQTIGLSAAARFNQ ------------------------------------------------------------ CNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAGTYAHTVNRNWYSDADVPASARQ 1----------------------------------------------------------- EGCQDIATQLISNMDIDVILGGGRKYMFRMGTPDPEYPDDYSQGGTRLDGKNLVQEWLAK --1--------------------------------------------------------- RQGARYVWNRTELMQASLDPSVTHLMGLFEPGDMKYEIHRDSTLDPSLMEMTEAALRLLS ------------------------------------------------------------ RNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERAGQLTSEEDTLSLVTADHSH ------------------------------------------------------------ VFSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGNGPGYVLKDGARPDVTESESGSPEYR ------------------------------------------------------------ QQSAVPLDEETHAGEDVAVFARGPQAHLVHGVQEQTFIAHVMAFAACLEPYTACDLAPPA ----------------------------------------------2------2------ G - >INSULIN; SWP:P01315; PDB:1ZEIA; FVNQHLCGSHLVEALYLVCGERGFFYTDKAAKGIVEQCCTSICSLYQLENYCN ------1-----------2------------------31---3--------2- >PLECTASIN; SWP:Q53I06; PDB:1ZFUA; GFGCNGPWDEDDMQCHNHCKSIKGYKGGYCAKGGFVCKCY ---1----------2---3----------1------2-3- >TRBC1 protein [Fragment]; SWP:Q8N2T6; PDB:1ZGLM; DSVTQMEGPVTLSEEAFLTINCTYTATGYPSLFWYVQYPGEGLQLLLKATKADDKGSNKG ---------------------1-------------------------------------- FEATYRKETTSFHLEKGSVQVSDSAVYFCALSGGDSSYKLIFGSGTRLLVRPDNPDPVYS ----------------------------1------------------------------- VCLFTDFDSQTNDVYITDKTVLDMRSMDFKSNSAVAWSNSDFACANAFNNSIIPEDTF ---------------------------------------------------------- >TRBC1 protein [Fragment]; SWP:Q8N2T6; PDB:1ZGLP; GGGGVTQTPRYLIKTRGQQVTLSCSPISGHRSVSWYQQTPGQGLQFLFEYFNETQRNKGN -----------------------1------------------------------------ FPGRFSGRQFSNSRSEMNVSTLELGDSALYLCASSLADRVNTEAFFGQGTRLTVVEDLKN -------------------------------1---------------------------- VFPPEVAVFEPSEAEISHTQATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQ ------------------------2----------------------------------- PALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAW -----------------------------2------------------------------ G - >NON-STRUCTURAL POLYPROTEI; SWP:Q9WMX2; PDB:1ZH1A; FFSCQRGYKGVWRGDGIMQTTCPCGAQITGHVKNGSMRIVGPRTCSNTWHGTFPINAYTT ------------------------------------------------------------ GPCTPSPAPNYSRALWRVAAEEYVEVTRVGDFHYVTGMTTDNVKCPCQVPAPEFFTEVDG ----------------------------------------------1------------- VRLHRYAPACKPLLREEVTFLVGLNQYLVGSQLPCEPEPDVAV ----------------------------------1-------- >TOLL-LIKE RECEPTOR 3; SWP:O15455; PDB:1ZIWA; VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISK ------------------------------------------------------------ LEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNL -----1--------------------------1--------------------------- ITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI ------------------------------------------------------------ KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFL ------------------------------------------------------------ GLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNL ------------------------------------------------------------ KRSFTKQLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRT ------------------------------------------------------------ LTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGL ------------------------------------------------------------ ENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSN ------------------------------------------------------------ NNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD ------------------------------------------------------------ EIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFR ------------------------------------------------------------ NLTELDMRFNPFDCTCESIAWFVNWINET ----------------------------- >MANNAN-BINDING LECTIN SER; SWP:O00187; PDB:1ZJKA; TAHACPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWD ----1---------------------------2-------------------1------- RPMPACSIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCEAD -----2----3-----------------------------4---------------3--- GFWTSSKGEKSLPVCEPVCGLSARTTGGQIYGGQKAKPGDFPWQVLILGGTTAAGALLYD --------------4---5----------------------------------------- NWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIAL ------------------------------------------------------------ IKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDH ----------------5------------------------------------------- QKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSW --6-------------------6----------7-------------------------- GSMNCEAGQYGVYTKVINYIPWIENIISDF ----7------------------------- >JINGZHAOTOXIN-VII; SWP:NA; PDB:1ZJQA; GCGGLMAGCDGKSTFCCSGYNCSPTWKWCVYARP -1------2------31----2------3----- >F17G ADHESIN SUBUNIT; SWP:Q9RH91; PDB:1ZK5A; AVSFIGSTENDVGPSQGSYSSTHNLPFVYNTGHNIGYQNANVWRISGGFCVGLDGKVDLP -------------------------------------------------1---------- VVGSLDGQSIYGLTEEVGLLIWMGDTNYSRGTAMSGNSWENVFSGWCVGNYVSTQGLSVH ----------------------------------------------1------------- VRPVILKRNSSAQYSVQKTSIGSIRMRPYNGSSAGSVQTTVNFSLNPFTLND ---------------------------------------------------- >MERCURIC REDUCTASE; SWP:P00392; PDB:1ZK7A; MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIA -----------------------------------------1----1------------- HLRRESPFDGGIAATVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFK ------------------------------------------------------------ DDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLKESPYWTSTEALASDTIPERLA ------------------------------------------------------------ VIGSSVVALELAQAFARLGSKVTVLARNTLFFREDPAIGEAVTAAFRAEGIEVLEHTQAS ------------------------------------------------------------ QVAHMDGEFVLTTTHGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTS ------------------------------------------------------------ NPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAALDLTAMPAVVFTDPQVATVGYSE ------------------------------------------------------------ AEAHHDGIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQT ------------------------------------------------------------ AALAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFNKDVKQLSCCAG -------------------------------------------22-- >PEPTIDYL-PROLYL CIS-TRANS; SWP:Q13356; PDB:1ZKCA; SSGLVPRGSGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVI --------------------------1------1-------------------------- QGGDPTGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYL ------------------------------------------------------------ DKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDPYEEADAQIAQERK ------------------------------------------------------------ TQLKVAP ------- >THIOREDOXIN REDUCTASE 2, ; SWP:Q9JLT4; PDB:1ZKQA; QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKL -------------------------------------------------1----1----- MHQAALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFN ------------------------------------------------------------ IKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKE ------------------------------------------------------------ SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFL ------------------------------------------------------------ KGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNP ------------------------------------------------------------ KNQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVP ------------------------------------------------------------ TTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREP ------------------------------------------------------------ PQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLHISKRSGLE ------------------------------------------------------------ PT -- >Major allergen I polypept; SWP:FEL1B_FELCA; PDB:1ZKRA; MEICPAVKRDVDLFLTGTPDEYVEQVAQYKALPVVLENARILKNCVDAKMTEEDKENALS ---1----------------------------------------2--------------- LLDKIYTSPLCVKMAETCPIFYDVFFAVANGNELLLDLSLTKVNATEPERTAMKKIQDCY ----------3------3----------------------------------------2- VENGLISRVLDGLVMTTISSSKDCMG -----------------------1-- >GROWTH/DIFFERENTIATION FA; SWP:Q9UK05; PDB:1ZKZA; AGSHCQKTSLRVNFEDIGWDSWIIAPKEYEAYECKGGCFFPLADDVTPTKHAIVQTLVHL ----1----------------------------2---3---------------------- KFPTKVGKACCVPTKLSPISVLYKDDMGVPTLKYHYEGMSVAECGCR ----------1--------------------------------2-3- >HYPOTENSIVE PHOSPHOLIPASE; SWP:Q8AXY1; PDB:1ZLBA; SLWQFGKMINYVMGESGVLQYLSYGCYCGLGGQGQPTDATDRCCFVHDCCYGKVTGCNPK -------------------------1-2--------------32----45------6--- IDSYTYSKKNGDVVCGGDNPCKKQICECDRVATTCFRDNKDTYDIKYWFYGAKNCQEKSE --------------7-----6----7-5------3-------------------1----- PC -4 >Carboxypeptidase inhibito; SWP:Q5EPH2; PDB:1ZLHB; NECVSKGFGCLPQSDCPQEARLSYGGCSTVCCDLSKLTGCKGKGGECNPLDRQCKELQAE --1------2-----3----------2---13-------4------5------6------ SASCGKGQKCCVWL ---5-----46--- >DIHYDROLIPOYL DEHYDROGENA; SWP:P09622; PDB:1ZMDA; QPIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHY ------------------------------------------1----1------------ YHMAHGTDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKIT ------------------------------------------------------------ GKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMV ------------------------------------------------------------ VIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTK ------------------------------------------------------------ VTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRI ------------------------------------------------------------ PVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHP ------------------------------------------------------------ EVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILG ------------------------------------------------------------ PGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF ---------------------------------------------------- >NEUTROPHIL DEFENSIN 4; SWP:P12838; PDB:1ZMMA; VCSCRLVFCRRTELRVGNCLIGGVSFTYCCT -1-2----3---------2---------31- >DEFENSIN 5; SWP:Q01523; PDB:1ZMPA; ATCYCRTGRCATRESLSGVCEISGRLYRLCCR --1-2----3---------2---------31- >DEFENSIN 6; SWP:Q01524; PDB:1ZMQA; AFTCHCRRSCYSTEYSYGTCTVMGINHRFCCL ---1-2---3---------2---------31- >ANTIBODY CABBCII-10:LYS3; SWP:P00698; PDB:1ZMYA; QVQLVESGGGSVQAGGSLRLSCTASGYTIGPYCMGWFRQAPGGEREAVAAINMGGGITYY ---------------------1----------2--------------------------- ADSVKGRFTISRDNAKNTVTLQMNSLKPEDTAMYYCAADSTIYASYYECGHGLSTGGYGY -----------------------------------1------------2----------- DSWGQGTQVTVSS ------------- >MAJOR URINARY PROTEIN; SWP:P11589; PDB:1ZNDA; EEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLEKSLVLKFHTVR ------------------------------------------------------------ DEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLY ---1-------------------------------------------------------- GREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRC ------------------------------------1 >GUANYLATE KINASE; SWP:P0A5I4; PDB:1ZNWA; VGRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQ --------------------1--------------------------------------- LIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVF ------------------------------------------------------------ LAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRRLESACAELVSL -----------------------------------------------------1------ LV -- >CLM-1; SWP:Q6SJQ7; PDB:1ZOXA; EDPVTGPEEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKN ---------------------1-------------2-------2---------------- RVSIRDNQRDFIFTVTMEDLRMSDAGIYWCGITKGGLDPMFKVTVNIGPV -----------------------------1-------------------- >IRON TRANSPORT MULTICOPPE; SWP:P38993; PDB:1ZPUA; ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMH ------------------------------------------------------------ FHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLF --------------------1--------------------------------------- IIKDDSFPYDYDEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMNLTW ------------------------------------------------------------ EVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLV ------------------------------------------------------------ HTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDF ------------------------------------------------------------ YLQPYEKEAIYGEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQAN ------------------------------------------------------------ NSEIYGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHS ------------------------------------------------------------ FDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVED ------------------------------------------------------------ PFGIQDAHSQQLSENHLEVCQSCSVATEGNAAANTLDLTDLTGENVQHA -------------------1----------------------------- >GLUCOOLIGOSACCHARIDE OXID; SWP:Q6PW77; PDB:1ZR6A; NSINACLAAADVEFHEEDSEGWDMDGTAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAG -----1------------------------------------------------1----- VQISAKGGGHSYGSYGFGGEDGHLMLELDRMYRVSVDDNNVATIQGGARLGYTALELLDQ ------------------------------------------------------------ GNRALSHGTCPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENAD ------------------------------------------------------------ LFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQNTMPR ------------------------------------------------------------ ELSMRLEINANALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLY ------------------------------------------------------------ GADLNITYNYDVHEYFYANSLTAPRLSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGK ------------------------------------------------------------ NSALAAVSNDETAYAHRDQLWLWQFYDSIYDYENNTSPYPESGFEFMQGFVATIEDTLPE ------------------------------------------------------------ DRKGKYFNYADTTLTKEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIAY ------------------------------------------------------- >Heparan sulfate glucosami; SWP:O14792; PDB:1ZRHA; VAPNGSAQQLPQTIIIGVRKGGTRALLEMLSLHPDVAAAENEVHFFDWEEHYSHGLGWYL ------------------------------------------------------------ SQMPFSWPHQLTVEKTPAYFTSPKVPERVYSMNPSIRLLLILRDPSERVLSDYTQVFYNH ------------------------------------------------------------ MQKHKPYPSIEEFLVRDGRLNVDYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDRLIRDP ------------------------------------------------------------ FPEIQKVERFLKLSPQINASNFYFNKTKGFYCLRDSGRDRCLHESKGRAHPQVDPKLLNK -------------------------------1--------1------------------- LHEYFHEPNKKFFELVGRTFDWH ----------------------- >ERYTHROCYTE BINDING ANTIG; SWP:Q25735; PDB:1ZROA; NEVLSNCREKRKGMKWDCKKKNDRSNYVCIPDRRIQLCIVNLAIIKTYTKETMKDHFIEA ------1----------2----------2--------1---------------------- SKKESQLLLKKNDNKYNSKFCNDLKNSFLDYGHLAMGNDMDFGGYSTKAENKIQEVFKGA --------------------3--------------------------------------- HGEISEHKIKNFRKKWWNEFREKLWEAMLSEHKNNICKNIPQEELQITQWIKEWHGEFLL ------------------------------------3----------------------- ERDNRAKLPKSKCKNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKEN ------------4--------5---4---6------------------------------ AENYLIKISENKNDAKVSLLLNNCDAEYSKYCDCKHTTTLVKSVLNGNDNTIKEKREHID -------------------------------6-5-------------------------- LDDFSKFGCDKNSVDTNTKVWECKKPYKLSTKDVCVPPRRQELCLGNIDRIYDKNLLMIK --------7-------------8-----------8--------7---------------- EHILAIAIYESRILKRKYKNKDDKEVCKIINKTFADIRDIIGGTDYWNDLSNRKLVGKIN --------------------------9--------------------------------- TNSNYVHRNKQNDKLFRDEWWKVIKKDVWNVISWVFKDKTVCKEDDIENIPQFFRWFSEW -----------------------------------------9------------------ GDDYCQDKTKMIETLKVECCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYK ----a-------------bc----b---d------------------------------- MYSEFKSIKPEVYLKKYSEKCSNLNFEDEFKEELHSDYKNKCTMCPEV --------------------a--------------------d--c--- >HISTOCOMPATIBILITY 2, M R; SWP:Q860W6; PDB:1ZS8A; SHWLKTFRIVIMEPGILEPRFIQVSYVDSIQYQGFDSRSGMQPRAAWMKQEPPEYWKNET ------------------------------------------------------------ EHAMGASLLARRTLIYMVTENNNKKNDYHTLQEVFGCNVAHDGSFLGGHYGLTYYGYDYI ------------------------------------1----------------------- ILNEDLNSWTTEGKVGGKFNSVTEGWRTYLKGECTERFLRCLDLGKETLLRSDAPRTHVT ---------------------------------1-------------------------- HKVTVTLRCWALGFYPADITLTWKRDGKNHTQDMELPDTRPAGDGTFQKWAAVVVPFGEE --------2--------------------------------------------------- LRYTCHVHHEGLPGPLTLKWG ----2---------------- >BETA-2-MICROGLOBULIN; SWP:P04223; PDB:1ZT1A; MGPHSLRYFHTAVSRPGLGKPRFISVGYVDDTQFVRFDSDAENPRYEPRVRWMEQVEPEY ------------------------------------------------------------ WERNTQIAKGNEQIFRVNLRTALRYYNQSAGGSHTFQRMYGCEVGSDWRLLRGYEQYAYD -----------------------------------------1------------------ GCDYIALNEDLKTWTAADMAALITKHKWEQAGDAERDRAYLEGTCVEWLRRYLQLGNRTD --------------------------------------------1--------------- SPKAHVTRHSRPEDKVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQK -------------------2---------------------------------------- WASVVVPLGKEQYYTCHVYHQGLPEPLTLRWEP ---------------2----------------- >INSULIN-LIKE GROWTH FACTO; SWP:P08833; PDB:1ZT3A; WKEPCRIELYRVVESLAKAQETSGEEISKFYLPNCNKNGFYHSRQCETSMDGEAGLCWCV ----1-----------------------------1----------2----------2-3- YPWNGKRIPGSPEIRGDPNC -------------------3 >T-CELL SURFACE GLYCOPROTE; SWP:P15813; PDB:1ZT4A; RLFPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSNDSDTVRSLKPWSQGTFSDQQWET ------------------------------------------------------------ LQHIFRVYRSSFTRDVKEFAKMLRLSYPLELQVSAGCEVHPGNASNNFFHVAFQGKDILS ------------------------------------1----------------------- FQGTSWEPTQEAPLWVNLAIQVLNQDKWTRETVQWLLNGTCPQFVSGLLESGKSELKKQV ----------------------------------------1------------------- KPKAWLSRGPSPGPGRLLLVCHVSGFYPKPVWVKWMRGEQEQQGTQPGDILPNADETWYL --------------------2--------------------------------------- RATLDVVAGEAAGLSCRVKHSSLEGQDIVLYW ---------------2---------------- >FUSION GLYCOPROTEIN; SWP:P06828; PDB:1ZTMA; ITKLQHVGVLVNSPKGMKISQNFETRYLILSLIPKIEDSNSCGDQQIKQYKRLLDRLIIP -----------------------------------------1------------------ LYDGLRLQKDVIVSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKSVQDYVNKEIVPSIA ------------------------------------------------------------ RLGCEAAGLQLGIALTQHYSELTNIFGDNIGSLQEKGIKLQGIASLYRTNITEIFTTSTV ---1-------------------------------------------------------- DKYDIYDLLFTESIKVRVIDVDLNDYSITLQVRLPLLTRLLNTQIYRVDSISYNIQNREW ------------------------------------------------------------ YIPLPSHIMTKGAFLGGADVKECIEAFSSYICPSDPGFVLNHEMESCLSGNISQCPRTVV ----------------------2--------2--------------3-------3----- KSDIVPRYAFVNGGVVANCITTTCTCNGIGNRINQPPDQGVKIITHKECNTIGINGMLFN ------------------4----4-5----------------------5----------- TNKEGTLAFYTPNDITLNNSVALDPIDISIELNKAKSDLEESKEWIRRSNQKLDSI -------------------------------------------------------- >CHITIN OLIGOSACCHARIDE BI; SWP:Q9KUA3; PDB:1ZU0A; RSELTIVPDFYPTMVRNFNPYLATNLRTTTDFIYEPLVVFNEMKGNTPVFRLAESYKMAD ------------------------------------------------------------ DLMSVTFDIRKGVKWSDGEAFTADDVVYSFGLLKAKPELDQRGINKWVTSVEKVDEYKVR ------------------------------------------------------------ FRLSEANSNVPYEISLIPIVAEHVWKDVKDPTTFTNENPVGTGPFTVIDTFTPQLYIQCR ----------------------------------------------------------1- NPNYWDAANLEVDCLRVPQIANNDQLLGKIVNSELDWTSSFVPDIDRTYAAANPNHHYWY -------------1---------------------------------------------- PAAGTQAFMVNFKNPDPAKKEALDNVDFRRAFSMALDRQTIIDIAFYGSGTVNDFASGLG ------------------------------------------------------------ YAFEAWSDEATHKKYKGFNTYDVEGSKKLLAKAGFKDVNGDGFVETPSGKSFELLIQSPN ------------------------------------------------------------ GWTDFNNTVQLAVEQLQEVGIKAKARTPEFAVYNQAMLEGTYDVAYTNYFHGADPFTYWN ------------------------------------------------------------ SGYNSALQSGDGMPRFAMHYFTDKKLDGLLDSFYKTADKNEQLAIAHGIQKIIAENQVTI ------------------------------------------------------------ PVMSGAWMYQYNTTRFTGWWSEENPKGRPSVWAGIPERLLHVLDLKPVK ------------------------------------------------- >LYSOZYME C; SWP:NA; PDB:1ZV5A; VQLVESGGGSVQAGESLRLSCAASGVTYKNYCIGWFRQAPGKDREGVVFINSDGGITYYA --------------------1----------2---------------------------- DSVKGRFTISQDNAKNTVYLQMNSLKPEDTASYYCAAGYRNYGQCATRYWGQGTQVTVS ----------------------------------1---------2-------------- >LYSOZYME C; SWP:NA; PDB:1ZVHA; DVQLVESGGGSVQAGGSLRLSCAASGYIASINYLGWFRQAPGKEREGVAAVSPAGGTPYY ---------------------1-------------------------------------- ADSVKGRFTVSLDNAENTVYLQMNSLKPEDTALYYCAAARQGWYIPLNSYGYNYWGQGTQ -----------------------------------1------------------------ VTVS ---- >MHC CLASS I ANTIGEN; SWP:Q70UQ4; PDB:1ZVSA; GSHSMKYFYTSMSRPGRGQPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWVEQEGPEYW ------------------------------------------------------------ DRETRNMKTETQNAPVNLRTLLRYYNQSEAGSHTLQRMVGCDLGPDGRLLRGYEQYAYDG ----------------------------------------1------------------- KDYIALNEDLRSWTAADVAAQNTQRKWEAADVAESMRAYLEGQCVEWLPRYLEKGKETLQ -------------------------------------------1---------------- RTDPPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGT ----------------------2------------------------------------- FQKWAAVVVPSGEEQRYTCHVQHEGLPKPHTLKWEPHH ------------------2------------------- >LYSOZYME C; SWP:P00698; PDB:1ZVYA; DVQLVESGGGSVQAGGSLRLSCAASGSTDSIEYMTWFRQAPGKAREGVAALYTHTGNTYY ---------------------1-------------------------------------- TDSVKGRFTISQDKAKNMAYLRMDSVKSEDTAIYTCGATRKYVPVRFALDQSSYDYWGQG -----------------------------------1------------------------ TQVTV ----- >MAJOR STRUCTURAL SUBUNIT ; SWP:P33553; PDB:1ZWTA; MEQSASDSNKSQNAISEVMSATSAINGLYIGQTSYSGLDSTILLNTSAIPDNYKDTTNKK ------------------------------------------------------------ ITNPFGGELNVGPANNNTAFGYYLTLTRLDKAACVSLATLNLGTSAKGYGVNISGENNIT ---------------------------------1-------------------------- SFGNSADQAAKSTAITPAEAATACKNTDSTNKVTYFMK -----------------------1-------------- >INTERCELLULAR ADHESION MO; SWP:P13598; PDB:1ZXQ; KVFEVHVRPKKLAVEPKGSLEVNCSTTCNQPEVGGLETSLNKILLDEQAQWKHYLVSNIS -----------------------1---2-------------------------------- HDTVLQCHFTCSGKQESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDS ------1---2--------------------------------------3---------- LTLFLFRGNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLAVLDLMSRGGNIF ---------------------------------------------3-------------- HKHSAPKMLEIY ------------ >functional macrophage inf; SWP:Q98158; PDB:1ZXTA; VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLM -------12----------------------1---------------2------------ QRLPAIAHH --------- >TRANSCRIPTION REGULATOR, ; SWP:NA; PDB:1ZYBA; HETFDTLLQLPLFQGLCHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEIS ---------------------------------------------------1-------- IVTNAKENIYTVIEQIEAPYLIEPQSLFGNTNYASSYVAHTEVHTVCISKAFVLSDLFRY ----------------------------------------------1------------- DIFRLNYNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKTFKVKDDLARCL ------------------------------------------------------------ DDTRLNISKTLNELQDNGLIELHRKEILIPDAQKLL ------------------------------------ >SERINE PROTEASE; SWP:Q9EB08; PDB:1ZYOA; SFYSPVKAGDEPASLVAIKSGPTTIGFGCRTKIEDCLLTAHHVWCNSMRPTGLAKAGKQV ------------------------------------------------------------ SVEDWEISMSSSDKMLDFAIVRVPTHVWSKLGVKSTPLVCPSSKDVITCYGGSSSDCLMS ------------------------------------------------1----------- GVGSSSTSEFTWKLTHTCPTAAGWSGTPLYSSRGVVGMHVGFEEIGKLNRGVNMFYVANY -----------------1------------------------------------------ LLRS ---- >ALPHA-LIKE NEUROTOXIN BMK; SWP:P45697; PDB:1ZYWA; NSVRDAYIADSHNCVYECARNEYCNDLCTKNGAKSGYCQWVGKYGNGCWCIELPDNVPIK -------------1---2-----3---4---------2---------3-4---------- VGGKCH ----1- >VOLTAGE-GATED POTASSIUM C; SWP:NA; PDB:2A0LC; QIVLTQSPAIMSASLGDRVTMTCTASSSVSSSYLHWYQQKPGSSPKLWIYSTSNLASGVP ----------------------1------------------------------------- ARFSGSGSGTSYSLTISSMEAEDAATYYCHQFHRSLTFGSGTKLE ----------------------------1---------------- >SELENOPROTEIN M; SWP:Q8VHC3; PDB:2A2PA; MTNYRPDWNRLRGLARGRVETCGGCQLNRLKEVKAFVTEDIQLYHNLVMKHLPGADPELV ---------------------1--1----------------------------------- LLSRNYQELERIPLSQMTRDEINALVQELGFYRKSAPEAQVPPEYLWAPAKPPEEASEHD ------------------------------------------------------------ DLEHHHHHH --------- >ALPHA-2U-GLOBULIN; SWP:P02761; PDB:2A2UA; EEASSTRGNLDVAKLNGDWFSIVVASNKREKIEENGSMRVFMQHIDVLENSLGFKFRIKE ------------------------------------------------------------ NGECRELYLVAYKTPEDGEYFVEYDGGNTFTILKTDYDRYVMFHLINFKNGETFQLMVLY ---1-------------------------------------------------------- GRTKDLSSDIKEKFAKLCEAHGITRDNIIDLTKTDRCL ------------------------------------1- >JINGZHAOTOXIN-XI; SWP:P0C247; PDB:2A2VA; ECRKMFGGCSVDSDCCAHLGCKPTLKYCAWDGTF -1------2-----31----2------3------ >SELENOPROTEIN SEP15; SWP:Q9VVJ7; PDB:2A4HA; MASHHHHHHLDQQPAAQRTYAKAILEVCTCKFRAYPQIQAFIQSGRPAKFPNLQIKYVRG ---------------------------1-1------------------------------ LDPVVKLLDASGKVQETLSITKWNTDTVEEFFETHLAKDGAGKNSYSVVEDADGDDDEDY ------------------------------------------------------------ LRTNRI ------ >C4B-BINDING PROTEIN; SWP:P04003; PDB:2A55A; MNCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVYNTF --1------------------------------2--------------1----------- CIYKRCRHPGELRNGQVEIKTDLSFGSQIEFSCSEGFFLIGSTTSRCEVQDRGVGWSHPL 2----3--------------------------4-------------3------------- PQCEILEHHHHHH --4---------- >N-METHYL-D-ASPARTATE RECE; SWP:Q00959; PDB:2A5SA; NHLSIVTLEEAPFVIVEDIDPLETCVRNTVPCRKFVKINNSTNEGMNVKKCCKGFCIDIL ------------------------1------2------------------12-------- KKLSRTVKFTYDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDF ------------------------------------------------------------ SVPFVETGISVMVSRGTQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPYMHQ ------------------------------------------------------------ YMTRFNQRGVEDALVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGI -----------------------------------------3------------------ ALQKGSPWKRQIDLALLQFVGDGEMEELETLWLTGICH ------------------------------------3- >GERMLINE ANTIBODY 36-65 F; SWP:NA; PDB:2A6IB; EVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKQRPGQGLEWIGYINPGNGYTKY ---------------------1-------------------------------------- NEKFKGKTTLTVDKSSSTAYMQLRSLTSEDSAVYFCARSVYYGGSYYFDYWGQGTTLTVS -----------------------------------1------------------------ SAKTTPPSVYPLAPGSANSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLY ------------------------2----------------------------------- TLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRD -------------------2------------------- >EMP46P; SWP:Q12396; PDB:2A6VA; KWNKGYSLPNLLEVTDQQKELSQWTLGDKVKLEEGRFVLTPGKNTKGSLWLKPEYSIKDA ------------------------------------------------------------ MTIEWTFRSFGFRGSTKGGLAFWLKQGNEGDSTELFGGSSKKFNGLMILLRLDDKLGESV ------------------------------------------------------------ TAYLNDGTKDLDIESSPYFASCLFQYQDSMVPSTLRLTYNPLDNHLLKLQMDNRVCFQTR ---------------------1---------------------------------1---- KVKFMGSSPFRIGTSAINDASKESFEILKMKLYDGVIE -------------------------------------- >EMP47P (FORM2); SWP:P43555; PDB:2A6ZA; GSDASKLSSDYSLPDLINTRKVPNNWQTGEQASLEEGRIVLTSNQNSKGSLWLKQGFDLK ------------------------------------------------------------ DSFTMEWTFRSVGYSGQTDGGISFWFVQDSNIPRDKQLYNGPVNYDGLQLLVDNNGPLGP ------------------------------------------------------------ TLRGQLNDGQKPVDKTKIYDQSFASCLMGYQDSSVPSTIRVTYDLEDDNLLKVQVDNKVC -------------------------1---------------------------------1 FQTRKVRFPSGSYRIGVTAQNGAVNNNAESFEIFKMQFFNGV ------------------------------------------ >Complement C3 [Precursor]; SWP:P01024; PDB:2A74C; TCNKFDLKVTIKPAPKNTMILEICTRYRGDQDATMSILDISMMTGFAPDTDDLKQLANGV -1---------------------2------------------------------------ DRYISKYELDKAFSDRNTLIIYLDKVSHSEDDCLAFKVHQYFNVELIQPGAVKVYAYYNL --------------------------------2--------------------------- EESCTRFYHPEKEDGKLNKLCRDELCRCAEENCFIQKDKVTLEERLDKACEPGVDYVYKT ---1----------------3----3------4----------------5---------- RLVKVQLSNDFDEYIMAIEQTIKSGSDEVQVGQQRTFISPIKCREALKLEEKKHYLMWGL ------------------------------------------4----------------- SSDFWGEKPNLSYIIGKDTWVEHWPEEDECQDEENQKQCQDLGAFTESMVVFGCPN -----------------------------6--------6--------------5-- >IMMUNOGLOBULIN LIGHT CHAI; SWP:NA; PDB:2A77H; DVKLVESGGGLVKPGGSLRLSCAASGFTFRNYGMSWVRQTPEKRLEWVAAISGNSLYTSY ---------------------1-------------------------------------- PDSVKGRFTISRDNAKNNLYLQMSSLRSEDTALYFCARHDDYPYFFDVWGAGTTVTASSA -----------------------------------1------------------------ KTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDL -------------------------2---------------------------------- YTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR --------------------2------------------ >If kappa light chain [Fra; SWP:A2NHM3; PDB:2A77L; DVLMTQSPLSLPVSLGDQASISCRCSQSIVKSNGHTYLEWYLQKPGKSPKLLIYKVSNRF ----------------------1------------------------------------- SGVPDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQGSHIPWTFGGGTKLESKRADAAPTV --------------------------------1--------------------------- SIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSM ------------------2----------------------------------------- SSTLTLTKDEYERHNSYTCEATHKTSPIVKSFNR ------------------2--------------- >NEUROTOXIN; SWP:P60277; PDB:2A7TA; GEDGYIADGDNCTYICTFNNYCHALCTDKKGDSGACDWWVPYGVVCWCEDLPTPVPIRGS -----------1---2-----3---4---------2---------3-4------------ GKCR --1- >THIOREDOXIN REDUCTASE; SWP:P52214; PDB:2A87A; AHHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGIT ------------------------------------------------------------ GPELMDEMREQALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYL ------------------------------------------------------------ QVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE ---------------1--1----------------------------------------- FRASKIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIG ------------------------------------------------------------ HEPRSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAI ------------------------------------------------------------ DAERWLAEHAATG ------------- >DIHYDROLIPOYL DEHYDROGENA; SWP:P66004; PDB:2A8XA; THYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYWGGVCLNVGCIPSKALLRNAELVHI ---------------------------------------1----1--------------- FTKDAKAFGISGEVTFDYGIAYDRSRKVAEGRVAGVHFLKKNKITEIHGYGTFADANTLL ------------------------------------------------------------ VDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSANVVTYEEQILSRELPKSIIIAGAGAI ------------------------------------------------------------ GEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGS ------------------------------------------------------------ QVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYRTNVGHI ------------------------------------------------------------ YAIGDVNGLLQLAHVAEAQGVVAAETIAGAETLTLGDHRLPRATFCQPNVASFGLTEQQA ------------------------------------------------------------ RNEGYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTL ------------------------------------------------------------ AQRWDLTASELARNVHTHPTSEALQECFHGLVGHINF ------------------------------------- >RECEPTOR TYROSINE-PROTEIN; SWP:P04626; PDB:2A91A; STQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQDIQEVQ ----1--------------------------1---------------------------- GYVLIAHNQVRQVPLQRLRIVRGTQLFEDNYALAVLDNGDPLPVTGASPGGLRELQLRSL ------------------------------------------------------------ TEILKGGVLIQRNPQLCYQDTILWKDIFHKNNQLALTLIDTNRSRACHPCSPMCKGSRCW ----------------2-----------------------------2--3---4----3- GESSEDCQSLTRTVCAGGCARCKGPLPTDCCHEQCAAGCTGPKHSDCLACLHFNHSGICE ------4-------5---6--5-------67---8---7-------8--9--------9- LHCPALVTYNTDTFESMPNPEGRYTFGASCVTACPYNYLSTDVGSCTLVCPLHNQEVTAE --a--------------------------a---b-----------b---c---------- DGTQKCEKCSKPCARVCYGLGMEHLREVRAVTSANIQEFAGCKKIFGSLAFLPESFDGDP -----c--d---d---e------------------------e------------------ ASNTAPLQPEQLQVFETLEEITGYLYISAWPDSLPDLSVFQNLQVIRGRILHNGAYSLTL ------------------------------------------------------------ QGLGISWLGLRSLRELGSGLALIHHNTHLCFVHTVPWDQLFRNPHQALLHTANRPEDECV -----------------------------f----------------------------f- GEGLACHQLCAKGHCWGPGPTQCVND -----g---h----g-------h--- >Potassium channel toxin a; SWP:P13487; PDB:2A9HE; FTNVSCTTSKECWSVCQRLHNTSRGKCMNKKCRCYS -----1-----2---3----------1----2-3-- >n/a; SWP:NA; PDB:2A9MH; QVQLVESGGNLVQPGGSLRLSCAASGFTFGSFSMSWVRQAPGGGLEWVAGLSARSSLTHY ---------------------1-------------------------------------- ADSVKGRFTISRDNAKNSVYLQMNSLRVEDTAVYYCARRSYDSSGYWGHFYSYMDVWGQG -----------------------------------1------------------------ TLVTVS ------ >ALPHA-AMYLASE; SWP:P56271; PDB:2AAA; LSAASWRTQSIYFLLTDRFGRTDNSTTATCNTGNEIYCGGSWQGIIDHLDYIEGMGFTAI -----------------------------1-------1---------------------- WISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVVP ------------------------------------------------------------ DHMGYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLTMVEDCWEGDTIVSLPDLDTTE -----------------------------2-------------2---------------- TAVRTIWYDWVADLVSNYSVDGLRIDSVLEVQPDFFPGYNKASGVYCVGEIDNGNPASDC -----------------------------------------------------------3 PYQKVLDGVLNYPIYWQLLYAFESSSGSISNLYNMIKSVASDCSDPTLLGNFIENHDNPR ------------------------------------------3----------------- FAKYTSDYSQAKNVLSYIFLSDGIPIVYAGEEQHYAGGKVPYNREATWLSGYDTSAELYT ------------------------------------------------------------ WIATTNAIRKLAIAADSAYITYANDAFYTDSNTIAMAKGTSGSQVITVLSNKGSSGSSYT ------------------------------------------------------------ LTLSGSGYTSGTKLIEAYTCTSVTVDSSGDIPVPMASGLPRVLLPASVVDSSSLCG -------------------4----------------------------------4- >Ricin [Precursor]; SWP:P02879; PDB:2AAIB; ADVCMDPEPIVRIVGRNGLCVDVRDGRFHNGNAIQLWPCKSNTDANQLWTLKRDNTIRSN -------------------1------------------1--------------------- GKCLTTYGYSPGVYVMIYDCNTAATDATRWQIWDNGTIINPRSSLVLAATSGNSGTTLTV --2----------------2---------------------------------------- QTNIYAVSQGWLPTNNTQPFVTTIVGLYGLCLQANSGQVWIEDCSSEKAEQQWALYADGS ------------------------------3------------3---------------- IRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRWMFKNDGTILNLYSGLVLDVRASDP ---------4----------------4--------------------------------- SLKQIILYPLHGDPNQIWLPLF ---------------------- >INVERTASE; SWP:Q43866; PDB:2AC1A; NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWD ------------------------------------------------------------ PHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLRE ------------------------------------------------------------ WKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFL ------------------------------------------------------------ KWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHD ------------------------------------------------------------ YYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSV ------------------------------------------------------------ EDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVY ------------------------------------------------------------ GVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNLE ----------------------------------1------------------------- EYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSLRALID -----------------------1------------------------------------ HSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS --------------------------------------------------------- >ACTINIDAIN PRECURSOR; SWP:P00785; PDB:2ACT; LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKITSGSLISLSEQELIDCGRTQ ---------------------1---------------------------------2---- NTRGCDGGYITDGFQFIINDGGINTEENYPYTAQDGDCDVALQDQKYVTIDTYENVPYNN ----1--------------------------------2---------------------- EWALQTAVTYQPVSVALDAAGDAFKQYASGIFTGPCGTAVDHAIVIVGYGTEGGVDYWIV -----------------------------------3------------------------ KNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPVKY -------------------------3------------ >METHANOL DEHYDROGENASE SU; SWP:P38539; PDB:2AD6A; DADLDKQVNTAGAWPIATGGYYSQHNSPLAQINKSNVKNVKAAWSFSTGVLNGHEGAPLV ------------------------------------------------------------ IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVK ------------------------------------------11---------------- KQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNA -----------------------2----------------------2------------- FDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWY ------------------------------------------------------------ AYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAG ------------------------------------------------------------ VNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGT ------------------------------------------------------------ PVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRA ------------------3----------------------------3------------ GQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWY ------------------------------------------------------------ ATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSMYGVGGWPGVGLVFDL ------------------------------------------------------------ TDPSAGLGAVGAFRELQNHTQMGGGLMVFSL ------------------------------- >VON WILLEBRAND FACTOR; SWP:NA; PDB:2ADFH; QIQLVQSGPELKKPGETVKISCKASGYTFINYGMNWVKQAPGKGLKWMGWKNTNTGETTY ---------------------1-------------------------------------- GEEFRGRFAFSLETSVSTAYLQINNLKNEDTATYFCARDNPYYALDYWGQGTTVTVSSAK -----------------------------------1------------------------ TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLY ------------------------2----------------------------------- TLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR -------------------2------------------ >VON WILLEBRAND FACTOR; SWP:NA; PDB:2ADFL; DIQMTQSPSSLSASLGGKVTITCKASQDINKYIAWYQHKPGKGPRLLIHYTSTLQPGIPS ----------------------1------------------------------------- RFSGSGSGRDYSFSISNLEPEDIATYYCLQYDNLRTFGGGTKLEIKRADAAPTVSIFPPS ---------------------------1-------------------------------- SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTL ------------2----------------------------------------------- TKDEYERHNSYTCEATHKTSTSPIVKSFN ------------2---------------- >Q425 FAB LIGHT CHAIN; SWP:NA; PDB:2ADGA; ETTVTQSPASLSVAIGEKVTIRCITSTDIDDDMNWYQQKPGEPPKFFISEGNTLRPGVPS ----------------------1------------------------------------- RFSSSGYGTDFVFTIENMLSEDVADYYCLQSDTLPLTFGSGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNR -------------2----------------- >NEURAMINIDASE; SWP:Q80DL0; PDB:2AEPA; AEYRNWSKPQCKITGFAPFSKDNSIRLSAGGDIWVTREPYVSCDPDKCYQFALGQGTTLN ----------1-------------------------------2----2------------ NRHSNDTVHDRTPYRTLLMNELGVPFHLGTKQVCIAWSSSSCHDGKAWLHVCVTGHDENA ---------------------------------3-------4---------3-------- TASFIYDGRLVDSIGSWSKKILRTQESECVCINGTCTVVMTDGSASGRADTKILFIEEGK ----------------------------4-5----5------------------------ IVHISPLSGSAQHVEECSCYPRYPGVRCVCRDNWKGSNRPIVDINVKDYSIVSSYVCSGL ----------------6-7--------7-6--------------------------8--- VGDTPRKNDSSSSSHCLNPNNEEGGHGVKGWAFDDGNDVWMGRTISEKFRSGYETFKVIE ---------------8-------------------------------------------- GWSKPNSKLQINRQVIVDRGNRSGYSGIFSVEGKSCINRCFYVELIRGRKQETEVWWTSN -----------------------------------1---9-------------------- SIVVFCGTSGTYGTGSWPDGADINLMPI -----9---------------------- >Ig kappa chain V region M; SWP:P84750; PDB:2AEPL; DILMTQSQKFLSTSVGDRVSVTCKASQNVGTNVAWYQKKPGQSPKPLMYSASYRYSGVPD ----------------------1------------------------------------- RFTGSGSGTDFTLTISNVQSEDLAEYFCQQFNRYPLTFGSGTKLELKRADAAPLNNFYPK ---------------------------1-------------------------------- DTDQDSKDS --------- >SEA RAVEN TYPE II ANTIFRE; SWP:P05140; PDB:2AFPA; QRAGPNCPAGWQPLGDRCIYYETTAMTWALAETNCMKLGGHLASIHSQEEHSFIQTLNAG ------1----------1----------------2------------------------- VVWIGGSACLQAGAWTWSDGTPMNFRSWCSTKPDDVLAACCMQMTAAADQCWDDLPCPAS --------3-------------------4----------35---------4-----5--- HKSVCAMTF ----2---- >GANGLIOSIDE GM2 ACTIVATOR; SWP:P17900; PDB:2AG4A; HMSSFSWDNCDEGKDPAVIRSLTLEPDPIVVPGNVTLSVVGSTSVPLSSPLKVDLVLEKE ---------1-------------------------------------------------- VAGLWIKIPCTDYIGSCTFEHFCDVLDMLIPTGEPCPEPLRTYGLPCHCPFKEGTYSLPK ---------2------2-----3------------4----------4-3----------- SEFVVPDLELPSWLTTGNYRIESVLSSSGKRLGCIKIAASLKGI ---------------------------------1---------- >GANGLIOSIDE GM2 ACTIVATOR; SWP:Q60648; PDB:2AGCA; GGFSWDNCDEGKDPAVIKSLTIQPDPIVVPGDVVVSLEGKTSVPLTAPQKVELTVEKEVA -------1---------------------------------------------------- GFWVKIPCVEQLGSCSYENICDLIDEYIPPGESCPEPLHTYGLPCHCPFKEGTYSLPTSN -------2------2-----3------------4----------4-3------------- FTVPDLELPSWLSTGNYRIQSILSSGGKRLGCIKIAASLKGR -------------------------------1---------- >YVO FAB, LIGHT CHAIN; SWP:NA; PDB:2AGJH; VTLKESGPTLVKPTQTLTLTCTFSGFSLTTTGEGVGWIRQPPGKALEFLAFIYWNDAKRY --------------------1--------------------------------------- NPSLQSRLTITKDASKKQVVLTLTNLDPVDTATYYCARTSGWDIEFEYWGQGTLVTVSSG -----------------------------------1------------------------ SASAPTLFPLVSCENSSPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRG -------------------------2---------------------------------- GKYAATSQVLLPSKDVMQGTDEHVVCKVQHPNGNKEKDVPLPVVI -------------------------2------------------- >Putative uncharacterized ; SWP:Q6P5S8; PDB:2AGJL; EIVLTQSPGTLSLSPGERATLSCRASETVSNDKVAWYQQKPGQAPRLLIYGASSRATGIP ----------------------1------------------------------------- DRFSGSGSGTDFTLSISGLEPEDFVVYYCQQYASSPRTFGQGTKVEIKRTVAAPSVFIFP ----------------------------1------------------------------- PSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTL --------------2--------------------------------------------- TLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC --------------2-------------------- >AROMATIC AMINE DEHYDROGEN; SWP:Q0VKG7; PDB:2AGYA; REVLTGGHSVSAPQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNGHVQVSND ------------------------------------------------------------ GKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGK ------------------------------------------------------------ FIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINL --------------------------------1----------------1---------- GEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWS ------------------------------------------------------------ LLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVA ------------------------------------------------------------ RIPGRDALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG ------------------------------------------------------------ >Aralkylamine dehydrogenas; SWP:Q0VKG6; PDB:2AGYD; EVNSCDYWRHCAVDGFLCSCCGGTTTTCPPGSTPSPISIGTCHNPHDGKDYLISYHDCCG ----1-----2------3-45------6-------------2---------------67- KTACGRCQCNTQTRERPGYEFFLHNDVNWCMANENSTFHCTTSVLVGL ---5--4-1--------------------7---------3-------- >THAUMATIN-LIKE PROTEIN; SWP:P50694; PDB:2AHNA; ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTD --------1-----------------------------------------------2--- ASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTP ------2----3------3----------------------------------------- QGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETC ------4----5-------6---------------6---7--------78---------8 PPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP ------------5----------------4----------1- >RECEPTOR TYROSINE-PROTEIN; SWP:Q15303; PDB:2AHXA; QSVCAGTENKLSSLSDLEQQYRALRKYYENCEVVMGNLEITSIEHNRDLSFLRSVREVTG ---1--------------------------1----------------------------- YVLVALNQFRYLPLENLRIIRGTKLYEDRYALAIFLNYRKDGNFGLQELGLKNLTEILNG ------------------------------------------------------------ GVYVDQNKFLCYADTIHWQDIVRNPWPSNLTLVSTGCGRCHKSCTGRCWGPTENHCQTLT ----------2-------------------------2--3---4---3-------4---- RTVCAEQCDGRCYGPYVSDCCHRECAGGCSGPKDTDCFACMNFNDSGACVTQCPQTFVYN ---5---6---5-------67---8---7-------8--9--------9---a------- PTTFQLEHNFNAKYTYGAFCVKKCPHNFVVDSSSCVRACPSSKMEVEENGIKMCKPCTIC -------------------a---b----------b---c--------------c--d--d PKACDGIGTGSLMSAQTVDSSNIDKFINCTKINGNLIFLVTGIHGDPYNAIEAIDPEKLN ---e------------------------e------------------------------- VFRTVREITGFLNIQSWPPNMTDFSVFSNLVTIGGRVLYSGLSLLILKQQGITSLQFQSL ------------------------------------------------------------ KEISAGNIYITDNSNLCYYHTINWTTLFSTINQRIVIRDNRKAENCTAEGMVCNHLCSSD ----------------f----------------------------f------g---h--- GCWGPGPDQCLSCRRFSRGRICIESCNLYDGEFREFENDSICVECDPQCEKMEDGLLTCH -g-------h--i--------i---j---------------j--k---l---------k- GPGPDNCTKCSHFKDGPNCVEKCPDGLQGANSFIFKYADPDRECHPCHPNCTQGCNGPTS ------l--m--------m---n--------------------n--o---p---o----- HDCIYYPWTGH --p-------- >BETA-ELICITIN CINNAMOMIN; SWP:P15569; PDB:2AIBA; TACTATQQTAAYKTLVSILSESSFSQCSKDSGYSMLTATALPTNAQYKLMCASTACNTMI --1-----------------------2-----------------------3----2---- KKIVALNPPDCDLTVPTSGLVLDVYTYANGFSSKCASL ----------1-----------------------3--- >BOWMAN-BIRK TYPE PROTEASE; SWP:Q8W4Y8; PDB:2AIHA; GDDVKSACCDTCLCTRSQPPTCRCVDVRESCHSACDKCVCAYSNPPQCQCYDTHKFCYKA -------12--3-4-------4-2------5---6--5-7-------7-6------3--- CHNSEIE 1------ >METALLO-BETA-LACTAMASE L1; SWP:P52700; PDB:2AIOA; EVPLPQLRAYTVDASWLQPMAPLQIADHTWQIGTEDLTALLVQTPDGAVLLDGGMPQMAS ------------------------------------------------------------ HLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRTGAKVAANAESAVLLARGGSDD ------------------------------------------------------------ LHFGDGITYPPANADRIVMDGEVITVGGIVFTAHFMAGHTPGSTAWTWTDTRNGKPVRIA ------------------------------------------------------------ YADSLSAPGYQLQGNPRYPHLIEDYRRSFATVRALPCDVLLTPHPGASNWDYAAGARAGA ------------------------------------1----------------------- KALTCKAYADAAEQKFDGQLAKETAG ----1--------------------- >FAB M18, LIGHT CHAIN; SWP:Q6PIH7; PDB:2AJ3A; LQMTQSPSFLSASVGDRVSITCRASQDIQKFLAWYQLTPGDAPKLLMYSASTLQSGVPSR ---------------------1-------------------------------------- FSGSGSGTEFTLTISGLQPEDFATYYCQHLKRYPYTFGQGTKLEISRTVAAPSVFIFPPS --------------------------1--------------------------------- DEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDNKDSTYSLSSTLTL ------------2----------------------------------------------- SKADYEKHKVYACEVTHQGLSSPVTKSFNRGE ------------2------------------- >STRUCTURAL POLYPROTEIN (P; SWP:P03315; PDB:2ALAA; YEHSTVMPNVVGFPYKAHIERPGYSPLTLQMQVVETSLEPTLNLEYITCEYKTVVPSPYV ------------------------------------------------1----------- KCCGASECSTKEKPDYQCKVYTGVYPFMWGGAYCFCDSENTQLSEAYVDRSDVCRHDHAS -23----4---------4---------------2-3-----------------1------ AYKAHTASLKAKVRVMYGNVNQTVDVYVNGDHAVTIGGTQFIFGPLSSAWTPFDNKIVVY ------------------------------------------------------------ KDEVFNQDFPPYGSGQPGRFGDIQSRTVESNDLYANTALKLARPSPGMVHVPYTQTPSGF ------------------------------------------------------------ KYWLKEKGTALNTKAPFGCQIKTNPVRAMNCAVGNIPVSMNLPDSAFTRIVEAPTIIDLT ------------------5-----------5----------------------------- CTVATCTHSSDFGGVLTLTYKTNKNGDCSVHSHSNVATLQEATAKVKTAGKVTLHFSTAS 6----7---------------------8-------------------------------- ASPSFVVSLCSARATCSASCEPPK ---------8-----6---7---- >NON-SPECIFIC LIPID TRANSF; SWP:NA; PDB:2ALGA; MITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP ---1---------2-------------23-------------------4-1--------- GVNPNNAAALPGKCGVSIPYKISASTNCATVK -------------3-------------4---- >Agglutinin-1 [Precursor]; SWP:Q9M6E9; PDB:2AMZB; ICSSHYEPTVRIGGRDGLCVDVSDNAYNNGNPIILWKCKDQLEVNQLWTLKSDKTIRSKG ------------------1------------------1---------------------- KCLTTYGYAPGNYVMIYDCSSAVAEATYWDIWDNGTIINPKSGLVLSAESSSMGGTLTVQ -2----------------2----------------------------------------- KNDYRMRQGWRTGNDTSPFVTSIAGFFKLCMEAHGNSMWLDVCDITKEEQQWAVYPDGSI -----------------------------3------------3----------------- RPVQNTNNCLTCEEHKQGATIVMMGCSNAWASQRWVFKSDGTIYNLYDDMVMDVKSSDPS --------4----------------4---------------------------------- LKQIILWPYTGNANQMWATLF --------------------- >PLASMEPSIN IV; SWP:O60990; PDB:2ANLA; SENDVIELDDVANLMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSIGCSTKHLYDS ----------------------------------------------1----1-------- SKSKSYEKDGTKVEITYGSGTVRGFFSKDLVTLGYLSLPYKFIEVTDTDDLEPLYTAAEF ------------------------------------------------------------ DGILGLGWKDLSIGSIDPIVVELKNQNKIDQALFTFYLPVHDKHSGYLTIGGIEEKFYEG ------------------------------------------------------------ ELTYEKLNHDLFWQVDLDVNFGKTSMEKANVIVDSGTSTITAPTSFINKFFKDLNVIKVP ------------------------------------------------------------ FLPFYITTCNNKDMPTLEFKSANNTYTLEPEYYMEPLLDIDDTLCMLYILPVDIDKNTFI --------2-----------------------------------2--------------- LGDPFMRKYFTVFDYDKESIGFAVAKN --------------------------- >ADAM 10; SWP:Q10741; PDB:2AO7A; CCYKLKPGKQCSPSQGPCCTAHCAFKSKTEKCRDDSDCAKEGICNGITALCPASDPKPNF -1--------2------32---1--------4-----5-----3------4--------- TDCNRHTQVCINGQCAGSICEKHGLEECTCKELCHVCCMKKMEPSTCASTGSVQWNKYFL --6------5----6----7-------8-9---a--97--------8------------- GRTITLQPGSPCNDFRGYCDVFMRCR -----------b------a-----b- >PHOSPHOLIPASE A2 HOMOLOG; SWP:P82950; PDB:2AOZA; NLYQLWKMILQETGKNAAPSYGFYGCNCGVGSRGKPKDATDRCCFVHKCCYKALTDCSPK -------------------------1-2--------------32----45------6--- TDSYSYSWKDKTIVCGKNNPCLKQECECDKAVAICLRDNLDTYNKNYKIYPKPLCKKADD --------------7-----6----7-5------3-------------------1----- C 4 >Ribosome biogenesis prote; SWP:P81303; PDB:2APOB; ERKKCPKCGLYTLKEICPKCGEKTVIPKPPKFSLEDRWGKYRRLKRALKNKN ----1--------------1-------------------------------- >RHIZOPUSPEPSIN; SWP:P06026; PDB:2APR; AGVGTVPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSGQTKYDP -----------------------------------------------1--1--------- NQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFASGPND ------------------------------------------------------------ GLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFK ------------------------------------------------------------ GSLTTVPIDNSRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNNIAASVARAYGA ------------------------------------------------------------ SDNGDGTYTISCDTSAFKPLVFSINGASFQVSPDSLVFEEFQGQCIAGFGYGNWGFAIIG -----------2--------------------------------2--------------- DTFLKNNYVVFNQGVPEVQIAPVAE ------------------------- >CU,ZN SUPEROXIDE DISMUTAS; SWP:P24702; PDB:2APSA; EKLVVQVQQLDPVKGNKDVGTVEITESAYGLVFTPHLHGLAQGLHGFHIHQNPSCEPKEK ------------------------------------------------------1----- DGKLVAGLGAGGHWDPKETKQHGYPWSDNAHLGDLPALFVEHDGSATNPVLAPRLKKLDE ------------------------------------------------------------ VKGHSLMIHEGGDNHSDHPAPLGGGGPRMACGVIK ------------------------------1---- >T CELL RECEPTOR BETA CHAI; SWP:NA; PDB:2APVA; AAVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGVGNTEKGDIP ---------------------1-------------------------------------- DGYKASRPSHEQFSLILVSATPSQSSVYFCASGVGGTLYFGAGTRLSVL -----------------------------1------------------- >T-CELL RECEPTOR BETA CHAI; SWP:P0A0L5; PDB:2AQ2A; EAAVTQSPRNKVAVTGEKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGVGNTEKGDI ----------------------1------------------------------------- PDGYEASRPSQEQFSLILESATPSQTSVYFCASGGGGTLYFGAGTRLSVL ------------------------------1------------------- >Enterotoxin type C-3 [Pre; SWP:P0A0L5; PDB:2AQ2B; SQPDPMPDDLHKSSEFTGTMGNMKYLYDDHYVSATKVKSVDKFLAHDLIYNISDKKLKNY ------------------------------------------------------------ DKVKTELLNEDLAKKYKDEVVDVYGSNYYVNCYFSSKDNVWWPGKTCMYGGITKHEGNHF -------------------------------1--------------1------------- DNGNLQNVLVRVYENKRNTISFEVQTDKKSVTAQELDIKARNFLINKKNLYEFNSSPYET ------------------------------------------------------------ GYIKFIENNGNTFWYDMMPAPGDKFDQSKYLMMYNDNKTVDSKSVKIEVHLTTK ------------------------------------------------------ >SUPEROXIDE DISMUTASE [CU-; SWP:P15453; PDB:2AQMA; ESTTVKMYEALPTGPGKEVGTVVISEAPGGLHFKVNMEKLTPGYHGFHVHENPSCAPGEK ------------------------------------------------------1----- DGKIVPALAAGGHYDPGNTHHHLGPEGDGHMGDLPRLSANADGKVSETVVAPHLKKLAEI ------------------------------------------------------------ KQRSLMVHVGGDNYSDKPEPLGGGGARFACGVIE -----------------------------1---- >SUPEROXIDE DISMUTASE [CU-; SWP:P57005; PDB:2AQPA; ASIEVKVQQLDPVNGNKDVGTVTITESNYGLVFTPDLQGLSAGLHGFHIHENPSCEPKEK ------------------------------------------------------1----- EGKLTAGLGAGGHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDD ------------------------------------------------------------ VRGHSIMIHTGGDNHSDHPAPLGGGGPRMACGVIK ------------------------------1---- >T-cell surface glycoprote; SWP:P01731; PDB:2ARJL; DIVMTQSPSSLAVSAGERVTLNCKASQNVRNNIAWYQQKPGQSPKLLIYYASYRYTGVPD ----------------------1------------------------------------- RFTGDGFGTDFTLAINSVQADDAAFYYCQRIYNSPYTFGAGTKLELIRADAAPTVSIFPP ---------------------------1-------------------------------- SMEQLTSGGASVVCFVNNFYPRDISVKWKIDGSEQRDGVLDSVTDQDSKDSTYSMSSTLS -------------2---------------------------------------------- LTKVEYERHNLYTCEVVHKTSSSPVVKSFNR -------------2----------------- >INHIBIN BETA A CHAIN; SWP:P08476; PDB:2ARPA; GLECDGNICCKKQFFVSFKDIGWNDWIIAPSGYHANYCEGECPSLSFHSTVINHYRMRGH ---1----21---------------------------3---4------------------ SPFANLKSCCVPTKLRPMSMLYYDDGQNIIKKDIQNMIVEECGCS ---------2-------------------------------3-4- >PLASMINOGEN ACTIVATOR INH; SWP:P05120; PDB:2ARRA; DLCVANTLFALNLFKHLAKASPTQNLFLSPWSISSTMAMVYMGSRGSTEDQMASVLQFNE --1--------------------------------------------------------- VKIHSSFRSLSSAINASTGNYLLESVNKLFGEKSASFREEYIRLCQKYYSSEPQAVDFLE ------------------------------------------------------------ CAEEARKKINSWVKTQTKGKIPNLLPEGSVDGDTRMVLVNAVYFKGKWKTPFEKKLFPFR ------------------------------------------------------------ VNSAQRTPVQMMYLREKLNIGYIEDLKAQILELPYAGDVSMFLLLPDADVSTGLELLESE ------------------------------------------------------------ ITYDKLNKWTSKMAEDEVEVYIPQFKLEEHYELRSILRSMGMEDAFNKGRANFSGMSERN ------------------------------------------------------------ DLFLSEVFHQAMVDVNEEGTTGRTGHGGPQFVADHPFLFLIMHKITNCILFFGRFSSP -----------------------------------------------1---------- >NEUROTOXIN ALPHA-IT; SWP:P17728; PDB:2ASCA; MVRDAYIAKNYNCVYECFRDAYCNELCTKNGASSGYCQWAGKYGNACWCYALPDNVPIRV ------------1---2-----3---4---------2---------3-4----------- PGKCR ---1- >ASPARTIC PROTEINASE; SWP:P00799; PDB:2ASI; GSVDTPGYYDFDLEEYAIPVSIGTPGQDFLLLFDTGSSDTWVPHKGCTKSEGCVGSRFFD ----------------------------------------------1-----1------- PSASSTFKATNYNLNITYGTGANGLYFEDSIAIGDITVTKQILAYVDNVRGPTAEQSPNA ------------------------------------------------------------ DIFLDGLFGAAYPDNTAMEAEYGSTYNTVHVNLYKQGLISSPLFSVYMNTNSGTGEVVFG ------------------------------------------------------------ GVNNTLLGGDIAYTDVMSRYGGYYFWDAPVTGITVDGSAAVRFSRPQAFTIDTGTNFFIM ------------------------------------------------------------ PSSAASKIVKAALPDATETQQGWVVPCASYQNSKSTISIVMQKSGSSSDTIEISVPVSKM --------------------------2--------------------------------- LLPVDQSNETCMFIILPDGGNQYIVGNLFLRFFVNVYDFGNNRIGFAPLASAYENE ----------2--------------------------------------------- >ARTEMIN; SWP:Q5T4W7; PDB:2ASKA; ARGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSCRRARSPHDLSLASLLGAGALRPPPG ---1--------------------------2---3------------------------- SRPVSQPCCRPTRYEAVSFMDVNSTWRTVDRLSATACGCLG --------1---------------------------2-3-- >Hepatocyte growth factor-; SWP:P26927; PDB:2ASUB; VVGGHPGNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQ -----------------------1---------------1---2---------------- NPQHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCE ------------------2---------------------------------------3- IAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRVRESEMCTEGLLAPVGACEGDYGG ----------------------------4-------------4----------5------ PLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVM ---3-----------------5----------------------- >NEUROTOXIN ALPHA-IT; SWP:P17728; PDB:2ATBA; MVRDAYIADDVNCVYECFRDAYCNELCTKNGASSGYCQWAGKYGNACWCYALPDNVPIRV ------------1---2-----3---4---------2---------3-4----------- PGKCR ---1- >Aspartate carbamoyltransf; SWP:P0A7F3; PDB:2ATCB; MTHNDKLQVAEIKRGTVINHIPAEIGFKLLSLFKLTETQDRITIGLNLPSGEMGRKDLIK ------------------------------------------------------------ IENTFLSEDEVDELALYAPQATVNRINDYEVVGKSRPSLPERNIDVLVCPDSNCISHAEP ------------------------------------------------1----------- VSSSFAVRRADDIALKCKYCEKEFSHNVVLAN ----------------1--------------- >HYALURONOGLUCOSAMINIDASE; SWP:P49370; PDB:2ATMA; RVFNIYWNVPTFMCHQYDLYFDEVTNFNIKRNSKDDFQGDKIAIFYDPGEFPALLSLKDG -------------1---------------------------------------------- KYKKRNGGVPQEGNITIHLQKFIENLDKIYPNRNFSGIGVIDFERWRPIFRQNWGNMKIH ------------------------------------------------------------ KNFSIDLVRNEHPTWNKKIELEASKRFEKYARFFMEETLKLAKKTRKQADWGYYGYPYCF ----------------------------------------------------------2- NMSPNNLVPECDVTAMHENDKMSWLFNNQNVLLPSVYVRQELTPDQRIGLVQGRVKEAVR ----------2------------------------------------------------- ISNNLKHSPKVLSYWWYVYQDETNTFLTETDVKKTFQEIVINGGDGIIIWGSSSDVNSLS ------------------------------------------------------------ KCKRLQDYLLTVLGPIAINVTEA -1--------------------- >T-cell surface glycoprote; SWP:P10300; PDB:2ATPB; LIQTPSSLLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYG -------------------1---------------------------------------- ESVDKKRNIILESSDSRRPFLSIMNVKPEDSDFYFCATVGSPKMVFGTGTKLTVV -----------------------------------1------------------- >B AND T LYMPHOCYTE ATTENU; SWP:Q7Z6A9; PDB:2AW2A; CDVQLYIKRQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEK 1-----------------------2----1--------3------3-------------- NISFFILHFEPVLPNDNGSYRCSANFQSNLIESHSTTLYVTDVKHHHHHH ---------------------2---------------------------- >SF4 T CELL RECEPTOR BETA ; SWP:Q6GMR4; PDB:2AXJA; DGGITQSPKYLFRKEGQNVTLSCEQNLNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDI ----------------------1------------------------------------- AEGYSVSREKKESFPLTVTSAQKNPTAFYLCASRDRGTEKLFFGSGTQLSVLEDLNKVFP ------------------------------1----------------------------- PEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPA ----------------------2------------------------------------- LNDSRYCLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGR ---------------------------2-------------------------------- AD -- >DISCREPIN; SWP:P84777; PDB:2AXKA; IDTNVKCSGSSKCVKICIDRYNTRGAKCINGRCTCYP ------1-----2---3----------1----2-3-- >HYPOTHETICAL PROTEIN ATU2; SWP:Q8UC14; PDB:2AXOA; AQEAVKGVVELFTSQGCASCPPADEALRKIQKGDVVGLSYHVDYWNYLGWTDSLASKENT ----------------1--1---------------------------------------- ERQYGYRALGRNGVYTPQAILNGRDHVKGADVRGIYDRLDAFKREGQGLNVPVSSKFAGD ------------------------------------------------------------ EVEIDIGAGNGKADVVVAYFTREQTVDVKKSYWHSVYDVQTVGWDGSPTVKLPASVVAKV ------------------------------------------------------------ KKGGCAVLLQTANASGDPAAIVGASILLGNETQLEHH ------------------------------------- >Photosystem II manganese-; SWP:P0A431; PDB:2AXTO; TLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEA ---------------1------------------------1------------------- EFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVK ------------------------------------------------------------ NLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIALPQAKEEELA ------------------------------------------------------------ RANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASI ------------------------------------------------------------ EP -- >DRAD INVASIN; SWP:Q7BG36; PDB:2AXWA; AELHLESRGGSGTQLRDGAKVATGRIICREAHTGFHVWMNERQVDGRAERYVVQSKDGRH ---------------------------1-------------------------------- ELRVRTGGDGWSPVKGEGGKGVSRPGQEEQVFFDVMADGNQDIAPGEYRFSVGGACVVPQ -------------------------------------------------------1---- EKLAAALEHHHHHH -------------- >1,3-1,4-BETA-D-GLUCAN 4-G; SWP:P23904; PDB:2AYH; QTGGSFFEPFNSYNSGTWEKADGYSNGGVFNCTWRANNVNFTNDGKLKLGLTSSAYNKFD -------------------------------1---------------------------- CAEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTKVQF 1----------------------------------------------------------- NYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIM ------------------------------------------------------------ MNLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSN ---------------------------------- >GLUTAREDOXIN-LIKE PROTEIN; SWP:O66753; PDB:2AYTA; MLLNLDVRMQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKI ---------------------------------1--1----------------------- KLDIYSPFTHKEETEKYGVDRVPTIVIEGDKDYGIRYIGLPAGLEFTTLINGIFHVSQRK ------------------------------------------------------------ PQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALANDYITSKVIDASENQD ---------------------------2--2----------------------------- LAEQFQVVGVPKIVINKGVAEFVGAQPENAFLGYIMAVYEKLKREKEQAL -------------------------------------------------- >NUCLEOSOME ASSEMBLY PROTE; SWP:P25293; PDB:2AYUA; IQDRLGSLVGQDSGYVGGLPKNVKEKLLSLKTLQSELFEVEKEFQVEMFELENKFLQKYK ------------------------------------------------------------ PIWEQRSRIISGQEQPKPEQIAKGQEIVESLNETELLVDEEEQVKGIPSFWLTALENLPI ------------------------------------------------------------ VCDTITDRDAEVLEYLQDIGLEYLTDGRPGFKLLFRFDSSANPFFTNDILCKTYFYQKEL --------------------------------------------------1--------- GYSGDFIYDHAEGCEISWKDNAHNVTVDLEMRKQTIEKITPIESFFNFFDPPKIQNEDQD -------------1---------------------------------------------- EELEEDLEERLALDYSIGEQLKDKLIPRAVDWFTGAALEFEFE ------------------------------------------- >AZURIN; SWP:P00280; PDB:2AZAA; AQCEATIESNDAMQYDLKEMVVDKSCKQFTVHLKHVGKMAKSAMGHNWVLTKEADKEGVA --1----------------------1---------------------------------- TDGMNAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTFDVSKLTPGEAYAYFCSFPGHWAM ------------------------------------------------------------ MKGTLKLSN --------- >THIOL:DISULFIDE INTERCHAN; SWP:P0AA86; PDB:2B1KA; LESALIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSA --------------------------------------------1--1------------ QGIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGII ------------------------------------------------------------ RYRHAGDLNPRVWEEEIKPLWEKYSKEAA ----------------------------- >SPE31; SWP:Q3Y6U7; PDB:2B1MA; APESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVDES ---------------------1---------------------------------2---- EGCYNGWHYQSFEWVVKHGGIASEADYPYKARDGKCKANEIQDKVTIDNYGVQILSNEST --1--------------------------------2------------------------ ESEAESSLQSFVLEQPISVSIDAKDFHFYSGGIYDGGNCSSPYGINHFVLIVGYGSEDGV --------------------------------------3--------------------- DYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPIIEK -------------------------------3------------- >Putative uncharacterized ; SWP:Q5XFY8; PDB:2B2XH; EVQLVESGGGLVQPGGSLRLSCAASGFTFSRYTMSWVRQAPGKGLEWVAVISGGGHTYYL ---------------------1-------------------------------------- DSVEGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCTRGFGDGGYFDVWGQGTLVTVSSAK ----------------------------------1------------------------- TTPPSVYPLAPSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVT -----------------2------------------------------------------ VPSSTWPSETVTCNVAHPASSTKVDKKIVP ------------2----------------- >Putative uncharacterized ; SWP:Q5XFY8; PDB:2B2XL; QIQLTQSPSSLSASVGDRVTITCSASSQVNHMFWYQQKPGKAPKPWIYLTSYLASGVPSR ----------------------1------------------------------------- FSGSGSGTDYTLTISSLQPEDFATYYCQQWSGNPWTFGQGTKVEIKRADAAPTVSIFPPS --------------------------1--------------------------------- SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTL ------------2----------------------------------------------- TKDEYERHNSYTCEATHKTSTSPIVKSFNR ------------2----------------- >MAR1 RIBONUCLEASE; SWP:Q20062; PDB:2B34A; ARINPTNSALFVCDLQEKFASNIKYFPEIITTSRRLIDAARILSIPTIVTEQYPKGLGHT ------------1----------------------------------------------- VPTLKEGLAENTPIFDKTKFSMCIPPTEDTLKKVQNVILVGIEAHVCVLQTTYDLLERGL ----------------------------------------------1------------- NVHVVVDAVSSRSHTDRHFAFKQMEQAGAILTTSEATILGLVGGSDHPKFKEVQKLILTS ------------------------------------------------------------ APDTGLVPLSKL ------------ >KALATA B8; SWP:NA; PDB:2B38A; CGETCLLGTCYTTGCTCNKYRVCTKDGSVLN 1---2----3----1-2-----3-------- >C3; SWP:Q2UVX4; PDB:2B39A; TPNILRLESEETVVLEAHGGQGTIQVSVTVHDFPAKKQVLSNENTQLNSNNGYLSTVTIK ------------------------------------------------------------ IPASKELKSDKGHKFVTVVATFGNVQVEKVVLISLQSGYLFIQTDKTIYTPGSTVLYRVF ------------------------------------------------------------ TVDHKLLPVGQTVFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYY ------------------------------------------------------------ EDSPQQVFSAEFEVKEYVLPSFEVQLEPEEKFYYIDDPDGLKVNIIARFLYGEQVDGTAF ------------------------------------------------------------ VIFGVQDGDRRISLTHSLTRVPINDGNGEAILKRQVLLNGVQPSRADALVGKSIYVSATV ------------------------------------------------------------ ILQSGSDMVEAERTGIPIVTSPYQIHFTKTPKFFKPAMPFDLMVYVTNPDGSPARHIPVV ------------------------------------------------------------ TQGSNVQSLTQDDGVAKLSINTQNKRDPLTITVRTKKDNIPEGRQATRTMQALPYNTQGN ------------------------------------------------------------ SNNYLHLSVPRVELKPGETLNVNFHLRTDPGEQAKIRYYTYMIMNKGKLLKVGRQYREPG ------------------------------------------------------------ QDLVVLPLTITSDFIPSFRLVAYYTLINAKGQREVVADSVWVDVKDSCMGTLVVKNGGKE -----------------------------------------------1------------ EKHHRPGQQITLKIEADQGARVGLVAVDKGVFVLNKKNKLTQRKIWDVVEKADIGCTPGS -------------------------------------------------------2---- GRNYAGVFTDAGLTLKTSQGLETQQRADPQCPQSVQLMEKRMDKAGQYSSDLRKCCEDGM ------------------------------2-----------------------34---- RDNPMKFPCQRRAQFILQGDACVKAFLDCCEYITQLRQQHSRDGALDDDIIPEEDIISRS --------5------------3------45------------------------------ QFPESWLWTVIEDLKQADKNGISTKLMNVFLKDSITTWEILAVSLSDKKGICVADPYEVT ---------------------------------------------------1-------- VMQDFFIDLRLPYSVVRNEQVEIRAILYNYREAENLKVRVELLYNPAFCSLATAKKRHQQ ------------------------------------------------6----------- TITIPARSSVAVPYVIVPLKIGLHEVEVKAAVYNHFISDGVKKTLKVVPEGVRVNKTVAV ------------------------------------------------------------ RTLNPEHLGQGGVQREEVPAADLSDQVPDTESETKILLQGTPVAQMTEDAIDGERLKHLI ------------------------------------------------------------ QTPSGCGEQNMIGMTPTVIAVHYLDSTDQWEKFGLEKRQESLELIRKGYTQQLAFRQKSS ------------------------------------------------------------ AYAAFQYRPPSTWLTAYVVKVFALAANLIAIDSKDLCETVKWLILEKQKPDGIFQEDGPV ------------------------------------7----------------------- IHQEMIGGFRDTREKDVSLTAFVLIALHEAKDICEAQVNSLGRSIAKAGDFLENHYRELR ---------------------------------7-------------------------- RPYTVAIAAYALALLGKLEGDRLTKFLNTAKEKNRWEEPNQKLYNVEATSYALLALLARK ------------------------------------------------------------ DYDTTPPVVRWLNEQRYYGGGYGSTQATFMVFQALAQYQKDVPDHKELNLDVSIQLPSRN ------------------------------------------------------------ SAVRHRILWESASLLRSEETKENERFTVKAEGKGQGTLSVVTVYHAKLKGKVSCKKFDLR -----------------------------------------------------8------ VSIRPAPETVKKPQDAKGSMILDICTKYLGDQDATMSILDISMMTGFSPDVEDLKTLSTG ------------------------9----------------------------------- VDRYISKYEMNRDSNKNTLIIYLDKVSHTVEDCLSFKVHQYFNVGLIQPGAVKVYSYYNL --------------------------------9--------------------------- DETCIRFYHPDKEDGMLSKLCHKDTCRCAEENCFTLEDRLDKACEPGVDYVYKTRLIQKK ---8----------------a----a-6----b----------c---------------- LEDDFDEYIMVIENIIKSGSDEVQVKQERKFISHIKCREALKLKEGAHYLVWGVSSDLWG ------------------------------------b----------------------- EKPKISYIIGKDTWVELWPEAEECQDEENQKQCEDLANFTENMVVFGCPN -----------------------d--------d--------------c-- >DEFENSIN; SWP:NA; PDB:2B5BA; EKKCPGRCTLKCGKHERPTLPYNCGKYICCVPVKVK ---1---2---3-----------3----21------ >PROTEIN DISULFIDE-ISOMERA; SWP:P17967; PDB:2B5EA; MQQEAVAPEDSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK ---------------------------------------1--1----------------- NITLAQIDCTENQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQP --------2------2-------------------------------------------- AVAVVADLPAYLANETFVTPVIVQSGKIDADFNATFYSMANKHFNDYDFVSAENADDDFK ------------------------------------------------------------ LSIYLPSAMDEPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQYVESGLPLGY ------------------------------------------------------------ LFYNDEEELEEYKPLFTELAKKNRGLMNFVSIDARKFGRHAGNLNMKEQFPLFAIHDMTE ------------------------------------------------------------ DLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQL ------------------------------------------------------------ VGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEND ------------------------------------------------------------ VRGVVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFDVDGKALYEEAQEKA ------------------------------------------------------------ AEE --- >DIAMINE ACETYLTRANSFERASE; SWP:P21673; PDB:2B5GA; AKFVIRPATAADCSDILRLIKELAKYEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWT ------------------------------------------------------------ PEGHSIVGFAYYFTYDPWIGKLLYLEDFFVSDYRGFGIGSEILKNLSQVARCRCSSHFLV ---------------------------------------------------1-1------ AEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKAT --------------------------------------- >Interleukin-2 receptor su; SWP:P14784; PDB:2B5IB; SQFTCFYNSRAQISCVWSQTSCQVHAWPDRRRWQQTCELLPVSQASWACNLILGAPDSQK ----1---------1------2--------------3-----------3----------- LTTVDIVTLRVLCREGVRWRVMAIQDFKPFENLRLMAPISLQVVHVETHRCNISWEISQA ------------2----------------------------------------------- SHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPLQGEF ------------------------------------------------------------ TTWSPWSQPLAFRTKP ---------------- >Cytokine receptor common ; SWP:P31785; PDB:2B5IC; PLPEVQCFVFNVEYMNCTWQSSSEPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGC ------1---------1-----------------------------2------------2 QLQKKEIHLYQTFVVQLQDPREPRRQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWN ------------------------------------------------------------ NRFLNHCLEHLVQYRTDWDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQ ------3------------------------------------------------3---- HWSEWSHPIHW ----------- >Non-structural protein V; SWP:P11207; PDB:2B5LC; LIETGLNTVEYFTSQQVTGTSSLGKNTIPPGVTGLLTNAPKIAIVPADDKTVPGKPIPNP ------------------------------------------------------------ LLGLDSTPSTQTVLDLSGKTLPSGSYKGVKLAKFGKENLMTRFIEEPRENPDFKRGRDTG ------------------------------------------------------------ GFHRREYSIGWVGDEVKVTEWCNPSCSPITAAARRFECTCHQCPVTCSECERDT -------------------------1-----------1---------------- >Antithrombin-III [Precurs; SWP:P01008; PDB:2B5TI; DICTAKPRDIPMNPMCIYRSPEKIPEATNRRVWELSKANSRFATTFYQHLADSKNDNDNI --1------------2-------------------------------------------- FLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANK ------------------2--------------------------------1-------- ASKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEG ------------------------------------------------------------ RITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEG --------------------------------------------------3--------- KFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMML ------------------------------------------------------------ CVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVN 4----------------------------------------------------------- EEGSEAAASTAVVIAGRSLNPNRVCFKANRPFLVFIREVPLNTIIFMGRVANPCV ------------------------4----------------------------3- >DEFENSIN; SWP:Q4GWV4; PDB:2B68A; GFGCPGNQLKCNNHCKSISCRAGYCDAATLWLRCTCTDCNGKK ---1------2---3----4----1--------2-3--4---- >LACTOTRANSFERRIN; SWP:P24627; PDB:2B6DA; YTRVVWCAVGPEEQKKCQQWSQQSGQNVTCATASTTDDCIVLVLKGEADALNLDGGYIYT ------1---------2------------2--------1--------------------- AGKCGLVPVLAENRKSSKHSSLDCVLRPTEGYLAVAVVKKANEGLTWNSLKDKKSCHTAV ---3-------------------4-------------------------------5---- DRTAGWNIPMGLIVNQTGSCAFDEFFSQSCAPGADPKSRLCALCAGDDQGLDKCVPNSKE -------------------6---------7----------8--7---------8------ KYYGYTGAFRCLAEDVGDVAFVKNDTVWENTNGESTADWAKNLKREDFRLLCLDGTRKPV ----------5----------------------------------------9-------- TEAQSCHLAVAPNHAVVSRSDRAAHVEQVLLHQQALFGKNGKNCPDKFCLFKSETKNLLF -----9-------------------------------------a----a----------- NDNTECLAKLGGRPTYEEYLGTEYVTAIANLKKCSLEACAF -----4---------------------------6----3-- >CHARYBDIN; SWP:P84786; PDB:2B7UA; KAMTVKFTVELDIERLTGQTYTDFIKNLRRSLATWYLHGVPVLPLYNQEADPRGFDLKLT ------------------------------------------------------------ FRGQVTTVRIHRDDLVLRGYQMQGAGKWLELERPSGHLIEGSELLEFGPSYEELAAAAQQ ------------------------------------------------------------ DILDISYNKNALQDAVSKLAVSTNTRDRARSLIVVSQMFCEATRFVDIANHFAFNLESSE ------------------------------------------------------------ PVKLPQWMQNDLEKNWVRFSFMILKSNADPCYKFEPQTIYGKIIKTADELLNFLGIVEQH ------------------------------1----------------------------- PDTRSPPCAAG -------1--- >PURINE NUCLEOSIDE PHOSPHO; SWP:NA; PDB:2B94A; EMQRHIKLTPSQTTPVVLVVGDPGRVDKVKMLCDSYVDLAEYKSVECTYKGQKFLCVSHG ------------------------------------------------------------ VGSAGCAICFEELMNNGAKVIIRAGSCGSLQPTQMKRGDICICNAAVREDRVSHLMIYSD -----1--1--------------------------------------------------- FPAVADFEVYDTLNKVAQELEVPVFNGISLSSDLYYPHKIIPTRLEDYSKANVAVVEMEV ------------------------------------------------------------ ATLMVMGTLRKVKTGGIFIVDGCPLKWNLVPEKLENMIKISLETCARLAKKY ---------------------------------------------------- >HYDROPHOBIN II; SWP:P79073; PDB:2B97A; AVCPTGLFSNPLCCATNVLDLIGVDCKTPTIAVDTGAIFQAHCASKGSKPLCCVAPVADQ --1---------23-----------3----------------2--------14------- ALLCQKAIGT ---4------ >PROPHENOLOXIDASE ACTIVATI; SWP:Q9GRW0; PDB:2B9LA; GHMAVVNIFGNASEYIPPGYEAPLGALTALPRCGTGADQGKKVCIVYHRCDGVTNTVTPE --------------------------------1----------2-----3---------- EVINTTGEGIFDIRENANECESYLDVCCGLPPVVPVLKPSFCGIRNERGLDFKITGQTNE -------------------2------13-------------4------------------ AEYGEFPWMVAVLKANEEQLVCGGSLIAPSVVLTGAHCVNSYQSNLDAIKIRAGEWDTLT ---------------------5---------------5---------------------- EKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDST ------------------------------------------------4----------- ECFASGWGKKEFGSRHRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGE -6--------------------------------7--------------------7---- QGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVYANVAHFRNWIDQEM -----8---------6--------------------8----------------------- QAKGLSTTPYVE ------------ >ENDOCHITINASE (26 KD); SWP:P23951; PDB:2BAA; SVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAF ----------------------1------------------------------------- LAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLS ------------------------1-----------2-------2--------------- HNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSG ------------------------------------------------------------ ADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQR -----------------------3-------------------------------3---- PFA --- >cobalamin biosynthesis pr; SWP:O29536_ARCFU; PDB:2BB3A; HIWIVGSGTCRGQTTERAKEIIERAEVIYGSRRALELAGVVDDSRARILRSFKGDEIRRI ---------1-------------------------------------------------- EEGREREVAVISTGDPVAGLGRVLREIAEDVEIKIEPAISSVQVALARLKVDLSEVAVVD ------------------------------------------------------------ CFDAELTELLKYRHLLILADSHFPLERLGKRRVVLLENLCEGERIREGNADSIELESDYT ---------------------------------------1-------------------- IIFVEREV -------- >TRANSCOBALAMIN II; SWP:P20062; PDB:2BB5A; EMCEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRLSSLQAGTKEDLYLHSLKL --1--------------------------------------------------------- GYQQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRANCEFVRGHKGDRLVSQLKWFLEDE -------------------------------------2---------------------- KRAIGHDHKGHPHTSYYQYGLGILALCLHQKRVHDSVVDKLLYAVEPFHQGHHSVDTAAM --------------------------3--------------------------------- AGLAFTCLKRSNFNPGRRQRITMAIRTVREEILKAQTPEGHFGNVYSTPLALQFLMTSPM ------3----------------------------------------------------- PGAELGTACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLAPRVMLEP --------1-----------------------------------------2--------- AAETIPQTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELGGFTYETQASLSG ------------------------------------------------------------ PYLTSVMGKAAGEREFWQLLRDPNTPLLQGIADYRPKDGETIELRLVSW ------------------------------------------------- >TRANSCOBALAMIN II; SWP:Q9XSC9; PDB:2BB6A; NICEITEVDSTLVERLGQRLLPWMDRLSQEQLNPSIYVGLRLSSLQAGAKEAHYLHSLKL --1--------------------------------------------------------- SYQQSLLRPASNKDDNDSEAKPSMGQLALYLLALRANCEFIGGRKGDRLVSQLKRFLEDE -------------------------------------2---------------------- KRAIGHNHQGHPRTSYYQYSLGILALCVHQKRVHDSVVGKLLYAVEHKPHLLQDHVSVDT --------------------------3--------------------------------- MAMAGMAFSCLELSNLNPKQRNRINLALKRVQEKILKAQTPEGYFGNVYSTPLALQLLMG ---------3-------------------------------------------------- SLRPSVELGTACLKAKAALQASLQHKTFQNPLMISQLLPVLNQKSYVDLISPDCQAPRAL -----------1-----------------------------------------2------ LEPALETPPQAKVPKFIDVLLKVSGISPSYRHSVSVPAGSSLEDILKNAQEHGRFRFRTQ ------------------------------------------------------------ ASLSGPFLTSVLGRKAGEREFWQVLRDPDTPLQQGIADYRPKDGETIELRLVGW ------------------------------------------------------ >EPHRIN TYPE-B RECEPTOR 4; SWP:P54760; PDB:2BBAA; HHHHHEETLLNTKLETADLKWVTFPQVDGQWEELSGLDEEQHSVRTYEVCDVQRAPGQAH -------------------------------------------------1---------- WLRTGWVPRRGAVHVYATLRFTMLECLSLPRAGRSCKETFTVFYYESDADTATALTPAWM -------------------------2---------2------------------------ ENPYIKVDTVAAEHLTRKRPGAEATGKVNVKTLRLGPLSKAGFYLAFQDQGACMALLSLH ----------------------------------------------------1------- LFYKK ----- >Methylamine dehydrogenase; SWP:P29894; PDB:2BBKH; DEPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSF ------------------------------------------------------------ IAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTL ------------------------------------------------------------ LFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGT -----------------------------1--------------1--------------- PEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEA ------------------------------------------------------------ ERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH ------------------------------------------------------------ EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG ------------------------------------------------------- >Methylamine dehydrogenase; SWP:P22619; PDB:2BBKL; TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATASVASCYNPTDG ----------------1-----2------3-4-------5-------------2------ QSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPIV ---------56-------4-1--------------------6-----------3------ GKAS ---- >THROMBOSPONDIN-RELATED AN; SWP:P16893; PDB:2BBXA; GSASCGVWDEWSPCSVTCGKGTRSRKREILHEGCTSEIQEQCEEERCPP ----1--------2---3---------------1-------2----3-- >HLA class II histocompati; SWP:Q5SNZ7; PDB:2BC4A; LQNHTFLHTVYCQDGSPSVGLSEAYDEDQLFFFDFSQNTRVPRLPEFADWAQEQGDAPAI -----------1------------------------------------------------ LFDKEFCEWMIQQIGPKLDGKIPVSRGFPIAEVFTLKPLEFGKPNTLVCFVSNLFPPMLT ------1-----------------------------------------2----------- VNWQHHSVPVEGFGPTFVSAVDGLSFQAFSYLNFTPEPSDIFSCIVTHEIDRYTAIAYWV -------------------------------------------2---------------- PRNALPSD -------- >HLA class II histocompati; SWP:P28068; PDB:2BC4B; FVAHVESTCLLDDAGTPKDFTYCISFNKDLLTCWDPEENKMAPCEFGVLNSLANVLSQHL --------1-------------2---------2--------------------------- NQKDTLMQRLRNGLQNCATHTQPFWGSLTNRTRPPSVQVAKTTPFNTREPVMLACYVWGF ----------------1-------------------------------------3----- YPAEVTITWRKNGKLVMPHSSAHKTAQPNGDWTYQTLSHLALTPSYGDTYTCVVEHIGAP ---------------------------------------------------3-------- EPILRDWTPGL ----------- >CHOLESTEROL ESTERASE; SWP:P30122; PDB:2BCE; AKLGSVYTEGGFVEGVNKKLSLFGDSVDIFKGIPFAAAPKALEKPERHPGWQGTLKAKSF ------------------------------------------------------------ KKRCLQATLTQDSTYGNEDCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGLSNYLYDG ---1---------------1---------------------------------------- EEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQ ------------------------------------------------------------ ITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVGLCPWAIQQDPLFWAKRIAEKVGCP ----------------------------------------------------------2- VDDTSKMAGCLKITDPRALTLAYKLPLGSTEYPKLHYLSFVPVIDGDFIPDDPVNLYANA ---------2-------------------------------------------------- ADVDYIAGTNDMDGHLFVGMDVPAINSNKQDVTEEDFYKLVSGLTVTKGLRGAQATYEVY ------------------------------------------------------------ TEPWAQDSSQETRKKTMVDLETDILFLIPTKIAVAQHKSHAKSANTYTYLFSQPSRMPIY ------------------------------------------------------------ PKWMGADHADDLQYVFGKPFATPLGYRAQDRTVSKAMIAYWTNFARTGDPNTGHSTVPAN ------------------------------------------------------------ WDPYTLEDDNYLEINKQMDSNSMKLHLRTNYLQFWTQTYQALPTVTPVVIGF ---------------------------------------------------- >BETA-2-MICROGLOBULIN; SWP:P05534; PDB:2BCKA; GSHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYW ------------------------------------------------------------ DEETGKVKAHSQTDRENLRIALRYYNQSEAGSHTLQMMFGCDVGSDGRFLRGYHQYAYDG ----------------------------------------1------------------- KDYIALKEDLRSWTAADMAAQITKRKWEAAHVAEQQRAYLEGTCVDGLRRYLENGKETLQ -------------------------------------------1---------------- RTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGT ----------------------2------------------------------------- FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPGSGGGLNDIF ------------------2--------------------------- >SMALL INDUCIBLE CYTOKINE ; SWP:NA; PDB:2BDNH; EVQLQQSGAELVKAGASVKLSCPASGLNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKF ---------------------1-------------------------------------- DPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARGVFGFFDYWGQGTTLTVSSAKT -----------------------------------1------------------------ TAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYT -----------------------2------------------------------------ LSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIVPR ------------------2------------------ >MEXICAIN; SWP:P84346; PDB:2BDZA; YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCERRS ---------------------1---------------------------------2---- HGCDGGYQTTSLQYVVDNGVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEIS --1-------------------------------2------------------------- LIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTDHAVTAVGYGKTYLLLKNSWGPN --------------------------------3--------------------------- WGEKGYIRIKRASGRSKGTCGVYTSSFFPIKG -------------------3------------ >CBP21; SWP:O83009; PDB:2BEMA; HGYVESPASRAYQCKLQLNTQCGSVQYEPQSVEGLKGFPQAGPADGHIASADKSTFFELD -------------1-------1-------------------------------------- QQTPTRWNKLNLKTGPNSFTWKLTARHSTTSWRYFITKPNWDASQPLTRASFDLTPFCQF ---------------------------------------------------------2-- NDGGAIPAAQVTHQCNIPADRSGSHVILAVWDIADTANAFYQAIDVNLSK --------------2----------------------------------- >EXTERIOR MEMBRANE GLYCOPR; SWP:P05884; PDB:2BF1A; HMELALNVTESFDAWENTVTEQAIEDVWQLFETSIKPCVKLSPLCIGAGHCNTSIIQESC -------------------------------------1------2-----2--------1 FRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTYIY ---3---------4-----------4-------3-------------------------- WHGRDNRTIISLNKYYNLTMKCRGAGWCWFGGNWKDAIKEMKQTIVKHPRYTGTNNTDKI ---------------------5-----5-------------------------------- NLTAPRGGDPEVTFMWTNCRGEFLYCKMNWFLNWVEDRDVTNQRPKERHRRNYVPCHIRQ ------------------6------7-----------------------------7---- IINTWHKVGKNVYLPPREGDLTCNSTVTSLIANIDWTDGNQTNITMSAEVAELYRLELGD ----------------------6------------------------------------- YKLV ---- >VINORINE SYNTHASE; SWP:Q70PR7; PDB:2BGHA; QMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHL ---------------------1-------------------------------------- KQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLP -------------------------1---------------------------------- SAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRGET ------------------------------------------------------------ EIVLPNFDLAARHFPPVDNTPSPELVPDENVVMKRFVFDKEKIGALRAQASKNFSRVQLV ------------------------------------------------------------ VAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEWDK ------------------------------------------------------------ DFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYELEPQELLSFTSWCRLGFYDLDFGWGKP ------------------------------------------------------------ LSACTTTFPKRNAALLMDTRSGDGVEAWLPMAEDEMAMLPVELLSLVDSDFSK ----------------------------------------------------- >ACETYLCHOLINE-BINDING PRO; SWP:NA; PDB:2BJ0A; QIRWTLLNQITGESDVIPLSNNTPLNVSLNFKLMNIVEADTEKDQVEVVLWTQASWKVPY ------------------------------------------------------------ YSSLLSSSSLDQVSLPVSKMWTPDLSFYNAIAAPELLSADRVVVSKDGSVIYVPSQRVRF ------------------------------------------------------------ TCDLINVDTEPGATCRIKVGSWTHDNKQFALITGEEGVVNIAEYFDSPKFDLLSATQSLN -1------------1--------------------------------------------- RKKYSCCENMYDDIEITFAFRKK -----22---------------- >ORGANIC HYDROPEROXIDE RES; SWP:P80242; PDB:2BJOA; ALFTAKVTARGGRAGHITSDDGVLDFDIVMPNAAAAGQTGTNPEQLFAAGYAACFGGALE -----------------------------------------------------1------ HVAKEQNIEIDSEIEGQVSLMKDESDGGFKIGVTLVVNTKDLDREKAQELVNAAHEFCPY ---------------------------------------------------------1-- SKATRGNVDVKLELK --------------- >PLASMEPSIN II; SWP:P46925; PDB:2BJUA; SSNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDS ----------------------------------------------1----1-------- SKSRTYEKDGTKVEMNYVSGTVSGFFSKDLVTVGNLSLPYKFIEVIDTNGFEPTYTASTF ------------------------------------------------------------ DGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEG ------------------------------------------------------------ PLTYEKLNHDLYWQITLDAHVGNIMLEKANCIVDSGTSAITVPTDFLNKMLQNLDVIKVP ------------------------------------------------------------ FLPFYVTLCNNSKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFPVPTFI --------2-----------------------------------2--------------- LGDPFMRKYFTVFDYDNHSVGIALAKKNL ----------------------------- >SULFITE:CYTOCHROME C OXID; SWP:Q9LA16; PDB:2BLFA; ADTVTLPFANGERPLVMYPGKRPLIGLTARPPQLETPFSVFDEGLITPNDAFFVRYHLAG ------------------------------------------------------------ IPLEIDPDAFRLEIKGKVGTPLSLSLQDLKNDFPASEVVAVNQCSGNSRGFVEPRVGGGQ ------------------------------------------------------------ LANGAMGNARWRGVPLKAVLEKAGVQAGAKQVTFGGLDGPVIPETPDFVKALSIDHATDG ------------------------------------------------------------ EVMLAYSMNGADLPWLNGYPLRLVVPGYYGTYWVKHLNEITVIDKEFDGFWMKTAYRIPD ------------------------------------------------------------ NACACTEPGKAPTATIPINRFDVRSFITNVENGASVKAGEVPLRGIAFDGGYGITQVSVS --1-1------------------------------------------------------- ADAGKSWTNATLDPGLGKYSFRGWKAVLPLTKGDHVLMCRATNARGETQPMQATWNPAGY ------------------------------------------------------------ MRNVVEATRVIAA ------------- >FAB FRAGMENT OF CATALYTIC; SWP:Q58EV6; PDB:2BMKA; DIELTQSPAIMAASPGEKVTITCSATSGVNYMHWFQQKPGTSPKLWIYSTSNLASAVPAR ----------------------1------------------------------------- FSGSGSGTSYSLTISRMEAEDAATYYCQQRSTYPFTFGGGTKLELKRADAAPTVSIFPPS --------------------------1--------------------------------- SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTL ------------2----------------------------------------------- TKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC ------------2-------------------- >TOXIN BMTX2; SWP:Q9NII5; PDB:2BMT; FTNVSCSASSQCWPVCKKLFGTYRGKCMNSKCRCYS -----1-----2---3----------1----2-3-- >T-CELL RECEPTOR ALPHA CHA; SWP:TCB_HUMAN; PDB:2BNUA; QEVTQIPAALSVPEGENLVLNCSFTDSAIYNLQWFRQDPGKGLTSLLLIQSSQREQTSGR ---------------------1-------------------------------------- LNASLDKSSGRSTLYIAASQPGDSATYLCAVRPTSGGSYIPTFGRGTSLIVHPYIQNPDP ----------------------------1------------------------------- AVYQLRRSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSN ---------------2-------------------------------------------- KSDFACANAFNNSIIPEDTFFPS -----2----------------- >T-cell receptor beta chai; SWP:TCB_HUMAN; PDB:2BNUB; GVTQTPKFQVLKTGQSMTLQCAQDMNHEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPN --------------------1--------------------------------------- GYNVSRSTTEDFPLRLLSAAPSQTSVYFCASSYVGNTGELFFGEGSRLTVLEDLKNVFPP ----------------------------1------------------------------- EVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPAL ---------------------2-------------------------------------- NDSRYALSSRLRVSATFWQDPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRA --------------------------2--------------------------------- D - >Endoglucanase E-2 [Precur; SWP:P26222; PDB:2BOGX; NDSPFYVNPNMSSAEWVRNNPNDPRTPVIRDRIASVPQGTWFAHHNPGQITGQVDALMSA ------------------------------------------------------------ AQAAGKIPILVVSNAPGRDCGAPSHSAYRSWIDEFAAGLKNRPAYIIVEPDLISLMSSCM -------------------1--------------------------------------1- QHVQQEVLETMAYAGKALKAGSSQARIYFDAGHSAWHSPAQMASWLQQADISNSAHGIAT ------------------------------------------------------------ NTSNYRWTADEVAYAKAVLSAIGNPSLRAVIDTSRNGNGPAGNEWCDPSGRAIGTPSTTN ---------------------------------------------2-------------- TGDPMIDAFLWIKLPGEADGCIAGAGQFVPQAAYEMAIAA --------------------2------------------- >Coagulation factor X; SWP:Q5JVE8; PDB:2BOKL; KLCSLDNGDCDQFCHENSVVCSCARGYTLADNGKACIPTGPYPCGKQTLE --1------2---1------2-3------------3-------------- >VERSATILE PEROXIDASE VPL2; SWP:O94753; PDB:2BOQA; ATCDDGRTTANAACCILFPILDDIQENLFDGAQCGEEVHESLRLTFHDAIGFSPTLGGGG --1----------21------------------3-------------------------- ADGSIIAFDTIETNFPANAGIDEIVSAQKPFVAKHNISAGDFIQFAGAVGVSNCPGGVRI -----------------------------------------------------3------ PFFLGRPDAVAASPDHLVPEPFDSVDSILARMGDAGFSPVEVVWLLASHSIAAADKVDPS ------------------------------------------------------------ IPGTPFDSTPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQT ------------------------------------------------------------ ACEWQSMVNNQPKIQNRFAATMSKMALLGQDKTKLIDCSDVIPTPPALVGAAHLPAGFSL -4-----------------------------------2---------------------- SDVEQACAATPFPALTADP ------4------------ >SHIGA-LIKE TOXIN IIE B SU; SWP:Q47644; PDB:2BOSA; ADCAKGKIEFSKYNEDNTFTVKVSGREYWTNRWNLQPLLQSAQLTGMTVTIISNTCSSGS --1----------------------------------------------------1---- GFAEVQFN -------- >EGF-LIKE MODULE CONTAININ; SWP:Q9UHX3; PDB:2BOUA; RGCARWCPQDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATSCGKFSDCWNTEG --1---2-----1-----2-3-----------------3-----4---5-----4----- SYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPG ---5-6--------------------6-----7------8-----7--------8-9--- WKPRHGIPNNQKDTVCE ---------------9- >DECTIN-1; SWP:Q6QLQ4; PDB:2BPDA; QSCLPNWIMHGKSCYLFSFSGNSWYGSKRHCSQLGAHLLKIDNSKEFEFIESQTSSHRIN --1----------1----------------2----------------------------- AFWIGLSRNQSEGPWFWEDGSAFFPNSFQVRNAVPQESLLHNCVWIHGSEVYNQICNTSS ------------------------------------------3------------3---- YSICEKE ---2--- >Tartrate-resistant acid p; SWP:P13686; PDB:2BQ8X; ATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQILGADFILSLGDNFYFTGVQDI ------------------------------------------------------------ NDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQIAYSKISKRWNFPSPFYRLHF ------------------------------------------------------------ KIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKLARTQLSWLKKQLAAAREDYVL -------------------1---------------------------------------- VAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGHDHNLQYLQDENGVGYVLSGAG -----------------1------------------------------------------ NFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSKEMTVTYIEASGKSLFKTRLPR ------------------------------------------------------------ RARP ---- >F17A-G ADHESIN; SWP:Q99003; PDB:2BSCA; AVSFIGSTENDVGPSLGSYSLPFVYTRNKIGYQNANVWHISKGFCVGLDGKVDLPVVGSL --------------------------------------------1--------------- DGQSIYGLTEEVGLLIWMGDTKYSRGTAMSGNSWENVFSGWCVGANTASTQGLSVRVTPV -----------------------------------------1------------------ ILKRNRYSVQKTSIGSIRMRPYNGSSAGSVQTTVNFSLNPFTLND --------------------------------------------- >RECEPTOR BINDING PROTEIN; SWP:NA; PDB:2BSED; VQLQESGGGLVQAGGSLRLSCTASRRTGSNWCMGWFRQLAGKEPELVVALNFDYDMTYYA --------------------1--------------------------------------- DSVKGRFTVSRDSGKNTVYLQMNSLKPEDTAIYYCAARSGGFSSNRELYDGWGQGTQVTV ----------------------------------1------------------------- SS -- >MITOCHONDRIAL IMPORT INNE; SWP:Q9Y5J7; PDB:2BSKA; QFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMTQRISMRFQEYHI ---------------1---2---------------2---1-------------------- QQNEALAAKAGLL ------------- >Mitochondrial import inne; SWP:P62072; PDB:2BSKB; LEVEADYNRTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERGKKLTELSQDE ------------1---2----------------2---1--------------------- >PURINE NUCLEOSIDE PHOSPHO; SWP:Q8T9Z7; PDB:2BSXA; MDNLLRHLKISKEQITPVVLVVGDPGRVDKIKVVCDSYVDLAYNREYKSVECHYKGQKFL ------------------------------------------------------------ CVSHGVGSAGCAVCFEELCQNGAKVIIRAGSCGSLQPDLIKRGDICICNAAVREDRVSHL ---------------------------------------------1-1------------ LIHGDFPAVGDFDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAV ------------------------------------------------------------ VEMELATLMVIGTLRKVKTGGILIVDGCPFKWDELVPHQLENMIKIALGACAKLATKYAL ------------------------------------------------------------ E - >DEOXYURIDINE 5'-TRIPHOSPH; SWP:P03195; PDB:2BSYA; CPHIRYAFQNDKLLLQQASVGRLTLVNKTTILLRPMKTTTVDLGLYARPPEGHGLMLWGS 1----------------------------------------------------------- TSRPVTSHVGIIDPGYTGELRLILQNQRRYNSTLRPSELKIHLAAFRYATPQMGPINHPQ ------------------------------------------------------------ YPGDVGLDVSLPKDLALFPHQTVSVTLTVPPPSIPHHRPTIFGRSGLAMQGILVKPCRWR ------------------------------------------------------------ RGGVDVSLTNFSDQTVFLNKYRRFCQLVYLHKHHLTSFYSPHSDAGVLGPRSLFRWASCT ----------------------------------------------------------1- FEEVPSLAM --------- >Trypsin inhibitor 3; SWP:P10293; PDB:2BTCI; RVCPKILMECKKDSDCLAECICLEHGYCG --1------2-----3---1-2-----3- >MICRONEMAL PROTEIN 1; SWP:O00834; PDB:2BVBA; KTEIHGDSTKATLEEGQQLTLTFISTKLDVAVGSCHSLVANFLDGFLKFQTGSNSAFDVV ----------------------------------1------------------------- EVEEPAGPAVLTIGLGHKGRLAVVLDYTRLNAALGSAAYVVEDSGCSSSEEVSFQGVGSG ---------------------------------------------1-------------- ATLVVTTLGESPTAVSA ----------------- >BETA-2-MICROGLOBULIN; SWP:P18465; PDB:2BVPA; GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYW ------------------------------------------------------------ DGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHNQYAYDG ----------------------------------------1------------------- KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQ -------------------------------------------1---------------- RADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRT ----------------------2------------------------------------- FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW ------------------2--------------- >ENDOGLUCANASE; SWP:O33897; PDB:2BW8A; TVELCGRWDARDVAGGRYRVINNVWGAETAQCIEVGLETGNFTITRADHDNGNNVAAYPA ----1--------------------------1---------------------------- IYFGCHWGACTSNSGLPRRVQELSDVRTSWTLTPITTGRWNAAYDIWFSPVTNSGNGYSG ----2----2-------------------------------------------------- GAELMIWLNWNGGVMPGGSRVATVELAGATWEVWYADWDWNYIAYRRTTPTTSVSELDLK ------------------------------------------------------------ AFIDDAVARGYIRPEWYLHAVETGFELWEGGAGLRSADFSVTVQKL ---------------------------------------------- >ANGIOGENIN; SWP:P21570; PDB:2BWKA; DSRYTKFLTQHHDAKPKGRDDRYCERMMKRRSLTSPCKDVNTFIHGNKSNIKAICGANGS -----------------------1------------2-----------------3----- PYRENLRMSKSPFQVTTCKHTGGSPRPPCQYRASAGFRHVVIACENGLPVHFDESFFS -----------------1----------2--------------3-------------- >AMINE OXIDASE [FLAVIN-CON; SWP:P21397; PDB:2BXRA; HMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGGRTYTIRNEHVDYVDVGGAYVG ------------------------------------------------------------ PTQNRILRLSKELGIETYKVNVSERLVQYVKGKTYPFRGWNPIAYLDYNNLWRTIDNMGK ------------------------------------------------------------ EIPTDAPWEAQHADKWDKMTMKELIDKICWTKTARRFAYLFVNINVTSEPHEVSALWFLW ------------------------------------------------------------ YVKQCGGTTRIFSVGQERKFVGGSGQVSERIMDLLGDQVKLNHPVTHVDQSSDNIIIETL ------------------------------------------------------------ NHEHYECKYVINAIPPTLTAKIHFRPELPAERNQLIQRLPMGAVIKCMMYYKEAFWKKKD ------------------------------------------------------------ YCGCMIIEDEDAPISITLDDTKPDGSLPAIMGFILARKADRLAKLHKEIRKKKICELYAK -1-1-------------------------------------------------------- VLGSQEALHPVHYEEKNWCEEQYSGGCYTAYFPPGIMTQYGRVIRQPVGRIFFAGTETAT ------------------------------------------------------------ KWSGYMEGAVEAGERAAREVLNGLG ------------------------- >SOLUBLE ACETYLCHOLINE REC; SWP:Q8WSF8; PDB:2BYNA; LHSQANLMRLKSDLFNRSPMYPGPTKDDPLTVTLGFTLQDIVKADSSTNEVDLVYYEQQR ------------------------------------------------------------ WKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIP ------------------------------------------------------------ AQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSA -------1------------1--------------------------------------- TQTRQVQHYSCCPEPYIDVNLVVKFRERR ----------22----------------- >WINDBEUTEL PROTEIN; SWP:O44342; PDB:2C0GA; CTGCVDLDELSFEKTVERFPYSVVKFDIASPYGEKHEAFTAFSKSAHKATKDLLIATVGV 1--1-------------------------------------------------------- KDYGELENKALGDRYKVDDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSANTPLY ------------------------------------------------------------ IGRDGCIKEFNEVLKNYANIPDAEQLKLIEKLQAKQEQLTDPEQQQNARAYLIYMRKIHE ------------------------------------------------------------ VGYDFLEEETKRLLRLKAGKVTEAKKEELLRKLNILEVFRVHKVTKTA ------------------------------------------------ >MEMBRANE COPPER AMINE OXI; SWP:Q16853; PDB:2C10A; CQLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRG 1----------------------------------------------------------- SPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEY ------------------------------------------------------------ LDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGA ---------------------22------------------------------------- GFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGT ------------------------------------------------------------ GGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQG ------------------------------------------------------------ ERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFL -----------------------------------------------3------------ LESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNDYVWDT -------------3---------------------------------------------- VFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLEN ------------------------------------------------------------ WVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKW ------------------------------------------------------------ GHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPT ------------------------------------------------------------ VDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSF ------------------------------------------------------------ YSADSIYFRGDQDAGACEVNPLACLPQAAACAPDLPAFSHGGFSH ----------------4------4------1-------------- >BIOTIN BINDING PROTEIN A; SWP:NA; PDB:2C1SA; RKCELQGLWRNELGSNMTISALDVAGTFSGSYQTAVTATNKQILVSPLKGAQQPPGTKGQ --1--------------------------------------------------------- QPTFGFTVQWQFADSTTVFVGQCFVDRRGKEMLEMAWLLREEVPSRKDTWKATRVGTNVF ----------------------1------------------------------------- TRV --- >SENSOR HISTIDINE KINASE; SWP:Q9WZV7; PDB:2C2AA; MENVTESKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEF ------------------------------------------------------------ LEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNV --------------------------------------1--------------------- LFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVED -------1---------------------------------------------------- NGIGIPDHAKDRIFEQFYRVDTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR ------------------------------------------------------------ A - >GLYCOPROTEIN D HSV-1; SWP:Q69091; PDB:2C36A; PVLDQLTDPPGVRRVYHIQAGLPDPFQPPSLPITVYYAVLERACRSVLLNAPSEAPQIVR -------------------------------------------1---------------- GASEDVRKQPYNLTIAWFRMGGNCAIPITVMEYTECSYNKSLGACPIRTQPRWNYYDSFS -----------------------2-----------3--------3--------------- AVSEDNLGFLMHAPAFETAGTYLRLVKINDWTEITQFILEHRAKGSCKYALPLRIPPSAC ----------------------------------------------1------------2 LSPQAYQQGVTVDSIGMLPRFIPENQRTVAVYSLKIAGWHGPKAPYTSTLLPPELAPEDP ------------------------------------------------------------ EDSALLEDPVGTVAPQIPPNWHIPSIQDAATPYC ---------------------------------- >PPIASE; SWP:Q9Y7F6; PDB:2C3BA; SMSQVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRI -------------------------------------------1---------------- IPNFMIQGGDSRKHDKKGILSMAQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEAL ------------------------------------------------------------ GSSSGSVRSNTRPKIVNCGEL -----------------1--- >BARNASE MCOEETI FUSION; SWP:P00648; PDB:2C4BA; VINTFDGVADYLQTYHKLPDNYITKSEAQALGWVASKGNLADVAPGKSIGGDIFSNREGK ------------------------------------------------------------ LPGKSGRTWREADINYTSGFRNSDRILYSSDWLIYKTTDAYQTFTKIRSSSMGVCPKILK ------------------------------------------------------1----- KCRRDSDCLAGCVCGPNGFCGS -2-----3---1-2-----3-- >AVIDIN; SWP:NA; PDB:2C4IA; TQPTFGFTVNWKFSESTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGINI -----------------------1------------------------------------ FTRLKCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVTATSNEIKESPLHGTQNTIGS -----1------------------------------------------------------ TTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGINIFTRLSARKCSLTGKWT -------2--------------------------------------------2------- NDLGSNMTIGAVNSRGEFTGTYITAVTATSNEIKESPLHGTQNTINKRTQPTFGFTVNWK ------------------------------------------------------------ FS -- >Tyrosine-protein kinase r; SWP:P30530; PDB:2C5DC; ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQ ----------------------1------------------------------------- DDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAAN -----------------------1------------------------------------ TPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGHGPQRSLHVPGLNKTSSFSCEAHNAKGV ------2--------------------------------------------2-------- TTSRTATITVLP ------------ >CTP SYNTHASE; SWP:NA; PDB:2C5MA; SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDATKDNNLTTGKIY ------------------------------------------------------------ QYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPEPQVCVIELGGTVGDIESMPFI ------------------------------------------------------------ EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSN ---------------------------------------------------------1-- PLDTSVKEKISMFCHVEPEQVICVHDVSSIYRVPLLLEEQGVVDYFLRRLDL ----------------------1----------------------------- >DUFFY RECEPTOR, ALPHA FOR; SWP:P22545; PDB:2C6JA; KCNDKRKRGERDWDCPAEKDICISDRRYQLCMKELTNLITFLKLNLKRKLMYDAAVEGDL -1------------2------2--------1----------------------------- LLKKNNYQYNKEFCKDIRWGLGDFGDIIMGTNMEGVENNLRSIFGTDEKAKQDRKQWWNE -------------3---------------------------------------------- SKEHIWRAMMFSLRSRLKEKFVWICKKDVPQIYRWIREWGRDYMSELPKEQGKLNEKCAS ------------------------3--------------------------------4-- KLYYNNMAICMLPLCHDACKSYDQWITRKKKQWDVLSTKFSSVKKTNIATAYDILKQELN ---------5----4---6----------------------------------------- GFKEATFENEINKRDNLYNHLCPCVV ---------------------6-5-- >ANGIOTENSIN-CONVERTING EN; SWP:P12821; PDB:2C6NA; LDPGLQPGNFSADEAGAQLFAQSYNSSAEQVLFQSVAASWAHDTNITAENARRQEEAALL ------------------------------------------------------------ SQEFAEAWGQKAKELYEPIWQNFTDPQLRRIIGAVRTLGSANLPLAKRQQYNALLSNMSR ------------------------------------------------------------ IYSTAKVCLPNKTATCWSLDPDLTNILASSRSYAMLLFAWEGWHNAAGIPLKPLYEDFTA ------------------------------------------------------------ LSNEAYKQDGFTDTGAYWRSWYNSPTFEDDLEHLYQQLEPLYLNLHAFVRRALHRRYGDR ------------------------------------------------------------ YINLRGPIPAHLLGDMWAQSWENIYDMVVPFPDKPNLDVTSTMLQQGWNATHMFRVAEEF ------------------------------------------------------------ FTSLELSPMPPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQCTRVTMDQLSTVH -----------------------------1-----------------1------------ HEMGHIQYYLQYKDLPVSLRRGANPGFHEAIGDVLALSVSTPEHLHKIGLLDRVTNDTES ------------------------------------------------------------ DINYLLKMALEKIAFLPFGYLVDQWRWGVFSGRTPPSRYNFDWWYLRTKYQGICPPVTRN ------------------------------------------------------------ ETHFDAGAKFHVPNVTPYIRYFVSFVLQFQFHEALCKEAGYEGPLHQCDIYRSTKAGAKL -----------------------------------2-----------2------------ RKVLQAGSSRPWQEVLKDMVGLDALDAQPLLKYFQPVTQWLQEQNQQNGEVLGWPEYQWH ------------------------------------------------------------ PPLPDNYPEGID ------------ >GMP REDUCTASE 2; SWP:Q9P2T1; PDB:2C6QA; SLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLC -----------------------------------------------------------1 KFSLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICL --------------------------1--------------------------------- DVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTT ------------------------------------------------------------ RKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGH ------------------------------------------------------------ SESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGDVEHTIRDI ------------------------------------------------------------ LGGIRSTCTYVGAAKLKELSRRTTFIRV ---------------------------- >CLEC1B PROTEIN; SWP:Q9P126; PDB:2C6UA; SPCDTNWRYYGDSCYGFFRHNLTWEESKQYCTDMNATLLKIDNRNIVEYIKARTHLIRWV --1----------1----------------2----------------------------- GLSRQKSNEVWKWEDGSVISENMFEFLEDGKGNMNCAYFHNGKMHPTFCENKHYLMCERK -----------------------------------3------------3-------2--- AG -- >RECEPTOR-TYPE TYROSINE-PR; SWP:Q15262; PDB:2C7SA; MPAIRVADLLQHINLMKTSDSYGFKEEYESFFEGQSASWDVAKKDQNRAKNRYGNIIAYD ------------------------------------------------------------ HSRVILQPVDPSSDYINANYIDGYQRPSHYIATQGPVHETVYDFWRMIWQEQSACIVMVT ------------------------------------------------------------ NLVEVGRVKCYKYWPDDTEVYGDFKVTCVEMEPLAEYVVRTFTLERRGYNEIREVKQFHF ------------------------------------------------------------ TGWPDHGVPYHATGLLSFIRRVKLSNPPSAGPIVVHCSAGAGRTGCYIVIDIMLDMAERE ------------------------------------------------------------ GVVDIYNCVKALRSRRINMVQTEEQYIFIHDAILEACLCGETAIPVCEF --------------------------------------1-------1-- >VASCULAR ENDOTHELIAL GROW; SWP:Q8TEV2; PDB:2C7WA; KVVSWIDVYTRATCQPREVVVPLTVELMGTVAKQLVPSCVTVQRCGGCCPDDGLECVPTG -------------1------------------------------2---3------1---- QHQVRMQILMIRYPSSQLGEMSLEEHSQCECRPKKK ----------------------------2-3----- >3-KETOACYL-COA THIOLASE 2; SWP:Q56WD9; PDB:2C7YA; DSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEV ------------------------------------------------------------ GDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFY ----------------------------------------1------------------- DIGIGAGLESMTTNPKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAAT ----------------------1------------------------------------- AAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAG ------------------------------------------------------------ NSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAG ------------------------------------------------------------ LELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHE ------------------------------------------------------------ MKRRGKDCRFGVVSMCIGTGMGAAAVFERGD ------------------------------- >CYTOCHROME C-L; SWP:P14774; PDB:2C8SA; SQGKEGGRDTPAVKKFLETGENLYIDDKSCLRNGESLFATSCSGCHGHLAEGKLGPGLND -----------------------------1------------------------------ NYWTYPSNTTDVGLFATIFGGANGMMGPHNENLTPDEMLQTIAWIRHLYTGPKQDAVWLN ------------------------------------------------------------ DEQKKAYTPYKQGEVIPKDAKGQCKPLDE -----------------------1----- >RECEPTOR-TYPE TYROSINE-PR; SWP:P28827; PDB:2C9AA; ETFSGGCLFDEPYSTCGYSQSEGDDFNWEQVNTLTKPTSDPWPSGSFLVNASGRPEGQRA ------1--------1-------------------------------------------- HLLLPQLKENDTHCIDFHYFVSSKSNSPPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNR -------------2---------------------------------------------- AELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFA ---------------------------------------2-------------------- TFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCIR ---3-----------------------------------------------------3-- TEGGVGISNYAELVVK ---------------- >PESTICIDAL CRYSTAL PROTEI; SWP:P16480; PDB:2C9KA; GELSAYTIVVGTVLTGFGFTTPLGLALIGFGTLIPVLFPAQDQSNTWSDFITQTKNIIKK ------------------------------------------------------------ EIASTYISNANKILNRSFNVISTYHNHLKTWENNPNPQNTQDVRTQIQLVHYHFQNVIPE ------------------------------------------------------------ LVNSCPPNPSDCDYYNILVLSSYAQAANLHLTVLNQAVKFEAYLKNNTAIDYYPVLTKAI ----1------1------------------------------------------------ EDYTNYCVTTYKKGLNLIKTTPDSNLDGNINWNTYNTYRTKMTTAVLDLVALFPNYDVGK ------------------------------------------------------------ YPIGVQSELTREIYQVLNFEESPYKYYDFQYQEDSLTRRPHLFTWLDSLNFYEKAQTTPN ------------------------------------------------------------ NFFTSHYNMFHYTLDNISQKSSVFGNHNVTDKLKSLGLATNIYIFLLNVISLDNKYLNDY ------------------------------------------------------------ NNISKMDFFITNGTRLLEKELTAGSGQITYDVNKNIFGLPILKRREETLFPTYDNYSHIL ------------------------------------------------------------ SFIKSLSIPATYKTQVYTFAWTHSSVDPKNTIYTHLTTQIPAVKANSLGTASKVVQGPGH ------------------------------------------------------------ TGGDLIDFKDHFKITCQHSNFQQSYFIRIRYASNGSANTRAVINLSIPGVAELGMALNPT ------------------------------------------------------------ FSGTDYTNLKYKDFQYLEFSNEVKFAPNQNISLVFNRSDVYTNTTVLIDKIEFLPITR ---------------------------------------------------------- >ADENYLATE KINASE ISOENZYM; SWP:P54819; PDB:2C9YA; GIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLV ---------------------------1-------------------------------- SDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSL -----------------1------------------------------------------ LIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLQAYHTQT ------------------------------------------------------------ TPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATC -------------------------------------- >HUMAN PHOSPHATE BINDING P; SWP:NA; PDB:2CAPA; DIDGGGATLPEKLYLTPDVLTAGFAPYIGVGSGKGKIAFLENKYNQFGTDTTKNVHWAGS ------------------------------------------------------------ DSKLTATQLATYAADKEPGWGKLIQVPSVATSVAIPFRKAGANAVDLSVKELCGVFSGRI ----------------------------------------------------1------- ADWSGITGAGRSGPIQVVYRAESSGTTELFTRFLNAKCTTQPGTFAVTTVFANSYSLGLT -------------------------------------1---------------------- PLAGAVAAIGSDGVMAALNDTTVAEGRITYISPDFAAPTLAGLDDATKVARTGKGVVSGV ------------------------------------------------------------ AVEGKSPAAANVSAAISVVPLPAAADRGNPDVWVPVFGATTGGGVVAYPDSGYPILGFTD ------------------------------------------------------------ LIFSECYANATQTGQVRDFFTKHYGTSANDNAAIEANAFVPLPSNWKAAVRASFLTASNA -----2------------------------------------------------------ LSIGNTNVCNGKGRPE --------2------- >CANINE PARVOVIRUS EMPTY C; SWP:Q11213; PDB:2CAS; GVGISTGTFNNQTEFKFLENGWVEITANSSRLVHLNMPESENYRRVVVNNMDKTAVNGNM ------------------------------------------------------------ ALDDIHAQIVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSES ------------------------------------------------------------ ATQPPTKVYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDR ------------------------------------------------------------ TLIPSHTGTSGTPTNIYHGTDPDDVQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLT ------------------------------------------------------------ HTWQTNRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMGNTNYITEATIMRPAEV ------------------------------------------------------------ GYSAPYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGNPRYAFGRQHGQKTTTTGETPE ------------------------------------------------------------ RFTYIAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTA ------------------------------------------------------------ LNNVPPVYPNGQIWDKEFDTDLKPRLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASA ---------------------------------1---1---------------------- NMSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFNYVPSNIGGMKIVYEKS ------------------------------------------------------------ QLAPRKLY -------- >NEOCARZINOSTATIN; SWP:P0A3R9; PDB:2CBOA; AAPTATVTPSSGLSDGTVVKVAGAGLQAGTAYWVAQWARVDTGVWAYNPADNSSVTADAN ------------------------------------------------------------ GSASTSLTVRRSFEGFLFDGTRWGTVDCTTAACQVGLSDAAGNGPEGVAISFNHH ---------------------------1----1---------------------- >CUCUMBER BASIC PROTEIN; SWP:P00303; PDB:2CBP; AVYVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKV ---------------------------------------------------1-------- YTSGRDQIKLPKGQSYFICNFPGHCQSGMKIAVNAL ------------------------1----------- >NEOCARZINOSTATIN; SWP:P0A3R9; PDB:2CBQA; APTATVTPSSGLSDGTVVKVAGAGLQAGTAYWVYQRAAVDTGVHASNPADLSSVTADANG ------------------------------------------------------------ SASTSLTVRRSFEGFLFDGTRWGTVDCTTAACQVGLSDAAGNGPEGVAISF --------------------------1----1------------------- >HELIX POMATIA AGGLUTININ; SWP:Q2F1K8; PDB:2CCVA; RVQSGKIDCGDDAGWAKVPSDDPGRDNTRELAKNITFASPYCRPPVVLLSITQLDVEQSQ --------1--------------------------------------------------- NLRVIARLYSVSPSGFKASCYTWHNTKV -------------------1-------- >AZURIN II; SWP:P56275; PDB:2CCWA; AQCEATVESNDAMQYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVA --1----------------------1---------------------------------- TDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWAM ------------------------------------------------------------ MKGTLKLGS --------- >GLUCOSE DEHYDROGENASE; SWP:O93715; PDB:2CDCA; MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLGKDFLVLGHE ------------------------------------------------------------ AIGVVEESYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREW ------------------------------------------------------------ WYDDPKYLVKIPKSIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVV ----------------------------------------------1------1------ GTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKF ------------------------------------------------------------ DVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVN ------------------------------------------------------------ GQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE ----------------------------------------------------------- >TCR 5E; SWP:NA; PDB:2CDFA; NQVEQSPQFLSIQEGENLTVYCNSSSVFSSLQWYRQEPGEGPVLLVTVVTGGEVKKLKRL ---------------------1-------------------------------------- TFQFGDARKDSSLHITAAQPGDTGLYLCAGADRGSTLGRLYFGRGTQLTVWPDIQNPDPA ---------------------------1-------------------------------- VYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNK --------------2--------------------------------------------- SDFACANAFNN ----2------ >TCR 5E; SWP:NA; PDB:2CDFB; EADIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGMELHLIHYSYGVNSTEKGDL ----------------------1------------------------------------- SSESTVSRIRTEHFPLTLESARPSHTSQYLCASSEFRDGNEKLFFGSGTQLSVLEDLNKV ------------------------------1----------------------------- FPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQ ------------------------2----------------------------------- PALNDSRYALSSRLRVSATFWQDPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAW -----------------------------2------------------------------ GRAD ---- >TCR 5E; SWP:NA; PDB:2CDGA; QALSIQEGENATMNCSYKTSINNLQWYRQNSGRGLVHLILIRSNEREKHSGRLRVTLDTS --------------1--------------------------------------------- KKSSSLLITASRAADTASYFCAPFDRGSTLGRLYFGRGTQLTVWPDIQNPDPAVYQLRDS --------------------1--------------------------------------- KSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACAN -------2-------------------------------------------------2-- AFNN ---- >CARDIOTOXIN CTX I; SWP:P60304; PDB:2CDX; LKCNKLIPIASKTCPAGKNLCYKMFMMSDLTIPVKRGCIDVCPKNSLLVKYVCCNTDRCN --1----------2------1----------------2---3----------34----4- >CYTOCHROME C6; SWP:Q93VA3; PDB:2CE0A; LDIQRGATLFNRACAACHDTGGNIIQPGATLFTKDLERNGVDTEEEIYRVTYFGKGRMPG ------------------------------------------------------------ FGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQ ----1-----1------------------------ >FIBRONECTIN; SWP:Q5MD86; PDB:2CG7A; AEETCFDKYTGNTYRVGDTYERPKDSMIWDCTCIGAGRGRISCTIANRCHEGGQSYKIGD ----1-------------------------2-1---------2-----3----------- TWRRPHETGGYMLECVCLGNGKGEWTCKPI --------------4-3---------4--- >RHAMNULOKINASE; SWP:Q8X899; PDB:2CGLA; TFRNCVAVDLGASSGRVLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRL ------------------------------------------------------------ GLNKVCAAGIAIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRDSRTNGLAQAQQQLGKRDI -----1------------------------------------------------------ YQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLPDYFSYRLTGKNWEYTNATTTQLV ------------------------------------------------------------ NINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTASAVIAS ------------------------------------1----------------------- PLNGSRAAYLSSGTWSLGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIGLWLLQRVL ------------------------------------------------------------ QERQINDLPALIAATQALPACRFIINPNDDRFINPDECSEIQAACREAQPIPESDAELAR ------------------------------------------------------------ CIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADACGIRVIAGPVEAS ------------------------------------------------------------ TLGNIGIQLTLDELNNVDDFRQVVSTTANLTTFTPNPDSEIAHYVALIHS -------------------------------------------------- >33 KDA EARLY PROTEIN; SWP:P03228; PDB:2CH8A; VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDI ------------------------------------------------------------ HRSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFS ------------------------------------------------------------ VLTVTCTVNAFPHPHVQWLMPGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAH -----1-------------------------------------------1---------- GVYVSGYL -------- >CYSTATIN F; SWP:NA; PDB:2CH9A; TCSQDLNSRVKPGFPKTIKTNDPGVLQAARYSVEKFNNCTNDMFLFKESRITRALVQIVK ------------------------------------------------------------ GLKYMLEVEIGRTTCKKNQHLRLDDCDFQTNHTLKQTLSCYSEVWVVPWLQHFEVPVLRC --------------1----------1-------------2-------------------2 HHHHHH ------ >CHLOROPEROXIDASE; SWP:P04963; PDB:2CIWA; EPGSGIGYPYDNNTLPYVAPGPTDSRAPCPALNALANHGYIPHDGRAISRETLQNAFLNH ------------------------------------------------------------ MGIANSVIELALTNAFVVCEYVTGSDCGDSLVNLTLLAEPHAFEHDHSFSRKDYKQGVAN ------------------1-------1--------------------------------- SNDFIDNRNFDAETFQTSLDVVAGKTHFDYADMNEIRLQRESLSNELDFPGWFTESKPIQ ------------------------------------------------------------ NVESGFIFALVSDFNLPDNDENPLVRIDWWKYWFTNESFPYHLGWHPPSPAREIEFVTSA ------------------------------------------------------------ SSAVLAASVTSTPSSLPSGAIGPGAEAVPLSFASTMTPFLLATNAPYYAQDPTLGPND ---------------------------------------------------------- >INVERTASE INHIBITOR; SWP:O49908; PDB:2CJ4A; NNLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHS ------------------------------------------------------------ NPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKG ------------1----------------------------------------1------ SKSPFSALNIAVHELSDVGRAIVRNLL --------------------------- >SECRETED CHITINASE; SWP:Q8CK55; PDB:2CJLA; FVVSEAQFDQMFPSRNSFYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANVGHETGG ------------------------------------------------------------ LVYVVEQNTANYPHYCDASQPYGCPAGNDKYYGRGPVQLSWNFNYKAAGDALGIDLLNNP ---------------1-------1------------------------------------ DLVQNDSAVAWKTGLWYWNTQTGPGTMTPHDAMVNGAGFGETIRSINGSLECDGGNPGQV ---------------------------------------------------2-------- QSRIDNYERFTQLLGVEPGGNLSC -----------------------2 >ULILYSIN; SWP:Q8TL28; PDB:2CKIA; REIVKIPVVVHVVWNEEEENISDAQIQSQIDILNKDFRKLNSDVSQVPSVWSNLIADLGI ------------------------------------------------------------ EFFLATKDPNGNQTTGITRTQTSVTFFTTSDEVKFASSGGEDAWPADRYLNIWVCHVLKS ------------------------------------------------------------ EIGQDILGYAQFPGGPAETDGVVIVDAAFGTTGTALPPFDKGRTATHEIGHWLNLYHIWG ------------------------------------------------------------ DELRFEDPCSRSDEVDDTPNQADPNFGAPSYPHVSCSNGPNGDFNYDYVDDKCVFTQGQA --------1--------------------------1------------------------ TRVNACLDGPRSSFLA ---------------- >BASIC FIBROBLAST GROWTH F; SWP:P16092; PDB:2CKNA; PTLPEQAQPWGVPVEVESLLVHPGDLLQLRCRLRDDVQSINWLRDGVQLVESNRTRITGE ------------------------------1----------------------------- EVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNVS ----------------1------------------ >PUTATIVE LAMINARINASE; SWP:Q874E3; PDB:2CL2A; ATYHLEDNWVGSAFLSTFTHEAIADPTHGRVNYVDQATALAKNLTYASGDTLILRADHTT ------------------------------------------------------------ TLSPSGPGRNSVRIRSIKTYTTHVAVFDVRHMPQGCGTWPAAWETDEGDWPNGGEVDIIE -----------------------------------1------------------------ GVNDQSPNAMTLHTGANCAMPASRTMTGHATNNNCDVNTDGNTGCGVQAPTANSYGPSFN -----------------2----------------3---------3--------------- ANGGGWYAMERTNSFIKVWFFPRNAGNVPNDIASGPATINTDNWGTPTAFFPNTNCDIGS -------------------------------------------------------2---- HFDANNIIINLTFCGDWAGQASIFNGAGCPGSCVDYVNNNPSAFANAYWDIASVRVYQ -------------4--------------1---4------------------------- >DPS-LIKE PROTEIN; SWP:P95855; PDB:2CLBA; QEPKVVGVEILEKSGLDIKKLVDKLVKATAAEFTTYYYYTILRHLTGEGEGLKEIAEDAR ------------------------------------------------------------ LEDRLHFELTQRIYELGGGLPRDIRQLADISACSDAYLPENWKDPKEILKVLLEAEQCAI --------------------------------1------------------------1-- RTWKEVCDTYGKDPRTYDLAQRILQEEIEHEAWFLELLYGRPSGH --------------------------------------------- >HYPOTHETICAL 13.2 KDA PRO; SWP:P20220; PDB:2CMXA; TLNSYKAEIYKILEKKGELTLEDILAQFEISVPSAYNIQRALKAICERHPDECEVQYKNR ---------------------------------------------1------1------- KTTFKWIK -------- >SPIKE GLYCOPROTEIN; SWP:P04883; PDB:2CMZA; KFTIVFPHNQKGNWKNVPSNYHYCPSSSDLNWHNDLIGTAIQVKMPKSHKAIQADGWMCH -----------------------1----------------------------------2- ASKWVTTCDFRWYGPKYITQSIRSFTPSVEQCKESIEQTKQGTWLNPGFPPQSCGYATVT -------3-----------------------2---------------------3------ DAEAVIVQVTPHHVLVDEYTGEWVDSQFINGKCSNYICPTVHNSTTWHSDYKVKGLCDSN --------------------------------4----4------------------5--- LISMDITFFSEDGELSSLGKEGTGFRSNYFAYETGGKACKMQYCKHWGVRLPSGVWFEMA --------------------------------------6----5---------------- DKDLFAAARFPECPEGSSISAPSQTSVDVSLIQDVERILDYSLCQETWSKIRAGLPISPV ------------6------------------------------1---------------- DLSYLAPKNPGTGPAFTIINGTLKYFETRYIRVDIAAPILSRMVGMISGTTTERELWDDW ------------------------------------------------------------ APYEDVEIGPNGVLRTSSGYKFPLYMIGHGMLDSDLHLSSKAQVFEHPH ------------------------------------------------- >Putative fimbriae assembl; SWP:Q8ZRK3; PDB:2CO6B; LNSATKLFSVKLGATRVIYHAGTGATLSVSNPQNYPILVQSSVKAADKSSPAPFLVMPPL ------------------------------------------------------------ FRLEANQQSQLRIVRTGGDMPTDRETLQWVCIKAVPPENEPGATLDLNLSINACDKLIFR ------------------------------1----------------------1------ PDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVGGKPITGLEYVPPFADKTL ------------------------------------------------------------ NMPGSHGDIEWRVITDFGGESHPFHYVL ---------------------------- >Putative fimbriae assembl; SWP:Q8ZRK3; PDB:2CO7B; ATKLFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKSSPAPFLVMPPLFR ------------------------------------------------------------ LEANQQSQLRIVRTGGDMPTDRETLQWVCIKAVPPETLDLNLSINACDKLIFRPDAVKGT ----------------------------1-----------------1------------- PEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVGGKPITGLEYVPPFADKTLNHGDIEW ------------------------------------------------------------ RVITDFGGESHPFHYVLK ------------------ >BRANCHED CHAIN AMINOTRANS; SWP:P54687; PDB:2COIA; VGTFKAKDLIVTPATILKEKPDPNLVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLH ------------------------------------------------------------ PGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLPVFDKEELLECIQ ------------------------------------------------------------ QLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFNPVSLWAN ------------------------------------------------------------ PKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYW ------------------------------------------------------------ INEDGEEELATPPLDGIILPGVTRRCILDLAHQWGEFKVSERYLTMDDLTTALEGNRVRE ------------------------------------------------------------ MFGSGTACVVCPVSDILYKGETIHIPTMENGPKLASRILSKLTDIQYGREERDWTIVL -------1--1----------------------------------------------- >NEW ANTIGEN RECEPTOR VARI; SWP:Q8JJ25; PDB:2COQA; ARVDQTPRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVD ---------------------1------2------------------------------- EGSNSASLTIRDLRVEDSGTYKCKAYRRCAFNTGVGYKEGAGTVLTVK ----------------------1-----2------------------- >Beta-1,3-xylanase; SWP:Q8RS40; PDB:2COVD; PPENCQDDFNFNYVSDQEIEVYHVDKGWSAGWNYVCLNDYCLPGNKSNGAFRKTFNAVLG ----1------------------------------2----2------------------- QDYKLTFKVEDRYGQGQQILDRNITFTTQVCN ------------------------------1- >BASIC FIBROBLAST GROWTH F; SWP:P11362; PDB:2CR3A; GSSGSSGVEVESFLVHPGDLLQLRCRLRDDVQSINWLRDGVQLAESNRTRITGEEVEVQD ------------------------1----------------------------------- SVPADSGLYACVTSSPSGSDTTYFSVNVSDALPSGPSSG ----------1---------------------------- >TOPOISOMERASE V; SWP:Q977W1; PDB:2CSBA; LVYDAEFVGSEREFEEERETFLKGVKAYDGVLATRYLERSSSAKNDEELLELHQNFILLT ------------------------------------------------------------ GSYACSIDPTEDRYQNVIVRGVNFDERVQRLSTGGSPARYAIVYRRGWRAIAKALDIDEE ------------------------------------------------------------ DVPAIEVRAVKRNPLQPALYRILVRYGRVDLPVTVDEVPPEAGEFERLIERYDVPIDEKE ------------------------------------------------------------ ERILEILRENPWTPHDEIARRLGLSVSEVEGEKDPESSGIYSLWSRVVVNIEYDERTAKR ------------------------------------------------------------ HVKRRDRLLEELYEHLEELSERYLRHPLTRRWIVEHKRDIRRYLEQRIVECALKLQDRYG ------------------------------------------------------------ IREDVALCLARAFDGSISIATTPYRTLKDVCPDLTLEEAKSVNRTLATLIDEHGLSPDAA -------1----------------------1----------------------------- DELIEHFESIAGILATDLEEIERYEEGRLSEEAYRAAVEIQLAELTKKEGVGRKTAERLL ------------------------------------------------------------ RAFGNPERVKQLAREFEIEKLASVEGVGERVLRSLVPGYASLISIRGIDRERAERLLKKY ------------------------------------------------------------ GGYSKVREAGVEELREDGLTDAQIRELKGLK ------------------------------- >ALPHA-COBRATOXIN; SWP:P25671; PDB:2CTX; IRCFITPDITSKDCPNGHVCYTKTWCDAFCSIRGKRVDLGCAATCPTVKTGVDIQCCSTD --1----------2-----1-----3---3----------2---4----------45--- NCNPFPTRKRP -5--------- >PROBABLE THIOL-DISULFIDE ; SWP:Q5SKQ0; PDB:2CVBA; LQYPELPLESPLIDAELPDPRGGRYRLSQFHEPLLAVVFCNHCPYVKGSIGELVALAERY ------------------------------------------1----------------- RGKVAFVGINANDYEKYPEDAPEKAAFAEEHGIFFPYLLDETQEVAKAYRALRTPEVFLF ------------------------------------------------------------ DERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGEEPPLKEAPAIGCTIKWRPGNEP -------------------------------------------------1---------- EVRIG ----- >STEROL CARRIER PROTEIN 2; SWP:Q5SL92; PDB:2CX7A; ELFTEAWAQAYCRKLNESEAYRKAASTWEGSLALAVRPDPKAGFPKGVAVVLDLWHGACR -----------1----------------------------------------------1- GAKAVEGEAEADFVIEADLATWQEVLEGRLEPLSALRGLLELKKGTIAALAPYAQAAQEL ------------------------------------------------------------ VKVAREVA -------- >CUTINASE-LIKE PROTEIN; SWP:Q874E9; PDB:2CZQA; ATSSACPQYVLINTRGTGEPQGQSAGFRTMNSQITAALSGGTIYNTVYTADFSQNSAAGT -----1------------------------------------------------------ ADIIRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNPDHK -----------------1------------------------------------------ SGLTCNVDSNGGTTTRNVNGLSVAYQGSVPSGWVSKTLDVCAYGDGVCDTAHGFGINAQH ----------------------------------------2------2------------ LSYPSDQGVQTMGYKFAVNKLGGSA ------------------------- >PROSTAGLANDIN-H2 D-ISOMER; SWP:O09114; PDB:2CZTA; FQQDKFLGRWYSAGLASNSSWFREKKAVLYMAKTVVAPSTEGGLNLTSTFLRKNCETKIM ------------------------------------------------------1----- VLQPAGAPGHYTYSSPHSGSIHSVSVVEANYDEYALLFSRGTKGPGQDFRMATLYSRTQT ------------------------------------------------------------ LKDELKEKFTTFSKAQGLTEEDIVFLPQPDKCIQE -------------------------------1--- >NEOCULIN ACIDIC SUBUNIT; SWP:Q6F495; PDB:2D04A; DSVLLSGQTLYAGHSLTSGSYTLTIQNNCNLVKYQHGRQIWASDTDGQGSQCRLTLRSDG ----------------------------1----------------------1-------- NLIIYDDNNMVVWGSDCWGNNGTYALVLQQDGLFVIYGPVLWPLGLNGCRS --------------------------------------------------- >Curculin [Precursor]; SWP:P19667; PDB:2D04B; DNVLLSGQTLHADHSLQAGAYTLTIQNKCNLVKYQNGRQIWASNTDRRGSGCRLTLLSDG ----------------------------1----------------------1-------- NLVIYDHNNNDVWGSACWGDNGKYALVLQKDGRFVIYGPVLWSLGPNGCRR --------------------------------------------------- >METHANOL DEHYDROGENASE LA; SWP:Q4AE26; PDB:2D0VA; NDKLIELSNSNENWVMPGKNYDSNNYSTSTQINVDNVKQLKHAWSFSTGELHGHEGAPLV ------------------------------------------------------------ IGDVMYVHSSFPNKTFALDLNDPGHILWQHSPKQDPAARSVACCDLVNRGLAYWPGDDKT ------------------------------------------11---------------- PSLIIKTQLDGHLVALNAKTGEEFWKVENGDIKVGQTLTQAPYVVHDLAIVGSSGAELGV ------------------------------------------------------------ RGHVTAYNVRTGEQAWRYYATGPDAEIGLADDFNSANPHYGQKGLGTATWEGDAWKIGGG ------------------------------------------------------------ TNWGWYAYDPAANLIYYGSGNPAPWNETMRPGDNKWTMTITARDADTGKMKFGYQKTPHD ------------------------------------------------------------ EWDFAGVNVIMLSEQTDKTGKKRKLLTHPDRNGIVYTLDRENGDLISADKLDDTVNVFKT ------------------------------------------------------------ VDLKTGLPVRDPEYGTRMDHKGTDICPSAMGYHNQGHDSYDPQKQLFFMGINHICMDWEP -------------------------2----------------------------2----- FMLPYRAGQFFVGATLWMYPGPKGDRQNYLGLGQIKAYNAITNEYKWQHMERFSVWGGTL ------------------------------------------------------------ ATAGNLVFYGTLDGFLKARNSDTGELVWKHKLPSGVIGYPMTYEHKGVQYIAVMSGVGGW ------------------------------------------------------------ PGVGLVFDLQDPTAGLGAVGAFKNLQNYTQMGGSLEVFSLDGKNPYDDVNVGEYEKG --------------------------------------------------------- >CYTOCHROME CL; SWP:Q4AE24; PDB:2D0WA; AQEVFRNTVTGEALDVEGQAPKEGRDTPAVKQFMQTGVDPYVEVAGCLPKGEEIYLESCS ----------------------------------------------1------------- GCHGHIGEGKVGPGLNDSYWTYPKNTTDKGLFETIFGGANGMMGPHGQDLELDNMLKLIA ------------------------------------------------------------ WIRHIQKDDVADADWLSDEQKKNFKPFDIKAWEATGKAAAEKAQCKIS --------------------------------------------1--- >ACID PHOSPHATASE; SWP:Q2A5P7; PDB:2D1GA; NSKPNDYGTLQKLFNNANTLKTTTPIKHVVIIFQENNSFDRYFGMYPNAKNPEGEPKFVA ------------------------------------------------------------ KENTPNVNGLTKQLLENNPNTKNPYRLDRNFQPCSQNHEYHQEISSFNGGLMNKFVEHGG ---------------------------------1-------------------------- HDNDTYKQNCDGQVMGYYDGNTVTALWNYAQNFALNDNTFGTTFGPSTPGALNLVAGANG ---------1-------------------------------------------------- PAMSPSGNLENIENNYIIDDPNPYYDDCSYGTSKSGDTNTAVAKITDGYNIGHYLTQKGI ---------------------------2-------------------------------- TWGWFQGGFKPTSYSGKTAICDAMSTNKFGVKSRDYIPHHEPFNYWKETSNPHHLAPSDD --------------------2--------------------------------------- KYIGSNDQANHQYDISEFWKALDQNNMPAVSYLKAPGYQDGHGGYSNPLDEQEWLVNTIN ------------------------------------------------------------ RIQQSKDWDSTAIIIIYDDSDGDYDHVYSPKSQFSDIKGRQGYGPRLPMLVISPYAKANY ------------------------------------------------------------ VDHSLLNQASVLKFIEYNWGIGSVSKYSNDKYSNNILNMFDFNKEQKTLKLILDPKTGLV ------------------------------------------------------------ M - >109aa long hypothetical t; SWP:Q96ZE4; PDB:2D1HA; KEKLESKKDEIRCCYKITDTDVAVLLKVEIEKPITSEELADIFKLSKTTVENSLKKLIEL -------------1---------------------------------------------- GLVVRTKTPKYYYSISSNILEKIRNDLLNCAKRELAAT -----------------------------1-------- >ENDO-1,4-BETA-D-XYLANASE; SWP:Q7SI98; PDB:2D1ZA; AESTLGAAAAQSGRYFGTAIASGKLGDSAYTTIASREFNMVTAENEMKIDATEPQRGQFN ------------------------------------------------------------ FSAGDRVYNWAVQNGKQVRGHTLAWHSQQPGWMQSLSGSTLRQAMIDHINGVMGHYKGKI ------------------------------------------------------------ AQWDVVSHAFSDDGSGGRRDSNLQRTGNDWIEVAFRTARAADPAAKLCYNDYNIENWTWA -----------------------------------------------1------------ KTQGVYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAALGVDVAITELDIQ --------------------1--------------------------------------- GASSSTYAAVTNDCLAVSRCLGITVWGVRDTDSWRSGDTPLLFNGDGSKKAAYTAVLNAL -------------2-----2---------------------------------------- NGGGQIKGVGSGRCLDVPNASTTDGTQVQLYDCHSATNQQWTYTDAGELRVYGDKCLDAA -------------3------------------3----------------------4---- GTGNGTKVQIYSCWGGDNQKWRLNSDGSIVGVQSGLCLDAVGGGTANGTLIQLYSCSNGS ------------4-----------------------5------------------5---- NQRWTRT ------- >GIANT HEMOGLOBIN, A1(B) G; SWP:Q7M419; PDB:2D2MA; VCNRLEQILVKTQWAQSYGEAENRAAFSRDLFSELFNIQGSSRALFSGVGVDDMNSAAFT -1---------------------------------------------------------- AHCLRVTGALNRLISQLDQQATINADLAHLAGQHASRNLDASNFAAMGQAVMSVVPTHLD ------------------------------------------------------------ CFNQHAWGECYERIASGISG ---------1---------- >Extracellular giant hemog; SWP:Q7M413; PDB:2D2MB; DCTSLNRLLVKRQWAEAYGEGTNRELLGNRIWEDLFANMPDARGLFSRVNGNDIDSSEFQ -1---------------------------------------------------------- AHSLRVLGGLDMCVASLDDVPVLNALLARLNSQHDSRGIPAAGYPAFVASAISAVRATVG ------------------------------------------------------------ ARSFDNDAWNSCMNQIVSGISG -----------1---------- >Extracellular giant hemog; SWP:Q7M418; PDB:2D2MC; SCCSSEDRANVMHNWDAAWSAAYSDRRVALAQAVFASLFSRDAAAQGLFSGVSADNPDSA --1--------------------------------------------------------- DFRAHCVRVVNGLDVAINMLNDPAVLNEQLAHLSAQHQARAGVAAAHFDVMAEAFAEVMP ------------------------------------------------------------ QVSSCFSSDSWNRCFARIANGISAGL -------------1------------ >Extracellular giant hemog; SWP:Q5KSB7; PDB:2D2MD; ECCSRGDAEVVISEWDQVFNAAMAGSSESAVGVAIFDAFFASSGVSPSMFPGGGDSNNPE --1--------------------------------------------------------- FLAQVSRVVSGADIAINSLTNRATCDSLLSHLNAQHRAISGVTGAAVTHLSQAISSVVAQ ------------------------------------------------------------ VLPSAHIDAWEYCMAYIAAGIGAGL ------------1------------ >2-DEOXY-SCYLLO-INOSOSE SY; SWP:Q9S5E2; PDB:2D2XA; TTKQICFADRCFNFAFGEHVLESVESYIPRDEFDQYIMISDSGVPDSIVHYAAEYFGKLA -----1----1------------------------------------------------- PVHILRFQGGEEYKTLSTVTNLQERAIALGANRRTAIVAVGGGLTGNVAGVAAGMMFRGI ------------------------------------------------------------ ALIHVPTTFLAASDSVLSIKQAVNLTSGKNLVGFYYPPRFVFADTRILSESPPRQVKAGM ------------------------------------------------------------ CELVKNMLILKEFTEDDLNSANVYSPKQLETFINFCISAKMSVLSEDIYEKKKGLIFEYG ------------------------------------------------------------ HTIGHAIELAEQGGITHGEAIAVGMIYAAKIANRMNLMPEHDVSAHYWLLNKIGALQDIP ------------------------------------------------------------ LKSDPDSIFHYLIHEDNLGMILLSGVGKPAMYNQTLLTPVRKTLIKEVIREGL ----------------------------------------------------- >FICOLIN-1; SWP:O00602; PDB:2D39A; EFPRNCKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDW -----1---------------------------1-------------------------- AAYKQGFGSQLGEFWLGNDNIHALTAQGSSELRVDLVDFEGNHQFAKYKSFKVADEAEKY ------------------------------------------------------------ KLVLGAFVGGSAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKFQGAWWYADCHASNLNGLY -------------------------------------2------------2--------- LMGANGINWSAAKGYKYSYKVSEMKVRPA ----------------------------- >WNT INHIBITORY FACTOR-1; SWP:Q9Y5W5; PDB:2D3JA; GSHMLDQQEESLYLWIDAHQARVLIGFEEDILIVSEGKMAPFTHDFRKAQQRMPAIPVNI ------------------------------------------------------------ HSMNFTWQAAGQAEYFYEFLSLRSLDKGIMADPTVNVPLLGTVPHKASVVQVGFPCLGKQ -------------------------------------------------------1---- DGVAAFEVDVIVMNSEGNTILQTPQNAIFFKTCLQAE --------------------------------1---- >leukocyte immunoglobulin-; SWP:Q6PI73; PDB:2D3VA; LSKATLWAEPGSVISRGNSVTIRCQGTLEAQEYRLVKEGSPEPWDTQNPLEPKNKARFSI -----------------------1------------------------------------ PSTEHHAGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPTLSAVTLQCGSRLRFDRFILTE -----------1----------------------------------2------------- EKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWLRCYGSRRHILQVWSEPSDLLEIPV ----------------------------------2---------------------- >INTERLEUKIN-4; SWP:P05112; PDB:2D48A; HKCDITLQEIIKDLNSLTEQKTLCTELTVTDIFAASKNTTEKETFCRAATVLRQFYSHHE --1--------------------2---------------------3-------------- KDTRCLGATAQQFHRHKQLIRFLKRLDRNLWGLAGLNSCPVKEANQSTLENFLERLKTIM ----2---------------------------------3--------------------- REKYSKCSS ------1-- >ASABF; SWP:P90683; PDB:2D56A; AVDFSSCARMDVPGLSKVAQGLCISSCKFQNCGTGHCEKRGGRPTCVCDRCGR ------1---------------2---3----4----1--------2-3--4-- >GLYCININ A3B4 SUBUNIT; SWP:NA; PDB:2D5FA; NECQLNNLNALEPDHRVESEGGLIETWNSQHPELQCAGVTVSKRTLNRNGLHLPSYSPYP --1--------------------------------1------------------------ QMIIVVQGKGAIGFAFPGCPETFEKPQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDE ------------------2----------------------------------------- PVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQEGGSVLSGFSKHFLAQSFNTN ------------------------------------------------------------ EDTAEKLRSPDDERKQIVTVEGGLSVISPKWGVEENICTMKLHENIARPSRADFYNPKAG -------------------------------------2---------------------- RISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNQGNA ------------------------------------------------------------ VFDGELRRGQLLVVPQNFVVAEQGGEQGLEYVVFKTHHNAVSSYIKDVFRAIPSEVLSNS ------------------------------------------------------------ YNLGQSQVRQLKYQGNSGPLVNP ----------------------- >PEPTIDE ABC TRANSPORTER, ; SWP:Q5SHU6; PDB:2D5WA; MGPQDNSLVIGASQEPRVLAGDFLRVISNQAIKSEIEQYLFAPFIGFNADSQNFPVLATE ------------------------------------------------------------ VPTLENGRLRVTDIGGGKKRLEMDITIRPDAKWSDGRPITTEDVAFYFEVGKAKGMPVLN ------------------------------------------------------------ PDFWERVNVRIKDARNFTLIFEPAYYYDTYGPINTYAPKHIMGPEWERVKAAARGLDPDK ------------------------------------------------------------ DAEKLNELYRNFFLKFATPQALNRGAMVYSGPFKLKRWVPGNSIEMERNPNFPIKPEGGE ------------------------------------------------------------ SKYVQKVVYRFIQNTNSLLVAVIGGSIDATSSVSLTFDQGRSPQLVRRAPGRFDIWFVPG ------------------------------------------------------------ AIWEHIDINKFENCQVVKDLGLNDKRTRQAILHALNREGLVKAFFDGLQPVAHTWIAPVN -------------1---------------------------------------------- PLFNPNVKKYEFDLKKAEALLAEMGWRKGPDGILQRTVNGRTVRFEIEYVTTAGNVVRER ------------------------------------------------------------ TQQFFAEDLKKIGIAVKINNAPSAVVFADEFIQRASECKWTGMFEFAWVSNLQEDGSLFQ -------------------------------------1---------------------- YKNLNTGAIMVPTKENNYQGQNIGGWRNDEFDRLTSQAVLEFDPERRKQLFWRAQEIWAE ------------------------------------------------------------ ELPALPLYFRANPYVVRKGLVNYVASAYSGGYGYPGWNAWEIGWESRGAVKKWDQAKYAL ------------------------------------------------------------ ST -- >Translation initiation fa; SWP:Q8U3I5; PDB:2D74B; IDYYDYEKLLEKAYQELPENVKHHKSRFEVPGALVTIEGNKTIIENFKDIADALNRDPQH ------------------------------------------------------------ LLKFLLREIATAGTLEGRRVVLQGRFTPYLIANKLKKYIKEYVICPVCGSPDTKIIKRDR -----------------------------------------------1------------ FHFLKCEACGAETPIQH --------1-------- >POLYPEPTIDE N-ACETYLGALAC; SWP:Q86SR1; PDB:2D7IA; GQKLKDWHDKEAIRRDAQRVGNGEQGRPYPMTDAERVDQAYRENGFNIYVSDKISLNRSL ------------------------------------------------------------ PDIRHPNCNSKRYLETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFS -------1---------------------------------------------------- DREHLKKPLEDYMALFPSVRILRTKKREGLIRTRMLGASVATGDVITFLDSHCEANVNWL ------------------------------------------------------------ PPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKAD ------------------------------------------------------------ PSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSR ------------------------------------------------2--------1-- VGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVAVQKKLR ------------------------------------------------------------ SSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVGTGLCADTKHGALGSPLRLEG ----2--------------------------------------3---------------- CVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFDAISHTSPVTLYDCHSMKGNQLW 3----------------------------------4--------------4--------- KYRKDKTLYHPVSGSCMDCSESDHRIFMNTCNPSSLTQQWLFEHTNSTVLEKFNRN ---------------5--------------5------------------------- >anti polyhydroxybutyrate ; SWP:NA; PDB:2D7TH; QVQLVQSGAEVKKPGASVKVSCKASGYTFTGNYMHWVRQAPGQGLEYMGWINPKSGDTNY ---------------------1-------------------------------------- AQKFQGRVTMTRDTSISTVYMEVRRLRSDDTAVYYCATGWWGMDVWGQGTLVTVSS -----------------------------------1-------------------- >anti polyhydroxybutyrate ; SWP:NA; PDB:2D7TL; DIVMTQSPSSLSASVGDRVTITCRASQNINNYLHWYQHEPGKAPKLLIYAASNLQGGVTS ----------------------1------------------------------------- RFSGSGSGTDFTLTISTLQPEDFATYYCLQTHAYPLTFGGGTKVDIKRAA ---------------------------1---------------------- >PHB DEPOLYMERASE; SWP:Q4W9V8; PDB:2D81A; TALPAFNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCM -------------------------------------------------1--------1- YNGYPSITTPTANMKSWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFD ------------------------------------------------------------ NSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYDGAGAALKWIYGSLNARN ----------------------------2----------2-------------------- TGTLSGSVLSFAQSGSYGANGMDTTGYLYVPQSCASGATVCSLHVALHGCLQSYSSIGSR ---------------------------------3------3--------4---------- FIQNTGYNKWADTNNMIILYPQAIPDYTIHAIWNGGVLSNPNGCWDWVGWYGSNADQIGG -------------------------------------------4---------------- VQMAAIVGQVKQIVSGFQ ------------------ >SIGNAL-REGULATORY PROTEIN; SWP:O00241; PDB:2D9CA; GSSGSSGELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG -----------------------------1------------------------------ HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR -----------------------------------1------------------------ AKPSAPVVSGSGPSSG ---------------- >Granulocyte colony-stimul; SWP:Q99062; PDB:2D9QB; CGHISVSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQES 1-------------------2-----1--------------------------------- IITLPHLNHTQAFLSCSLNWGNSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWE ---------------2-----------------------------3----------3--- PGPETHLPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQA ---------------------4---------5--------5------------------- ENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPQAGCLQLSWEPWQPGLHINQKCELRHKP ------------4----------------------6-----------------7------ QRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE ----------------------6-------------7---------------------- >CATHEPSIN B; SWP:P07688; PDB:2DCCA; LPESFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHSNVNVEVSAEDMLTC -------------1-----------2----------------1----------------3 CGGECGDGCNGGFPSGAWNFWTKKGLVSGGLYNSHVGCRPYSIPPCEHHVNGSRPPCTGE 4---4---2----------------------------5-------6----------6--- GDTPKCSKTCEPGYSPSYKEDKHFGCSSYSVANNEKEIMAEIYKNGPVEGAFSVYSDFLL -----3---5---------------7---------------------------------- YKSGVYQHVSGEIMGGHAIRILGWGVENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGI ------------------------------------------------------------ ESEIVAGMPCT ---------7- >TACHYSTATIN-B1; SWP:P0C1Z8; PDB:2DCVA; YVSCLFRGARCRVYSGRSCCFGYYCRRDFPGSIFGTCSRRNF ---1------2-------31----2-----------3----- >TACHYSTATIN-B2; SWP:P0C1Z9; PDB:2DCWA; YITCLFRGARCRVYSGRSCCFGYYCRRDFPGSIFGTCSRRNF ---1------2-------31----2-----------3----- >PSEUDECIN; SWP:Q8AVA3; PDB:2DDBA; NYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADRCTFAHSPPNTRTVGKLR -------------------------------------------1---------------- CGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCASA 2-------------------------------------------------------3--- KCSSSKYLYVCQYCPAGNIRGSIATPYKSGPPCADCPSACVNRLCTNPCNYNNDFSNCKS -1--------3--2------------------4--5---4----5---6--------7-- LAKKSKCQTEWIKKKCPASCFCHNKII ------8--------7---8-6----- >ADAM 17; SWP:P78536; PDB:2DDFA; PDPMKNTCKLLVVADHRFYRYMGRGEESTTTNYLIELIDRVDDIYRNTAWDNAGFKGYGI -------1---------------------------------------------------- QIEQIRILKSPQEVKPGEKHYNMAKSYPNEEKDAWDVKMLLEQFSFDIAEEASKVCLAHL -------------------------------------------------------1---- FTYQDFDMGTLGLAYGGSPHGGVCPKAYYSPVGKKNIYLNSGLTSTKNYGKTILTKEADL -----------------------2------------------------------------ VTTHELGHNFGAEHDPDGLAECAPNEDQGGKYVMYPIAVSGDHENNKMFSQCSKQSIYKT ---------------------3-----------------------------3-------- IESKAQECFQERS -------2----- >WAP, follistatin/kazal, i; SWP:Q7LDW0; PDB:2DDIA; EAEAEFTDACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDAC ---------1--------2---------------3-------2------------3---1 PVVDHHHHHH ---------- >If kappa light chain [Fra; SWP:A2NHM3; PDB:2DDQH; KVKLQESGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKY ---------------------1-------------------------------------- NEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCAPYGGYWGQGTTVTVSSAKTTAPS -----------------------------------1------------------------ VYPLAPVCGTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVT -----------------2------------------------------------------ VTSSTWPSQSITCNVAHPASSTKVDKKIEPR ------------2------------------ >REELIN; SWP:Q64FW1; PDB:2DDUA; LTLKPGYVLQFKLNIGCTSQFSSTAPVLLQYSHDAGMSWFLVKEGCFPASAGKGCEGNSR ---------------------------------------------1--------1----- ELSEPTVYYTGDFEEWTRITIAIPRSLASSKTRFRWIQEVPPFGLDGVYISEPCPSYCSG -----------------------------------------------------2---3-- HGDCISGVCFCDLGYTAAQGTCVSNTPNHSEMFDRFEGKLSPLWYKITGGQVGTGCGTLN ---2----3-4----------4---------------------------------5---- DGRSLYFNGLGKREARTVPLDTRNIRLVQFYIQIGSKTSGITCIKPRARNEGLVVQYSND ------------------------------------------5----------------- NGILWHLLRELDFMSFLEPQIISIDLPREAKTPATAFRWWQPQHGKHSAQWALDDVLISR ------------------------------------------------------------ L - >BETA-1,3-XYLANASE; SWP:NA; PDB:2DDXA; LDGVLVPESGILVSVGQDVDSVNDYASALGTIPAGVTNYVGIVNLDGLNSDADAGAGRNN ------------------------------------------------------------ IAELANAYPTSALVVGVSMNGEVDAVASGRYNANIDTLLNTLAGYDRPVYLRWAYEVDGP ------------------------------------------------------------ WNGHSPSGIVTSFQYVHDRIIALGHQAKISLVWQVASYCPTPGGQLDQWWPGSEYVDWVG --------------------------------------1--------------------- LSYFAPQDCNWDRVNEAAQFARSKGKPLFLNESTPQRYQVADLTYSADPAKGTNRQSKTS --------1--------------------------------------------------- QQLWDEWFAPYFQFMSDNSDIVKGFTYINADWDSQWRWAAPYNEGYWGDSRVQANALIKS ------------------------------------------------------------ NWQQEIAKGQYINHSETLFETLGY ------------------------ >Alpha-(1,6)-fucosyltransf; SWP:Q9BYC5; PDB:2DE0X; LGKDHEILRRRIENGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDLGHHERSIMTDL ------------------------------------------------------------ YYLSQTDGAGDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHV ------------------------------------1-------2-----3---3----- VYCFMIAYGTQRTLILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGEVKDKNVQ --2-----------------------------------1--------------------- VVELPIVDSLHPRPPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIE ------------------------------------------------------------ EATKKLGFKHPVIGVHVRRTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPS ------------------------------------------------------------ LLKEAKTKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVC ----------------------------------------------------4------4 RVAYEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVA ------------------------------------------------------------ GNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPE ---------------------------------------- >BETA-GLUCOSIDASE; SWP:Q1XH05; PDB:2DGAA; GPVFTKLKPWQIPKRDWFDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISD ------------------------------------------------------------ MTNGDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILPDGTGKVNQAGIDYYNKLINS ------------------------------------------------------------ LIDNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNE ------------------------------------------------------------ PHTYCCFSYGEGIHAPGRCSPGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNM ------------------1-----1----------------------------------- HGDSKIGMAFDVMGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRL ------------------------------------------------------------ PMFTKEEQEKLASSCDIMGLNYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTGSDGNDI ------------------------------------------------------------ GPITGTYWIYMYPKGLTDLLLIMKEKYGNPPVFITENGIADVEGDESMPDPLDDWKRLDY ------------------------------------------------------------ LQRHISAVKDAIDQGADVRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGNKRKLKKSAK ------------------------------------------------------------ WFSKFNSVPKP ----------- >CELL DIVISION PROTEIN FTS; SWP:O67077; PDB:2DI4A; TISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISIIKHIYDKKDLYNKILVLLGGRAAEE ------------------------------------------------------------ VFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAIRRTAVDTSPDLLREIDEEV ------------------------------------------------------------ KRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEFVEVFKLYGIELKDKCK ------------------------------------1-----------------1- >THIOREDOXIN DOMAIN-CONTAI; SWP:Q8NBS9; PDB:2DIZA; GSSGSSGTVLALTENNFDDTIAEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVK ------------------------------------------------------------ IAEVDCTAERNICSKYSVRGYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQAKDEL -----1------1-------------------------------------------- >NADP-dependent leukotrien; SWP:LTB4D_CAVPO; PDB:2DM6A; MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKRLKEG ------------------------------------------------------------ AVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALG ------------------------------------------------------------ TIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA ----------------1------------------------------------------- YLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICG --------------------------------1--------------------------- AISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHE ------------------------------------------------------------ HVTKGFENMPAAFIEMLNGANLGKAVVTA ----------------------------- >KIAA0640 PROTEIN; SWP:Q9UH65; PDB:2DN6A; GSSGSSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDLKDKKGDILLDENCCVE --------------------------------------------------------1--- SLPDKDGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLKLGSSGPSSG ---------------1--------------------------------------- >PROACTIVATOR POLYPEPTIDE; SWP:P07602; PDB:2DOBA; GSLPCDICKDVVTAAGDLKDNATEEEILVYLEKTCDWLPKPNSASCKEIVDSYLPVILDI ----1--2--------------------------3----------3-------------- IKGESRPGEVCSALNLCES ----------2-----1-- >probable N-succinyldiamin; SWP:Q5SLF1; PDB:2DOUA; VPEPSVFLVVDEAKRKARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKS --------------------------------------------------------1--- CTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPS 1----------------------------------------------------------- YFGAARVASLRTFLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEA ------------------------------------------------------------ LGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFAL ------------------------------------------------------------ GSEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV ------------------------------------------------------------ LSLLPPRATMYLWGRLPEGVDDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVRPLEE ------------------------------------------------------------ LLEAAKRIREAL ------------ >CHITINASE-3-LIKE PROTEIN ; SWP:Q6TMG6; PDB:2DPEA; YKLICYYTSWSQYREGDGSCFPDAIDPFLCTHVIYSFANISNNEIDTWEWNDVTLYDTLN ----1------------------------1------------------------------ TLKNRNPKLKTLLSVGGWNFGPERFSAIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLY ------------------------------------------------------------ PGRRDKRHLTTLVKEMKAEFIREAQAGTEQLLLSAAVSAGKIAIDRGYDIAQISRHLDFI ------------------------------------------------------------ SLLTYDFHGAWRQTVGHHSPLFAGNEDASSRFSNADYAVSYMLRLGAPANKLVMGIPTFG ------------------------------------------------------------ RSFTLASSKTDVGAPVSGPGVPGRFTKEKGILAYYEICDFLHGATTHRFRDQQVPYATKG -------------------------------------2---------------------- NQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDDFRGTFCGQNLTFPLTSAVKDVLAE -----------------------------------------2------------------ V - >SODIUM/CALCIUM EXCHANGER ; SWP:P23685; PDB:2DPKA; HGIPVSKIFFEQGTYQCLENCGTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTE ----------------1---1--------------------------------------- GTVVFKPGETQKEIRVGIIDDDIFEEDENFLVHLSNVKVSSESALACLGSPSTATVTIFD ------------------------------------------------------------ DDHA ---- >WATER-SOLUBLE CHLOROPHYLL; SWP:O04797; PDB:2DREA; NDEEPVKDTNGNPLKIETRYFIQPASDNNGGGLVPANVDLSHLCPLGIVRTSLPYQPGLP -------------------------------------------1---------------- VTISTPSSSEGNDVLTNTNIAITFDAPIWLCPSSKTWTVDSSSEEKYIITGGDPKSGESF ------------------------------1----------------------------- FRIEKYGNGKNTYKLVRYDNGEGKSVGSTKSLWGPALVLNDNAFPIKFREVD ---------------------------------------------------- >chimera of CD48 antigen a; SWP:P08921; PDB:2DRUA; FQDQSVPNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKD ------------------------------------------------------------ RVDLDKTNGALRIYNVSKEDRGDYYMRMLHETEDQWKITMEVYEMVSKPMIYWECSNATL ------------------------------------------------------1----- TCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNCP -2---------------------------------------2----------------1- >Insulin-like growth facto; SWP:P08833; PDB:2DSQG; EPCRIELYRVVESLAKASKFYLPNCNKNGFYHSRQCETSMEAGLCWCVYPWNGKRIPGSP --1---------------------1----------2--------2-3------------- EIRGDPNCQIYFN -------3----- >Insulin-like growth facto; SWP:P22692; PDB:2DSRG; GSCQSELHRALERLAASQSRTHEDLYIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVDR --1-----------------------------1----------2----------2-3--- KTGVKLPGGLEPKGELDCH -----------------3- >UPF0130 PROTEIN APE0816; SWP:Q9YDV3; PDB:2DVKA; DPGAEKVLARINRPSKIVSTSSCTGRITLIEGEAHWLRVAYKTHHPISRSEVERVLRRGF ------------------------------------------------------------ TNLWLKVTGPILHLRVEGWQCAKSLLEAARRNGFKHSGVISIAEDSRLVIEIMSSQSMSV --------------------1--------------------------------------- PLVMEGARIVGDDALDMLIEKANTILVESRIGLDTFSREVEELVEC ---------------------------------------------1 >PUTATIVE EXPORTED PROTEIN; SWP:Q7W0A0; PDB:2DVZA; AYPSKAIRVIVPFAPGGSTDIIARLVTQRSQELGQPVVENKGGAGGAIGASEAARAEPDG ------------------------------------------------------------ YTLSIATVSTAVNPACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEEL ---------------1-------------------------------------------- KKNPGKYSYGSSGTCGVLHLGESFKATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPS --------------1--------------------------------------------- SPQIQAGKLRAAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPDVVNKLRDA ------------------------------------------------------------ AVVALKDPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD ---------------------------------------------------- >432aa long hypothetical d; SWP:Q973K9; PDB:2E0IA; MDCIFIFRRDLRLEDNTGLNYALSECDRVIPVFIADPRQLINNPYKSEFAVSFMINSLLE --1----------------------1---------------------------------- LDDELRKKGSRLNVFFGEAEKVVSRFFNKVDAIYVNEDYTPFSISRDEKIRKVCEENGIE ------------------------------------------------------------ FKAYEDYLLTPKSLFHHRNFTSFYNEVSKVKVREPETMEGSFDVTDSSMNVDFLLTFKKI ------------------------------------------------------------ ESPLFRGGRREGLYLLHRNVDFRRRDYPAENNNYRLSPHLKFGTISMREAYYTQKGKEEF ------------------------------------------------------------ VRELYWRDFFTLLAYYNPHVFGHCYRREYDNISWENNESYFEAWKEGRTGYPIIDAGMRM ------------------------------------------------------------ LNSTGYINGRVRMLVAFFLVKVLFVDWRWGERYFATKLVDYDPAINNGNWQWIASTGVDY ------------------------------------------------------------ MFRVFNPWKQQEKFDPEAKFIKEWVEELKDVPPSIIHSIYKTKVPGYPSPIVNWLERVNY ------------------------------------------------------------ VKSEYKNV -------- >TK-SUBTILISIN; SWP:P58502; PDB:2E1PA; NTIRVIVSVDKAKFNPHEVLGIGGHIVYQFKLIPAVVVDVPANAVGKLKKMPGVEKVEFD ------------------------------------------------------------ HQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSITDGSVSVIQVAVLDTGVDYDHP ------------------------------------------------------------ DLAANIAWCVSTLRGKVSTKLRDCADQNGHGTHVIGTIAALNNDIGVVGVAPGVQIYSVR --------1--------------1------------------------------------ VLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPADDSY ------------------------------------------------------------ LYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSNDNIASFSNRQPEVSA ------------------------------------------------------------ PGVDILSTYPDDSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVR ------------------------------------------------------------ GILHITADDLGPTGWDADYGYGVVRAALAVQAALG ----------------------------------- >Metalloproteinase inhibit; SWP:P16368; PDB:2E2DC; CSCSPVHPQQAFCNADIVIRAKAVNKKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDQDI 1-2---------3----------------------------------------------- EFIYTAPAAAVCGVSLDIGGKKEYLIAGKAEGNGNMHITLCDFIVPWDTLSATQKKSLNH -----------1----------------------------2------------------- RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKRSDGSCAWYRG -----3-4----5----5-------6--------------------6-------4----- >HEXOKINASE; SWP:Q96Y14; PDB:2E2OA; MMIIVGVDAGGTKTKAVAYDCEGNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIAAKGEA --------------------1--------------------------------------- DVVGMGVAGLDSKFDWENFTPLASLIAPKVIIQHDGVIALFAETLGEPGVVVIAGTGSVV ------------------------------------------------------------ EGYNGKEFLRVGGRGWLLSDDGSAYWVGRKALRKVLKMMDGLENKTILYNKVLKTINVKD ------------------------------------------------------------ LDELVMWSYTSSCQIDLVASIAKAVDEAANEGDTVAMDILKQGAELLASQAVYLARKIGT ------------------------------------------------------------ NKVYLKGGMFRSNIYHKFFTLYLEKEGIISDLGKRSPEIGAVILAYKEVGCDIKKLISD --------------------------------------------------1-------- >PEROXIDASE; SWP:Q12575; PDB:2E3BA; SVTCPGGQSTSNSQCCVWFDVLDDLQTNFYQGSKCESPVRKILRIVFHDAIGFSPALTAA ---1----------21------------------3------------------------- GQFGGGGADGSIIAHSNIELAFPANGGLTDTIEALRAVGINHGVSFGDLIQFATAVGMSN ------------------------------------------------------------ CPGSPRLEFLTGRSNSSQPSPPSLIPGPGNTVTAILDRMGDAGFSPDEVVDLLAAHSLAS 3----------------------------------------------------------- QEGLNSAIFRSPLDSTPQVFDTQFYIETLLKGTTQPGPSLGFAEELSPFPGEFRMRSDAL ------------------------------------------------------------ LARDSRTACRWQSMTSSNEVMGQRYRAAMAKMSVLGFDRNALTDCSDVIPSAVSNNAAPV --------4-----------------------------------2--------------- IPGGLTVDDIEVSCPSEPFPEIATASGPLPSLAPAP -------------4---------------------- >METABOTROPIC GLUTAMATE RE; SWP:P31422; PDB:2E4UA; RREIKIEGDLVLGGLFPINEKGTGTEECGRINEDRGIQRLEAMLFAIDEINKDNYLLPGV ---------------------------1-------------------------------- KLGVHILDTCSRDTYALEQSLEFVRASLIPLLIAGVIGGSYSSVSIQVANLLRLFQIPQI ---------1-------------------------------------------------- SYASTSAKLSDKSRYDYFARTVPPDFYQAKAMAEILRFFNWTYVSTVASEGDYGETGIEA ------------------------------------------------------------ FEQEARLRNICIATAEKVGRSNIRKSYDSVIRELLQKPNARVVVLFMRSDDSRELIAAAN ----------2------------------------------------------------- RVNASFTWVASDGWGAQESIVKGSEHVAYGAITLELASHPVRQFDRYFQSLNPYNNHRNP ------------------------------------------------------------ WFRDFWEQKFQCSLQQVCDKHLAIDSSNYEQESKIMFVVNAVYAMAHALHKMQRTLCPQT -----------3-----3--------------------------------------4--- TKLCDAMKILDGKKLYKEYLLKIQFTAPFNPNKGADSIVKFDTFGDGMGRYNVFNLQQTG ---4-------------------------------------------------------- GKYSYLKVGHWAETLSLDVDSIHWSRNSVPTSQCSDPCAPNEMKNMQPGDVCCWICIPCE ---------------------------------5---6-------------25--6--7- PYEYLVDEFTCMDCGPGQWPTADLSGCYNLPE ----------7--8------------8----- >EBOLA VIRUS ENVELOPE GLYC; SWP:Q05320; PDB:2EBOA; GLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCAIEPHDWT --------------------------------------------1------1-------- KNITDKIDQIIHDF -------------- >136AA LONG HYPOTHETICAL T; SWP:Q974H8; PDB:2EC2A; MEYKSTRHAKYLCNYHFVWIPKYRRKVLTGEVAEYTKEVLRTIAEELGCEVLALEVMPDH ------------------------------------------------1----------- IHLFVNCPPRYAPSYLANYFKGKSARLILKKFQELKKSTNGKLWTRSYFVSTSGNVSSET ------1----------------------------------------------------- IKKYIEEQWA ---------- >ENDOGLUCANASE V; SWP:P43316; PDB:2ENG; ADGRSTRYWDCCKPSCGWAKKAPVNQPVFSCNANFQRITDFDAKSGCEPGGVAYSCADQT ----------12---3--------------4---------------2--------4---- PWAVNDDFALGFAATSIAGSNEAGWCCACYELTFTSGPVAGKKMVVQSTSTGSNHFDLNI -------------------------35-6------------------------------- PGGGVGIFDGCTPQFGGLPGQRYGGISSRNECDRFPDALKPGCYWRFDWFKNADNPSFSF ----------1--------------------7----------7----------------- RQVQCPAELVARTGCRRNDDGNFPAV ----6---------5----------- >HORSE MILK LYSOZYME; SWP:P11376; PDB:2EQL; KVFSKCELAHKLKAQEMDGFGGYSLANWVCMAEYESNFNTRAFNGKNANGSSDYGLFQLN -----1-----------------------2------------------------------ NKWWCKDNKRSSSNACNIMCSKLLDENIDDDISCAKRVVRDPKGMSAWKAWVKHCKDKDL ----3----------4---3-------------4--------------------2----- SEYLASCNL ------1-- >ODORANT BINDING PROTEIN; SWP:Q8T6S0; PDB:2ERBA; TPRRDAEYPPPELLEALKPLHDICLGKTGVTEEAIKKFSDEEIHEDEKLKCYMNCLFHEA -----------------------1--------------------------2---1----- KVVDDNGDVHLEKLHDSLPSSMHDIAMHMGKRCLYPEGETLCDKAFWLHKCWKQSDPKHY --------------------------------3--------2--------3--------- FLV --- >THROMBOSPONDIN-1; SWP:P07996; PDB:2ERFA; GGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFRIEDANLIPPVPDDKFQDLVDAVRT ------------------------------------------------------------ EKGFLLLASLRQMKKTRGTLLALERKDHSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVE ------------------------------------------------------------ EALLATGQWKSITLFVQEDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGV --------------------------1--------------------------------- NDNFQGVLQNVRFVFGTTPEDILRNKGCS ---------------------------1- >CIRCULIN B; SWP:P56879; PDB:2ERIA; CGESCVFIPCISTLLGCSCKNKVCYRNGVIP 1---2----3------1-2----3------- >MATING PHEROMONE ER-1; SWP:P10774; PDB:2ERL; DACEQAAIQCVESACESLCTEGEDRTGCYMYIYSNCPPYV --1------2----3---1--------3-------2---- >VASCULAR APOPTOSIS-INDUCI; SWP:Q9DGB9; PDB:2EROA; SNLTPEQQRYLNAKKYVKLFLVADYIMYLKYGRNLTAVRTRMYDIVNVITPIYHRMNIHV ------------------------------------------------------------ ALVGLEIWSNTDKIIVQSSADVTLDLFAKWRATDLLSRKSHDNAQLLTGINFNGPTAGLG ------------------------------------------------------------ YLGGICNTMYSAGIVQDHSKIHHLVAIAMAHEMGHNLGMDHDKDTCTCGTRPCVMAGALS -----1---------------------------------------2-3----3------- CEASFLFSDCSQKDHREFLIKNMPQCILKKPLKTDVVSPAVCGNYFVEVGEECDCGSPRT ---------2---------------1---------------4----------5-6----- CRDPCCDATTCKLRQGAQCAEGLCCDQCRFKGAGTECRAAKDECDMADVCTGRSAECTDR 6---75----4-------8----98--7--------a------b-----9------a--- FQRNGQPCKNNNGYCYNGKCPIMADQCIALFGPGATVSQDACFQFNREGNHYGYCRKEQN -------c------b----c------d--------------e------------f----- TKIACEPQDVKCGRLYCFPNSPENKNPCNIYYSPNDEDKGMVLPGTKCADRKACSNGQCV ----f------g----d----------e-------------------h-----g----h- DVTTPY ------ >INTERLEUKIN-15 RECEPTOR A; SWP:Q13261; PDB:2ERSA; ITCPPPMSVEHADIWVKSYSLYSRERYICNSGFKRKAGTSSLTECVLNKATNVAHWTTPS --1-------------------------2---------------1--------------- LKCIRD --2--- >SERINE PROTEASE INHIBITOR; SWP:Q95P16; PDB:2ERWA; NPCACFRNYVPVCGSDGKTYGNPCMLNCAAQTKVPGLKLVHEGRCQRSNVEQF ----1-------2----------1--------------------2-------- >BETA-2-MICROGLOBULIN; SWP:NA; PDB:2ESVE; GVTQFPSHSVIEKGQTVTLRCDPISGHDNLYWYRRVMGKEIKFLLHFVKESKQDESGMPN --------------------1--------------------------------------- NRFLAERTGGTYSTLKVQPAELEDSGVYFCASSQDRDTQYFGPGTRLTVLEDLKNVFPPE -----------------------------1------------------------------ VAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALN --------------------2--------------------------------------- DSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD -------------------------2---------------------------------- >OXALATE OXIDASE 1; SWP:P45850; PDB:2ET1A; TDPDPLQDFCVADLDGKAVSVNGHTCKPMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELD ---------1---------------1---------------------------------- VAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYS ------------------------------------------------------------ RVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLT ------------------------------------------------------------ KALRVEAGVVELLKSKFAGGS --------------------- >11S GLOBULIN BETA SUBUNIT; SWP:P13744; PDB:2EVXA; ACRLENLRAQDPVRRAEAEAGFTEVWDQDNDEFQCAGVNMIRHTIRPKGLLLPGFSNAPK -1--------------------------------1------------------------- LIFVAQGFGIRGIAIPGCAETYQTDLRFKDQHQKIRPFREGDLLVVPAGVSHWMYNRGQS -----------------2------------------------------------------ DLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEKSGNIFSGFADEFLEEAFQIDG ------------------------------------------------------------ GLVRKLKGEDDERDRIVQVDEDFEVLLETICTLRLKQNIGRSERADVFNPRGGRISTANY ------------------------------2----------------------------- HTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEV ------------------------------------------------------------ REGQVLMIPQNFVVIKRASDRGFEWIAFKTNDNAITNLLAGRVSQMRMLPLGVLSNMYRI ------------------------------------------------------------ SREEAQRLKYGQQEMRVLSPGR ---------------------- >PENICILLIN-BINDING PROTEI; SWP:P24228; PDB:2EX2A; NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR ------------------------------------------------------------ FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI ------------------------------------------------------------ FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMF -----------------1-------------1---------------------------- SQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKY ---------------2----------------2--------------------------- ELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHA ------------------------------------------------------------ RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHD ------------------------------------------------------------ NELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF ------------------------------------------------------------ VQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN ------------------------------------ >NKT15; SWP:Q6PIZ8; PDB:2EYSA; NQVEQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGR ---------------------1-------------------------------------- YTATLDADTKQSSLHITASQLSDSASYICVVSDRGSTLGRLYFGRGTQLTVWPDIQNPDP ----------------------------1------------------------------- AVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSN ---------------2-------------------------------------------- KSDFACANAFNNSIIPEDTFFP -----2---------------- >TRBV19 protein; SWP:Q6GMR4; PDB:2EYSB; DIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGMELHLIHYSYGVNSTEKGDLSS --------------------1--------------------------------------- ESTVSRIRTEHFPLTLESARPSHTSQYLCASSGLRDRGLYEQYFGPGTRLTVTEDLKNVF ----------------------------1------------------------------- PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQP -----------------------2------------------------------------ ALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWG ----------------------------2------------------------------- RAD --- >HYPOTHETICAL PROTEIN YDHA; SWP:P28224; PDB:2F09A; MQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGD ---------1-------------------------------------------------- EATVYKRDRIVLNNCQLQNPQR --------------1------- >CYTOLETHAL DISTENDING TOX; SWP:O87120; PDB:2F2FA; PSEPSNFMTLMGQNGALLTVWALAKRNWLWAYPNIYSQDFGNIRNWKIEPGKHREYFRFV ------------------------------------------------------------ NQSLGTCIEAYGNGLIHDTCSLDKLAQEFELLPTDSGAVVIKSVSQGRCVTYNPVSPTYY ------1------------1----------------------------2----------- STVTLSTCDGATEPLRDQTWYLAPPVLEATAVN -------2------------------------- >Cytolethal distending tox; SWP:Q7DK11; PDB:2F2FC; DPTTYPDVELSPPPRISLRSLLTAQPIKNDHYDSHNYLSTHWELIDYKGKEYEKLRDGGT ------------------------------------------------------------ LVQFKVVGAAKCFAFPGEGTTDCKDIDHTVFNLIPTNTGAFLIKDALLGFCMTSHDFDDL --------------------------------------------------1--------- RLEPCGISVSGRTFSLAYQWGILPPFGPSKILRP ----1----------------------------- >SEED MATURATION PROTEIN P; SWP:Q9ASY9; PDB:2F2GA; GVIDTWIDKHRSIYTAATRHAFVVSIRDGSVDLSSFRTWLGQDYLFVRRFVPFVASVLIR ------------------------------------------------------------ ACKDSGESSDEVVLGGIASLNDEIEWFKREGSKWDVDFSTVVPQRANQEYGRFLEDLSSE ------------------------------------------------------------ VKYPVITAFWAIEAVYQESFAHCLEDGNKTPVELTGACHRWGNDGFKQYCSSVKNIAERC ----------------------1--------------1---------------------- LENASGEVLGEAEDVLVRVLELEVAFWESRG ------------------------------- >KALATA-B1; SWP:P56254; PDB:2F2IA; CGETCVGGTCNTPGCTCSWDKCTRNGLPV 1---2----3----1-2----3------- >Peptidoglycan-recognition; SWP:Q8SXQ7; PDB:2F2LX; MVILKVAEWGGRPAKRMLDAQQLPINRVVISHTAAEGCESREVCSARVNVVQSFHMDSWG -------------------------------------1-----1---------------- WDHIGYNFLVGGDGRVYEGRGWDYVGAHTKGYNRGSIGISFIGTFTTRKPNERQLEACQL ------------------------------------------------------------ LLQEGVRLKKLTTNYRLYGHRQLSATESPGEELYKIIKKWPHWSHE ---------------------------------------------- >Thrombin inhibitor infest; SWP:Q95P16; PDB:2F3CI; DCACPRVLHRVCGSDGNTYSNPCTLDCAKHEGKPDLVQVHEGPCDP -1-2-------3----------2---1----------------3-- >PEPTIDE N-GLYCANASE; SWP:Q9JI78; PDB:2F4MA; GDSTILKVLQSNIQHVQLYENPVLQEKALTCIPVSELKRKAQEKLFRARKLDKGTNVSDE ------------------------------------------------------------ DFLLLELLHWFKEEFFRWVNNIVCSKCGGETRSRDEALLPNDDELKWGAKNVENHYCDAC ------------------------------------------------------------ QLSNRFPRYNNPEKLLETRCGRCGEWANCFTLCCRALGFEARYVWDYTDHVWTEVYSPSQ ----------------------1------------------------------------- QRWLHCDACEDVCDKPLLYEIGWGKKLSYIIAFSKDEVVDVTWRYSCKHDEVMSRRTKVK --------1--------------------------------------------------- EELLRETINGLNKQRQLSLSESRRKELLQRIIVELVEFISPKTPRPGLEHHHHHH ------------------------------------------------------- >THIOREDOXIN; SWP:Q8IEV4; PDB:2F51A; SDPIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEANKDVTFIKVD ---------------------------------1--1----------------------- VDKNGNAADAYGVSSIPALFFVKKEGNEIKTLDQFVGADVSRIKADIEKFK --------------------------------------------------- >TRAV20 protein; SWP:Q6PIZ8; PDB:2F53D; KQEVTQIPAALSVPEGENLVLNCSFTDSAIYNLQWFRQDPGKGLTSLLLIPFWQREQTSG ----------------------1------------------------------------- RLNASLDKSSGRSTLYIAASQPGDSATYLCAVRPTSGGSYIPTFGRGTSLIVHPYIQNPD -----------------------------1------------------------------ PAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWS ----------------2------------------------------------------- NKSDFACANAFN ------2----- >BUGD; SWP:Q7WGE2; PDB:2F5XA; YPERPVNVVPFAAGGPTDNVARSLAESRPTLGETVVVENKGGAGGTIGTTQVARAQPDGY ------------------------------------------------------------ SILLHAGFSTAPSLYKNPGYEPYTSFEPIGLVVDVPTIIARGDFPPNNIKELAEYVKKNA ------------------------------------------------------------ DKISLANAGIGAASHLCGTLVEALGVNLLTIPYKGTAPANDLLGKQVDLCDQTTNTTQQI ----------------1--------------------------------1---------- TSGKVKAYAVTSLKRVPTLPDLPTDESGYKGFEVGIWHGWAPKGTPKPVVDKLVKSLQAG ------------------------------------------------------------ LADPKFQERKQLGAEVLTNEANPEALQAKVKQQVPQWAELFKKAGVEKQ ------------------------------------------------- >RAS-RELATED PROTEIN RAB-2; SWP:O00194; PDB:2F7SA; DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAGKAFKVHLQ ------------------------------------------------------------ LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLI ---------------------------------------------------1-------- GNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQCVE --------------------------------------------------------1-- >HEPATOPANCREAS TRYPSIN; SWP:Q52V24; PDB:2F91A; IVGGTDATLGEFPYQLSFQETFIIGGFFSFHFCGASIYNENYAITAGHCVYGGDDDDYYE -----------------------------------1---------------2-------- ENNPSGLQIVAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSGSLTFNDN ------------------------------------------------------------ VAPIALPEQGHTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGAADEILD --------------------------------------------------------3--- SMICAGVPEEGGGKDSCQG -------------4----- >THIOL-DISULFIDE OXIDOREDU; SWP:P35160; PDB:2F9SA; EGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYANQYKHFKSQGVEI ------------------------------------1--1-------------------- VAVNVGESKIAVHNFKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGT ------------------------------------------------------------ TESIHDYNLIKPG ------------- >THIOREDOXIN II; SWP:TRX2_YEAST; PDB:2FA4A; MVTQLKSASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDE ------------------------------1--1-------------------------- VSDVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAAIKQAIASNV -------------------------------------------- >HYPOTHETICAL PROTEIN ATU0; SWP:Q8UIR5; PDB:2FA8A; TKPRIAIRYCTQCNWLLRAGWAQEILQTFASDIGEVSLIPSTGGLFEITVDGTIIWERKR ---------1--1----------------------------------------------- DGGFPGPKELKQRIRDLIDPERDLG ------------------------- >Ig heavy chain V-III regi; SWP:P01772; PDB:2FB4H; EVQLVQSGGGVVQPGRSLRLSCSSSGFIFSSYAMYWVRQAPGKGLEWVAIIWDDGSDQHY ---------------------1-------------------------------------- ADSVKGRFTISRNDSKNTLFLQMDSLRPEDTGVYFCARDGGHFC -----------------------------------1-------- >LYSOZYME 1; SWP:Q7YT16; PDB:2FBDA; KTFTRCSLAREMYALGVPKSELPQWTCIAEHESSYRTNVVGPTNSNGSNDYGIFQINNYY -----1--------------------2--------------------------------- WCQPSNGRFSYNECHLSCDALLTDNISNSVTCARKIKSQQGWTAWSTWKYCSGSLPSIND -3-----------4---3-------------4------------------2--------- CF 1- >Ig heavy chain V region J; SWP:P01810; PDB:2FBJH; EVKLLESGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINY ---------------------1-------------------------------------- TPSLKDKFIISRDNAKNSLYLQMSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAES -----------------------------------1------------------------ ARNPTIYPLTLPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVNFPPALASGGR -----------------------2------------------------------------ YTMSNQLTLPAVECPEGESVKCSVQHDSNPVQELDVNCSG -------------3-------2---------------3-- >FC GAMMA RIIB; SWP:P31994; PDB:2FCBA; APPKAVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANN -------------------------1---------------------------------- NDSGEYTCQTGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTF -------1--------------------------------------2------------- FQNGKSKKFSRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPA ------------------------------2---------------------- >Fibroblast growth factor ; SWP:P55075; PDB:2FDBM; FTQHVREQSLVTDQLSRRLIRTYQLYSRTSGKHVQVLANKRINAMAEDGDPFAKLIVETD ------------------------------------------------------------ TFGSRVRVRGAETGLYICMNKKGKLIAKSNGKGKDCVFTEIVLENNYTALQNAKYEGWYM -----------------1-----------------1------------------------ AFTRKGRPRKGSKTRQHQREVHFMKRLPR ----------------------------- >CATHEPSIN K; SWP:P43235; PDB:1VSNA; APDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKATGALLNLAPQNLVDCVSEN ---------------------1-------------------------------------- DGCGGGYMTNAFQYVQRNR --1---------------- >APOLIPOPROTEIN(A); SWP:P08519; PDB:2FEBA; IEGRHMAPTENSTGVQDCYRGDGQSYRGTLSTTITGRTCQSWSSMTPHWHRRIPLYYPNA -----------------1--------------------2--------------------- GLTRNYCRNPDAEIRPWCYTMDPSVRWEYCNLTRCPVTESSV ------3----------2-----------3----1------- >RABBITPOX ENCODED CC CHEM; SWP:O10647; PDB:2FFKA; MPASLQQSSSSSSSCTEEENKHHMGIDVIIKVTKQDQTPTNDKICQSVTEITESESDPDP --------------1-----------------------------2--------------- EVESEDDSTSVEDVDPPTTYYSIIGGGLRMNFGFTKCPQIKSISESADGNTVNARLSSVS ------------------------------------3----------------------- PGQGKDSPAITHEEALAMIKDCEVSIDIRCSEEEKDSDIKTHPVLGSNISHKKVSYEDII ---------------------3-------4------------------------------ GSTIVDTKCVKNLEFSVRIGDMCKESSELEVKDGFKYVDGSASKGATDDTSLIDSTKLKA --------4-------------1------------------------------------- CV 2- >POLYPEPTIDE N-ACETYLGALAC; SWP:Q10471; PDB:2FFUA; KVRWPDFNQEAYVGGTMVRSGQDPYARNKFNQVESDKLRMDRAIPDTRHDQCQRKQWRVD ---------------------------------------------------1-------- LPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKIEKVR ------------------------------------------------------------ VLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIID ------------------------------------------------------------ VINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMD ------------------------------------------------------------ KFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSG ------------------------------2--------1-------------------- TVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKKLSCKPFKWYLENVY ------------------------------------------------2----------- PELRVPDHQDIAFGALQQGTNCLDTLGHFADGVVGVYECHNAGGNQEWALTKEKSVKHMD ---------------------3----------------3--------------------- LCLTVVDRAPGSLIKLQGCRENDSRQKWEQIEGNSKLRHVGSNLCLDSRTAKSGGLSVEV -4----------------4-------------------------5--------------- CGPALSQQWKFTLN 5------------- >H52 FAB (HEAVY CHAIN); SWP:NA; PDB:2FGWH; EVQLVESGGGLVQPGGSLRLSCATSGYTFTEYTMHWMRQAPGKGLEWVAGINPKNGGTSH ---------------------1-------------------------------------- NQRFMDRFTISVDKSTSTAYMQMNSLRAEDTAVYYCARWRRYFDVWGQGTLVTVSSASTK -----------------------------------1------------------------ GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS ----------------------2------------------------------------- LSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD ------------------2--------------------- >CARBOXYSOME SHELL POLYPEP; SWP:O85042; PDB:2FGYA; HPACITLPERTCRHPLTDLEANEQLGRCEDSVKNRFDRVIPFLQVVAGIPLGLDHVTRVQ ---1-------1------------------------------------------------ ELAQSSLGHTLPEELLKDNWISGHNLKGIFGYATAKALTAATEQFSRDDSASAIGFFLDC ------------------------------------------------------------ GFHAVDISPCADGRLKGLLPYILRLPLTAFTYRKAYAGSMFDIEDDLAQWEKNELRRYRE ------------------------------------------------------------ GVPNTADQPTRYLKIAVYHFSTSDPTHSGCAAHGSNDRAALEAALTQLMKFREAVENAHC -----------------------------------------------------------2 CGASIDILLIGVDTDTDAIRVHIPDSKGFLNPYRYVDNTVTYAQTLHLAPDEARVIIHEA 2----------------------------------------------------------- ILNANRSDGWAKGNGVASEGMRRFIGQLLINNLSQIDYVVNRHGGRYPPNDIGHAERYIS ------------------------------------------------------------ VGDGFDEVQIRNLAYYAHLDTVEENAIDVDVGITIFTKLNLSRGLPIPIAIHYRYDPNVP ------------------------------------------------------------ GSRERTVVKARRIYNAIKERFSSLDEQNLLQFRLSVQAQDIGSPIEEVASA --------------------------------------------------- >PULLULANASE; SWP:P07206; PDB:2FHFA; DVVVRLPDVAVPGEAVQASARQAVIHLVDIAGITSSTPADYATKNLYLWNNETCDALSAP -----------------------------------------------------1------ VADWNDVSTTPTGSDKYGPYWVIPLTKESGCINVIVRDGTNKLIDSDLRVSFSDFTDRTV ------------------------------1----------------------------- SVIAGNSAVYDSRADAFRAAFGVALADAHWVDKTTLLWPGGENKPIVRLYYSHSSKVAAD ------------------------------------------------------------ SNGEFSDKYVKLTPTTVNQQVSMRFPHLASYPAFKLPDDVNVDELLQGETVAIAAESDGI ------------------------------------------------------------ LSSATQVQTAGVLDDTYAAAAEALSYGAQLTDSGVTFRVWAPTAQQVELVIYSADKKVIA ------------------------------------------------------------ SHPMTRDSASGAWSWQGGSDLKGAFYRYAMTVYHPQSRKVEQYEVTDPYAHSLSTNSEYS ------------------------------------------------------------ QVVDLNDSALKPEGWDGLTMPHAQKTKADLAKMTIHESHIRDLSAWDQTVPAELRGKYLA ------------------------------------------------------------ LTAQESNMVQHLKQLSASGVTHIELLPVFDLATVNEFSDKVADIQQPFSRLCEVNSAVKS ---------------------------------------------------2-------- SEFAGYCDSGSTVEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYDPFHYTVPEGSY ------2----------------------------------------------------- ATDPEGTARIKEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRL ------------------------------------------------------------ NETTGSVESATCCSDSAPEHRMFAKLIADSLAVWTTDYKIDGFRFDLMLYHPKAQILSAW -----------33----------------------------------------------- ERIKALNPDIYFFGEGWDSNQSDRFEIASQINLKGTGIGTFSDRLRDAVRGGGPFDSGDA ------------------------------------------------------------ LRQNQGVGSGAGVLPNELTTLSDDQARHLADLTRLGMAGNLADFVLIDKDGAVKRGSEID ------------------------------------------------------------ YNGAPGGYAADPTEVVNYVSKHDNQTLWDMISYKAAQEADLDTRVRMQAVSLATVMLGQG ------------------------------------------------------------ IAFDQQGSELLRSKSFTRDSYDSGDWFNRVDYSLQDNNYNVGMPRSSDDGSNYDIIARVK ------------------------------------------------------------ DAVATPGETELKQMTAFYQELTALRKSSPLFTLGDGATVMKRVDFRNTGADQQTGLLVMT ------------------------------------------------------------ IDDGMQAGASLDSRVDGIVVAINAAPESRTLQDFAGTSLQLSAIQQAAGDRSLASGVQVA ------------------------------------------------------------ ADGSVTLPAWSVAVLELPQGESQGAGLPVSSK -------------------------------- >FIBRINOGEN; SWP:P02679; PDB:2FIBA; VQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSV ----------1----------------------------1-------------------- DFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADY ------------------------------------------------------------ AMFKVGPEADKYRLTYAYFAGGDAGDAFDGFDFGDDPSDKFFTSHNGMQFSTWDNDNDKF ------------------------------------------------------------ EGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWATWKTRWYSMKKT ---2------------2------------------------------------------- TMKIIPFNRL ---------- >T-CELL SURFACE GLYCOPROTE; SWP:P11609; PDB:2FIKA; YTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKLQ ------------------------------------------------------------ HMFQVYRVSFTRDIQELVKYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQ ------------------------------------------------------------ TVPGAPSWLDLPIKVLNADQGTSATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLS ------------------------------------------------------------ SVPSSAHGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVE -------------1---------------------------------------------- AGEEAGLACRVKHSSLGGQDIILYW --------1---------------- >JUVENILE HORMONE ESTERASE; SWP:Q7M4E5; PDB:2FJ0A; EEVVVRTESGWIRGLKRRAEGNKSYASFRGVPYAKQPLGELRFKELQPLEPWQDELDATQ ------------------------------------------------------------ EGPVCQQTDVLYGRIMRPRGMSEACIHANIHVPYYALPRDGLPVLVFIHGGGFAFGSGDS ----1-------------------1----------------------------------- DLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGG ------------------------------------------------------------ RPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTSSSAFFTTNPVFAQYINKLFV ------------------------------------------------------------ TNIGITATDPEEIHQKLIEMPAEKLNEANRFLLEQFGLTTFFPVVESPINGVTTILDGDP ------------------------------------------------------------ EQLIAKGRGKHIPLIIGFTDAECEIFRRQFEQIDIVSKIKENPGILVPLSVLFSSAPDTV ----------------------2------------------------------------- AEITKAMHEKYFKKSVDMEGYIELCTDSYFMYPAISLAIKRARSNGAPVYLYQFSFDGDY ------------------------2----------------------------------- SVFREVNHLNFEGAGHIEDLTYVFRTNSMLGGHASFPPHDKDDHMKYWMTSFITNFMKYS ------------------------------------------------------------ NPVTDAKLWPEVRADNLRYQDIDTPDVYQNVKPHSEQRDMLDFFDSIYNW -------------------------------------------------- >MAJOR PRION PROTEIN; SWP:Q95211; PDB:2FJ3A; LGGYMLGSAMSRPLIHFGNDYEDRYYRENMYRYPNQVYYRPVDQYSNQNSFVHDCVNITV ------------------------------------------------------1----- KQHTVTTTTKGENFTETDIKIMERVVEQMCITQYQQESQAAYQRA -----------------------------1--------------- >BOWMAN-BIRK TYPE TRYPSIN ; SWP:P12940; PDB:2FJ8A; KRPWKCCDEAVCTRSIPPICTCMDEVFECPKTCKSCGPSMGDPSRRICQDQYVGDPGPIC -----12----3-------3-2------4---5--4-----------5-----------1 RPWECCDKAICTRSNPPTCRCVDEVKKCAPTCKTCLPSRSRPSRRVCIDSYFGPVPPRCT ----67----8-------8-7------9---a--9-----------a-----------6- >IGHG1 protein; SWP:Q569F4; PDB:2FJFH; EVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKGLEWVAGITPAGGYTYY ---------------------1-------------------------------------- ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSS -----------------------------------1------------------------ ASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL ---------------------2-------------------------------------- SSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC -----------------2-------------------- >IGHG1 protein; SWP:Q569F4; PDB:2FJHH; EVQLVESGGGLVQPGGSLRLSCAASGFTINASWIHWVRQAPGKGLEWVGAIYPYSGYTNY ---------------------1-------------------------------------- ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGHSTSPWAMDYWGQGTLVTVS -----------------------------------1------------------------ SASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS ----------------------2------------------------------------- LSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC ------------------2-------------------- >IGKC protein; SWP:Q6GMX8; PDB:2FJHL; DIQMTQSPSSLSASVGDRVTITCRASQVIRRSLAWYQQKPGKAPKLLIYAASNLASGVPS ----------------------1------------------------------------- RFSGSGSGTDFTLTISSLQPEDFATYYCQQSNTSPLTFGQGTKVEIKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC -------------2-------------------- >AMYLOID BETA A4 PROTEIN P; SWP:Q6P0P4; PDB:2FMAA; EACKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPL --1----------2-------------3---------------2-----------31-- >HYDROPHOBIN; SWP:Q04571; PDB:2FMCA; ATTIGPNTCSIDDYKPYCCQSMSGPAGSPGLLNLIPVDLSASLGCVVGVIGSQCGASVKC --------1--------23-------------------------3--------2-----1 CKDDVTNTGNSFLIINAANCVA 4------------------4-- >CYSTEINE PROTEINASE EP-B ; SWP:P25250; PDB:2FO5A; DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA ----------------------1---------------------------------2--- DNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVP ----1--------------------------------2---------------------- ANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECGTELDHGVAVVGYGVAEDGKA --------------------------------------3--------------------- YWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTY ------------------------------3------------- >CHORISMATE MUTASE; SWP:O07746; PDB:2FP1A; GTSQLAELVDAAAERLEVADPVAAFKWRAQLPIEDSGRVEQQLAKLGEDARSQHIDPDYV ------------------------------------------------------------ TRVFDDQIRATEAIEYSRFSDWKLNPASAPPEPPDLSASRSAIDSLNNRMLSQIWSHWSL ------------------------------------------------------------ LSAPSCAAQLDRAKRDIVRSRHLDSLYQRALTTATQSYCQALPPA -----1--------------------------------1------ >STRICTOSIDINE SYNTHASE; SWP:P68175; PDB:2FP8A; KEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCEN ---------------------------------------------------------1-- STDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLY ---------1-------------------------------------------------- AVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGG ------------------------------------------------------------ AEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPNPGNIKRNADGHFWVSSSEE ------------------------------------------------------------ LDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGIL ------------------------------------------------------------ VY -- >HYPOTHETICAL PROTEIN RV27; SWP:O07216; PDB:2FR2A; DLAPALQALSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVGKPFLTYTQQTRAVADGKP ------------------------------------------------------------ LHSETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAK ----------1---1--------------------------------------------- EVTALDRSYRIDGDELSYSLQMRAVGQPLQDHLAAVLHRQR ----------------------------------------- >Trem-like transcript 1 pr; SWP:Q86YW5; PDB:2FRGP; GSLPEVLQAPVGSSILVQCHYRLQDVKAQKVWCRFLPEGCQPLVSSAVDRRAPAGRRTFL ------------------1-------------2------2-------------------- TDLGGGLLQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSLNILPP ------------------------1--------------------- >BIGLYCAN; SWP:P21809; PDB:2FT3A; AMCPFGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALV --1---2-1------2-------------------------------------------- LVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVELRIHDNRIRKVPKGVFS ------------------------------------------------------------ GLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNK ------------------------------------------------------------ IQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLK ------------------------------------------------------------ LLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLA --------------------3--------------------------------3------ IQF --- >AZURIN; SWP:P00282; PDB:2FT6A; CSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTD 1----------------------1------------------------------------ GMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCTPHPMKGTLT ------------------------------------------------------------ LK -- >INOSITOL MONOPHOSPHATASE ; SWP:O14732; PDB:2FVZA; WEECFQAAVQLALRAGQIIRKALTEETETDHLVEDLIISELRERFPSHRFIAEEAKCVLT --------------------------------------------------------1--- HSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCN ------------------------------------------------------------ GQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCH ------------------------------------------------------------ LASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMACRVVAASTREMAMLI ---------------1-------------------------------------------- AQAL ---- >LIPASE; SWP:A0HXJ4; PDB:2FX5A; APLPDTPGAPFPAVANFDRSGPYTVSSQSEGPSCRIYRPRDLGQGGVRHPVILWGNGTGA ---------------------------------1-------------------------- GPSTYAGLLSHWASHGFVVAAAETSNAGTGREMLACLDYLVRENDTPYGTYSGKLNTGRV -----------------------------------1------------------------ GTSGHSQGGGGSIMAGQDTRVRTTAPIQPYTLGLGHDSASQRRQQGPMFLMSGGGDTIAF ------------------------------------------------------------ PYLNAQPVYRRANVPVFWGERRYVSHFEPVGSGGAYRGPSTAWFRFQLMDDQDARATFYG ------------------------------------------------------------ AQCSLCTSLLWSVERRGL --2--2------------ >BETA-1,4-GALACTOSYLTRANSF; SWP:P15291; PDB:2FY7A; RGSASLPACPEESPLLVGPMLIEFNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAII --------1-----------------------------------------1--------- IPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDY ------------------------------------------------------------ TCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTIN -2------------------2--------------------------------------- GFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRNPQRFDRIAHTKETMLSDG ------------------------------------------------------------ LNSLTYQVLDVQRYPLYTQITVDIGTPS ---------------------------- >Low-density lipoprotein r; SWP:Q07954; PDB:2FYJA; SARTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYPTCFPLTQFTCNNGRCIN ----1------2----1------3-----2---------3----4-------5----4-- INWRCDNDNDCGDNSDEAGCSH ----6-----5--------6-- >HYDROPHOBIN-1; SWP:P52754; PDB:2FZ6A; NGNGNVCPPGLFSNPQCCATQVLGLIGLDCKVPSQNVYDGTDFRNVCAKTGAQPLCCVAP ------1---------23-----------3----------------2--------14--- VAGQALLCQTAV -------4---- >Beta-lactamase inhibitory; SWP:P35804; PDB:2G2UB; AGVMTGAKFTQIQFGMTRQQVLDIAGAENCETGGSFGDSIHCRGHAAGDYYAYATFGFTS -----------------------------1-----------1------------------ AAADAKVDSKSQEKLLAPSAPTLTLAKFNQVTVGMTRAQVLATVGQGSCTTWSEYYPAYP ------------------------------------------------2----------- STAGVTLSLSCFDVDGYSSTGFYRGSAHLWFTDGVLQGKRQWDLV ----------2---------------------------------- >PHOSPHOLIPASE A2 VRV-PL-V; SWP:P59071; PDB:2G58A; SLLEFGKMILEETGKLAIPSYSSYGCYCGWGGKGTPKDATDRCCFVHDCCYGNLPDCNPK -------------------------1-2--------------32----45------6--- SDRYKYKRVNGAIVCEKGTSCENRICECDKAAAICFRQNLNTYSKKYMLYPDFLCKGELK --------------7-----6----7-5------3-------------------1----- C 4 >GNA33; SWP:Q9L6H1; PDB:2G5DA; PDRPAGIPDPAGTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQD ------------------------------------------------1----------- VCAQAFQTPIHSFQAKRFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDGRRTERARFPI -1---------------------------------------------------------- YGIPDDFISVPLPLVRIRQTGKNSGTHTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQ ------------------------------------------------------------ INGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYM ------------------------------------------------------------ ADKGYLKLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELDGPVGALGTPLMGEYAG ------------------------------------------------------------ AIDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAG ------------------------------------------------------------ KQKTTGYVWQLLPNGMKPEYRP ---------------------- >RIBOSOME-INACTIVATING PRO; SWP:P85101; PDB:2G5XA; RPSWTVDSDSAKYSSFLDSLREEFGRGTPKVCNIPVTKKANNDKFVLVNLVLPFNRNTIT -------------------------------1---------------------------- LAFRASDAYLVGFQDRDSKTNKLRANFFSDEYRALSGKYKSIFTDAEVLAPALPCASTYT ------------------------------------------------------------ DLQNKAGVSREKLSLGVSSLQTAFTAVYGKVFTGKNVAKFALISIQMVAEAARFKYIEDQ ------------------------------------------------------------ VINRGMYSSFEAGARITLLENNWSKISEQYHKSCKLGGGQFTEEEMKLGLLLYN ---------------------------------1-------------------- >DUAL SPECIFICITY PROTEIN ; SWP:Q16690; PDB:2G6ZA; GSHMGPVEILPFLYLGSAYHASKCEFLANLHITALLNVSRRTSEACMTHLHYKWIPVEDS -----------------------1---------------------1-------------- HTADISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYI ------------------------------------------------------------ KQRRSMVSPNFGFMGQLLQYESEILPS --------------------------- >ENDONUCLEASE I; SWP:Q2XSK9; PDB:2G7EA; FSHAKNEAVKIYRDHPVSFYCGCEIRWQGKKGIPDLESCGYQVRKNENRASRIEWEHVVP --------------------1-2---------------2--------------------- AWQFGHQLQCWQQGGRKNCTRTSPEFNQMEADLHNLTPAIGEVNGNRSNFSFSQWNGIDG ---------3--------3----------------------------------------- VTYGQCEMQVNFKERTAMPPERARGAIARTYLYMSEQYGLRLSKAQNQLMQAWNNQYPVS -----1------------------------------------------------------ EWECVRDQKIEKVQGNSNRFVREQCPN ---4--------------------4-- >COMPLEMENT FACTOR H; SWP:P08603; PDB:2G7IA; GKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCRNGQWSEPPKCLHP --1----------------------------2-------------1----------2--- CVISREIMENYNIALRWTAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCWDGKLEYP 3---------------------------------4----------------3-------- TCAK -4-- >Mucosa-associated lymphoi; SWP:Q9UDY8; PDB:2G7RA; TLNRLREPLLRRLSELLDQAGWRRLAELAGLSCLDLEQCSLKVLEPEGSPSLCLLKLMGE --------------------------------------1-------------1------- KGCTVTELSDFLQAMEHTEVLQLLSP -------------------------- >CATIONIC TRYPSIN; SWP:NA; PDB:2G81I; PCCDRCECTKSIPPQCRCSDVRLNSCHSACKSCACTFSIPAQCFCGDINDFCYKPC -12--3-4-------4-2-------5---6--5-7-------7-6------3---1 >Cytidine and deoxycytidyl; SWP:Q82Y41; PDB:2G84A; MNDALHIGLPPFLVQANNEPRVLAAPEARMGYVLELVRANIAADGGPFAAAVFERDSGLL ------------------------------------------------------------ IAAGTNRVVPGRCSAAHAEILALSLAQAKLDTHDLSADGLPACELVTSAEPCVMCFGAVI ------------------------------------------------------------ WSGVRSLVCAARSDDVEAIGFDEGPRPENWMGGLEARGITVTTGLLRDAACALLREYNAC -----------------------------------------------------------1 NGVIYNARC --------1 >DNA TOPOISOMERASE I; SWP:P46799; PDB:2GAIA; KYIVVESPAKAKTIKSILGNEYEVFASMGHIIDLPKSKFGVDLEKDFEPEFAVIKGKEKV ------------------------------------------------------------ VEKLKDLAKKGELLIASDMDREGEAIAWHIARVTNTLGRKNRIVFSEITPRVIREAVKNP ------------------------------------------------------------ REIDMKKVRAQLARRILDRIVGYSLSPVLWRNFKSNLSAGRVQSATLKLVCDREREILRF ------------------------------------------------------------ VPKKYHRITVNFDGLTAEIDVKEKKFFDAETLKEIQSIDELVVEEKKVSVKKFAPPEPFK ------------------------------------------------------------ TSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGHIAFITYMRTDSTRVSDYAKEEARN ------------------------------------------------------------ LITEVFGEEYVGAHEAIRPTNVFMTPEEAGKYLNSDQKKLYELIWKRFLASQMKPSQYEE ------------------------------------------------------------ TRFVLRTKDGKYRFKGTVLKKIFDGYEKVWKTERNTGEFPFEEGESVKPVVVKIEEQETK ------------------------------------------------------------ PKPRYTEGSLVKEMERLGIGRPSTYASTIKLLLNRGYIKKIRGYLYPTIVGSVVMDYLEK ------------------------------------------------------------ KYSDVVSVSFTAEMEKDLDEVEQGKKTDKIVLREFYESFSSVFDRNDRIVVDFPTNQKCS ----------------------------------------------------------1- CGKEMRLSFGKYGFYLKCECGKTRSVKNDEIAVIDDGKIFL 2----------------1-2--------------------- >BETA-1,6-N-ACETYLGLUCOSAM; SWP:Q09324; PDB:2GAKA; RHLELNVNCTKILQGDPEEIQKVKLEILTVQFKKRPRWTPHDYINMTRDCASFIRTRKYI --------1----------------------------------------2---------- VEPLTKEEVGFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGIA ----------------------------------------3------------------- SCFDNVFVASQLESVVYASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIV -2--------------------------3------------------------------- RKLKCSTGENNLETEKMPPNKEERWKKRYAVVDGKLTNTGIVKAPPPLKTPLFSGSAYFV ------------------------------------------------------------ VTREYVGYVLENENIQKLMEWAQDTYSPDEFLWATIQRIPEVPGSFPSSNKYDLSDMNAI ------------------------------------------------------------ ARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAGDLSWMLRQHHLFANKFDMDVDPFA ---------------------4--------4----------------------------- IQCLDEHLRRKALE --1----------- >DIPEPTIDYL PEPTIDASE 4; SWP:P14740; PDB:2GBCA; RRTYTLADYLKNTFRVKSYSLRWVSDSEYLYKQENNILLFNAEHGNSSIFLENSTFEIFG ------------------------------------------------------------ DSISDYSVSPDRLFVLLEYNYVKQWRHSYTASYSIYDLNKRQLITEEKIPNNTQWITWSQ ------------------------------------------------------------ EGHKLAYVWKNDIYVKIEPHLPSHRITSTGKENVIFNGINDWVYEEEIFGAYSALWWSPN ------------------------------------------------------------ GTFLAYAQFNDTGVPLIEYSFYSDESLQYPKTVWIPYPKAGAVNPTVKFFIVNTDSLSST ------------------------------------------------------------ TTTIPMQITAPASVTTGDHYLCDVAWVSEDRISLQWLRRIQNYSVMAICDYDKTTLVWNC ------------------------------------------------1----------1 PTTQEHIETSATGWCGRFRPAEPHFTSDGSSFYKIVSDKDGYKHICQFQKDRKPEQVCTF ---------------------------------------------2-----------2-- ITKGAWEVISIEALTSDYLYYISNEYKEMPGGRNLYKIQLTDHTNKKCLSCDLNPERCQY -----------------------------------------------3--3------4-- YSVSLSKEAKYYQLGCRGPGLPLYTLHRSTDQKELRVLEDNSALDKMLQDVQMPSKKLDF ---------------4-------------------------------------------- IVLNETRFWYQMILPPHFDKSKKYPLLIDVYAGPCSQKADAAFRLNWATYLASTENIIVA ------------------------------------------------------------ SFDGRGSGYQGDKIMHAINKRLGTLEVEDQIEAARQFLKMGFVDSKRVAIWGWSYGGYVT ------------------------------------------------------------ SMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFK ------------5----------------------------------------------- QVEYLLIHGTADDNVHFQQSAQISKALVDAGVDFQAMWYTDEDHGIASSTAHQHIYSHMS ------------------------------------------------------------ HFLQQCFSLR -----5---- >IGG2A CNJ206 FAB (HEAVY C; SWP:NA; PDB:2GFBA; QIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPK ----------------------1------------------------------------- RFSGSRSGSDYSLTISSLESEDFADYYCLQYASSPYTFGGGTKLEILRGGAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >GENOME POLYPROTEIN; SWP:NA; PDB:2GG1A; TYTVCDKTKFTWKRAPTDSGHDTVVMEVGFSGTRPCRIPVRAVAHGVPEVNVAMLITPNP ----1------------------------------1------------------------ TMENNGGGFIEMQLPPGDNIIYVGDLNHQWFQK --------------------------------- >SCO1 PROTEIN HOMOLOG, MIT; SWP:O75880; PDB:2GGTA; LLGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLP ----------------------------------1---1--------------------- DLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDE ------------------------------------------------------------ DYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMRPYR -------------------------------------------- >ARTEMIN; SWP:O60609; PDB:2GH0A; DSDLCLKFAMLCTLNDKCDRLRKAYGEACSGPHCQRHVCLRQLLTFFEKAAEPHAQGLLL ----1------2-----2----------3----4----3--------------------- CPCAPNDRGCGERRRNTIAPNCALPPVAPNCLELRRLCFSDPLCRSRLVDFQTHCHPMDI 1-5------5-----------4--------6------7-----7----------8----- LGTCATEQSRCLRAYLGLIGTAMTPNFVSNVNTSVALSCTCRGSGNLQEECEMLEGFFSH ---9------8---------------------------6-a---------a--------- NPCLTEAIAAKMRFHSQLFS --9----------------- >SPIKE GLYCOPROTEIN; SWP:NA; PDB:2GHVC; TNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCF ----------------------------------------------1------------- SNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTGNYNYK ---------------------------------------1-------------------- YRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVL ---------------------------2------2------------------------- SFE --- >SPIKE GLYCOPROTEIN; SWP:NA; PDB:2GHWB; EVQLVQSGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYY ---------------------1-------------------------------------- ADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGS -----------------------------------1------------------------ ETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPD ----------------------2------------------------------------- RFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVKSGLVP ---------------------------2------------------------ >GLYCOPROTEIN E; SWP:P04488; PDB:2GIYA; HVRGVTVRMETPEAILFSPGETFSTNVSIHAIAHDDQTYSMDVVWLRFDVPTSCAEMRIY -----------------------------------------------------1------ ESCLYHPQLPECLSPADAPCAASTWTSRLAVRSYAGCSRTNPPPRCSAEAHMEPVPGLAW --2--------2-------1----------------3--------3-------------- QAASVNLEFRDASPQHSGLYLCVVYVNDHIHAWGHITISTAAQYRNAVVEQPLDIEGRG ----------------------------------------------------------- >CYCLOVIOLACIN O14; SWP:NA; PDB:2GJ0A; GSIPACGESCFKGKCYTPGCSCSKYPLCAKN -----1---2----3----1-2-----3--- >Putative uncharacterized ; SWP:Q2YDB4; PDB:2GJ6D; KEVEQNSGPLSVPEGAIASLNCTYSDRGSQSFFWYRQYSGKSPELIMSIYSNGDKEDGRF ---------------------1-------------------------------------- TAQLNKASQYVSLLIRDSQPSDSATYLCAVTTDSWGKLQFGAGTQVVVTPDIQNPDPAVY ---------------------------1-------------------------------- QLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKTVLDMRSMDFKSNSAVAWSNKSD ------------2----------------------------------------------- FACANAFNNSIIPEDTFFPS --2----------------- >A21 SINGLE-CHAIN ANTIBODY; SWP:NA; PDB:2GJJA; ADIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFT -----------------------1------------------------------------ RKSGVPDRFTGSGSGTDFTLTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGEVQL ----------------------------------1------------------------- QQSGPEVVKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKF -----------------2------------------------------------------ KNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGNYEEYAMDYWGQGTSVTVS -------------------------------2----------------------- >BETA-HEXOSAMINIDASE ALPHA; SWP:P06865; PDB:2GJXA; LWPWPQNFQTSDQRYVLYPNNFQFQYDVSSAAQPGCSVLDEAFQRYRDLLFGTLEKNVLV -----------------------------------1------------------------ VSVVTPGCNQLPTLESVENYTLTINDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFI -------1---------------------------------------------------- NKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESF ------------------------------------------------------------ TFPELMRKGSYNPVTHIYTAQDVKEVIEYARLRGIRVLAEFDTPGHTLSWGPGIPGLLTP ------------------------------------------------------------ CYSGSEPSGTFGPVNPSLNNTYEFMSTFFLEVSSVFPDFYLHLGGDEVDFTCWKSNPEIQ 2--------------------------------------------------2-------- DFMRKKGFGEDFKQLESFYIQTLLDIVSSYGKGYVVWQEVFDNKVKIQPDTIIQVWREDI ------------------------------------------------------------ PVNYMKELELVTKAGFRALLSAPWYLNRISYGPDWKDFYVVEPLAFEGTPEQKALVIGGE ------------------------------------------------------------ ACMWGEYVDNTNLVPRLWPRAGAVAERLWSNKLTSDLTFAYERLSHFRCELLRRGVQAQP ------------------------------------------------3----------- LNVGFCEQEFEQ -----3------ >REGULATOR OF NONSENSE TRA; SWP:Q92900; PDB:2GK6A; GSRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPLMQG ------------------------------------------------------------ DEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTS ------------------------------------------------------------ FDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAV ------------------------------------------------------------ KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL ----------------------------------------1------------------- KVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDLSSADEKRYRALKRTAE ------------------------------------------------------------ RELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDH -----------1------------------------------------------------ CQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQN ------------------------------------------------------------ GVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKA ------------------------------------------------------------ GAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVR ------------------------------------------------------------ IGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRES ------------------------------------------------------------ LM -- >NUCLEASE; SWP:Q924Q1; PDB:2GKIA; EVQLQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKY ---------------------1-------------------------------------- NEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSS -----------------------------------1------------------------ DLVMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTR ----------------------2------------------------------------- ESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSGTKLEIKHH ---------------------------------2--------------------- >CALCITONIN-1; SWP:P01263; PDB:2GLGA; CSNLSTCVLGKLSQELHKLQTYLATNTGSGTP 1-----1------------------------- >CALCITONIN-1; SWP:P01263; PDB:2GLHA; CSNLSTCVLGKLSQELHKLQTYPRTNTGSGTP 1-----1------------------------- >GRANULOCYTE-MACROPHAGE CO; SWP:P04141; PDB:2GMFA; RSPSPSTQPWEHVNAIQEARRLLNLSRDTAAEMNETVEVISEMFDLQEPTCLQTRLELYK --------------------------------------------------1--------- QGLRGSLTKLKGPLTMMASHYKQHCPPTPETSCATQIITFESFKENLKDFLLVIPFDCWE ------------------------2-------1------------------------2-- P - >VASCULAR ENDOTHELIAL GROW; SWP:P52584; PDB:2GNNA; DSNTKGWSEVLKGSECKPRPIVVPVSETHPELTSQRFNPPCVTLMRCGGCCNDESLECVP ---------------1------------------------------2---3------1-- TEEVNVTMELLGGMQRLSFVEHKKCDCRPRFT ------------------------2-3----- >EVM001; SWP:Q9JFS0; PDB:2GRKA; SFASSCTEEENNHHMGIDVIIKVTKQDQTPTNDKICQSVTEVTESEDDGVSEEVVKGDPT -----1-----------------------------2------------------------ TYYTVVGGGLRMNFGFTKCPQIKSISESADGNTVNARLSSVSPMYGIESPAITHEEALAM ------------------3----------------------------------------- INDCAVSINIKCSEEEKDSNIKTHPVLGSNISHKKVRYEDIIGSTIVDIKCVKDLEFSVR ---3-------4--------------------------------------4--------- IGDMCKEASELEVKDGFKYIDGSVSEGATDDTSLIDSTKLKACVGSLV ----1-------------------------------------2----- >LPQW; SWP:NA; PDB:2GRVA; APTQIIMAIDSIGPGFNPHLLSDQSPVNAAIASLVLPSSFRPVPDPTSPTGSRWELDTTL ------------------------------------------------------------ LESAEVTQENPFTVTYKIRPEAQWTDNAPIAADDYWYLWRQMVSQPGVVDPAGYDLITGV ------------------------------------------------------------ QSVEGGKQAVVTFSQPYPAWRELFNDILPAHIVKDIPGGFGAGLARAMPVTGGQFRVETI ------------------------------------------------------------ DPQRDEILLARNDRFWSVPAKPDLVLFRRGGAPAALADSIRNGDTQVAQVHGGAATFAQL ------------------------------------------------------------ SAIPDVRTARIVTPRVMQLTLRAQQPKLADPQVRKAILGLIDVDLLASVGAGDDNTVTLA ------------------------------------------------------------ QAQVRSPSDPGYVPTAPPAMTRDDALELLRDAGYVSEPVPPPRERIVKDGVPLTIVLGVA ------------------------------------------------------------ SNDPTSVAVANTAADQLRNVGIDASVLALDPVALYGDALVNNRVDAVVGWRQAGGDLATV ------------------------------------------------------------ LASRYGCRALEAQAPSNITGICDRSIQPRIDAALDGTDDIADVIQAVEPRLWNMATVLPI ------1--------------1-------------------------------------- LQDTTIVAAGPSVQNVSLTGAVPVGIVGDAGDWTKT ------------------------------------ >PROTEIN PPL-2; SWP:NA; PDB:2GSJA; GGIVVYWGQNGGEGTLTSTCESGLYQIVNIAFLSQFGGGRRPQINLAGHCDPANNGCRTV -------------------1-----------------------------2------2--- SDGIRACQRRGIKVMLSIGGGAGSYSLSSVQDARSVADYIWNNFLGGRSSSRPLGDAVLD ------1----------------------------------------------------- GVDFDIEHGGAYYDALARRLSEHNRGGKKVFLSAAPQCPFPDQSLNKALSTGLFDYVWVQ -------------------------------------3---------------------- FYNNPQCEFNSGNPSNFRNSWNKWTSSFNAKFYVGLPASPEAAGSGYVPPQQLINQVLPF ------3----------------------------------------------------- VKRSPKYGGVMLWDRFNDLKTKYSSKIKPSV ------------------------------- >PHOSPHODIESTERASE-NUCLEOT; SWP:Q8PIS1; PDB:2GSOA; TPHALLLISIDGLRADMLDRGITPNLSHLAREGVRARWMAPSYPSLTFPNHYTLVTGLRP ------------------------------------------------------------ DHHGIVHNSMRDPTLGGFWLSKSEAVGDARWWGGEPVWVGVENTGQHAATWSWPGSEAAI ------------------------------------------------------------ KGVRPSQWRHYQKGVRLDTRVDAVRGWLATDGAQRNRLVTLYFEHVDEAGHDHGPESRQY ------------------------------------------------------------ ADAVRAVDAAIGRLLAGMQRDGTRARTNIIVVSDHGMAEVAPGHAISVEDIAPPQIATAI ------------------------------------------------------------ TDGQVIGFEPLPGQQAAAEASVLGAHDHYDCWRKAELPARWQYGSHPRIPSLVCQMHEGW ------------------------------1----------------------1------ DALFPDKLAKRAQRGTRGSHGYDPALPSMRAVFLAQGPDLAQGKTLPGFDNVDVYALMSR ------------------------------------------------------------ LLGIPAAPNDGNPATLLPALRM ---------------------- >PROACTIVATOR POLYPEPTIDE; SWP:P07602; PDB:2GTGA; DVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSI ---1--2---------------------------3----------3-------------- LLEEVSPELVCSMLHLCS ----------2-----1- >Hemoglobin linker chain L; SWP:Q9GV76; PDB:2GTLM; RFQYLVKNQNLHIDYLAKKLHDIEEEYNKLTHDVDKKTIRQLKARISNLEEHHCDEHESE -----------------------------------------------------1------ CRGDVPECIHDLLFCDGEKDCRDGSDEDPETCSLNITHVGSSYTGLATWTSCEDLNPDHA 2------1------3-----2----------3-------------------4-------- IVTITAAHRKSFFPNRVWLRATLSYELDEHDHTVSTTQLRGFYNFGKRELLLAPLKGQSE ------------------------------------------------------------ GYGVICDFNLGDDDHADCKIVVPSSLFVCAHFNAQRY -----5-----------5----------4-------- >Extracellular hemoglobin ; SWP:Q2I743; PDB:2GTLN; LDPRLGANAFLIIRLDRIIEKLRTKLDEAEKIDPEHFVSEIDARVTKIEGTHCEKRTFQC ----------------------------------------------------1------2 GGNEQECISDLLVCDGHKDCHNAHDEDPDVCDTSVVKAGNVFSGTSTWHGCLAREDHVTR ------1------3-----2----------3-------------------4--------- ITITASKRRKFFTARIWLRALVESELERHGENVTSSFNAKGYYNFASRRLILLPTDDHDD ------------------------------------------------------------ HLAVVCSFNRGDNERAECHRVTEATLHQCADLFVTLEEHD -----5-----------5----------4----------- >Extracellular hemoglobin ; SWP:Q2I742; PDB:2GTLO; QSHDEIIDKLIERTNKITTSISHVESLLDDRLDPKRIRKAGSLRHRVEELEDPSCDEHEH ------------------------------------------------------1----- QCGGDDPQCISKLFVCDGHNDCRNGEDEKDCTLPTKAGDKFIGDVCFDHCTKRRPEHMTL -2------1------3-----2--------3------------------4---------- AFESSSIAAFFTPIADLHVHIEIESETDEDESEVSMPADGEYSFADHRLTIHPPEEDGLG ------------------------------------------------------------ LVGEFDGYNFDRFVGHIVHELSEEVCAEFIFHRKK -------------------------4--------- >GLYCOPROTEIN B; SWP:P06437; PDB:2GUMA; ANFYVCPPPTGATVVQFEQPRRCPTRPEGQNYTEGIAVVFKENIAPYKFKATMYYKDVTV -----1----------------2------------------------------------- SQVWFGHRYSQFMGIFEDRAPVPFEEVIDKINAKGVCRSTAKYVRNNLETTAFHRDDHET ------------------------------------3----------------------- DMELKPANAATRTSRGWHTTDLKYNPSRVEAFHRYGTTVNCIVEEVDARSVYPYDEFVLA ----------------------------------------3------------------- TGDFVYMSPFYGYREGSHTEHTTYAADRFKQVDGFYARDLAPTTRNLLTTPKFTVAWDWV ------------------------------------------------------------ PKRPSVCTMTKWQEVDEMLRSEYGGSFRFSSDAISTTFTTNLTEYPLSRVDLGDCIGKDA ------4-----------------------------------------------4----- RDAMDRIFARRYNATHIKVGQPQYYQANGGFLIAYQPLLSNTVERIKTTSSIEFARLQFT ------------------------------------------------------------ YNHIQRHVNDMLGRVAIAWCELQNHELTLWNEARKLNPNAIASVTVGRRVSARMLGDVMA -------------------2---------------------------------------- VSTCVPVAADNVIVQNSMRISSRPGACYSRPLVSFRYEDQGPLVEGQLGENNELRLTRDA ---1----------------------5--------------------------------- IEPCTVGHRRYFTFGGGYVYFEEYAYSHQLSRADITTVSTFIDLNITMLEDHEFVPLEVY ---5-------------------------------------------------------- TRHEIKDSGLLDYTEVQRRNQLHDLRFADIDTVIHA ------------------------------------ >ALPHA-AMYLASE A; SWP:Q76CT3; PDB:2GUYA; ATPADWRSQSIYFLLTDRFARTDGSTTATCNTADQKYCGGTWQGIIDKLDYIQGMGFTAI -----------------------------1-------1---------------------- WITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVVA ------------------------------------------------------------ NHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQVEDCWLGDNTVSLPDLDTTK -----------------------------2-------------2---------------- DVVKNEWYDWVGSLVSNYSIDGLRIDTVKHVQKDFWPGYNKAAGVYCIGEVLDGDPAYTC -----------------------------------------------------------3 PYQNVMDGVLNYPIYYPLLNAFKSTSGSMDDLYNMINTVKSDCPDSTLLGTFVENHDNPR ------------------------------------------3----------------- FASYTNDIALAKNVAAFIILNDGIPIIYAGQEQHYAGGNDPANREATWLSGYPTDSELYK ------------------------------------------------------------ LIASANAIRNYAISKDTGFVTYKNWPIYKDDTTIAMRKGTDGSQIVTILSNKGASGDSYT ------------------------------------------------------------ LSLSGAGYTAGQQLTEVIGCTTVTVGSDGNVPVPMAGGLPRVLYPTEKLAGSKICS -------------------4----------------------------------4- >PROBABLE ACYLPHOSPHATASE; SWP:P0AB65; PDB:2GV1A; MSKVCIIAWVYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQ ----1-------------------------------------------1----------- WLKSGGPRSARVERVLSEPHHPSGELTDFRIR -------------------------------- >CHEMOSENSORY PROTEIN CSP-; SWP:O76476; PDB:2GVSA; EEKYTTKYDNVNLDEILANDRLLNKYVQCLLEDDESNCTADGKELKSVIPDALSNECAKC ----------------------------1--------1------------------2--2 NEKQKEGTKKVLKHLINHKPDVWAQLKAKYDPDGTYSKKYEDREKELHQ ------------------------------------------------- >MITOCHONDRIAL PRECURSOR P; SWP:P07213; PDB:2GW1A; EKDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKEDPVFYSNLSACYVSVGDLKKVVE ------------------------------------------------------------ MSTKALELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASIEPMLERNLNK ------------------------------------------------------------ QAMSKLKEKNLPSVTSMASFFGIFKPELTFANYDESNEADKELMNGLSNLYKRSPESYDK ------------------------------------------------------------ ADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIELF ------------------------------------------------------------ PRVNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDF ------------------------------------------------------------ DKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKND ------------------1----------1------------------------------ FDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPR ------------------------------------------------------------ SEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAAKVQQRIRSDPVL ------------------------------------------------------------ AKKIQET ------- >Leukocyte immunoglobulin-; SWP:Q8N423; PDB:2GW5A; IPKPTLWAEPDSVITQGSPVTLSCQGSLEAQEYRLYREKITRIRPELVKNGQFHIPSITW -----------------------1------------------------------------ EHTGRYGCQYYSRARWSELSDPLVLVMTGAYPKPTLSAQPSPVVTSGGRVTLQCESQVAF -------1---------------------------------------------2------ GGFILCKEQCLNSQPHARGSSRAIFSVGPVSPNRRWSHRCYGYDLNSPYVWSSPSDLLEL -----3---3-----------------------------2-------------------- LVPG ---- >GLUTAMATE CYSTEINE LIGASE; SWP:O23736; PDB:2GWDA; EPLTREDLIAYLASGCKSKEKWRIGTEHEKFGFEVNTLRPMKYDQIAELLNSIAERFEWE ------------------------------------------------------------ KVMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIG ---------------------------------------1-------------------- FLGMGFQPKWRREDIPTMPKGRYDIMRNYMPKVGSLGLDMMLRTCTVQVNLDFSSEADMI ------------------------------------------------------------ RKFRAGLALQPIATALFANSPFTEGKPNGFLSMRSHIWTDTDKDRTGMLPFVFDDSFGFE ------------------------------------------------------------ QYVDYALDVPMYFAYRNGKYVDCTGMTFRQFLAGKLPCLPGELPTYNDWENHLTTIFPEV ----------------------2--------------2---------------------- RLKRYMEMRGADGGPWRRLCALPAFWVGLLYDEDVLQSVLDLTADWTPAEREMLRNKVPV -------------------1---------------------------------------- TGLKTPFRDGLLKHVAEDVLKLAKDGLERRGYKEVGFLNAVTEVVRTGVTPAENLLEMYN ------------------------------------------------------------ GEWGQSVDPVFQELLY ---------------- >ANGIOPOIETIN-1 RECEPTOR; SWP:Q02763; PDB:2GY5A; AMDLILINSLPLVSDAETSLTCIASGWRPHEPITIGRDFEALMNQHQDPLEVTQDVTREW ---------------------1-------------------------------------- AKKVVWKREKASKINGAYFCEGRVRGEAIRIRTMKMRQQASFLPATLTMTVDKGDNVNIS -------------------1---------------------------------------- FKKVLIKEEDAVIYKNGSFIHSVPRHEVPDILEVHLPHAQPQDAGVYSARYIGGNLFTSA ------------------------------------------------------------ FTRLIVRRCEAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGR --------2--------2---3--4-----3------4-5--------5---6------- TCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEM -6---7-----7-----8------8-9--------9---a--------a---b-c----- CDRFQGCLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGKFNPICKASGWPLPTNEE b-----c-d--------d-----------------------------e------------ MTLVKPDGTVLHPKDFNHTDHFSVAIFTIHRILPPDSGVWVCSVNTVAGMVEKPFNISVK -----------------------------------------e------------------ VLP --- >CYTOKINE RECEPTOR COMMON ; SWP:Q6NSJ8; PDB:2GYSA; EETIPLQTLRCYNDYTSHITCRWADTQDAQRLVNVTLIRRVNEDLLEPVSCDLSDDMPWS ----------1---------1-----------------------------2--------- ACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLGTRLTVTLTQHVQPPEPRDLQISTD -3----3----2------------------------------------------------ QDHFLLTWSVALHWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYV ------------------------------------------------------------ ARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVA ----------------------------------------4---------4--------- SSVSFGLFYKPSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRA --------------------5----------------5---------------------- EKHIKSSVNIQMAPPSLQVTDSYSLRWETDHTFEIQYRKDTATWKDSKTETLQNAHSMAL ------------------------------------------------------------ PALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT ------------------------------------- >2H1; SWP:NA; PDB:2H1PH; DVKLVESGGGLVKLGGSLKLSCAASGFTFSSYFLSWVRQTPEKRLELVATINSNGDKTYH ---------------------1-------------------------------------- PDTMKGRFTISRDNAKNTLYLQMSSLKSEDTALYYCARRDSSASLYFDYWGQGTTLTVSS -----------------------------------1------------------------ AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSD --------------------------2--------------------------------- LYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR ---------------------2------------------ >T-CELL SURFACE GLYCOPROTE; SWP:P29016; PDB:2H26A; FQGPTSFHVIQTSSFTNSTWAQTQGSGWLDDLQIHGWDSDSGTAIFLKPWSKGNFSDKEV ------------------------------------------------------------ AELEEIFRVYIFGFAREVQDFAGDFQMKYPFEIQGIAGCELHSGGAIVSFLRGALGGLDF --------------------------------------1--------------------- LSVKNASCVPSPEGGSRAQKFCALIIQYQGIMETVRILLYETCPRYLLGVLNAGKADLQR -------2-------------2--------------------1----------------- QVKPEAWLSSGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQQGTQLGDILPNANWTW ----------------------3------------------------------------- YLRATLDVADGEAAGLSCRVKHSSLEGQDIILYWRNPI -----------------3-------------------- >Low affinity immunoglobul; SWP:P06734; PDB:2H2TB; CNTCPEKWINFQRKCYYFGKGTKQWVHARYACDDMEGQLVSIHSPEEQDFLTKRASHTGS 1--2----------2----------------3---------------------------- WIGLRNLDLKGEFIWVDGSHVDYSNWAPGEPTSDCVMMRGSGRWNDAFCDRKLGAWVCDR ----------------------------------4-------------4--------3-- LATC ---1 >DENMOTOXIN; SWP:Q06ZW0; PDB:2H5FA; VGLPHGFCIQCNRKTWSNCSIGHRCLPYHMTCYTLYKPDENGEMKWAVKGCARMCPTAKS -------1--2-------2-----3------1------------------3---4----- GERVKCCTGASCNSD -----45----5--- >LIVER CARBOXYLESTERASE 1; SWP:P23141; PDB:2H7CA; SSPPVVDTVHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNA ------------------------------------------------------------ TSYPPMCTQDPKAGQLLSELFTNRKENIPLKLSEDCLYLNIYTPADLTKKNRLPVMVWIH ------1----------------------------1------------------------ GGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRW ------------------------------------------------------------ VQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVALTSVLVKKGD ------------------------------------------------------------ VKPLAEQIAITAGCKTTTSAVMVHCLRQKTEEELLETTLKMKFLSLDLQGDPRESQPLLG -------------2----------2----------------------------------- TVIDGMLLLKTPEELQAERNFHTVPYMVGINKQEFGWLIPMLMSYPLSEGQLDQKTAMSL ------------------------------------------------------------ LWKSYPLVCIAKELIPEATEKYLGGTDDTVKKKDLFLDLIADVMFGVPSVIVARNHRDAG ------------------------------------------------------------ APTYMYEFQYRPSFSSDMKPKTVIGDHGDELFSVFGAPFLKEGASEEEIRLSKMVMKFWA ------------------------------------------------------------ NFARNGNPNGEGLPHWPEYNQKEGYLQIGANTQAAQKLKDKEVAFWTNLFAK ---------------------------------------------------- >CATHEPSIN S; SWP:P25774; PDB:2H7JA; ILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTE ----------------------1---------------------------------2--- KYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYG ------1--------------------------------2-------------------- REDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEY --------------------------------------3--------------------- WLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI --------------------------3----------- >IRDITOXIN; SWP:A0S864; PDB:2H7ZA; QAVGPPYTLCFECNRMTSSDCSTALRCYRGSCYTLYRPDENCELKWAVKGCAETCPTAGP ---------1--2-------2-----3----1------------------3---4----- NERVKCCRSPRCNDD -----45----5--- >Irditoxin subunit B [Prec; SWP:A0S865; PDB:2H7ZB; QAKGPPYTLCFECNRETCSNCFKDNRCPPYHRTCYTLYRPDGNGEMKWAVKGCAKTCPTA ---------1--2-------2-----3------1------------------3---4--- QPGESVQCCNTPKCNDY -------45----5--- >Anti-coagulant protein C2; SWP:Q16938_ANCCA; PDB:2H9EC; CGENEKYDDKKCKYDGVECVCEEGFYRNKDDKCVSAEDCELDNMDFIYPGTR 1----------2------1-3-----------3-----2------------- >ACETYLCHOLINESTERASE; SWP:P21836; PDB:2HA2A; EGREDPQLLVRVRGGQLRGIRLKAPGGPVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVL ------------------------------------------------------------ DATTFQNVCYQYVDTLYPGFEGTEMWNPNRELSEDCLYLNVWTPYPRPASPTPVLIWIYG --------1--------------------------1------------------------ GGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLAL ------------------------------------------------------------ QWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPNGPWATVS ------------------------------------------------------------ AGEARRRATLLARLVGCPNDTELIACLRTRPAQDLVDHEWHVLPQESIFRFSFVPVVDGD ----------------2--------2---------------------------------- FLSDTPEALINTGDFQDLQVLVGVVKDEGSYFLVYGVPGFSKDNESLISRAQFLAGVRIG ------------------------------------------------------------ VPQASDLAAEAVVLHYTDWLHPEDPTHLRDAMSAVVGDHNVVCPVAQLAGRLAAQGARVY ------------------------------------------3----------------- AYIFEHRASTLTWPLWMGVPHGYEIEFIFGLPLDPSLNYTTEERIFAQRLMKYWTNFART ------------------------------------------------------------ GDPNDPRDSKSPQWPPYTTAAQQYVSLNLKPLEVRRGLRAQTCAFWNRFLPKLLSA ------------------------------------------3------------- >HEPATITIS C VIRUS NS5B RN; SWP:P26663; PDB:2HAIA; SMSYTWTGALITPCAAEESKLPINALSNSLLRHHNMVYATTSRSAGQRQKKVTFDRLQVL ------------------------------------------------------------ DDHYRDVLKEMKAKASTVKAKLLSVEEACKLTPPHSAKSKYGYGAKDVRNLSSRAVNHIH ------------------------------------------------------------ SVWKDLLEDTVTPIDTTIMAKNEVFCVQPEKGGRKPARLIVFPDLGVRVCEKMALYDVVS ------------------------------------------------------------ TLPQVVMGSSYGFQYSPGQRVEFLVNTWKSKKNPMGFSYDTRFDSTVTENDIRVEESIYQ ------------------------------------------------------------ CCDLAPEARQAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKASA ------------------------------------------------------------ ACRAAKLQDCTMLVNGDDLVVICESAGTQEDAASLRVFTEAMTRYSAPPGDPPQPEYDLE -1-------1-------------------------------------------------- LITSSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARHTPVNSWLGNIIMYAPTLWAR ------------------------------------------------------------ MILMTHFFSILLAQEQLEKALDCQIYGACYSIEPLDLPQIIERLHGLSAFSLHSYSPGEI ------------------------------------------------------------ NRVASCLRKLGVPPLRVWRHRARSVRARLLSQGGRAATCGKYLFNWAVKTKLKLTPIPAA ------------------------------------------------------------ SQLDLSGWFVAGYSGGDIYH -------------------- >EGL NINE HOMOLOG 1; SWP:Q9GZT9; PDB:2HBTA; LPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDS -------------1------1--------------------------------------- SKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNG ------------------------------------------------------------ TGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFW ------------------------------------------------------------ SDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLKGVRVEL -------------------------------------------- >HUMAN CHEMOKINE HCC-2; SWP:Q16663; PDB:2HCC; HFAADCCTSYISQSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKK -----12---------3------------1---------------2----------3--- LKPYSI ------ >Expansin-B1 [Precursor]; SWP:P58738; PDB:2HCZX; KVPPGNITTNYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIF -------------------------------------1---------------------- KDGKGCGSCYEVRCKEKPECSGNPVTVYITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDK -----1--2----3-----3---------------------------------------- IRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLS ---------------2-------------------------------------------- AEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDVIPANWRPDAVYTSNVQF ------------------------------------------------------------ Y - >SMALL INDUCIBLE CYTOKINE ; SWP:NA; PDB:2HDLA; SKCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKR --1-2-----------------------1--------------------2---------- FIKWYNAWNEKRRVYEE ----------------- >KIF2C PROTEIN; SWP:Q99661; PDB:2HEHA; NWEFARMIKEFRATLECHPLTMTDPIEEHRICVCVRKRPLNKQELAKKEIDVISIPSKCL ------------------------------------------------------------ LLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYG -------------------------------------------------------1---- QTGSGKTHTMGKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKKAKL ------------------------------------------------------------ RVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRNSSRSHACFQIILRAKGRMHGKF ------------------------------------------------------------ SLVDLAGNEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIA --------------------------------------------------------1--- TISPGISSCEYTLNTLRYADRVKE ------------------------ >Tumor necrosis factor lig; SWP:P23510; PDB:2HEVF; RIQSIKVQFTEYKKEKGFILTSQKEDEIMKVQDNSVIINCDGFYLISLKGYFSQEVDISL ---------------------------------------1-------------------- HYQKDEEPLFQLKKVRSVNSLMVASLTYKDKVYLNVTTDNTSLDDFHVNGGELILIHQNP ------------------------------------------------------------ GEFCVL ---1-- >Tumor necrosis factor lig; SWP:P43488; PDB:2HEWF; PPIQRLRGAVTRCEDGQLFISSYKNEYQTMEVQNNSVVIKCDGLYIIYLKGSFFQEVKID ------------1---------------------------2------------------- LHFREDHNPISIPMLNDGRRIVFTVVASLAFKDKVYLTVNAPDTLCEHLQINDGELIVVQ ---------------------------------------------1-------------- LTPGYCAP -----2-- >Tumor necrosis factor rec; SWP:P43489; PDB:2HEYR; LHCVGDTYPSNDRCCHECRPGNGMVSRCSRSQNTVCRPCGPGFYNDVVSSKPCKPCTWCN --1----------12--3---------2-------3--4-------------4-----5- LRSGSERKQLCTATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHFSPGDNQACKPWTNCT ------------------5-6---------------6--7------------7------- LAGKHTLQPASNSSDAIC ------------------ >Probable hydrogenase nick; SWP:Q57884; PDB:2HF9A; KDILKANKRLADKNRKLLNKHGVVAFDFMGAIGSGKTLLIEKLIDNLKDKYKIACIAGDV ------------------------------------------------------------ IAKFDAERMEKHGAKVVPLNTGKECHLDAHLVGHALEDLNLDEIDLLFIENVGNLICPAD ------------------------1-------------------------------1--- FDLGTHKRIVVISTTEGDDTIEKHPGIMKTADLIVINKIDLADAVGADIKKMENDAKRIN ------------------------------------------------------------ PDAEVVLLSLKTMEGFDKVLEFIEKSVKEVK ------------------------------- >HUMAN TISSUE FACTOR; SWP:P13726; PDB:2HFT; SGTTNTVAAYNLTWKSTNFKTILEWEPKPVNQVYTVQISTKSGDWKSKCFYTTDTECDLT ------------------------------------------------1-------1--- DEIVKDVKQTYLARVFSYPAGNVESTEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVN ------------------------------------------------------------ VTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSGKKTAKTNTNEFLIDVDKGENYC -----------------------------------------------------------2 FSVQAVIPSRTVNRKSTDSPVECMG ----------------------2-- >Major prion protein [Prec; SWP:P10279; PDB:2HH0H; VQLLEQSGAELVKPGASVKLSCTASGFNIEDSYIHWVKQRPEQGLEWIGRIDPEDGETKY ---------------------1-------------------------------------- APKFQGKATITADTSSNTAYLHLRRLTSEDTAIYYCGRGAYYIKEDFWGQGTTLTVSSAS -----------------------------------1------------------------ TKGPSVFPLAPSSKAGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS ----------------------2------------------------------------- LSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPA ------------------2------------------ >Major prion protein [Prec; SWP:P10279; PDB:2HH0L; LVMTQTPSSLSASLGERVSLTCRASQDIGNNLNWIQQKPDGTIKRLIYATSSLDSGVPKR ---------------------1-------------------------------------- FSGSRSGSDYSLTISSLESEDFADYYCLQHDTFPLTFGGGTKLEIKRTVAAPSVFIFPPS --------------------------1--------------------------------- DEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTL ------------2----------------------------------------------- SKADYEKHKVYACEVTHQGLSSPVTKSFNR ------------2----------------- >IMMUNOGENIC PROTEIN MPT64; SWP:P0A5Q4; PDB:2HHIA; PKTYCEELKGTDTGQACQIQMSDPAYNINISLPSYYPDQKSLENYIAQTRDKFLSAATSS ----1-----------1------------------------------------------- TPREAPYELNITSATYQSAIPPRGTQAVVLKVYQNAGGTHPTTTYKAFDWDQAYRKPITY ------------------------------------------------------------ DTLWQADTDPLPVVFPIVQGELSKQTGQQVSIAPNAGLDPVNYQNFAVTNDGVIFFFNPG ------------------------------------------------------------ ELLPEAAGPTQVLVPRSAIDSMLA ------------------------ >FIMBRIAL PROTEIN; SWP:P02974; PDB:2HI2A; FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPEN ------------------------------------------------------------ NTSAGVASSPTDIKGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWF ------------------------------------------------------------ CGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFDAK 1-----------------------------1------- >SULFHYDRYL OXIDASE ERV1P; SWP:Q8LC15; PDB:2HJ3A; PVTKEDLGRATWTFLHTLAAQYPEKPTRQQKKDVKELMTILSRMYPCRECADHFKEILRS ----------------------------------------------1--1---------- NPAQAGSQEEFSQWLCHVHNTVNRSLGKLVFPCERVDARWG ---------------2----------------2-------- >RIBONUCLEASE 7; SWP:Q9H1E1; PDB:2HKYA; MKPKGMTSSQWFKIQHMQPSPQACNSAMKNINKHTKRCKDLNTFLHEPFSSVAATCQTPK -----------------------1-------------2-----------------3---- IACKNGDKNCHQSHGPVSLTMCKLTSGKYPNCRYKEKRQNKSYVVACKPPQKKDSQQFHL --4------4-----------1---------2--------------3------------- VPVHLDRVL --------- >BONE MORPHOGENETIC PROTEI; SWP:NA; PDB:2HLRA; ALCAFKDPYNGTILCSKGSTCYGLWNLVKQGCWSHIGDPQECHYEECVVTYRFCCCSTDL --1-----------2-----1----------2---------3----4------435---- CNVNFTE 5------ >PROTEIN DISULFIDE OXIDORE; SWP:Q9YDZ4; PDB:2HLSA; ARYYVLDLSEDFRRELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNG -------------------------------------1--1------------------- GKLLKLNVYYRESDSDKFSEFKVERVPTVAFLGGEVRWTGIPAGEEIRALVEVIMRLSED ------------------------------------------------------------ ESGLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVE ----------------------------2--2---------------------------- AYENPDIADKYGVMSVPSIAINGYLVFVGVPYEEDFLDYVKSAAEGRLTVKG ---------------------------------------------------- >HIV-1 REVERSE TRANSCRIPTA; SWP:NA; PDB:2HMIC; DIQMTQTTSSLSASLGDRVTISCSASQDISSYLNWYQQKPEGTVKLLIYYTSSLHSGVPS ----------------------1------------------------------------- AFSGSGSGTDYSLTISNLEPEDFATYYCQQYSKFPWTFGGGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVAWAIDGSAAANGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTADEYEAANSYTCAATHKTSTSPIVKSFNANEC -------------2-------------------- >ALLIIN LYASE 1; SWP:Q01594; PDB:2HOXA; KMTWTMKAAEEAEAVANINCSEHGRAFLDGIISEGSPKCECNTCYTGPDCSEKIQGCSAD -------------------1------------------1-2--3-----2------3--- VASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAA ------------------------------------------------------------ AKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGY ------------------------------------------------------------ VWAGNAANYVNVSNPEQYIEMVTSPNNPEGLLRHAVIKGCKSIYDMVYYWPHYTPIKYKA ------------------------------------------------------------ DEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEV ------------------------------------------------------------ VAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPS ------------------------------------------------------------ PSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDFDQLMYYLKD -------4-------4-------------------------------------------- MVKAK ----- >T-CELL SURFACE GLYCOPROTE; SWP:Q4ZG17; PDB:2HP4A; SQFRVSPLDRTWNLGETVELKCQVLLSNPTSGASWLFQPRGAAASPTFLLYLNQNKPKAA ---------------------1-------------------------------------- EGLDTQRFSGKRLGDTFVLTLSDFRRENEGYYFCSALSNSIMYFSHFVPVFLPA ---------------------------------1-------------------- >Coagulation factor II var; SWP:Q53H04; PDB:2HPQP; CVPDRGQQYQGRLAVTTHGLPCLAWASAQAKALSKHQDFNSAVQLVENFCRNPDGDEEGV 1--------------------2---------------------------3---------- WCYVAGKPGDFGYCDLNYC -2-----------3----1 >HYPOTHETICAL PROTEIN PH15; SWP:O59278_PYRHO; PDB:2HQ4A; GMQCEEKLEVFENGFKDEKFNVEVKFYGNDARKVLLAMIYELYLPEYGREYVYPFECAKE ---1----------------------------------------------------1--- FWNIYLEGEEIQDQLKPIKFTSEQVIKKLQEEIKKIKPPLEIKIEEAKIYKTKEGYLAVG ------------------------------------------------------------ NYFILDPRGRLFIFNKPSIANKILKYIWKW ------------------------------ >SEROLOGICALLY DEFINED COL; SWP:Q6UX04; PDB:2HQ6A; VPRGSEPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFI -----------------------------------------1------------------ VQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADE ------------------------------------------------------------ LNNKHTIFGKVTGDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNPFD -----------------------------------------1-------- >CONSERVED HYPOTHETICAL PR; SWP:Q8A1H2; PDB:2HQYA; MIPFKDITLADRDTITAFTMKSDRRNCDLSFSNLCSWRFLYDTQFAVIDDFLVFKFWAGE ------------------------------------------------------------ QLAYMMPVGNGDLKAVLRKLIEDADKEKHNFCMLGVCSNMRADLEAILPERFIFTEDRAY -------------------------------1---------------------------- ADYIYLRSDLATLKGKKFQAKRNHINRFRNTYPDYEYTPITPDRIQECLDLEAEWCKVNN -------------------------------------------------------2---- CDQQEGTGNERRALIYALHNFEALGLTGGILHVNGKIVAFTFGMPINHETFGVHVEKADT 2----------------------------------------------------------- SIDGAYAMINYEFANRIPEQYIYINREEDLGIEGLRKAKLSYQPVTILEKYMACLKDH -----------------------------------------------------1---- >COMPLEMENT C3 BETA CHAIN; SWP:P01024; PDB:2HR0A; SPMYSIITPNILRLESEETMVLEAHDAQGDVPVTVTVHDFPGKKLVLSSEKTVLTPATNH ------------------------------------------------------------ MTFTIPANRFKSEKGRNKFVTVQATFGTQVVEKVVLVSLQSGYLFIQTDKTIYTPGSTVL ------------------------------------------------------------ YRIFTVNHKLLPVGRTVMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKI ------------------------------------------------------------ RAYYENSPQQVFSTEFEVKEYVLPSFEVIVEPTEKFYYIYNEKGLEVTITARFLYGKKVE ------------------------------------------------------------ GTAFVIFGIQDGEQRISLPESLKRIPIEDGSGEVVLSRKVLLDGVQNLRAEDLVGKSLYV ------------------------------------------------------------ SATVILHSGSDMVQAERSGIPIVTSPYQIHFTKTPKYFKPGMPFDLMVFVTNPDGSPAYR ------------------------------------------------------------ VPVAVQGEDTVQSLTQGDGVAKLSINTHPSQKPLSITVRTKKQELSEAEQATRTMQALPY ------------------------------------------------------------ STVGNSNNYLHLSVLRTELRPGETLNVNFLLRMDRAHEAKIRYYTYLIMNKGRLLKAGRQ ------------------------------------------------------------ VREPGQDLVVLPLSITTDFIPSFRLVAYYTLIGASGQREVVADSVWVDVKDSCVGSLVVK ------------------------------------------------------------ SGQSEDRQPVPGQQMTLKIEGDHGARVVLVAVDKGVFVLNKKNKLTQSKIWDVVEKADIG ------------------------------------------------------------ CTPGSGKDYAGVFSDAGLTFTSSSGQQTAQRAELQCPQPAA 1----------------------------------1----- >INSULIN RECEPTOR; SWP:P06213; PDB:2HR7A; PGEVCPGMDIRNNLTRLHELENCSVIEGHLQILLMFKTRPEDFRDLSFPKLIMITDYLLL ----1-----------------1------------------------------------- FRVYGLESLKDLFPNLTVIRGSRLFFNYALVIFEMVHLKELGLYNLMNITRGSVRIEKNN ------------------------------------------------------------ ELCYLATIDWSRILDSVEDNHIVLNKDDNEECGDICPGTAKGKTNCPATVINGQFVERCW --2----------------------------2---3---------4------------3- THSHCQKVCPTICKSHGCTAEGLCCHSECLGNCSQPDDPTKCVACRNFYLDGRCVETCPP ----4---5---6----5-----67---8---7--------8--9--------9---a-- PYYHFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMNSSNLLCTP ---------a-----b------c-------c---------b---d------------d-- CLGPCPKVCHLLEGEKTIDSVTSAQELRGCTVINGSLIINIRGGNNLAAELEANLGLIEE e---e---f--------------------f------------------------------ ISGYLKIRRSYALVSLSFFRKLRLIRGETLEIGNYSFYALDNQNLRQLWDWSKHNLTITQ ------------------------------------------------------------ GKLFFHYNPKLCLSEIHKMEEVSGTKGRQERNDIALKTNGDKASCE -----------g--------------------------------g- >GLUTAREDOXIN-2; SWP:Q9NS18; PDB:2HT9A; LATAPVNQIQETISDNCVVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDA ----------------1------------------------------------------- LYKMTGERTVPRIFVNGTFIGGATDTHRLHKEGKLLPLVHQCYL -----------------------------------------1-- >NEURAMINIDASE; SWP:Q07599; PDB:2HTUA; TYMNNTEAICDAKGFAPFSKDNGIRIGSRGHIFVIREPFVSCSPIECRTFFLTQGSLLND -----------------------------------------1----1------------- KHSNGTVKDRSPFRTLMSVEVGQSPNV --------------------------- >HEVAMINE; SWP:P23472; PDB:2HVM; GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV -------------------1-----------------------------2------2--- SNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLD ------1----------------------------------------------------- GIDFDIEHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWV --------------------------------------3--------------------- QFYNNPPCQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRIL -------3---------------------------------------------------- PEIKKSPKYGGVMLWSKFYDDKNGYSSSILDSV --------------------------------- >GLUTAREDOXIN-1; SWP:GLRX1_ECTVM; PDB:2HZFA; QMAEEFVQQRLANNKVTIFVKYTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRD -----------------------1--1--------------------------------- YFEQITGGKTVPRIFFGKTSIGGYSDLLEIDNMDALGDILSSIGVLRT ------------------------------------------------ >PUTATIVE TETR TRANSCRIPTI; SWP:Q0RX74; PDB:2I10A; DDQVALQTAELFWRQGYEGTSITDLTKALGINPPSLYAAFGSKRDLFEKTLDRYCERTLQ ------------------------------------------------------1----- LEEAVRPTAHEAVLDFLTGRVEVFTGCTVQAGLASGEPHHEIVDLLTAAREQRQTVLDRF --------------------------1--------------------------------- EKALADGDLPAGTDCTALARYVAAVYGLSVEAASGAPREELTAAAILAAQVVP ----------------------------------------------------- >NICOTINATE PHOSPHORIBOSYL; SWP:Q9HJ28; PDB:2I1OA; MNVFNTASDEDIKKGLASDVYFERTISAIGDKCNDLRVAMEATVSGPLDTWINFTGLDEV --------------------------------1--------------------------- LKLLEGLDVDLYAIPEGTILFPRDANGLPVPFIRVEGRYCDFGMYETAILGFICQASGIS ---------------------------------------1-------------------- TKASKVRLAAGDSPFFSFGIRRMHPAISPMIDRSAYIGGADGVSGILGAKLIDQDPVGTM ------------------------------------------------------------ PHALSIMLGDEEAWKLTLENTKNGQKSVLLIDTYMDEKFAAIKIAEMFDKVDYIRLDTPS ------------------------------------------------------------ SRRGNFEALIREVRWELALRGRSDIKIMVSGGLDENTVKKLREAGAEAFGVGTSISSAKP ------------------------------------------------------------ FDFAMDIVEVNGKPETKRGKMSGRKNVLRCTSCHRIEVVPANVQEKTCICGGSMQNLLVK ------------------------------------------------------------ YLSHGKRTSEYPRPKEIRSRSMKELEYFK ----------------------------- >THIOREDOXIN; SWP:P0A616; PDB:2I1UA; SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD ------------------------------1--1-------------------------- TNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPN ------------------------------------------------ >NEW ANTIGEN RECEPTOR PBLA; SWP:NA; PDB:2I24N; RVDQTPQRITKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESISDGGRYVETVNR --------------------1------2-------------------------------- GSKSFSLRINDLTVKDSGTYRCKPESRYGSYDAVCAALNDQYGGGTVVTVNAA ---------------------1------------2------------------ >NEW ANTIGEN RECEPTOR ANCE; SWP:NA; PDB:2I27N; RVDQTPQTITKETGESLTINCVLRDSNCALSSTYWYRKKSGSTNEESISKGGRYVETVNS --------------------1------2-------------------------------- GSKSFSLRINDLTVEDSGTYRCKPESRDAECAALNDQYGGGTVVTVNAA ---------------------1--------2------------------ >THIOREDOXIN; SWP:A1YAC5; PDB:2I4AA; SEHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNI -------------------------------1--1------------------------- DDNPETPNAYQVRSIPTLMLVRDGKVIDKKVGALPKSQLKAWVESAQ ----------------------------------------------- >INSECT TOXIN 2; SWP:Q26292; PDB:2I61A; MDGYIKRRDGCKVACLIGNEGCDKECKAYGGSYGYCWTWGLACWCEGLPDDKTWKSETNT ----------1---2------3---4---------2------3-4--------------- CG 1- >HYPOTHETICAL PROTEIN; SWP:Q97YD5_SULSO; PDB:2I71A; GASIVFSTIGNPKGYQKVTYEIDGEKFESNVSVLALRDLLKVDKTVVILGISVADVYNCK ----------------------------------------------------------1- YADYRSCKECIIQNSKNDLGISESYVVAPNVYQKFKGKPDHYFTYIYYHSLRILEKEGIN ---------1-------------------------------------------------- EVFIDTTHGINYGVLAKEAIQLAVSAYAAKSEKEVKVSLYNSDPVGKDVSDTVKLHEIEA ------------------------------------------------------------ IKISPLSGLKYVTYQILNKDKNFFNKIFSDSVNAIPRFATALDNGLFIYLSEKDSSLHLK ------------------------------------------------------------ RLEDDLSKDPLLTPSENEINVVYKDKYALSHALFYVISRFSGNVDLDTLRHYAETYADKV ------------------------------------------------------------ TRAIIENEVDKIEKYQGSERKLLGEYRILYAHGGLPYAGTYVYKEKDKVYVTYGDKIDEI ------------------------------------------------------------ ERQI ---- >HYPOTHETICAL PROTEIN DIP2; SWP:Q6NEK4; PDB:2I8GA; VHDSALPFDALPPPQGREGFEECPYLDSQWVADTNGQRTGQGVDTRFDTPACVFWSYPEA ----------------------1----------------------------1-------- PQATVVRHPSEEEAIRVVDWAAPIDTTEPAEEPDGWSGGRAGHEEGAVYAVQKGPVAVVV ------------------------------------------------------------ WSNQQQSLKAELAKEAIARLGL ---------------------- >UROKINASE-TYPE PLASMINOGE; SWP:P00749; PDB:2I9AA; NCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGNGHFYRGKASTDTMGR -1-2-----1-----------2-3--------3-------4------------------- PCLPWNSATVLQQTYHAHRSDALQLGLGKHNYCRNPDNRRRPWCYVQVGLKPLVQECMVH -5------------------------------6----------5------------6--- DCA -4- >Azurin; SWP:P00281; PDB:2IAAC; ACDVSIEGNDSMQFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVAT -1----------------------1----------------------------------- DGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWSIM ------------------------------------------------------------ KGTIELGS -------- >HEMAGGLUTININ; SWP:Q6DQ34; PDB:2IBXA; DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRDCSVAGW -----------------------------------------1------------2----- LLGNPMCDEFINVPEWSYIVEKANPVNDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKS ------2----------------------3------------------------------ SWSSHEASLGVSSACPYQGKSSFFRNVVWLIKKNSTYPTIKRSYNNTNQEDLLVLWGIHH --------------3--------------------------------------------- PNDAAEQTKLYQNPTTYISVGTSTLNQRLVPRIATRSKVNGQSGRMEFFWTILKPNDAIN ------------------------------------------------------------ FESNGNFIAPEYAYKIVKKGDSTIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIG ---------------------------------1---4---------------------- ECPKYVKSNRLVLATGLRNSP -4------------------- >V-set and immunoglobulin ; SWP:Q9Y279; PDB:2ICCA; GRPILEVPESVTGPWKGDVNLPCTYDPLQGYTQVLVKWLVQRGSDPVTIFLRDSSGDHIQ ----------------------1------------------------------------- QAKYQGRLHVSHKVPGDVSLQLSTLEMDDRSHYTCEVTWQTPDGNQVVRDKITELRVQK ----------------------------------1------------------------ >T-cell receptor beta chai; SWP:TVB5_MOUSE; PDB:2ICWJ; EAAVTQSPRNKVAVTGEKVTLSCNQTNNHNNMYWYRQDTGHELRLIHYSYGAGSTEKGDI ----------------------1------------------------------------- PDGYKASRPSQENFSLILESATPSQTSVYFCASGGGGTLYFGAGTRLSVLSSA ------------------------------1---------------------- >LEUCINE RICH REPEAT NEURO; SWP:Q96FE5; PDB:2ID5A; TGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEE --1---2-1--------2------------------------------------------ LELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILL ------------------------------------------------------------ DYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIV ------------------------------------------------------------ LRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVP ------------------------------------------------------------ YLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRV ------------------------------------------------------------ LNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP ---------------------------------3-4--------------------3--- EFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWL ---------------------4------------------------5------------- SPRKHLVLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRS ------------------------------5------------------- >UNCHARACTERIZED PROTEIN C; SWP:Q8TX89; PDB:2IECA; LSDRERAIFEAGITLGAIYHQFCGTPVSPGTAEEVAKCIERAALLQPCVIDARVEVDVSS -----------------------------------------------1------------ EDTDNYGGYTEVSGRNLRVTIVTRCGEWEAVGKLEFIEELNYPLMWVEEIRRV ------------------------1---------------------------- >MUSCLE-SPECIFIC KINASE RE; SWP:Q62838; PDB:2IEPA; LPKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQL -------------------------1---------------------------------- LTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCT --------------21------------2-----------------------------3- TMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKL ----------------------------------------------3------------- VKLEVEV ------- >SLAM FAMILY MEMBER 6; SWP:Q96DU3; PDB:2IF7A; LTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGK ------------------------------------------------------------ RLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQNMTC -----------------------------------------------------------1 ELHLTCSVEDADDNVSFRWEALGNTLSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFS -----2-----------------------------------------2------------ VSAQKLCE ------1- >THIOREDOXIN; SWP:THIO_HUMAN; PDB:2IFQA; MVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVD -------------------------------1--1------------------------- DCQDVASEEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINELV -------------------------------------------- >HYPOTHETICAL PROTEIN; SWP:NA; PDB:2IGSA; INIYQNPGQSLANIYKGFARQCNPGFVFPEAQTIEAWDIPLRLHPEFIPGGDISKADQQY ---------------------1-------------------------------------- STLLAQEIANGVTIGFRVNEKERVCNVEILPLLTSAQNLDRIKARFGSGYLDRFKGSPNV ------------------------1----------------------------------- YPTDVGFSTDASGGISQESGLLVSYGVNLRTLTPGTWQATLPEDIKALVGPGVGLRLDAP ------------------------------------------------------------ NFSDVFNTIKSGLRYTTAVTLLLAYFAAIGS ------------------------------- >FAB HEAVY CHAIN; SWP:Q99LC4; PDB:2IH3A; QVQLQQPGAELVKPGASVKLSCKASGYTFTSDWIHWVKQRPGHGLEWIGEIIPSYGRANY ---------------------1-------------------------------------- NEKIQKKATLTADKSSSTAFMQLSSLTSEDSAVYYCARERGDGYFAVWGAGTTVTVSSAK -----------------------------------1------------------------ TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLY ------------------------2----------------------------------- TLSSSVTVPSSSWPSETVTCNVAHPASSTKVDKKIVPRD -------------------2------------------- >Igk-C protein; SWP:Q58EU4; PDB:2IH3B; DILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPS ----------------------1------------------------------------- RFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRN -------------2------------------ >LACCASE-1; SWP:Q70KY3; PDB:2IH8A; EPTCNTPSNRACWSDGFDINTDYEVSTPDTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLI ---1-------1------------------------------------------------ NGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKG -----------------------------------------------------2------ GQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPASLPYDIDLGVFPITDYYYRAA ------------------------------------------------------------ DDLVHFTQNNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQV ------------------------------------------------------------ SLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGG ---------------------------------------------------------3-- SLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVKRPDNTLP -------------------------------3---------------------------- VALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIE ------------------------------------------------------------ NDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTM ------------------------------------------------------------ LPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQRISQEDEDDFNRVC -----------------------------------------------------------2 DEWRAYWPTNPYPKIDSGL ------------------- >JAPANESE QUAIL EGG WHITE ; SWP:P00701; PDB:2IHL; KVYGRCELAAAMKRHGLDKYQGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINS -----1-----------------------2------------------------------ RWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDVHGMNAWVAWRNRCKGTDV ---3-----------4---3-------------4--------------------2----- NAWIRGCRL ------1-- >L-AMINO-ACID OXIDASE; SWP:P81382; PDB:2IIDA; RNPLAECFQENDYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLE ------1----------------------------------------------------- ASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLNEFSQENDNAWYFI ------------------------------------------------------------ KNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRTNCSYILNKYDTY -------------------------------------------------1---------- STKEYLIKEGDLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIFAYEKRFDEIVDGMDKL ------------------------------------------------------------ PTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRLIK ------------------------------------------------------------ FNPPLLPKKAHALRSVHYRSGTKIFLTCTTKFWEDDGIHGGKSTTDLPSRFIYYPNHNFT ---------------------------2-------------------------------- NGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLPKKDIQSFCYPSVIQKWSLD ------------------------------------------------2----------- KYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLA ------------------------------------------------------------ SEN --- >INTERLEUKIN-10; SWP:P22301; PDB:2ILK; TQSENSCTHFPGNLPNMLRDLRDAFSRVKTFFQMKDQLDNLLLKESLLEDFKGYLGCQAL ------1-------------------------------------------------2--- SEMIQFYLEEVMPQAENQDPDIKAHVNSLGENLKTLRLRLRRCHRFLPCENKSKAVEQVK ------------------------------------------1-----2----------- NAFNKLQEKGIYKAMSEFDIFINYIEAYMTMKIRN ----------------------------------- >HYPOTHETICAL PROTEIN; SWP:Q5ZY11; PDB:2IM9A; NSAAIEEQANSSIRKLYHTLNTTSMADRISQISAYFKGTKYILGSLGEGPNARYDQFPRY ------------------------------------------------------------ RVDGFDCDTYVNTVLSLALANSLESFQECLKHTRYKNGKRSYINRNHFTSIDWNNYNQKR ----------------------------1------------------------------- GLLKDITFSIRNEKKQPVALYANALINKPQWYNHKTIDTIRLQKQDKNEQEKRLVELKAK ------------------------------------------------------------ GKTLETSLSNVPYIPFTALFSENKPNLHLFSQIPNGAVIEIIRPNWDLRQQIGTELDISH ------------------------------------------------------------ LGFAIWINNELFFRQASSQYGKVVDVSLIDYLDKARSSPTIKGINIQVVLPEKPVCQLF -------------------------------------------------------1--- >CLASS A NONSPECIFIC ACID ; SWP:Q934J6; PDB:2IPBA; MQPFHSPEESVNSQFYLPPPPGNDDPAFRYDKEAYFKGYAIKGSPRWKQAAEDADISVEN ------------------------------------------------------------ IARIFSPVVGAKINPKDTPETWNMLQNLLKMGGYYATASAKKYYMRTRPFVLFNHSTCRP ---------------------------------------------------------1-- EDENTLRKDGSYPSGHDAYSTLLALVLSQARPERAQELARRGWEFGQSRVICGAHWQSDV ---------------------------------------------------1-------- DAGRYVGAVEFARLQTIPAFQKSLAKVREELNDKNNLLS --------------------------------------- >mitogen-activated protein; SWP:Q7QD46; PDB:2IRMA; SWTDDLKVCNQTGVGEAINQIYKDDGRRCEGYESRDKKCLCISDNNTSLYAILSGHNGVT --------------------------------------1-1------------------- VAENALQEMAAELLLGQLNVCNTDEAVKELIRQSFMSVEKGYFDSINPHVATKTAIQLHL ------------------------------------------------------------ SVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHN ------------------------------------------------------------ LLNAEEAARLFRLGLMAQNFEGVPLYSTRCIGNYLGKAGYKDCNFLSSATAEPVIFEPEI ------------------------------------------------------------ VGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQNQSTLGGVAQSV ------------------------------------------------------------ VHRIVQAHHDTYMQLVEEHRSVTFNSRDDVTLLIRNFNY --------------------------------------- >CHITIN DEACETYLASE; SWP:Q6DWK3; PDB:2IW0A; VPVGTPILQCTQPGLVALTYDDGPFTFTPQLLDILKQNDVRATFFVNGNNWANIEAGSNP ---------1-------------------------------------------------- DTIRRMRADGHLVGSHTYAHPDLNTLSSADRISQMRQLEEATRRIDGFAPKYMRAPYLSC -----------------------------------------------------------2 DAGCQGDLGGLGYHIIDTNLDTKDYENNKPETTHLSAEKFNNELSADVGANSYIVLSHDV ---2-------------------------------------------------------- HEQTVVSLTQKLIDTLKSKGYRAVTVGECLGDAPENWYKAHHHHHH ----------------------------1----------------- >GLUTAMINE CYCLOTRANSFERAS; SWP:O81226; PDB:2IWAA; RPSSRVYIVEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIH ------------------------------------------------------------ KMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILY ------------------------------------------------------------ GSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAK ----------------------------------------------------1------- DGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVRH ------------------------------------------------------------ RIPDGYIERHCLNL ----------1--- >SUBA; SWP:Q6EZC2; PDB:2IY9A; KPWYFDAIGLTETTMSLTDKNTPVVVSVVDSGVAFIGGLSDSEFAKFSFTQDGSPFPVKK ------------------------------------------------------------ SEALYIHGTAMASLIASRYGIYGVYPHALISSRRVIPDGVQDSWIRAIESIMSNVFLAPG ------------------------------------------------------------ EEKIINISGGQKGVSASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYH ------------------------------------------------------------ PVSSVNKKQDPVIRVAALAQYRKGETPVLHGGGITGSRFGNNWVDIAAPGQNITFLRPDA ------------------------------------------------------------ KTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSLVDKVTEGRVLNA ------------------------1----------------------------------- EKAISMFCK -------1- >BETA-MICROSEMINOPROTEIN; SWP:P08118; PDB:2IZ3A; SCYFIPNEGVPGDSTRKCMDLKGNKHPINSEWQTDNCETCTCYETEISCCTLVSTPVGYD -1---------------2------------------3--4-2------41---------- KDNCQRIFKKEDCKYIVVEKKDPKKTCSVSEWII ---5--------3-------------5------- >BETA-MICROSEMINOPROTEIN; SWP:O02826; PDB:2IZ4A; QCYFIPNQSLKPNECQDLKGVSHPLNSVWKTKDCEECTCGQDAISCCNTAAIPTGYDTNK -1------------2------------------3--4-2------41------------- CQKILNKKTCTYTVVEKKDPGKTCDVTGWVL 5--------3-------------5------- >Metalloproteinase inhibit; SWP:P01033; PDB:2J0TD; CTCVPPHPQTAFCNSDLVIRAKFVGTPEVNQTTLYQRYEIKMTKMYKGFQALGDAADIRF 1-2---------3----------------------------------------------- VYTPAMESVCGYFHRSHNRSEEFLIAGKLQDGLLHITTCSFVAPWNSLSLAQRRGFTKTY ---------1----------------------------2--------------------- TVGC ---3 >FICOLIN-2; SWP:Q6IS69; PDB:2J1GA; GPRTCKDLLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWA ----1---------------------------1--------------------------- TYKQGFGSRLGEFWLGNDNIHALELRTDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAF ------------------------------------------------------------ VEGSAGDSLTFSTKDQDNDLNTGNCAVMFQGAWWYHTSNLNGRYLRGTHGSFANGINWKS ------------------------------------------------------------ GKGYNYSYKVSEMKVRP ----------------- >THIOREDOXIN; SWP:NA; PDB:2J23A; GSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDV ------------------------------1--1-------------------------- DEQSQIAQEVGIRAMPTFVFFKNGQKIDTVVGADPSKLQAAITQHSA ----------------------------------------------- >CHAPERONE PROTEIN PAPD; SWP:P15319; PDB:2J2ZA; AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLE ------------------------------------------------------------ PGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAI ------------------------------------------------------------ KTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQT ------------------------------------------------------------ VKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKE --------------------------1----1----- >PAP fimbrial minor pilin ; SWP:P07111; PDB:2J2ZB; RAAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQNGFSGPERKFSLRLRNCEFNSQGGN ------------1--------------------------------------1-------- LFSDSRIRVTFDGVRGETPDKFNLSGQAKGINLQIADVRGNIARAGKVMPAIPLTGNEEA ------------------------------------------------------------ LDYTLRIVRNGKKLEAGNYFAVLGFRVDYE ------------------------------ >ANGIOGENIN-4; SWP:Q80Z85; PDB:2J4TA; NERYEKFLRQHYDAKPQGRDDRYCESMMKERKLTSPCKDVNTFIHGTKKNIRAICGKKGS -----------------------1------------2-----------------3----- PYGENFRISNSPFQITTCTHSRGSPWPPCGYRAFKDFRYIVIACEDGWPVHFDESFISP -----------------1----------2--------------3--------------- >Putative uncharacterized ; SWP:Q5XFY8; PDB:2J4WL; SVLSQSPAILSASPGEKVTMTCRARSSVSYMHWYQQKSGSSPKPWIHATSNLASGVPARF ---------------------1-------------------------------------- SGSGSGTSYSLTISRVEAEDAATYYCQQWSSHPPTFGSGTKLEIKRADAAPTVSIFPPSS -------------------------1---------------------------------- EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT -----------2------------------------------------------------ KDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -----------2-------------------- >APICAL MEMBRANE ANTIGEN 1; SWP:Q9BIM8; PDB:2J5LA; IFISDDKDSLKCPCDPEMVSQSTCRFFVCKCVER -----------1-2--------------1-2--- >CERULOPLASMIN; SWP:CERU_HUMAN; PDB:2J5WA; KEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDET ------------------------------------------------------------ FRTTIEKPVWLGFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNT ------------------------------------------------------------ TDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLII ----------------------------------1------------------------- CKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQQSNRM 1----------------------------------------------------------- YSVNGYTFGSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTNKNYRIDTINLFPA ----------------2------------------------------------------- TLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQECNKSSSKDNIRGKHVRHYYIAAE -------------------------------------2---------------------- EIIWNYAPSGIDIFTKENLTAPGSDSAVFFEQGTTRIGGSYKKLVYREYTDASFTNRKER ------------------------------------------------------------ GPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNVPPSA ------------------------------------------------------------ SHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGSLH ---------------------------3-------------------------3------ ANGRQKDVDKEFYLFPTVFDENESLLLEDNIRMFTTAPDQVDKEDEDFQESNKMHSMNGF ------------------------------------------------------------ MYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERRDTANLFPQTSLTLH ----------4------------------------------------------------- MWPDTEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYS -------------------------------4---------------------------- PQREWEKELHHLQEQNVSNAFLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLG ------------------------------------------------------------ ILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESSTVTPTLPGETLTYVWKIPERSG ------------------------------------------------------------ AGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPNPRRKLEFALLFLVFDENESWYL -------5-------------------------5-------------------------- DDNIKTYSDHPEKVNKDDEEFIESNKMHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEI ------------------------------------------------------------ DLHTVHFHGHSFQYKHRGVYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGME ------------------------------------------------------------ TTYTVLQNE --------- >FICOLIN-3; SWP:O75636; PDB:2J5ZA; CQEGPRNCRELLSQGATLSGWYHLCLPEGRALPVFCDMDTEGGGWLVFQRRQDGSVDFFR 1------2----------------1----------2------------------------ SWSSYRAGFGNQESEFWLGNENLHQLTLQGNWELRVELEDFNGNRTFAHYATFRLLGEVD ------------------------------------------------------------ HYQLALGKFSEGTAGDSLSLHSGRPFTTYDADHDSSNSNCAVIVHGAWWYASCYRSNLNG ---------------------------------------3------------3------- RYAVSEAAAHKYGIDWASGRGVGHPYRRVRMMLR ---------------------------------- >CONKUNITZIN-S2; SWP:NA; PDB:2J6DA; ARPKDRPSYCNLPADSGSGTKPEQRIYYNSAKKQCVTFTYNGKGGNGNNFSRTNDCRQTC ---------1------------------------2--------------------2---1 QYPVG ----- >SERINE/THREONINE-PROTEIN ; SWP:O94804; PDB:2J7TA; HVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIEEELEDYIVEIEILATC ------------------------------------------------------------ DHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL ------------------------------------------------------------ HSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKIGTPYWMAPEVVMCETMKDT -----------------------------------------------------1------ PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLK ------------------------------------------------------------ IALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKAEVMEE --------------------------------------------- >STIV B116; SWP:Q6Q0K9; PDB:2J85A; GKVFLTNAFSINLKEFPTTITIDKLDEEDFCLKLELRLEDGTLINAIGHDSTINLVNTLC ------------------------------1----------------------------1 GTQLQKNRVEVKNEGDEALIIISQRLEEGKVLSDKEIKDYRQGKISFYEVWHHH ------------------------------------------------------ >T-CELL SURFACE GLYCOPROTE; SWP:A0N0P4; PDB:2JA4A; AFQPKVQSRLVGGSSICEGTVEVRQGAQWAALCDSSSARSSLRWEEVCREQQCGSVNSYR ----------------1---------------2--------------3----1------- VLDAGDPTSRGLFCPHQKLSQCHELWERNSYCKKVFVTCQD -------------4-------4---------2------3-- >EXODEOXYRIBONUCLEASE III; SWP:Q9K100; PDB:2JC4A; MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK ------------------------------------------------------------ TYNGVAIVSRSVPQDVHFGLPALPDDPQRRVIAATVSGVRVINVYCVNGEALDSPKFKYK ------------------------------------------------------------ EQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWFQNLL -----------------------------------1-----------1------------ DLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDLETRA ------------------------------------------------------------ LERPSDHAPVTAEFDW ---------------- >CD44 ANTIGEN; SWP:Q3U8S1; PDB:2JCQA; QIDLNVTCRYAGVFHVEKNGRYSISRTEAADLCQAFNSTLPTMDQMKLALSKGFETCRYG -------1------------------------2-----------------------3--- FIEGNVVIPRIHPNAICAANHTGVYILVTSNTSHYDTYCFNASAPPEEDCTSVTDLPNSF ----------------3---------------------2----------1---------- DGPVTITIVNRDGTRYSKKGEYRTHQEDID ------------------------------ >LAMININ SUBUNIT ALPHA-1; SWP:P19137; PDB:2JD4A; APLAQPELCAVDTAPGYVAGAHQFGLSQNSHLVLPLQQSDVRKRLQVQLSIRTFASSGLI --------1--------------------------------------------------- YYVAHQNQMDYATLQLQEGRLHFMFDLGKGRTKVSHPALLSDGKWHTVKTEYIKRKAFMT ------------------------------------------------------------ VDGQESPSVTVVGKATTLDVERKLYLGGLPSHYRARNIGTITHSIPACIGEIMVNGQQLD -----------------------------------------------2------------ KDRPLSASAVDRCYVVAQEGTFFEGSGYAALVKEGYKVRLDLQITLEFRTTSKNGVLLGI ------------2----------------------------------------------- SSAKVDAIGLEIVDGKVLFHVNNGAGRITATYQPRAARALCDGKWHTLQAHKSKHRIVLT ----------------------------------------1------------------- VDGNSVRAEHSTSADTNDPIYVGGYPAHIKQNSLSSRASFRGCVRNLRLSQVQSLDLSRA ------------------------------------------3----------------- FDLQGVFPHSCPGPEP ----------3----- >COMPLEMENT FACTOR H; SWP:P08603; PDB:2JGWA; LRKCYFPYLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENGWSPTPRCIRV ---1--------------------------2--------------1----------2--- K - >CORTICOTROPIN-RELEASING F; SWP:Q60748; PDB:2JNCA; YCHRTTIGNFSGPYTYCNTTLDQIGTCWPQSAPGALVERPCPEYFNGIKYNTTRNAYREC -1--------------2---------1-------------3------------------2 LENGTWASRVNYSHCEPI --------------3--- >Ig lambda chain V-II regi; SWP:P01709; PDB:2MCG1; SALTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHAGKAPKVIIYEVNKRPSGVP --------------------1--------------------------------------- DRFSGSKSGNTASLTVSGLQAEDEADYYCSSYEGSDNFVFGTGTKVTVLGQPKANPTVTL ----------------------------1------------------------------- FPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSY ----------------2------------------------------------------- LSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS ---------------2------------------- >MACROMOMYCIN; SWP:P01549; PDB:2MCM; APGVTVTPATGLSNGQTVTVSATGLTPGTVYHVGQCAVVEPGVIGCDATTSTDVTADAAG -----------------------------------1---------1-------------- KITAQLKVHSSFQAVVGADGTPWGTVNCKVVSCSAGLGSDSGEGAAQAITFA ---------------------------2----2------------------- >Genome polyprotein; SWP:P12296; PDB:2MEV3; SPIPVTIREHAGTWYSTLPDSTVPIYGKTPVAPANYMVGEYKDFLEIAQIPTFIGNKVPN ------------------------------------------------------------ AVPYIEASNTAVKTQPLAVYQVTLSCSCLANTFLAALSRNFAQYRGSLVYTFVFTGTAMM -------------------------1-1-------------------------------- KGKFLIAYTPPGAGKPTSRDQAMQATYAIWDLGLNSSYSFTVPFISPTHFRMVGTDQANI ------------------------------------------------------------ TNVDGWVTVWQLTPLTYPPGCPTSAKILTMVSAGKDFSLKMPISPAPWSPQ --------------------------------------------------- >MANNOSE-BINDING PROTEIN-A; SWP:Q9Z294; PDB:2MSBA; KKFFVTNHERMPFSKVKALCSELRGTVAIPRNAEENKAIQEVAKTSAFLGITDEVTEGQF -------------------1---------------------------------------- MYVTGGRLTYSNWKKDEPNDHGSGEDCVTIVDNGLWNDISCQASHTAVCEFP --------------------------2-------------2-------1--- >GTP BINDING PROTEIN (G25K; SWP:P25763; PDB:2NGRA; MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG ------------------------------------------------------------ QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR --------------------------------------------1--------------- DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP ------------------------------------------------------------ EPKKSRRCVLL -------1--- >ENDOGLUCANASE; SWP:Q54331; PDB:2NLRA; DTTICEPFGTTTIQGRYVVQNNRWGSTAPQCVTATDTGFRVTQADGSAPTNGAPKSYPSV ----1-------------------------1----------------------------- FNGCHYTNCSPGTDLPVRLDTVSAAPSSISYGFVDGAVYNASYDIWLDPTARTDGVNQTE ---2----2--------------------------------------------------- IMIWFNRVGPIQPIGSPVGTASVGGRTWEVWSGGNGSNDVLSFVAPSAISGWSFDVMDFV ------------------------------------------------------------ RATVARGLAENDWYLTSVQAGFEPWQNGAGLAVNSFSSTVET ------------------------------------------ >CMRF35-LIKE-MOLECULE 1; SWP:Q8TDQ1; PDB:2NMSA; GIPQITGPTTVNGLERGSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKR ----------------------1-------------2-------2--------------- DRVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIEKTGNDLGVTVQVTIDPAP ------------------------------1--------------------- >SUPEROXIDE DISMUTASE [CU-; SWP:P00441; PDB:2NNXA; ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSA --------------------------------------------------------1--- GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVH ------------------------------------------------------------ EKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ -------------------------1------- >PHOSPHOLIPASE A2; SWP:P00609; PDB:2NOTA; NLVQFSYLIQCANHGRRPTRHYMDYGCYCGWGGSGTPVDELDRCCKIHDDCYSDAEKKGC ----------1---------------2-3--------------43-----5--------6 SPKMSAYDYYCGENGPYCRNIKKKCLRFVCDCDVEAAFCFAKAPYNNANWNIDTKKRCQ ----------1------7------6----7-5------4------------------2- >Coxsackievirus and adenov; SWP:Q5R764; PDB:2NPLX; GSSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSDSQKMPTSWLAEMTSSVISV ------1---------------2------------------------------------- KNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNK ------------2----------1------------ >MEROZOITE SURFACE PROTEIN; SWP:Q26183; PDB:2NPRA; TMSSEHTCIDTNVPDNAACYRYLDGTEEWRCLLTFKEEGGKCVPASNVTCKDNNGGCAPE -------1----------1-----------2----------2-------3------4--- AECKMTDSNKIVCKCTKEGSEPLFEGVFCS --3---------4-5-------------5- >5-methyltetrahydropteroyl; SWP:Q8CWX6; PDB:2NQ5A; LTKVSSLGYPRLGENREWKKLIEAYWAGKVSKNDLFAGAKELRLDFLKKQLNAGLDLIPV ------------------------------------------------------------ GDFSLYDHILDLSVQFNIIPKRFAKEPIDIDLYFAIARGNKENVASSMKKWFNTNYHYIV ------------------------------------------------------------ PEWSKQRPKLNNNRLLDLYLEAREVVGDKAKPVITGPITYVALSTGVEDFTAAVKSLLPL ------------------------------------------------------------ YKQVFTELVKAGASYIQVDEPIFVTDEGKDYLQAAKAVYAYFAKEVPDAKFIFQTYFEGL ------------------------------------------------------------ IDSQVLSQLPVDAFGLDFVYGLEENLEAIKTGAFKGKEIFAGVIDGRNIWSSDFVKTSAL ------------------------------------------------------------ LETIEEQSAALTIQPSCSLLHVPVTTKNETDLDPVLRNGLAFADEKLTEVKRLAEHLDGR ------------------------------------------------------------ EDPAYDLHIAHFDALQAADFRNVKLEDLSRVATKRPSDFAKRRDIQQEKLHLPLLPTTTI ------------------------------------------------------------ GSFPQDAEYKQFIQAEIERWIRIQEDLDLDVLVHGEFERVDMVEFFGQKLAGFTTTKFGW ------------------------------------------------------------ VQSYGSRAVKPPIIYGDVQHLEPITVEETVYAQSLTDRPVKGMLTGPITITNWSFERTDI ------------------------------------------------------------ PRDQLFNQIGLAIKDEIKLLENAGIAIIQVDEAALREGLPLRKSKQKAYLDDAVHAFHIA ------------------------------------------------------------ TSSVKDETQIHTHMCYSKFDEIIDAIRALDADVISILGIGLGVYDIHSPRVPTKEEVVAN --------------1--------------------------------------------- IERPLRQLSPTQFWVNPDCGLKTRQEPETIAALKVLVAATKEVRQK ------------------1--------------------------- >GLUCOSYLCERAMIDASE; SWP:P04062; PDB:2NT0A; ARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANH ---1-----------1-2----2------------------------------------- TGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIR ------------------------------------------------------------ VPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWT ------------------------------------------------------------ SPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGL ------------------------------------------------------------ LSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPE ------------------------------------------------------------ AAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRG ------------------------------------------------------------ MQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHL ------------------------------------------------------------ GHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFL ------------------------------------------------------------ ETISPGYSIHTYLWHRQ ----------------- >Ubiquinol-cytochrome c re; SWP:Q3IY09; PDB:2NVGA; LASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAG ------------------------------------------------------------ AEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGAHYDSAGRIRKGP ---------------------------1----------------1--------------- APENLPIPLAKFIDETTIQLG --------------------- >ELS4 TCR ALPHA CHAIN; SWP:Q6P4G7; PDB:2NW2A; QNIDQPTEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRFS --------------------1--------------------------------------- SFLSRSKGYSYLLLKELQMKDSASYLCAVQAGGSYIPTFGRGTSLIVHPYIQNPDPAVYQ --------------------------1--------------------------------- LRDSKDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFAC ---------2-------------------------------------------------2 ANAFNNSIIPEDTFFPS ----------------- >ELS4 TCR ALPHA CHAIN; SWP:NA; PDB:2NW2B; DAGITQSPRHKVTETGTPVTLRCHQTENHRYMYWYRQDPGHGLRLIHYSYGVKDTDKGEV ----------------------1------------------------------------- SDGYSVSRSKTEDFLLTLESATSSQTSVYFCATGTGDSNQPQHFGDGTRLSILEDLNKVF ------------------------------1----------------------------- PPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQP -----------------------2------------------------------------ ALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWG ----------------------------2------------------------------- RAD --- >Lysozyme C [Precursor]; SWP:P61626; PDB:2NWDX; KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQIN -----1-----------------------2------------------------------ SRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRD ----3-----------4---3-------------4--------------------2---- VRQYVQGCGV -------1-- >PUTATIVE DIMETAL PHOSPHAT; SWP:Q7T291; PDB:2NXFA; DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDII ------------------------------------------------------------ DGHNRRRDASDRALDTVAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQGSDLIGD ------------------------------------------------------------ DIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVG ------------------------------------------------------------ LEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICLAWNHEAVL --------------------------------------------1--------------- SVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIETPPHSHAFATAYLYEDRVKGR ----------------------1------------------------------------- GRVEDLTITYS ----------- >ENVELOPE GLYCOPROTEIN GP1; SWP:P01730; PDB:2NY1A; EVVLVNVTENFNMWKNDMVEQMHEDICSLWDQSLKPCVKLTPLCVGAGSCNTSVITQACP --------------------------1---------2------3-----3--------2- KVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSSQLLLNGSLA -----------4---------5----------5-------4------------------- EEEVVIRSVNFTDNAKTIIVQLNTSVEINCTGAGHCNIARAKWNNTLKQIASKLREQFGN -----------------------------6-----6------------------------ NKTIIFKQSSGGDPEIVTHWFNCGGEFFYCNSTQLFNSTWFNGSDTITLPCRIKQIINMW ----------------------7------8--------------------8--------- CKVGKAMYAPPISGQIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELYKYK 1----------------7------------------------------------------ VVKIE ----- >T-cell surface glycoprote; SWP:P01730; PDB:2NY1B; KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRS ---------------1-------------------------------------------- LWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLES -----------------------1------------------------------------ PPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ ---------2----------------------------2--------------------- K - >ENVELOPE GLYCOPROTEIN GP1; SWP:NA; PDB:2NY1C; DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPA ----------------------1------------------------------------- RFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIF ---------------------------1-------------------------------- PPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSST ---------------2-------------------------------------------- LTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG ---------------2------------------ >ENVELOPE GLYCOPROTEIN GP1; SWP:NA; PDB:2NY1D; EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHY ---------------------1-------------------------------------- APHLQGRVTITADKSTSTVYLELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQ -----------------------------------1------------------------ GTLVTVSSASTKGPSVFPLAPGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQ ----------------------------2------------------------------- SSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK ------------------------2------------------ >BOTULINUM NEUROTOXIN TYPE; SWP:NA; PDB:2NYYD; VQLQESGGGLVQPGGSLRLSCAASGFTFKYDYMYWVRQAPGKGLEWVATISDGGSYTYYS --------------------1--------------------------------------- DSVEGRFTTSRDNSKNTLYLQMNSLRAEDTAIYYCSRYRYDDAMDYWGQGTLVTVSSAST ----------------------------------1------------------------- KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLY -----------------------2------------------------------------ SLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP -------------------2----------------- >CHOLERA ENTEROTOXIN SUBUN; SWP:NA; PDB:2NZGD; APQNITELCSEYHNTQIYTINDKILSYTESLRGKREMAIITFKNGATFQVEVPGQKKAIE --------1--------------------------------------------------- RMKDTLRIAYLTEAKVEKLCVWNNKTPNSIAAISMA -------------------1---------------- >RIBONUCLEOTIDE REDUCTASE ; SWP:P50650; PDB:2O1ZA; KKFSDLQKSKEANEKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDF ------------------------------------------------------------ EKLNDNEKHFIKHVLAFFAASLASKFLRQVKITEAKKFYAFQIAVENIHSETYSLLIDNY ------------------------------------------------------------ IKDEKERMNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIF ------------------------------------------------------------ WFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSFI ------------------------------------------------------------ CESLPCDLIGMNSRLMSQYIEFVADRLLECLGSPKIFHAKNPFNWMDL 1----1------------------------------------------ >KIT LIGAND; SWP:NA; PDB:2O26U; PPSIHPAQSELIVEAGDTLSLTCIDPDFVRWTFKTYFNEMVENKKNEWIQEKAEATRTGT ----------------------1------------------------------------- YTCSNSNGLTSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTDPQVSQYSLIECDGK --1--------------------------------------2--------------3--- SLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVV ----------------------------3--2---------------------------- SVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQ ------------------4----------------------------------------- ETLTISSARVDDSGVFMCYANNTFGSANVTTTLKV -----------------4----------------- >KIT LIGAND; SWP:Q64384; PDB:2O27A; CGNNVKDITKLVANLPNDYMITLNYVAGMDVLPSHCWLRDMVIQLSLSLTTLLDKFSNIS 1----------------------------------2------------------------ EGLSNYSIIDKLGKIVDDLVLCMEENAPKNISPKRPETRSFTPEEFFSIFNRSIDAFKDF ---------------------1-------------------------------------- SDCVLS --2--- >Membrane cofactor protein; SWP:P15529; PDB:2O39C; CEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDRNHTWLPVSDDAC 1----------------------------2---------------1-------------2 YRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKP ----3---------------------------4-------------3------------- PICEKV --4--- >ADP-RIBOSYL CYCLASE 1; SWP:P28907; PDB:2O3SA; FWRQTWSGPGTTKRFPETVLARCVKYTEIHPEMRHVDCQSVWDAFKGAFISKHPCDITEE ----------------------1--------------1----------------2----- DYQPLMKLGTQTVPCNKILLWSRIKDLAHQFTQVQRDMFTLEDTLLGYLADDLTWCGEFD --------------3----------------------------------------4---- TSKINYQSCPDWRKDCSNNPVSVFWKTVSRRFAEAACDVVHVMLDGSRSKIFDKDSTFGS --------4------2--------------------3----------------------- VGVHNLQPEKVQTLEAWVIHGGREDSRDLCQDPTIKELESIISKRNIQFSCKNIYRPDKF -----------------------------5--------------------5--------- LQCVKNPEDSSC --6--------6 >M11L PROTEIN; SWP:Q85295; PDB:2O42A; SRLKTAVYDYLNDVDITECTEDLLCQLSNCCDFINETYAKNYDTLYDIERDILSYNIVNI -----------------------------1------------------------------ KNTLTFALRDASPSVKLATLTLLASVIKKLNKIQHTDAAFSEVIDGIVAEEQQVIGFIQK ------------------------------------------------------------ KCKYNTTYYNVRS -1----------- >ERYTHRONATE-4-PHOSPHATE D; SWP:Q9I3W9; PDB:2O4CA; MRILADENIPVVDAFFADQGSIRRLPGRAIDRAALAEVDVLLVRSVTEVSRAALAGSPVR ------------------------------------------------------------ FVGTCTIGTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYG ----1------------------------1------------------------------ VVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRD ------------------------------------------------------------ GEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQA ------------------------------------------------------------ DPELAARCLIATPHIAGYSLEGKLRGTAQIYQAYCAWRGIAERVSLQDVLPETWLAGLQL ------------------------------------------------------------ NPGCDPAWALATLCRAVYDPRSDDAAFRRSLTGDSATRRAAFDALRKHYPPRREITGLRV ------------------------------------------------------------ ATGGQAELQRVVRALGAQLV -------------------- >VARIABLE LYMPHOCYTE RECEP; SWP:Q32R26; PDB:2O6QA; NEALCKKDGGVCSCNNNKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRL ----1------2-1--------2------------------------------------- TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQ ------------------------------------------------------------ LKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKL ------------------------------------------------------------ TELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNGIIYMAKWLKKKADEGLG --------------------------------------3--------------------- GVDTAGCEKGGKAVLEITEKDAASDCVSPN ------3----------------------- >VARIABLE LYMPHOCYTE RECEP; SWP:Q4G1L2; PDB:2O6RA; CPSRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLS 1---2-1------2---------------------------------------------- QNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIF ------------------------------------------------------------ DRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKCSGSGKPVRSIICPT -----------------3-4----------------------3-----------4-- >VARIABLE LYMPHOCYTE RECEP; SWP:Q4G1L3; PDB:2O6SA; CPSRCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLG 1---2-1------2---------------------------------------------- GNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVF ------------------------------------------------------------ DKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINKHSGV -----------------------------------------3-4---------------- VRNSAGSVAPDSAKCSGSGKPVRSIICP --------------3-----------4- >CHOLESTERYL ESTER TRANSFE; SWP:P11597; PDB:2OBDA; TSHEAGIVCRITKPALLVLNHETAKVIQTAFQRASYPDITGEKAMMLLGQVKYGLHNIQI ------------------------------------------------------------ SHLSIASSQVELVEAKSIDVSIQDVSVVFKGTLKYGYTTAWWLGIDQSIDFEIDSAIDLQ ------------------------------------------------------------ INTQLTADSGRVRTDAPDCYLSFHKLLLHLQGEREPGWIKQLFTNFISFTLKLVLKGQIC ------------------1----------------------------------------1 KEINVISNIMADFVQTRAASILSDGDIGVDISLTGDPVITASYLESHHKGHFIYKDVSED ------------------------------------------------------------ LPLPTFSPTLLGDSRMLYFWFSERVFHSLAKVAFQDGRLMLSLMGDEFKAVLETWGFNTN ------------------------------------------------------------ QEIFQEVVGGFPSQAQVTVHCLKMPKISCQNKGVVVDSSVMVKFLFPRPDQQHSVAYTFE ------------------------------------------------------------ EDIVTTVQASYSKKKLFLSLLDFQITPKTVSNLTESSSESIQSFLQSMITAVGIPEVMSR ------------------------------------------------------------ LEVVFTALMNSKGVSLFDIINPEIITRDGFLLLQMDFGFPEHLLVDFLQSLS ---------------------------------------------------- >SELT/SELW/SELH SELENOPROT; SWP:Q4KGC5; PDB:2OBKA; RKPEVIITYCTQCQWLLRAAWLAQELLSTFSDDLGKVSLEPATGGAFRITCDGVQIWERK ---------1--1----------------------------------------------- ADGGFPEAKVLKQRVRDQIDPERD ------------------------ >COMPLEMENT C2; SWP:Q95IG1; PDB:2ODPA; KIQIQRSGHLNLYLLLDASQSVSENDFLIFKESASLMVDRIFSFEINVSVAIITFASEPK ------------------------------------------------------------ VLMSVLNDNSRDMTEVISSLENANYKDHENGTGTNTYAALNSVYLMMNNQMRLLGMETMA ------------------------------------------------------------ WQEIRHAIILLTDGKSNMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVGKLDVDWREL ------------------------------------------------------------ NELGSKKDGERHAFILQDTKALHQVFEHMLDVSKLTDTICGVGNMSANASDQERTPWHVT ---------------------------------------1-------------------- IKPTCRGALISDQWVLTAAHCFWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQGIL ----2---------------2--------------------------------------- EFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPA -------------------------1--3---------------3--------------- HFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQEDESPC ----------------------4--------------------------4---------5 KGESGGAVFLERRFRFFQVGLVSWGLYNPCLNSRKRAPRSKVPPPRDFHINLFRMQPWLR -----------------------------5------------------------------ QHLGDVLNFL ---------- >Inositol-tetrakisphosphat; SWP:Q13572; PDB:2ODTX; KGKRVGYWLSEKKIKKLNFQAFAELCRKRGEVVQLNLSRPIEEQGPLDVIIHKLTDVILE ------------------------------------------------------------ ADQNDSQSLELVHRFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYEDDRICS ------------------------------------------------------------ PPFELTSLCGDDTRLLEKNGLTFPFICKTRVAHGTNSHEAIVFNQEGLNAIQPPCVVQNF --------------------------1---------------------------1----- INHNAVLYKVFVVGESYTVVQRPSLKNFSAGTSDRESIFFNSHNVSKPESVLTELDKIEG ------------------------------------------------------------ VFERPSDEVIRELSRALRQALGVSLFGIDIIINNQTGQHAVIDINAFPGYEGVSEFFTDL ------------------------------------------------------------ LNHIATVLQG ---------- >High-affinity zinc uptake; SWP:ZNUA_ECOLI; PDB:2OGWA; AVVASLKPVGFIASAIADGVTETEVLLPDGASEHDYSLRPSDVKRLQNADLVVWVGPEEA ------------------------------------------------------------ FQKPVSKLPGAKQVTIAQLEDVKPLLKDFNHLWLSPEIARATAVAIHGKLVELPQSRAKL ------------------------------------------------------------ DANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQP ------------------------------------------------------------ GAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRGTLDPLGTNIKLGKTSYSE ------------------1----------------------------------------- FLSQLANQYASCLK -----------1-- >HYPOTHETICAL PROTEIN; SWP:Q7VWT7; PDB:2OJLA; HPPRIAIQYCTQCQWLLRAAWAQELLSTFGADLGEVALVPGTGGVFRIHYNGAPLWDREV ---------1--1----------------------------------------------- DGGFPEAKVLKQRVRDHL ------------------ >LACTOPEROXIDASE; SWP:A3F9D6; PDB:2OJVA; SWEVGCGAPVPLVTCDEQSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLAVPFG -----1--------2------------2-------------------------------- WTQRKTRNGFRVPLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPETELG ------------------------------------------------------------ SSEHSKVQCEEYCVQGDECFPIMFPKNDPKLKTQGKCMPFFRAGFVCPTPPYQSLARDQI --------3---4-----3-----------------4---------1------------- NAVTSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHGLAYPPFNNVKPSPCEFI --------------------------------------------------------5--- NTTAHVPCFQAGDSRASEQILLATVHTLLLREHNRLARELKRLNPHWDGEMLYQEARKIL -------5---------------------------------------------------- GAFIQIITFRDYLPIVLGSEMQKWIPPYQGYNNSVDPRISNVFTFAFRFGHMEVPSTVSR ------------------------------------------------------------ LDENYQPWGPEAELPLHTLFFNTWRIIKDGGIDPLVRGLLAKNSKLMNQNKMVTSELRNK ------------------------------------------------------------ LFQPTHKVHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQAVLKNKVLAKKL -----------------------------------6------------------------ LDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENPGVFTEKQ --------------------------------6--------------------------- RDSLQKVSFSRLICDNTHITKVPLHAFQANNYPHDFVDCSAVDKLDLSPWASREN -------------7------------------------7---------------- >HYPOTHETICAL PROTEIN; SWP:Q9HYQ7; PDB:2OKAA; AKPEIVITYCTQCQWLLRAAWLAQELLSTFADDLGKVCLEPGTGGVFRITCDGVQVWERK ---------1--1----------------------------------------------- ADGGFPEAKALKQRVRDRIDPQRD ------------------------ >PRO-PHENOLOXIDASE ACTIVAT; SWP:O97366; PDB:2OLGA; RNRRPELLPNDCGYQVEADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRY -----------1--------------------------------------2--------- IVTAAHCVAGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPD ------2---------------------------3------3------------------ YVDGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYST ------------------------------1----------------------------- IKQKLAVPVVHAEQCAKTFGAAGVRVRSSQLCAGGEKAKDSCGGDSGGPLLAERANQQFF --------------4----------------4---------5------------------ LEGLVSFGATCGTEGWPGIYTKVGKYRDWIEGNIRP ----------5------------------------- >PHYHD1 PROTEIN; SWP:Q7Z623; PDB:2OPWA; ACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQL -1---------------------------------------------------------- RAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSF ------------------------------------------------------------ KVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDAT ------------------------------------------------------------ LENGCLWFIPGSHTSGVSRRMVRAPPGTSFLGSEPARDNSLFVPTPVQRGALVLIHGEVV ------------------------------------------------------------ HKSKQNLSDRSRQAYTFHLMEASGTTWSPENWLQPTAELPFPQLYT ---------------------------------------------- >PHOSPHOLIPASE A2 1; SWP:P00598; PDB:2OSHA; NLYQFKNMIQCTVPSRSWCDFADYGCYCGKGGSGTPVDDLDRCCQVHDNCYNEAEKISGC ----------1--------------2-3--------------43-----5---------6 WPYFKTYSYECSQGTLTCKGGNNACAAAVCDCDRLAAICFAGAPYTDANYNIDLKARCQ ----------1------7------6----7-5------4------------------2- >TRYPSIN INHIBITOR; SWP:NA; PDB:2OT6A; PCCDSCVCTKSIPPQCHCTNIRLNSCHSGCKSCLCTASGSCRCLDIANFCYKPCK -12--3-4-------4-2-------5---6--5-7-----7-6------3---1- >ALKYLHYDROPEROXIDASE AHPD; SWP:Q2RXN9; PDB:2OUWA; GATVRLLDDAEISTLPEVKAVFDDIRATRGSDFVNNIWRGLANDPALLKRTWEQVKTVVG ------------------------------------------------------------ EGALDPLTREIYLAVSTANSCSYCAHSHTAAARAKGTPAQHAEVLAIIGLAAQTNALVTA --------------------1--1------------------------------------ QIPVDEAFLV ---------- >STAL; SWP:Q8KLM3; PDB:2OV8A; MMCWIASYPKAGGHWLRCMLTSYVTGEPVETWPGIQAGVPHLEGLLRDGEAPSADPDEQV -----------------1------------------------------------------ LLATHFTADRPVLRFYRESTAKVVCLIRNPRDAMLSLMRMKVEACRKIAETFIADEGFSS ------------------------------------------------------------ VRIWAGEGSWPENIRSWTDSVHESFPNAAVLAVRYEDLRKDPEGELWKVVDFLELGGRDG ------------------------------------------------------------ VADAVANCTLERMREMEERSKLLGLETTSLKFMGDDIEKAYADLLHGETDFAHYARLYGY -------1---------------------------------------------------- A - >SELENOPROTEIN W-RELATED P; SWP:Q9KTC1; PDB:2P0GA; KAQIEIYYCRQCNWLRSAWLSQELLHTFSEEIEYVALHPDTGGRFEIFCNGVQIWERKQE --------1--1------------------------------------------------ GGFPEAKVLKQRVRDLI ----------------- >ALPHA-1-PUROTHIONIN; SWP:P01544; PDB:2PLH; KSCCRSTLGRNCYNLCRARGAQKLCAGVCRCKISSGLSCPKGFPK --12-------3---4--------4---3-2-------1------ >PORCINE PANCREATIC SPASMO; SWP:P01359; PDB:2PSPA; KPAACRCSRQDPKNRVNCGFPGITSDQCFTSGCCFDSQVPGVPWCFKPLPAQESEECVMQ ----1-2----------3---------4----32----------4-----------5--- VSARKNCGYPGISPEDCAARNCCFSDTIPEVPWCFFPMSVEDCHY ------6---------7----65----------7--------1-- >BENCE-JONES PROTEIN RHE (; SWP:NA; PDB:2RHE; ESVLTQPPSASGTPGQRVTISCTGSATDIGSNSVIWYQQVPGKAPKLLIYYNDLLPSGVS ---------------------1-------------------------------------- DRFSASKSGTSASLAISGLESEDEADYYCAAWNDSLDEPGFGGGTKLTVLGQPK ----------------------------1------------------------- >SARCOPLASMIC CALCIUM-BIND; SWP:P04570; PDB:2SAS; GLNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLED ------------------------------------------------------------ EWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDG ------------------------------------------------------------ IVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYYRLLTSPAADAGNTL ----------1------1------------------------------------------ MGQKP ----- >SERINE PROTEINASE; SWP:P41140; PDB:2SFA; IAGGEAIYAAGGGRCSLGFNVRSSSGATYALTAGHCTEIASTWYTNSGQTSLLGTRAGTS --------------1--------------------1------------------------ FPGNDYGLIRHSNASAADGRVYLYNGSYRDITGAGNAYVGQTVQRSGSTTGLHSGRVTGL ------------------------------------------------------------ NATVNYGGGDIVSGLIQTNVCAEPGDSGGALFAGSTALGLTSGGSGNCRTGGTTFFQPVT --------------------2--------------------------2------------ EALSAYGVSIL ----------- >Subtilisin inhibitor [Pre; SWP:P01006; PDB:2SICI; YAPSALVLTVGKGVSATTAAPERAVTLTCAPGPSGTHPAAGSACADLAAVGGDLNALTRG ----------------------------1--------------1---------------- EDVMCPMVYDPVLLTVDGVWQGKRVSYERVFSNECEMNAHGSSVFAF ----2-----------------------------2------------ >SCORPION NEUROTOXIN (VARI; SWP:P01494; PDB:2SN3; KEGYLVKKSDGCKYGCLKLGENEGCDTECKAKNQGGSYGYCYAFACWCEGLPESTPTYPL -----------1---2--------3---4-----------2----3-4------------ PNKSC ----1 >TRANSFORMING GROWTH FACTO; SWP:P61812; PDB:2TGI; ALDAAYCFRNVQDNCCLRPLYIDFKRDLGWKWIHEPKGYNANFCAGACPYLWSSDTQHSR ------1-------21---------------------------3---4------------ VLSLYNTINPEASASPCCVSQDLEPLTILYYIGKTPKIEQLSNMIVKSCKCS -----------------2------------------------------3-4- >TUMOR NECROSIS FACTOR ALP; SWP:P06804; PDB:2TNFA; SDKPVAHVVANHQVEEQLEWLSQRANALLANGMDLKDNQLVVPADGLYLVYSQVLFKGQG ------------------------------------------------------------ CPDYVLLTHTVSRFAISYQEKVNLLSAVKSPCPKDTPEGAELKPWYEPIYLGGVFQLEKG 1------------------------------1---------------------------- DQLSAEVNLPKYLDFAESGQVYFGVIAL ---------------------------- >THIOREDOXIN; SWP:P0AA25; PDB:2TRXA; SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI -------------------------------1--1------------------------- DQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA ------------------------------------------------ >HEMAGGLUTININ; SWP:P03437; PDB:2VIUA; STATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLID -------------------------------------------1-----------2---- ALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWT -------2--------------------3------------------------------- GVIQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGIHHPSTN ----------3------------------------------------------------- QEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSN ------------------------------------------------------------ GNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKY ----------------------------1---4-----------------------4--- VKQNTLKLATGMRNVPEKQT -------------------- >VARIANT SURFACE GLYCOPROT; SWP:P26329; PDB:2VSGA; THFGVKYELWQPECELTAELRKTAGVAKMKVNSDLNSFKTLELTKMKLLTFAAKFPESKE -------------1---------------------------------------------- ALTLRALEAALNTDLRALRDNIANGIDRAVRATAYASEAAGALFSGIQTLHDATDGTTYC -----------------------------------------------------------2 LSASGQGSNGNAAMASQGCKPLALPELLTEDSYNTDVISDKGFPKISPLTNAQGQGKSGE ------------------1----------------------------------------- CGLFQAASGAQATNTGVQFSGGSRINLGLGAIVASAAQQPTRPDLSDFSGTARNQADTLY 2----------------------------------------------------------- GKAHASITELLQLAQGPKPGQTEVETMKLLAQKTAALDSIKFQLAASTGKKTSDYKEDEN ------------------------------------------------------------ LKTEYFGKTESNIEALWNKVKEEKVKGADPEDPSKESKISDLNTEEQLQRVLDYYAVA ---------------------------------------------------------- >IGG1 ANTIBODY 32C2; SWP:NA; PDB:32C2B; DVQLQESGPGLVKPSQSLSLTCTVTGYSISSDYAWNWIRQFPGNKLEWMGYISYSGSTSY ---------------------1-------------------------------------- NPSLKSRISITRDTSKNQFFLQLSSVTTEDTATYYCARGYYGSSHSPVWGAGTTVTVSSA -----------------------------------1------------------------ KTTPPPVYPLVPGSLAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDL -------------------------2---------------------------------- YTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIEP --------------------2----------------- >Cholera enterotoxin subun; SWP:P01556; PDB:3CHBD; TPQNITDLCAEYHNTQIHTLNDKIFSYTESLAGKREMAIITFKNGATFQVEVPGSQHIDS --------1--------------------------------------------------- QKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPRAIAAISMAN -------------------------1----------------- >CHYMOSIN B; SWP:P00794; PDB:3CMS; VASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRK --------------------------------------------1----1---------- SSTFQNLGKPLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGI ------------------------------------------------------------ LGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHW ------------------------------------------------------------ VPVTVQQYWQFTVDSVTISGVVVACEGGCQAILDTGTSKLVGPSSDILNIQQAIGATQNQ ------------------------2---2------------------------------- YGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQDQGFCTSGFQSEQKWILGDVFIRE -------3--------------------------------3------------------- YYSVFDRANNLVGLAKAI ------------------ >NEONATAL FC RECEPTOR; SWP:P13599; PDB:3FRUA; AEPRLPLMYHLAAVSDLSTGLPSFWATGWLGAQQYLTYNNLRQEADPCGAWIWENQVSWY ------------------------------------------------------------ WEKETTDLKSKEQLFLEAIRTLENQINGTFTLQGLLGCELAPDNSSLPTAVFALNGEEFM ------------------------------------------------------------ RFNPRTGNWSGEWPETDIVGNLWMKQPEAARKESEFLLTSCPERLLGHLERGRQNLEWKE ------------------------------------------------------------ PPSMRLKARPGNSGSSVLTCAAFSFYPPELKFRFLRNGLASGSGNCSTGPNGDGSFHAWS -------------------1---------------------------------------- LLEVKRGDEHHYQCQVEHEGLAQPLTVDL -------------1--------------- >GLUTATHIONE REDUCTASE; SWP:P00390; PDB:3GRS; VASYDYLVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSE ----------------------------------------1----1-------------- FMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPK ------------------------------------------------------------ PTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELPGRSVIVGAGY ------------------------------------------------------------ IAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKT ------------------------------------------------------------ LSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDE ------------------------------------------------------------ FQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPI ------------------------------------------------------------ GTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQG ------------------------------------------------------------ LGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTLR ----------------------------------------- >INTERLEUKIN-8; SWP:P10145; PDB:3IL8; LRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPKENWVQRVVEK --1-2------------------------1---------------2-------------- FLKRAENS -------- >APOLIPOPROTEIN; SWP:P08519; PDB:3KIV; QCYHGNGQSYRGTFSTTVTGRTCQSWSSMTPHRHQRTPENYPNDGLTMNYCRNPDADTGP -1--------------------2---------------------------3--------- WCFTTDPSIRWEYCNLTRC -2-----------3----1 >DIHYDROLIPOAMIDE DEHYDROG; SWP:P18925; PDB:3LADA; SQKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALL -----------------------------------------------1----1------- DSSYKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGH ------------------------------------------------------------ GKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVDQDVIVDSTGALDFQNVP ------------------------------------------------------------ GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILL ------------------------------------------------------------ GARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFI ------------------------------------------------------------ YVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHKAQMNYDLIPAVIYTHP ------------------------------------------------------------ EIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIG ------------------------------------------------------------ PSAAELVQQGAIAMEFGTSAEDLGMMVFAHPALSEALHEAALAVSGHAIHVA ---------------------------------------------------- >LYSOZYME; SWP:P00698; PDB:3LZT; KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINS -----1-----------------------2------------------------------ RWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDV ---3-----------4---3-------------4--------------------2----- QAWIRGCRL ------1-- >ENDOGLUCANASE I; SWP:P46237; PDB:3OVWA; TPDKAKEQHPKLETYRCTKASGCKKQTNYIVADAGIHGIRQKNGAGCGDWGQKPNATACP ----------------1-----1-----------------------2-----------3- DEASCAKNCILSGMDSNAYKNAGITTSGNKLRLQQLINNQLVSPRVYLLEENKKKYEMLH ----3---2--------------------------------------------------- LTGTEFSFDVEMEKLPCGMNGALYLSEMPQDGGKSTSRNSKAGAYYGAGYCDAQCYVTPF ----------------4---------------------------------5---6----- INGVGNIKGQGVCCNELDIWEANSRATHIAPHPCSKPGLYGCTGDECGSSGICDKAGCGW ------------65-------------------7-------8----8-----7----9-- NHNRINVTDFYGRGKQYKVDSTRKFTVTSQFVANKQGDLIELHRHYIQDNKVIESAVVNI ------------------------------------------------------------ SGPPKINFINDKYCAATGANEYMRLGGTKQMGDAMSRGMVLAMSVWWSEGDFMAWLDQGV -------------9---------------------------------------------- AGPCDATEGDPKNIVKVQPNPEVTFSNIRIGEIGSTSSV ---4----------------------------------- >Ribulose bisphosphate car; SWP:P00876; PDB:3RUBL; LTYYTPEYQTKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTVWTDGLTSLDRYKGRCYR ------------------------------------------------------------ IERVVGEKDQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVK ------------------------------------------------------------ TFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENV -------------------------1-------------------1-------------- NSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVM ------------------------------------------------------------ HDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHI ------------------------------------------------------------ HSGTVVGKLEGERDITLGFVDLLRDDFVEQDRSRGIYFTQDWVSLPGVLPVASGGIHVWH ------------------------------------------------------------ MPALTEIFGDDSVLQFGGMTLGHPWGNAPGAVANRVALEACVKARNEGRDLAQEGNEIIR ------------------------------------------------------------ EACKWSPELAAACEVWKEIVF --------------------- >STAPHYLOCOCCAL ENTEROTOXI; SWP:P01552; PDB:3SEB; ESQPDPKPDELHKSSKFTGLMENMKVLYDDNHVSAINVKSIDQFLYFDLIYSIKDTKLGN ------------------------------------------------------------ YDNVRVEFKNKDLADKYKDKYVDVFGANYYYQCYFSKKTNDINSHQTDKRKTCMYGGVTE --------------------------------1-------------------1------- HNGNQLDKYRSITVRVFEDGKNLLSFDVQTNKKKVTAQELDYLTRHYLVKNKKLYEFNNS ------------------------------------------------------------ PYETGYIKFIENENSFWYDMMPAPGDKFDQSKYLMMYNDNKMVDSKDVKIEVYLTTKK ---------------------------------------------------------- >SIALIDASE; SWP:P29768; PDB:3SIL; KSVVFKAEGEHFTDQKGNTIVGSGSGGTTKYFRIPAMCTTSKGTIVVFADARHNTASDQS -------------------------------------1---------------------- FIDTAAARSTDGGKTWNKKIAIYNDRVNSKLSRVMDPTCIVANIQGRETILVMVGKWNNN --------------------------------------1--------------------- DKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKVETNIHDIVTKNGTISAMLGGVGSGLQL ------------------------------------------------------------ NDGKLVFPVQMVRTKNITTVLNTSFIYSTDGITWSLPSGYCEGFGSENNIIEFNASLVNN ------------------------------------------------------------ IRNSGLRRSFETKDFGKTWTEFPPMDKKVDNRNHGVQGSTITIPSGNKLVAAHSSAQNKN ------------------------------------------------------------ NDYTRSDISLYAHNLYSGEVKLIDDFYPKVGNASGAGYSCLSYRKNVDKETLYVVYEANG ------------------------------------------------------------ SIEFQDLSRHLPVIKSYN ------------------ >TRIACYL-GLYCEROL ACYLHYDR; SWP:P19515; PDB:3TGL; GIRAATSQEINELTYYTTLSANSYCRTVIPGATWDCIHCDATEDLKIIKTWSTLIYDTNA ------------------------1----------2--2--------------------- MVARGDSEKTIYIVFRGSSSIRNWIADLTFVPVSYPPVSGTKVHKGFLDSYGEVQNELVA ------------------------------------------------------------ TVLDQFKQYPSYKVAVTGHSLGGATVLLCALDLYQREEGLSSSNLFLYTQGQPRVGDPAF ------------------------------------------------------------ ANYVVSTGIPYRRTVNERDIVPHLPPAAFGFLHAGEEYWITDNSPETVQVCTSDLETSDC --------------------------------------------------3--------3 SNSIVPFTSVLDHLSYFGINTGLCT -----------------------1- >Hirudin variant-2 [Precur; SWP:P09945; PDB:4HTCI; ITYTDCTESGQNLCLCEGSNVCGKGNKCILGGNQCVTGEGTPKPESHNNGDFEEIPEEYL -----1-------1-2-----3-----2------3------------------------- Q - >SOUTHERN BEAN MOSAIC VIRU; SWP:P03607; PDB:4SBVA; SSMDVTILSHCELSTELAVTVTIVVTSELVMPFTVGTWLRGVAQNWSKYAWVAIRYTYLP ------------------------------------------------------------ SCPTTTSGAIHMGFQYDMADTLPVSVNQLSNLKGYVTGPVWEGQSGLCFVNNTKCPDTSR -----------------------------------------------1------1----- AITIALDTNEVSEKRYPFKTATDYATAVGVNANIGNILVPARLVTAMEGGSSKTAVNTGR ------------------------------------------------------------ LYASYTIRLIEPIAAALNL ------------------- >Proteinase inhibitor type; SWP:P01080; PDB:4SGBI; PICTNCCAGYKGCNYYSANGAFICEGQSDPKKPKACPLNCDPHIAYSKCPR --1--23-----4----------2-----------3---1--------4-- >TUMOR NECROSIS FACTOR-ALP; SWP:P01375; PDB:4TSVA; DKPVAHVVANPQAEGQLQWSNRRANALLANGVELRDNQLVVPIEGLFLIYSQVLFKGQGC -----------------------------------------------------------1 PSTHVLLTHTISRIAVSYQTKVNLLSAIKSPCQRETPEGAEAKPWYEPIYLGGVFQLEKG -------------------------------1---------------------------- DRLSAEINRPDYLDFAESGQVYFGIIAL ---------------------------- >UDP-N-ACETYLMURAMOYL-L-AL; SWP:P14900; PDB:4UAGA; ADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDE ------------------------------------------------------------ WLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTT ------------------------------------------------------------ LVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNVT ------------------------------------------------------------ EDHMDRYPFGLQQYRAALRIYENAKVCVVNADDALTMPIRCVSFGVNMGDYHLNHETWLR --------------------------1-------------1------------------- VKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEH ------------------------------------------------------------ NGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCF ------------------------------------------------------------ GRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEF ------------------------------------------------------------ ARLAKELG -------- >PLASMINOGEN; SWP:P00747; PDB:5HPGA; DCMFGNGKGYRGKRVTTVTGTPCQDWAAQEPHRHSIFTPETNPRAGLEKNYCRNPDGDVG -1--------------------2----------------------------3-------- GPWCYTTNPRKLYDYCDVPQCAAP ---2-----------3----1--- >MALATE DEHYDROGENASE; SWP:P11708; PDB:5MDHA; SEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA ------------------------------------------------------------ LPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAK ------------------------------------------------------------ KSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNV ---------------1----------------1--------------------------- IIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKARKLS ------------------------------------------------------------ SAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVE ------------------------------------------------------------ GLPINDFSREKMDLTAKELAEEKETAFEFLSSA --------------------------------- >PHOSPHOLIPASE A2; SWP:P00592; PDB:5P2PA; ALFQFRSMIKCAIPGSHPLMDFNNYGCYCGWGGSGTPVDELDRCCETHDNCYRDAKNLSG ----------1---------------2-3--------------43-----5--------- CYPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC 6----------1------7------6----7-5------4------------------2 >Ig heavy chain V-II regio; SWP:P01825; PDB:7FABH; AVQLEQSGPGLVRPSQTLSLTCTVSGTSFDDYYWTWVRQPPGRGLEWIGYVFYTGTTLLD ---------------------1-------------------------------------- PSLRGRVTMLVNTSKNQFSLRLSSVTAADTAVYYCARNLIAGGIDVWGQGSLVTVSSAST ----------------------------------1------------------------- KGPSVFPLAPTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTV ---------------2-------------------------------------------- PSSSLGTQTYICNVNHKPSNTKVDKKVEP -----------2----------------- >Ig lambda chain V-I regio; SWP:P01703; PDB:7FABL; ASVLTQPPSVSGAPGQRVTISCTGSSSNIGAGHNVKWYQQLPGTAPKLLIFHNNARFSVS ---------------------1-------------------------------------- KSGTSATLAITGLQAEDEADYYCQSYDRSLRVFGGGTKLTVLRQPKAAPSVTLFPPSSEE ----------------------1------------------------------------- LQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQ ---------2-------------------------------------------------- WKSHKSYSCQVTHEGSTVEKTVAP --------2--------------- >MALATE DEHYDROGENASE; SWP:P17606; PDB:7MDHA; DCFGVFCTWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEG -1----1----------------------------------------------------- VAMELEDSLYPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQ ------------------------------------------------------------ GKALNAVASKNVKVLVVGNPCNTNALICLKNAPDIPAKNFHALTRLDENRAKCQLALKAG ------------------------------------------------------------ VFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTKWLEEEFTITVQKRGGALIQ ------------------------------------------------------------ KWGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDG ------------------------------------------------------------ DYELATDVSNDDFLWERIKKSEAELLAEKKCVAHLTGEGNAYCDVPEDTML ------------------------------2-----------2-------- >IGG1-LAMBDA HIL FAB (HEAV; SWP:Q8TBC9; PDB:8FABA; ELTQPPSVSVSPGQTARITCSANALPNQYAYWYQQKPGRAPVMVIYKDTQRPSGIPQRFS -------------------1---------------------------------------- SSTSGTTVTLTISGVQAEDEADYYCQAWDNSASIFGGGTKLTVLGQPKAAPSVTLFPPSS ------------------------1----------------------------------- EELQANKATLVCLISDFYPGAVTVAWKADSSPIKAGVETTTPSKQSNNKYAASSYLSLTP -----------2------------------------------------------------ EQWKSHRSYSCQVTHEGSTVEKTVAP ----------2--------------- >Ig heavy chain V-III regi; SWP:P01771; PDB:8FABB; AVKLVQAGGGVVQPGRSLRLSCIASGFTFSNYGMHWVRQAPGKGLEWVAVIWYNGSRTYY ---------------------1-------------------------------------- GDSVKGRFTISRDNSKRTLYMQMNSLRTEDTAVYYCARDPDILTAFSFDYWGQGVLVTVS -----------------------------------1------------------------ SASTKGPSVFPLAPTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSS -------------------2---------------------------------------- VVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS ---------------2------------------- >IGG1 ANTIBODY 32C2; SWP:NA; PDB:32C2A DIVLTQSPASLAVSLGQRATISCRASKSVSTSGYGYMHWNQQKPGQPPRLLIYLVSNLES ----------------------1------------------------------------- GVPARFSGSGSGTDFTLNIHPVEEEDAATYYCQHIREPLTFGGGTKLEIKRADAAPTVSI -------------------------------1---------------------------- FPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSS ----------------2------------------------------------------- TLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC ----------------2-------------------- >fluorescein-scfv light chain; SWP:NA; PDB:2A9ML VLTQPSSVSAAPGQKVTISCSGSTSNIGNNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDR -------------------1---------------------------------------- FSGSKSGNSASLDISGLQSEDEADYYCAAWDDSLSEFLFGTGTKLTV --------------------------1-------------------- >ADENYLATE KINASE ISOENZYME-2; SWP:P08166; PDB:1AK2A PKGVRAVLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSELGKKLKATMDAGK -----------------------------1------------------------------ LVSDEMVLELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPD -------------------1---------------------------------------- SLLIRRITGRLIHPQSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNKKALKIRLEAYHT ------------------------------------------------------------ QTTPLVEYYSKRGIHSAIDASQTPDVVFASILAAFSKATS ---------------------------------------- >NA; SWP:NA; PDB:2AK4E GVTQTPKFQVLKTGQSMTLQCAQDMNHNSMYWYRQDPGMGLRLIYYSASEGTTDKGEVPN --------------------1--------------------------------------- GYNVSRLNKREFSLRLESAAPSQTSVYFCASPGLAGEYEQYFGPGTRLTVTEDLKNVFPP ----------------------------1------------------------------- EVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPAL ---------------------2-------------------------------------- NDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRA --------------------------2--------------------------------- D - >YTS 105.18 antigen binding region Light chain; SWP:NA; PDB:2ARJA DIVMTQSPSSLAVSAGERVTLNCKASQNVRNNIAWYQQKPGQSPKLLIYYASYRYTGVPD ----------------------1------------------------------------- RFTGDGFGTDFTLAINSVQADDAAFYYCQRIYNSPYTFGAGTKLELIRADAAPTVSIFPP ---------------------------1-------------------------------- SMEQLTSGGASVVCFVNNFYPRDISVKWKIDGSEQRDGVLDSVTDQDSKDSTYSMSSTLS -------------2---------------------------------------------- LTKVEYERHNLYTCEVVHKTSSSPVVKSFNR -------------2----------------- >TP7 FAB; SWP:Q91W12_MOUSE; PDB:1AY1L DIQMTQSPAIMSASPGEKVTMTCSASSSVSYMYWYQQKPGSSPRLLIYDSTNLASGVPVR ----------------------1------------------------------------- FSGSGSGTSYSLTISRMEAEDAATYYCQQWSTYPLTFGAGTKLELKRADAAPTVSIFPPS --------------------------1--------------------------------- SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTL ------------2----------------------------------------------- TKDEYERHNSYTCEATHKTSTSPIVKSFNR ------------2----------------- >Phospholipase A2; SWP:P00593; PDB:2BAXA ALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYMQAMKLDS ----------1---------------2-3--------------43-----5--------- CKVLVDNPYTNNYSYSCSNNEITCSSENNACEAFICNCDRNAAICFSKVPYNKEHKNLDK 6---------------1------7------6----7-5------4--------------- KNC --2 >Antibody light chain 11K2; SWP:NA; PDB:2BDNL DIQMTQSSSSFSVSLGDRVTITCKATEDIYNRLAWYQQKPGSAPRLLISGATSLETGVPS ----------------------1------------------------------------- RFSGSGSGKDYTLSITSLQTEDVATYYCQQFWSAPYTFGGGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >FAB FRAGMENT; SWP:NA; PDB:1BJ1J DIQMTQSPSSLSASVGDRVTITCSASQDISNYLNWYQQKPGKAPKVLIYFTSSLHSGVPS ------------------------------------------------------------ RFSGSGSGTDFTLTISSLQPEDFATYYCQQYSTVPWTFGQGTKVEIKRTVAAPSVFIFPP ------------------------------------------------------------ SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------1---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE -------------1------------------- >ACETYL XYLAN ESTERASE; SWP:O59893; PDB:1BS9A SCPAIHVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSS -1-------------------------------------------2-----2-------- VAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSS ------------------1---------------------3------------------- AVNMVKAAIFMGDPMFRAGLSYEVGTCAAGGFDQRPAGFSCPSAAKIKSYCDASDPYCCN --------------------------4-------------3---------5------54- GSNAATHQGYGSEYGSQALAFVKSKLG --------------------------- >MONOCLONAL ANTIBODY AGAINST THE MAIN IMMUNOGENIC REGION OF THE HUMAN MUSCLE ACETYLCHOLINE RECEPTOR; SWP:NA; PDB:1C5DA DIQMTQSPPSLSASLGDKVTITCQASQDINKYIAWYQQKPGKAPRQLIRYTSILVLGTPS ----------------------1------------------------------------- RFSGSGSGRDFSFSISNVASEDIASYYCLQYGNLYTFGAGTKLEIKRADAAPTVSIFPPS ---------------------------1-------------------------------- TEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSL ------------2----------------------------------------------- TKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC ------------2-------------------- >MONOCLONAL ANTIBODY AGAINST THE MAIN IMMUNOGENIC REGION OF THE HUMAN MUSCLE ACETYLCHOLINE RECEPTOR; SWP:NA; PDB:1C5DB EVKLLESGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYN ---------------------1-------------------------------------- SALKSRLSINRDTSKSQVFLKMNSLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQT ----------------------------------1------------------------- TAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVHTFPAVLQSGLYT -----------------------2------------------------------------ LTSSVTSSTWPSQTVTCNVAHPASSTKVDKKLERR ----------------2------------------ >ACETYL-XYLAN ESTERASE; SWP:Q54413; PDB:2CC0A AACNGYVGLTFDDGPSGSTQSLLNALRQNGLRATMFNQGQYAAQNPSLVRAQVDAGMWVA --1--------------------------------------------------------- NHSYTHPHMTQLGQAQMDSEISRTQQAIAGAGGGTPKLFRPPYGETNATLRSVEAKYGLT ------------------------------------------------------------ EVIWDVDSQDWNNASTDAIVQAVSRLGNGQVILMHDWPANTLAAIPRIAQTLAGKGLCSG ---------------------------------------------------------1-- MISPQTGRAVAP ------------ >PROTEIN (IG HEAVY CHAIN V REGIONS); SWP:Q9R1A5_MOUSE; PDB:1CICA DIVMTQSHKFMSTSVGDRVSITCKASQDVRIAVAWYQQKPGQSPKLLIYWASTRHTGVPD ----------------------1------------------------------------- RFTGSGSGTDFTLTISNVQSEDLADYFCQHCGSYPFTFGSGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLDSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >PAPAIN; SWP:P00784; PDB:2CIOA IPEYVDWRQKGAVTPVKNQGSCGSWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDRRSY ---------------------1--------------------------------2----- GCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGAL -1-------------------------------2-------------------------- LYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGPNYILIKNSWGTGW -------------------------------3---------------------------- GENGYIRIKRGTGNSYGVCGLYTSSFYPVKN ------------------3------------ >ENDOGLUCANASE E-5; SWP:Q01786; PDB:2CKSA GTPVERYGKVQVCGTQLCDEHGNPVQLRGMSTHGIQWFDHCLTDSSLDALAYDWKADIIR ------------1----1----------------------2------------------- LSMYIQEDGYETNPRGFTDRMHQLIDMATARGLYVIVDWHILTPGDPHYNLDRAKTFFAE ------------------------------------------------------------ IAQRHASKTNVLYEIANEPNGVSWASIKSYAEEVIPVIRQRDPDSVIIVGTRGWSSLGVS ------------------------------------------------------------ EGSGPAEIAANPVNASNIMYAFHFYAASHRDNYLNALREASELFPVFVTEFGTETYTGDG ------------------------------------------------------------ ANDFQMADRYIDLMAERKIGWTKWNYSDDFRSGAVFQPGTCASGGPWSGSSLKASGQWVR ----------------------------------------2------------------- SKLQS ----- >A5B7 MONOCLONAL ANTIBODY; SWP:NA; PDB:1CLOL QTVLSQSPAILSASPGEKVTMTCRASSSVTYIHWYQQKPGSSPKSWIYATSNLASGVPAR ----------------------1------------------------------------- FSGSGSGTSYSLTISRVEAEDAATYYCQHWSSKPPTFGGGTKLEIKRADAAPTVSIFPPS --------------------------1--------------------------------- SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTL ------------2----------------------------------------------- TKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC ------------2-------------------- >COMPLEMENT INHIBITOR; SWP:Q5YD59; PDB:2CM4A CTGSEPVDAFQAFSEGKEAYVLVRSTDPKARDCLKGEPAGEKQDNTLPVMMTFKQGTDWA 1-------------------------------2--------------------------- STDWTFTLDGAKVTATLGQLTQNREVVYDSQSHHCHVDKVEKEVPDYEMWMLDAGGLEVE ----------------------------------3------------------------- VECCRQKLEELASGRNQMYPHLKDC --13--------------------2 >CRAMBIN; SWP:P01542; PDB:1CNRA TTCCPSIVARSNFNVCRLPGTPEALCATYTGCIIIPGATCPGDYAN --12-----------3---------3-----2-------1------ >COBROTOXIN; SWP:NXS1_NAJAT; PDB:1CODA LECHNQQSSQTPTTTGCSGGETNCYKKRWRDHRGYRTERGCGCPSVKNGIEINCCTTDRC --1-------------2------1----------------2-3----------34----4 NN -- >GLRX2 protein; SWP:Q9NS18; PDB:2CQ9A GSSGSSGSLENLATAPVNQIQETISDNCVVIFSKTSCSYCTMAKKLFHDMNVNYKVVELD ---------------------------1-------------------------------- LLEYGNQFQDALYKMTGERTVPRIFVNGTFIGGATDTHRLHKEGKLLPLVHQCYLKKSKR ----------------------------------------------------1------- KEFQSGPSSG ---------- >7C8 FAB FRAGMENT; SHORT CHAIN; SWP:NA; PDB:1CT8A ELVMTQTPATLSVTPGDSVSLSCRASQSVSNKLHWYQQKSHESPRLLIKFASQSIPGIPS ----------------------1------------------------------------- RFSGSGSGSDFTLSINSVETEDFGIYFCHQTHGRPLTFGAGTKLELKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >CRAMBIN; SWP:P01542; PDB:1CXRA TTCCPSIVARSNFNVCRLPGTSEAICATYTGCIIIPGATCPGDYAN --12-----------3---------3-----2-------1------ >anti-glycophorin A type N immunoglobulin light chain; SWP:NA; PDB:2D03L ELVMTQSPLSLPVSLGDQASISCRSSQSLVHSSGNTYLHWYLQKPGQSPKLLIYKVSNRF ----------------------1------------------------------------- SGVPDRFSGSGSGTDFTLTISRVEAEDLGVYYCFQSSHVPLTFGAGTKLELKRADAAPTV --------------------------------1--------------------------- SIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSM ------------------2----------------------------------------- SSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN ------------------2------------------ >chitinase; SWP:NA; PDB:2DKVA EQCGAQAGGARCPNCLCCSRWGWCGTTSDFCGDGCQSQCSGCDGVGSIVPRDLFERLLLH --1--------2--3-41-----2------4---5---5--3------------------ RNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPD -----6------------------------------------------------------ GPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLL -------6-----------7-------7-------------------------------- SNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNI ------------------------------------------------------------ VNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPFN ------8-------------------------------8------- >Curculin; SWP:P19667; PDB:2DPFA DNVLLSGQTLHADHSLQAGAYTLTIQNKCNLVKYQNGRQIWASNTDRRGSGCRLTLLSDG ----------------------------1----------------------1-------- NLVIYDHNNNDVWGSACWGDNGKYALVLQKDGRFVIYGPVLWSLGPNGCRR --------------------------------------------------- >Lysozyme; SWP:Q8IU26; PDB:2DQAA FAPGMVSQKCLLCMCKLESGGCKPIGCRMDVGSLSCGYFQIKQPYWIDCGKPGKDWKSCS ---------1--2-3------3----4--------4------------5---------6- NDINCSSKCVQQYMKRYATHYRCPLNCEGFAREHNGGPNGCHSSRTLKYWELLQKIPGCK ----6---5-------------7---1-------------7-----------------2- GVK --- >Sweet protein mabinlin-2 chain B; SWP:P30233; PDB:2DS2B PALRQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI ------1-----------2-----------------------------------1----- GACPFRA --2---- >Hypothetical protein ygjK; SWP:P42592; PDB:2DS3A ADNYKNVINRTGAPQYKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTGGFPGVALLTEEY ------------------------------------------------------------ INFASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLTAKDVQVETLRFATPRTSLLETKI ------------------------------------------------------------ TSNKPLDLVWDGELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATW ------------------------------------------------------------ DLLTSGESEYQVHKSLPVQTEINGNRFTSKAHINGSTTLYTTYSHLLTAQEVSKEQQIRD ------------------------------------------------------------ ILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSPGGAVKFNTV ------------------------------------------------------------ TPSVTGRWFSGNQTWPWDTWKQAFAAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVP ------------------------------------------------------------ DLIAWNLSPERGGDGGNWNERNTKPSLAAWSVEVYNVTQDKTWVAEYPKLVAYHDWWLRN ------------------------------------------------------------ RDHNGNGVPEYGATRDKAHNTESGELFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPA ------------------------------------------------------------ QVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQES ------------------------------------------------------------ VDQASYYSDNHYLAEATILGKPEEAKRYRQLAQQLADYINTCFDPTTQFYYDVRIEDKPL -----------------------------------------1------------------ ANGCAGKPIVERGKGPEGWSPLFNGAATQANADAVVKVLDPKEFNTFVPLGTAALTNPAF ---1-------------------------------------------------------- GADIYWRGRVWVDQFWFGLKGERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGA ------------------------------------------------------------ QQGAPNFSWSAAHLYLYNDFFRK ----------------------- >CARBOXYPEPTIDASE A2; SWP:P48052; PDB:1DTDA FNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGGDKPAIWLDAG ------------------------------------------------------------ IHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMWR ------------------------------------------------------------ KTRSKVSAGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSANSEVEVKSIVDFIKSH -----------1----------------------1------------------------- GKVKAFIILHSYSQLLMFPYGYKCTKLDDFDELSEVAQKAAQSLSRLHGTKYKVGPICSV -----------------------2---------------------------------2-- IYQASGGSIDWSYDYGIKYSFAFELRDTGRYGFLLPARQILPTAEETWLGLKAIMEHVRD ------------------------------------------------------------ HPY --- >Catrocollastatin; SWP:Q90282; PDB:2DW0A PFRFVELVLVVDKAMVTKNNGDLDKIKTRMYEIVNTVNEIYRYMYIHVALVGLEIWSNED ------------------------------------------------------------ KITVKPEAGYTLNAFGEWRKTDLLTRKKHDNAQLLTAIDLDRVIGLAYVGSMCHPKRSTG ----------------------------------------------------1------- IIQDYSEINLVVAVIMAHEMGHNLGINHDSGYCSCGDYACIMRPEISPEPSTFFSNCSYF --------------------------------2-3----3----------------2--- ECWDFIMNHNPECILNEPLGTDIISPPVCGNELLEVGEECDCGTPENCQNECCDAATCKL ------------1---------------4----------5-6-----6---75----4-- KSGSQCGHGDCCEQCKFSKSGTECRASMSECDPAEHCTGQSSECPADVFHKNGQPCLDNY -----8----98--7--------a------b-----9------a-----------c---- GYCYNGNCPIMYHQCYDLFGADVYEAEDSCFERNQKGNYYGYCRKENGNKIPCAPEDVKC --b----c------d--------------e------------f---------f------g GRLYCKDNSPGQNNPCKMFYSNEDEHKGMVLPGTKCADGKVCSNGHCVDVATAY ----d----------e-------------------h-----g----h------- >Phospholipase C, gamma 2; SWP:Q8CIH5; PDB:2DX0A DTPPTELHFGEKWFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWR ------------------------------------------------------------ SGRVQHCRIRSTMENGVMKYYLTDNLTFNSIYALIQHYREAHLRCAEFELRLTDPVP ------1-------------------------------------1------------ >Ribonuclease; SWP:P07998; PDB:2E0JA KESRAKKFQRQHMDSDSSPSSSSTYCNQMMLLRNMTQGRCKPVNTFVHEPLVDVQNVCFQ -------------------------1-------------2-----------------3-- EKVTCKNGQGNCYKSNSSMHITDCRLTNGSRYPNCAYRTSPKERHIIVACEGSPYVPVHF ----4------4-----------1----------2--------------3---------- DASVEDST -------- >Ribonuclease; SWP:P07998; PDB:2E0OA KESRAKKFQRQHMDSDSSPSSSSTYCNQMMRRRNMTQGRCKPVNTFVHEPLLLVQLVCLQ -------------------------1-------------2-----------------3-- EKVTCKNGQGNCYKSNSSMHITDCRLTNGSRYPNCAYRTSPKERHIIVACEGSPYVPVHF ----4------4-----------1----------2--------------3---------- DASVED ------ >acyl transferase; SWP:NA; PDB:2E1VA ILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNI ------------------------------------------------------------ KHSLSITLKHFYPFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNC -----------------------------------------------------------1 DKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAW ------------------------------------------------------------ TSIARSGNNDESFLANGTRPLYDRIIKYPLDEAYLKRAKVESFNEDYVTQSLAGPSDKLR ------------------------------------------------------------ ATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSRNDKLQLFGFPIDRRA ------------------------------------------------------------ RKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDNDL ------------------------------------------------------------ VSEGPTTTWVSGTPKLRFYDDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCIS ---------------------------------------------------------1-- ATQEDFVHIFDDGL -------------- >Reelin; SWP:Q60841; PDB:2E26A VLLLDTFDFGPREDNWFFYPGGNIGLYCPYSSKGAPEEDSAMVFVSNEVGEHSITTRDLS ---------------------------1-------------------------------- VNENTIIQFEINVGCSTDSSSADPVRLEFSRDFGATWHLLLPLCYHSSSLVSSLCSTEHH --------------1----------------------------2----------2----- PSSTYYAGTTQGWRREVVHFGKLHLCGSVRFRWYQGFYPAGSQPVTWAIDNVYIGPQCEE ---------------------------------------------------------3-- MCYGHGSCINGTKCICDPGYSGPTCKISTKNPDFLKDDFEGQLESDRFLLMSGGKPSRKC -4-----3-----4-5--------5----------------------------------6 GILSSGNNLFFNEDGLRMLVTRDLDLSHARFVQFFMRLGCGKGVPDPRSQPVLLQYSLNG ---------------------------------------6-------------------- GLSWSLLQEFLFSNSSNVGRYIALEMPLKARSGSTRLRWWQPSENGHFYSPWVIDQILIG ------------------------------------------------------------ GNISGNTVLEDDFSTLDSRKWLLHPGGTKMPVCGSTGDALVFIEKASTRYVVTTDIAVNE --------------------------------7--------------------------- DSFLQIDFAASCSVTDSCYAIELEYSVDLGLSWHPLVRDCLPTNVECSLQRILVSDTFNK -----------7-----8------------------------------------------ WTRITLPLPSYTRSQATRFRWHQPAPFDKQQTWAIDNVYIGDGCLDMCSGHGRCVQGSCV -------------------------------------------9---a-----9----a- CDEQWGGLYCDEPETSLPTQLKDNFNRAPSNQNWLTVSGGKLSTVCGAVASGLALHFSGG b--------b-----------------------------------c-------------- CSRLLVTVDLNLTNAEFIQFYFMYGCLITPSNRNQGVLLEYSVNGGITWNLLMEIFYDQY 8------------------------c---------------------------------- SKPGFVNILLPPDAKEIATRFRWWQPRHDGLDQNDWAIDNVLISR --------------------------------------------- >Lymphocyte antigen 96; SWP:Q9Y6Y9; PDB:2E56A EAQKQYWVCNSSDASISYTYCDKMQYPISINVNPCIELKGSKGLLHIFYIPRRDLKQLYF --------1-----------2-------------1------------------------- NLYITVNTMNLPKRKEVICRGSDDDYSFCRALKGETVNTTISFSFKGIKFSKGKYKCVVE ------------------3---------3------------------------------- AISGSPEEMLFCLEFVILHQPNSN -----------2------------ >T cell receptor alpha chain; SWP:NA; PDB:2E7LA QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQLLLKYYSGDPVVQGVN ---------------------1-------------------------------------- GFEAEFSKSNSSFHLRKASVHRSDSAVYFCAVSHQGRYLTFGSGTKVIVLPY -----------------------------1---------------------- >Chymotrypsin; SWP:NA; PDB:2EA3A FDVIGGNAYTIGGRSRCSIGFAVNGGFITAGHCGRTGATTANPTGTFAGSSFPGNDYAFV ----------------1---------------1--------------------------- RTGAGVNLLAQVNNYSGGRVQVAGHTAAPVGSAVCRSGSTTGWHCGTITALNSSVTYPEG ----------------------------------2---------2--------------- TVRGLIRTTVCAEPGDSGGSLLAGNQAQGVTSGGSGNCRTGGTTFFQPVNPILQAYGLRM ----------3--------------------------3---------------------- ITT --- >Alpha-fucosidase; SWP:Q6JV24; PDB:2EABA GDGDTSKDDWLWYKQPASQTDATATAGGNYGNPDNNRWQQTTLPFGNGKIGGTVWGEVSR ------------------------------------------------------------ ERVTFNEETLWTGGPGSSTSYNGGNNETKGQNGATLRALNKQLANGAETVNPGNLTGGEN ------------------------------------------------------------ AAEQGNYLNWGDIYLDYGFNDTTVTEYRRDLNLSKGKADVTFKHDGVTYTREYFASNPDN ------------------------------------------------------------ VMVARLTASKAGKLNFNVSMPTNTNYSKTGETTTVKGDTLTVKGALGNNGLLYNSQIKVV ------------------------------------------------------------ LDNGEGTLSEGSDGASLKVSDAKAVTLYIAAATDYKQKYPSYRTGETAAEVNTRVAKVVQ ------------------------------------------------------------ DAANKGYTAVKKAHIDDHSAIYDRVKIDLGQSGHSSDGAVATDALLKAYQRGSATTAQKR ------------------------------------------------------------ ELETLVYKYGRYLTIGSSRENSQLPSNLQGIWSVTAGDNAHGNTPWGSDFHMNVNLQMNY ------------------------------------------------------------ WPTYSANMGELAEPLIEYVEGLVKPGRVTAKVYAGAETTNPETTPIGEGEGYMAHTENTA ------------------------------------------------------------ YGWTAPGQSFSWGWSPAAVPWILQNVYEAYEYSGDPALLDRVYALLKEESHFYVNYMLHK ------------------------------------------------------------ AGSSSGDRLTTGVAYSPEQGPLGTDGNTYESSLVWQMLNDAIEAAKAKGDPDGLVGNTTD ------------------------------------------------------------ CSADNWAKNDSGNFTDANANRSWSCAKSLLKPIEVGDSGQIKEWYFEGALGKKKDGSTIS 1-----------------------1----------------------------------- GYQADNQHRHMSHLLGLFPGDLITIDNSEYMDAAKTSLRYRCFKGNVLQSNTGWAIGQRI ------------------------------------------------------------ NSWARTGDGNTTYQLVELQLKNAMYANLFDYHAPFQIDGNFGNTSGVDEMLLQSNSTFTD ------------------------------------------------------------ TAGKKYVNYTNILPALPDAWAGGSVSGLVARGNFTVGTTWKNGKATEVRLTSNKGKQAAV ------------------------------------------------------------ KITAGGAQNYEVKNGDTAVNAKVVTNADGASLLVFDTTAGTTYTITKK ------------------------------------------------ >Peptidoglycan recognition protein-I-beta; SWP:Q3B822; PDB:2EAXA CPGIVPRSVWGARETHCPRMTLPAKYGIIIHTAGRTCNISDECRLLVRDIQSFYIDRLKS 1---------------2-------------------3-----3----------------- CDIGYNFLVGQDGAIYEGVGWNVQGSSTPGYDDIALGITFMGTFTGIPPNAAALEAAQDL 2----------------------------------------------------------- IQCAMVKGYLTPNYLLVGHSDVARTLSPGQALYNIISTWPHFKH --1----------------------------------------- >Mast/stem cell growth factor receptor; SWP:P10721; PDB:2EC8A LCVLLLLLEPSPPSIHPGKSDLIVRVGDEIRLLCTDPGFVKWTFEILDETNENKQNEWIT ---------------------------------1-------------------------- EKAEATNTGKYTCTNKHGLSNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVT ------------1--------------------------------------2-------- NYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDSVLSEKFILKVRPAF ------3-------------------------------3--2------------------ KAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFN ------------------------4----------------------------------- YERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDG ---------------------4-------------------------------------- ENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGG ------------------------------------------------------------ TYTFLVSNSDVNAAIAFNVYVNTKPEILTYDRLVNGMLQCVAAGFPEPTIDWYFCVLPVD ---------------------------------------5-------------------- VQTLNSGPPFGKLVVQSSIDSSAFKHCKAYNDVGKTSAYFNFAF --------------------------5----------------- >Roundabout homolog 2; SWP:Q9HCK4; PDB:2EDJA GSSGSSGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQE -----------------------------1------------------------------ QGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESG ------------------1--------------------- >Hypothetical protein AQ_1549; SWP:O67503; PDB:2EGTA MEVKEVELELSSEATFLSKTSIGEITAGEKGLNPMELLLVSIGSCSGVDVYHILKKKRQE --------------------------------------------1--------------- VKDIKIFLKGKRREKHPKIYEEIEIKYVAVGKVEEKALEQAVKLSTEKYCSVLAMVKPST -------------------------------------------------1---------- NLKISWEVKWEE ------------ >Acetylornithine aminotransferase; SWP:O66442; PDB:2EH6A TYLMNNYARLPVKFVRGKGVYLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKL ------------------------------------------------------------ LHVSNLYENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKF ------------------------------------------------------------ ISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLDEETAGIIIEV ------------------------------------------------------------ IQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALA ------------------------------------------------------------ KGLGGGVPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGN ------------------------------------------------------------ YFKEKLKELGKGKVKGRGLMLGLELERECKDYVLKALEKGLLINCTAGKVLRFLPPLIIQ ----------------------------1---------------1--------------- KEHIDRAISVLREIL --------------- >CUB and sushi domain-containing protein 1; SWP:Q96PZ7; PDB:2EHFA GSSGSSGEIEKGGCGDPGIPAYGKRTGSSFLHGDTLTFECPAAFELVGERVITCQQNNQW -------------1-------------------------2-------------1------ SGNKPSCSGPSSG ------2------ >ribonuclease HI; SWP:Q973Z8; PDB:2EHGA MIIGYFDGLCEPKNPGGIATFGFVIYLDNRKIEGYGLAEKPFSINSTNNVAEYSGLICLM ---------------------------------------------------------1-- ETMLRLGISSPIIKGDSQLVIKQMNGEYKVKAKRIIPLYEKAIELKKKLNATLIWVPREE ------------------------------------------------------------ NKEADRLSRVAYELVRRGKLRDIGCIILT ------------------------1---- >IGG2A MONOCLONAL ANTIBODY (HEAVY CHAIN); SWP:NA; PDB:1EJOH QMLVESGGDLVKPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVATISSGGAYTYYP --------------------1--------------------------------------- DSVKGRFTISDDNAESTLYLQMSSLRSEDTAMYYCVRRAFDSDVGFASWGHRTLVTVSAA ----------------------------------1------------------------- KTTAPSVYPLAPVCGSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSS --------------------2--------------------------------------- SVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR ---------------2------------------ >Tryptophan synthase alpha chain; SWP:O67502; PDB:2EKCA MGRISDKFTELKEKREKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVAD ------------------------------------------------------------ GPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSRE ------------------------------------------------------------ KGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVT ----------------------------------------------1------------- GYERIKKKVEEYRELCDKPVVVGFGVSKKEHAREIGSFADGVVVGSALVKLAGQKKIEDL ---------------1-------------------------------------------- GNLVKELKEGLRE ------------- >IGG ANTIBODY (LIGHT CHAIN); SWP:NA; PDB:1EMTL DIQMTQTTSSLSASLGDRVTFSCSASQDISNYLNWYQQKPDGTIKLLIYYTSSLRSGVPS ----------------------1------------------------------------- RFSGSGSGTDYSLTINNLEPEDIATYFCQQYSRLPFTFGSGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >Roundabout homolog 1; SWP:Q9Y6N7; PDB:2EO9A GSSGSSGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLE -----------------------------1------------------------------ NGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAP ------------------1--------------------------------------- >HLA class I histocompatibility antigen, alpha chain E; SWP:P13747; PDB:2ESVA SHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWD ------------------------------------------------------------ RETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGCELGPDRRFLRGYEQFAYDGK ---------------------------------------1-------------------- DYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLH ------------------------------------------1----------------- LEPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQQDTELVETRPAGDGTFQKWAAVV ---------------------2-------------------------------------- VPSGEEQRYTCHVQHEGLPEPVTLRWKP ----------2----------------- >FAB NC10.14 - LIGHT CHAIN; SWP:NA; PDB:1ETZA FAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYAIWVQEKPDHLFSGLIGGTNNRVPGV ---------------------1-------------------------------------- PARFSGSLIGDKAALTVTGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLGQPKSSPSVTL -----------------------------1------------------------------ FTPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSY ----------------2------------------------------------------- LTLTARAWERHSSYSCQVTHEGHTVEKSLSRAECS ---------------2------------------- >FAB NC10.14 - HEAVY CHAIN; SWP:NA; PDB:1ETZB QVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGEGLEWLADIWWNDKKY ---------------------1-------------------------------------- YNPSLKSRLTVSKDTSSNQVFLKITSVDTSDTATYHCARRTFSYYYGSSFYYFDNWGQGT ------------------------------------1----------------------- TLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFP --------------------------------2--------------------------- ALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGP ---------------------------2-------------------- >PLATELET FACTOR 4; SWP:P02776; PDB:1F9QA DLQCLCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKIIKK ---1-2-----------------------1---------------2-------------- LLES ---- >IGA-KAPPA J539 FAB (LIGHT CHAIN); SWP:NA; PDB:2FBJL EIVLTQSPAITAASLGQKVTITCSASSSVSSLHWYQQKSGTSPKPWIYEISKLASGVPAR ----------------------1------------------------------------- FSGSGSGTSYSLTINTMEAEDAAIYYCQQWTYPLITFGAGTKLELKRADAAPTVSIFPPS --------------------------1--------------------------------- SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTL ------------2----------------------------------------------- TKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC ------------2-------------------- >uncharacterized protein; SWP:Q4MWP8; PDB:3DBYA NYEESALFEHQFWLKVLTDHAQFLLDALAPKEKEDIKKATYFVETFTNLLNKVRNVNLMA ------------------------------------------------------------ FSKEAEQAAKEIRAFKLNIIQKQLEGKITIHFTPTFINHMVNEVEEYIAVLEFLKKGEVP ------------------------------------------------------------ PVFHELHYHLVWLTDAAGHAGSISGGLDLVEKRLKEKSEEFTKHFEQFYLKAVEMTGYLR ------------------------------------------------------------ TELHHFPALKKFTKDVSLELKLFSHFLHEVEELELSNEVLSVLSARMADHMAREECYYLL -------------------------------------------------------1---- KLAQSSGLEMPKCNPLE ------------1---- >NEURAL CELL ADHESION MOLECULE 2; SWP:O15394; PDB:2V5TA SMLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYTTISDNRFAMLANNNLQILNIN -----------------------1------------------------------------ KSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGS --------1---------------------------------------------2----- PEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQ -------------------------------------------2---------------- VFVQ ---- >DEFENSIN, MUTANT DEF-ACAA; SWP:Q17027; PDB:2NZ3A ATCDLASIFNVNHALCAAHCIARRYRGGYCNSKAVCVCRN --1------------2---3---------1-----2-3-- >OmTx1; SWP:NA; PDB:1WQCA DPCYEVCLQQHGNVKECEEACKHPVE --1---2---------2---1----- >OVOTRANSFERRIN; SWP:P02789; PDB:1AIVA APPKSVIRWCTISSPEEKKCNNLRDLTQQERISLTCVQKATYLDCIKAIANNEADAISLD ---------1---------2---------------2--------1--------------- GGQAFEAGLAPYKLKPIAAEVYEHTEGSTTSYYAVAVVKKGTEFTVNDLQGKTSCHTGLG ------------------------------------------------------3----- RSAGWNIPIGTLLHRGAIEWEGIESGSVEQAVAKFFSASCVPGATIEQKLCRQCKGDPKT ---------------------------------------4----------5--4------ KCARNAPYSGYSGAFHCLKDGKGDVAFVKHTTVNENAPDQKDEYELLCLDGSRQPVDNYK -5--------------3------------------------------6------------ TCNWARVAAHAVVARDDNKVEDIWSFLSKAQSDFGVDTKSDFHLFGPPGKKDPVLKDLLF -6---------------------------------------------------------- KDSAIMLKRVPSLMDSQLYLGFEYYSAIQSMRKDQLTPSPRENRIQWCAVGKDEKSKCDR -----------------------------------------------7---------8-- WSVVSNGDVECTVVDETKDCIIKIMKGEADAVALDGGLVYTAGVCGLVPVMAERYDDESQ ----------8--------7------------------------9--------------- CSKTDERPASYFAVAVARKDSNVNWNNLKGKKSCHTAVGRTAGWVIPMGLIHNRTGTCNF a--------------------------------b-----------------------c-- DEYFSEGCAPGSPPNSRLCQLCQGSGGIPPEKCVASSHEKYFGYTGALRCLVEKGDVAFI -------d----------e--d----------e----------------b---------- QHSTVEENTGGKNKADWAKNLQMDDFELLCTDGRRANVMDYRECNLAEVPTHAVVVRPEK -----------------------------f-------------f---------------- ANKIRDLLERQEKRFGVNGSEKSKFMMFESQNKDLLFKDLTKCLFKVREGTTYKEFLGDK ------------------------------------------a----------------- FYTVISSLKTCNPSDILQMCSFLEGK ----------c--------9------ >TAIL PROTEIN, 43 KDA; SWP:Q9JZC8; PDB:3D37A YGYAVSVRVGGKEHRHWERYDIDSDFLIPADSFDFVIGRPDLSGESCEVVIDGQIVMTGI ------------------------------------------------------------ IGSQRHGKSKGSRELSLSGRDLAGFLVDCSAPQLNVKGMTVLDAAKKLAAPWPQIKAVVL ------------------------------------------------------------ KAENNPALGKIDIEPGETVWQALTHIANSVGLHPWLEPDGTLVVGGADYSSPPVATLCWS ---------------------------------------------------------1-- RTDSRCNIERMDIEWDTDNRFSEVTFLAQSHGHDLKWVYKDPTMTLHRPKTVVVSDNLAA -----1------------------------------------------------------ LQKQAKKQLADWRLEGFTLTITVGGHKTRDGVLWQPGLRVHVIDDEHGIDAVFFLMGRRF ------------------------------------------------------------ MLSRMDGTQTELRLKEDGIWTPDAYP -------------------------- >CD4M33, SCORPION-TOXIN MIMIC OF CD4; SWP:NA; PDB:1YYLM NLHFCQLRCKSLGLLGKCAGSCAC ----1---2------------1-2 >OSTEOCALCIN; SWP:P02820; PDB:1Q3MA LPKRVCLNPDCDELADHIGFQEAYRRFYGPV -----1----1-------------------- >OMEGA-ATRACOTOXIN-HV1A; SWP:P56207; PDB:1HVWA CIPSGQPCPYNENCCSQSCTGGRCD 1------2-----31---2----3- >DIPETALIN; SWP:O96790; PDB:1KMAA FQGNPCECPRALHRVCGSDGNTYSNPCMLTCAKHEGNPDLVQVHEGPCDEHDHDF -----1-2-------3----------2---1----------------3------- >LUTHERAN BLOOD GROUP GLYCOPROTEIN; SWP:P50895; PDB:2PETA EVRLSVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVT ---------------------1-------------------------------------- MHDTRGRSPPYQLDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATE ---------------------------------1-------------------------- VSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVRE --------------------2--------------------------------------- ASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTLHY -------------------------2------------------------- >THE FAB FRAGMENT OF CHIMERIC 2H7, HEAVY CHAIN; SWP:NA; PDB:3BKYH QAYLQQSGAELVRPGASVKMSCKASGYTFTSYNMHWVKQTPRQGLEWIGAIYPGNGDTSY ---------------------1-------------------------------------- NQKFKGKATLTVDKSSSTAYMQLSSLTSEDSAVYFCARVVYYSNSYWYFDVWGTGTTVTV -----------------------------------1------------------------ SAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQ ----------------------------2------------------------------- SSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD ------------------------2--------------------- >NLGN1 PROTEIN; SWP:Q4KMN5; PDB:3B3QA DPLVTTNFGKIRGIKKELNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPSPWSDIRNAT ------------------------------------------------------------ QFAPVCPQNIIDGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDGGPKPVM -----1-----------------------------------1------------------ VYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQ ------------------------------------------------------------ ALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEGLFQRAIAQSGTALSSWAV ------------------------------------------------------------ SFQPAKYARILATKVGCQVSDTVELVECLQKKPYKELVDQDVQPARYHIAFGPVIDGDVI ----------------2----------2-------------------------------- PDDPQILMEQGEFLNYDIMLGVNQGEGLKFVENIVDSDDGVSASDFDFAVSNFVDNLYGY ------------------------------------------------------------ DVLRETIKFMYTDWADRHNPETRRKTLLALFTDHQWVAPAVATADLHSNFGSPTYFYAFY ------------------------------------------------------------ HHCQTDQVPAWADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKT --3---------------------------------3----------------------- GDPNQPVPQDFEEVAWTRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHN -------------------------------------------------------- >ALPHA TRYPSIN; SWP:P00761; PDB:1AKSA IVGGYTCAANSIPYQVSLNSGSHFCGGSLINSQWVVSAAHCYKSRIQVRLGEHNIDVLEG ------------------------1---------------1------------------- NEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPRSCAAAGTECLISG ------------------------------------------------------------ WGNTK ----- >CEL61B; SWP:NA; PDB:2VTCA HGQVQNFTINGQYNQGFILDYYYQKQNTGHFPNVAGWYAEDLDLGFISPDQYTTPDIVCH ----------------------------------------------------------1- KNAAPGAISATAAAGSNIVFQWGPGVWPHPYGPIVTYVVECSGSCTTVNKNNLRWVKIQE ----------------------------------------2---2--------------- AGINYNTQVWAQQDLINQGNKWTVKIPSSLRPGNYVFRHELLAAHGASSANGMQNYPQCV ----------------------------------------------------------1- NIAVTGSGTKALPAGTPATQLYKPTDPGILFNPYTTITSYTIPGPALW ------------------------------------------------ >E109 ZETA PEPTIDE; SWP:NA; PDB:1KCNA ALCPAVCYVGGKALCPDVCYV --1---2-------2---1-- >PROTEIN (PEPTIDE V108); SWP:NA; PDB:1VPPX RGWVEICAADDYGRCLTEAQ ------1-------1----- >ADAMTS-1; SWP:Q9UHI8; PDB:2JIHA SHRYVETMLVADQSMAEFHGSGLKHYLLTLFSVAARLYKHPSIRNSVSLVVVKILVIHDE ------------------------------------------------------------ QKGPEVTSNAALTLRNFCNWQKQHNPPSDRDAEHYDTAILFTRQDLCGSQTCDTLGMADV -----------------1----------------------------2----2-------- GTVCDPSRSCSVIEDDGLQAAFTTAHELGHVFNMPHDDAKQCASLNDSHMMASMLSNLDH ---3-----1-------------------------------4------------------ SQPWSPCSAYMITSFLDNGHGECLMDKPQNPIQLPGDLPGTSYDANRQCQFTFGEDSKHC ------4---------------3-------------------------5----------6 PTCSTLWCTGVLVCQTKHFPWADGTSCGEGKWCINGKCVNKLVP --7----5-----6------------8-----7----8------ >MU-CONOTOXIN GIIIB; SWP:P01524; PDB:1GIBA RDCCTRKCKDRRCKMKCCA --12---3----1---23- >NICOTINAMIDE-NUCLEOTIDE ADENYLYLTRANSFERASE; SWP:Q5NHR1; PDB:2QJTB MYDISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNTPNIKNPFSFEQRKQMIES ------------------------------------------------------------ DLQVAGIDLDTVVIEPLADYFYQEQKWQDELRKNVYKHAKNNNSIAIVGHIKDSSSYYIR ------------------------------------------------------------ SFPEWDYIGVDNYKNFNATEFRQKFYNGIISKQYMCSNDPKLGTYNFLTKFMDTQVYQDL ------------------------------------------------------------ VAENNYVIEYKRLWLKAPFKPNFVTVDALVIVNDHILMVQRKAHPGKDLWALPGGFLECD ------------------------------------------------------------ ETIAQAIIRELFEETNINLTHEQLAIAKRCEKVFDYPDRSVRGRTISHVGLFVFDQWPSL -----------------------------1------------------------------ PEINAADDAKDVKWISLGSNIKNICDRMLEDHYQIITILLEECG ------------------------------------------1- >CONOTOXIN PL14A; SWP:NA; PDB:2FQCA FPRPRICNLACRAGIGHKYPFCHCR ------1---2----------1-2- >INSULIN A; SWP:P01308; PDB:1JCAA GIVEQCCKSICSLYQLENYCN -----1----1---------- >PROTEIN (ELASTASE); SWP:P08246; PDB:1B0FA IVGGRRARPHAWPFMVSLQLAGGHFCGATLIAPNFVMSAAHCVANVNV -------------------------1---------------1------ >PENAEIDIN-3A; SWP:P81058; PDB:1UEOA QVYKGGYARPIPRPPPFVRPLPGGPIGPYNGCPVSCRGISFSQARSCCSRLGRCCHVGKG -------------------------------1---2----------13-----23----- YSG --- >CYSTEINE-RICH SECRETORY PROTEIN-2; SWP:P16562; PDB:2CQ7A GSSGSSGSCQYQDLLSNCDSLKNTAGCEHELLKEKCKATCLCESGPSSG --------1--------2--------3--------2---3-1------- >THROMBOMODULIN; SWP:P07204; PDB:1ADXA QMFCNQTACPADCDPNTQASCECPEGYILDDGFICTDIDE ---1----1---2-------2-3-----------3----- >DNA POLYMERASE; SWP:P61875; PDB:2JGUA MILDVDYITEEGKPVIRLFKKENGKFKIEHDRTFRPYIYALLRDDSKIEEVKKITGERHG ------------------------------------------------------------ KIVRIVDVEKVEKKFLGKPITVWKLYLEHPQDVPTLREKVREHPAVVDIFEYDIPFAKRY ------------------------------------------------------------ LIDKGLIPMEGEEELKILAFDIETLYHEGEEFGKGPIIMISYADENEARVITWKNIDLPY ------------------------------------------------------------ VESVSTEKEMIKRFLRIIREKDPDIIVTYNGDSFDFPYLAKRAEKLGIKLTIGRDGSEPK ------------------------------------------------------------ MQRIGDMTAVEVKGRIHFDLYHVIRTTINLPTYTLEAVYEAIFGKPKEKVYADEIAKAWE ------------------------------------------------------------ SGENLERVAKYSMEDAKATYELGKEFLPMEIQLSRLVGQPLWDVSRSSTGNLVEWFLLRK ------------------------------------------------------------ AYERNEVAPNKPSEEEYQRRLRESYTGGFVKEPEKGLWENIVYLDYKSLYPSIIITHNVS ------------------------------------------------------------ PDTLNLEGCKNYDIAPQVGHKFCKDIPGFIPSLLGHLLEERQKIKTKMKETQDPIEKILL --------1-------------1------------------------------------- DYRQKAIKLLANSFYGYYGYAKARWYCKECAESVTAWGRKYIELVWKELEEKFGFKVLYI --------------------------2--2------------------------------ DTDGLYATIPGGESEEIKKKALEFVKYINSKLPGLLELEYEGFYKRGFFVTKKRYAVIDE ------------------------------------------------------------ EGKVITRGLESEIAKETQARVLETILKHGDVEEAVRIVKEVIQKLANYEIPPEKLAPHVA ------------------------------------------------------------ VAKKLAAKGVKIKPGMVIGYIVDAEYYIENQVLPAVLRILEGFGYRKEDLRY ---------------------------------------------------- >DNA-DIRECTED RNA POLYMERASE SUBUNIT D; SWP:P95989; PDB:2PA8D SINLLHKDDTRIDLVFEGYPLEFVNAIRRASMLYVPIMAVDDVYFIENNSPLYDEILAHR ------------------------------------------------------------ LALIPFMSEEALDTYRWPEECIECTENCEKCYTKIYIEAEAPNEPRMIYSKDIKSEDPSV --------------------1--2---2--1----------------------------- VPISGDIPIVLLGTNQKISLEARLRLGYGKEHAKFIPVSLSVVRYYPKVEILANCEKAVN ------------------------------------------------------3----- VCPEGVFELKDGKLSVKNELSCTLCEECLRYCNGSIRISFVEDKYILEIESVGSLKPERI -------------------------------3---------------------------- LLEAGKSIIRKIEELEKKLVEVVK ------------------------ >FACTOR IXA; SWP:P16293; PDB:1PFXC IVGGENAKPGQFPWQVLLNGKIDAFCGGSIINEKWVVTAAHCIEPGVKITVVAGEYNTEE -------------------------1---------------1------------------ TEPTEQRRNVIRAIPHHSYNATA ----------------------- >XYLANASE; SWP:P23360; PDB:1TUXA AAAQSVDQLIDARGKVYFGVATDQNRLTTGKNAAIIQADFGQVTPENSMKWDATEPSQGN ------------------------------------------------------------ FNFAGADYLVNWAQQNGKLIRGHTLVWHSQLPSWVVSITDKNTLTNVMKNHITTIMTRYI ------------------------------------------------------------ GKIRAWDVVNEAFNEDGSLRQTVFNNVIGEDYIPIAFRTARAADPNAKLYINDYNLDSAS ------------------------------------------------------------ KPKTSAIVKRVKKWRAAGVPIDGIGSQTHLSAGQGASIDAALPNLASAGTPEVAITELDI ------------------------------------------------------------ AGATSTDYVDVVNACLDVDSCIGITVWGVADPDSWRASTTPLLFDGNFNPKPAYNAIVQL --------------1-----1--------------------------------------- L - >CIRCULARLY PERMUTED; SWP:P23904; PDB:1CPMA FDCAEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTKV --1--------------------------------------------------------- QFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGK ------------------------------------------------------------ IMMNLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNQTGGSFFEPFNSYNSGTWEKADGY ------------------------------------------------------------ SNGGVFNCTWRANNVNFTNDGKLKLGLTSSAYNA -------1-------------------------- >ENDO-PECTATE LYASE; SWP:O50325; PDB:3B4NA AQTTLMLSQKSDVNYLGWSTDESKVARQEVYRGTTSNPDLRERIAVLDAETRTFKDADTN ------------------------------------------------------------ SGLNYWYWVDVVSENQAQVVSNAVTTAPSECKPGATFENRTVDCGGVTIGTSCPNDSDKQ ------------------------------1------------1--------2------- KPLIILKNATVKNLRISASGGADGIHCDSGNCTIENVIWEDICEDAATNNGKTMTIVGGI --------------------------3----3----------2----------------- AHNAKDGYGGKPDKVLQHNSKNSTTVVKGNFTLTGEHGKLWRSCGDCSNNGGPRFLTVTS -------------------------------------------4--4------------- ATVNGTIDSIAGVNRNYGDVATISGLKIKNYKEGKPPVCEEFKGVVKGQGSTEKYGEKWD --------------------------------------5--------------------- TTNCKVSRSGVSKL ---5---------- >PUTATIVE TRANSGLYCOSYLASE; SWP:Q9A226; PDB:3CZBA MPAALSFAGLAGWAEEDHLAALNAFRAGCGVSKDPAAARVCGLAKATKDLDVSGAKAFIE ----------------------------1-----------1------------------- ANFRVEAVDGGGDGLLTAYFAPQYEARMSRNAEFSAPLRGLPADLVVLDLGPFEPALVGK ------------------------------------------------------------ KITGHVEGSTFVPYPDRAEIEATPSDKPLAWMRPEELFFLQIQGSGVLVLPDGRRVRAVF ------------------------------------------------------------ AGTNGKPFVGIAIAMRDKGLLADAIRTWLAEHRGPEADAIMRLNPRYVFFRTVPDDGKEP ------------------------------------------------------------ AGAAGVALPPGRAIAVDPGYHAYGGFYWLDAAFPVYRRAVTALDTGGAIKGEVRADLYMG ------------------------------------------------------------ SGAVAGVEAGRVRHTLRLYRLTPNP ------------------------- >ACTINIDAIN PRECURSOR; SWP:P00785; PDB:2ACTA LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKITSGSLISLSEQELIDCGRTQ ---------------------1---------------------------------2---- NTRGCDGGYITDGFQFIINDGGINTEENYPYTAQDGDCDVALQDQKYVTIDTYENVPYNN ----1--------------------------------2---------------------- EWALQTAVTYQPVSVALDAAGDAFKQYASGIFTGPCGTAVDHAIVIVGYGTEGGVDYWIV -----------------------------------3------------------------ KNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPVKY -------------------------3------------ >SIGNAL-REGULATORY PROTEIN BETA 1.; SWP:Q5TFQ8; PDB:2JJVA ELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQHFPRVTTVSD ----------------------1------------------------------------- LTKRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVR -------------------------1------------------------ >SIGNAL REGULATORY PROTEIN BETA-1; SWP:O00241; PDB:2JJUA ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTT ----------------------1------------------------------------- VNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA ---------------------1------------------------- >CD44 ANTIGEN; SWP:Q16208; PDB:1POZA AQIDLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRY --------1------------------------2-----------------------3-- GFIEGHVVIPRIHPNSICAANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAF -----------------3--------------------2----------1---------- DGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDV --------------------------------------- >VACUOLATING CYTOTOXIN; SWP:Q48245; PDB:2QV3A TVVNIDRINTKAASLTTNAAHLNIGKGGVNLSNQASGRTLLVENLTGNITVDGPLRVNNQ ------------------------------------------------------------ VGGYALAGSSANFEFKAGVDTKNGTATFNNDISLGRFVNLKVDAHTANFKGIDTGNGGFN ------------------------------------------------------------ TLDFSGVTNKVNINKLITASTNVAVKNFNINELIVKTNGVSVGEYTHFSEDIGSQSRINT ------------------------------------------------------------ VRLETGTRSIFSGGVKFKSGEKLVIDEFYYSPWNYFDARNIKNVEITRKFASSTPENPWG ------------------------------------------------------------ TSKLMFNNLTLGQNAVMDYSQFSNLTIQGDFINNQGTINYLVRGGKVATLNVGNAAAMMF ------------------------------------------------------------ NNDIDSATGFYKPLIKINSAQDLIKNTEHVLLKAKIIGYGNVSTGTNGISNVNLEEQFKE ------------------------------------------------------------ RLALYNNNNRMDTCVVRNTDDIKACGMAIGNQSMVNNPDNYKYLIGKAWKNIGISKTANG -------------1----------1----------------------------------- SKISVYYLGNSTPTENGGNTTNLPTNT --------------------------- >ROUNDABOUT 1; SWP:O44924; PDB:2VR9A QYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDG -------------------------1---------------------------------- ALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGET --------------------1--------------------------------------- ALLECGPPKGIPEPTLIWIKDGVPLDDLKAMASSRVRIVDGGNLLISNVEPIDEGNYKCI ----2-----------------------------------------------------2- AQNLVGTRESSYAKLIVQV ------------------- >PEPTIDE 2G12.1 (ACPPSHVLDMRSGTCLAAEGK); SWP:NA; PDB:2OQJC ACPPSHVLDMRSGTCLAA -1------------1--- >MIP-1A; SWP:P10147; PDB:1B50A SLAADTPTACCFSYTSRQIPQNFIAAYFETSSQCSKPGVIFLTKRSRQVCADPSEEWVQK ---------12----------------------1---------------2---------- YVSDLELSA --------- >FV ANTIBODY FRAGMENT; SWP:NA; PDB:1F3RB QVQLLESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYN ---------------------1-------------------------------------- SALKSRLSISRDTSKNQVFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVT ----------------------------------1------------------------- VSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGE ------------------------------------------------------------ APKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTK ------------------------------------------------------------ LELKAAEQKLISEEDLN ----------------- >TOXIN ADO1; SWP:P58608; PDB:1LMRA ADDDCLPRGSKCLGENKQCCKGTTCMFYANRCVGV ----1------2------31----2------3--- >COAGULATION FACTOR VIII; SWP:P00451; PDB:2R7EA ATRRYYLGAVELSWDYMQSDLGELPVDARFPPRVPKSFPFNTSVVYKKTLFVEFTDHLFN ------------------------------------------------------------ IAKPRPPWMGLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQ ------------------------------------------------------------ REKEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCR --------------------------------1-------------------------1- EGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNAASARAWPKMHTVNGYVNRSLPGLIG ------------------------------------------------------------ CHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNHRQASLEISPITFLTAQTLLMDLGQFL 2----------------------------------------------------------- LFCHISSHQHDGMEAYVKVDSCPEEPQFDDDNSPSFIQIRSVAKKHPKTWVHYIAAEEED ---------------------2-------------------------------------- WDYAPLVLAPDDRSYKSQYLNNGPQRIGRKYKKVRFMAYTDETFKTREAIQHESGILGPL ------------------------------------------------------------ LYGEVGDTLLIIFKNQASRPYNIYPHGITDVRPLYSRRLPKGVKHLKDFPILPGEIFKYK ------------------------------------------------------------ WTVTVEDGPTKSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRN ---------------3-------------------------3------------------ VILFSVFDENRSWYLTENIQRFLPNPAGVQLEDPEFQASNIMHSINGYVFDSLQLSVCLH ---------------------------------------------------------4-- EVAYWYILSIGAQTDFLSVFFSGYTFKHKMVYEDTLTLFPFSGETVFMSMENPGLWILGC ------------------------------------------------------------ HNSDFRNRGMTALLKVSSCDKNTGDYYEDSYED ------------------4-------------- >RIBONUCLEASE; SWP:P84844; PDB:2ZPOA ETRYEKFLRQHVDYPRTAAPDTRTYCNQMMQRRGMTLPVCKFTNTFVHASAASITTICGP -------------------------1-------------2-----------------3-- GGAPAGGNLRDSTASFALTTCRLQGGSQRPPCNYNGGTSTQRIRIACDGGLPVHYDRAI --------------------1----------2--------------3------------ >4F11E12 FAB VARIABLE HEAVY CHAIN REGION; SWP:NA; PDB:1YNTB QVQLQQSGAELVRPGVSVKISCKGSGYTFTDYGMHWVKQSHAKSLEWIGIISTYSGDASY ---------------------1-------------------------------------- NQKFKGKATMTVDKSSSTAYMELARLTSEDSAIYYCARSSTWYYFDYWGQGTTLTVSSAK -----------------------------------1------------------------ TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLY ------------------------2----------------------------------- TLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR -------------------2------------------ >IMMUNOGLOBULIN HEAVY CHAIN FAB FRAGMENT; SWP:NA; PDB:2HKFH EVQVVESGGGLVQPKGSLKLSCVVSGSTLNNYAMNWVRQAPGKGLEWVARIRSKSNNYAT ---------------------1-------------------------------------- YYADSVKDRFTISRDDSQSMIYLQMNNLKTEDTAMYYCVTYGNHPFAYWGQGTLVTVSAA -------------------------------------1---------------------- KTTPPSVYPLAPGCTGSSVTLGCLVKGYFPESVTVTWNSSVHTFPALLQSGLYTMSSSVT ----------------------2------------------------------------- VPSSTWPSQTVTCSVAHPASSTTVDKKLEP ------------2----------------- >THIOREDOXIN DOMAIN-CONTAINING PROTEIN 4; SWP:Q9BS26; PDB:2R2JA TSLDTENIDEILNNADVALVNFYADWCRFSQLHPIFEEASDVIKEEFNQVVFARVDCDQH ------------------------------------------------------------ SDIAQRYRISKYPTLKLFRNGKREYRGQRSVKALADYIRQQKSDPIQEIKRNIIGYFEQK ------------------------------------------------------------ DSDNYRVFERVANILHDDCAFLSAFGDVDNIIYKPPGHSAPDVYLGATNFDVTYNWIQDK ------------------------------------------------------------ CVPLVREITFENGEELTEEGLPFLILFHKEDTESLEIFQNEVARQLISEKGTINFLHADC -----------------------------------------------------------1 DKFRHPLLHIQKTPADCPVIAIDSFRHYVFGDFKDVLIPGKLKQFVFDLHSGKLHREFSS ----------------1------------------------------------------- PPESSFQKLAPSEYRYTLLR -------------------- >SAPOSIN-LIKE PROTEIN FAMILY PROTEIN 5; SWP:Q86FL8; PDB:2JS9A RSALSCQMCELVVKKYEGSADKDANVIKKDFDAECKKLFHTIPFGTRECDHYVNSKVDPI -----1--2-------------------------3-------------3----------- IHELEGGTAPKDVCTKLNECP -------------2-----1- >COMPLEMENT FACTOR MASP-3; SWP:Q96RS4; PDB:3DEMA NMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVETEDQ -----------------------------------------------1------------ VLATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECKE -----1---------------------------------------------------2-- LSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVECSDNLFTQRTGVITSPDFPNPYPKSS --3---2--------3-4------------4---5------------------------- ECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPKVLGPFCGEKAPEPIST -5-----------------------------6-----------------6---------- QSHSVLILFHSDNSGENRGWRLSYRAA --------------------------- >CHOLIX TOXIN; SWP:Q5EK40; PDB:2Q5TA LNIFDECRSPCSLTPEPGKPIQSKLSIPSDVVLDEGVLYYSMTINDEQKGESIITIGEFA ------1---1------------------------------------------------- TVRATRHYVNQDAPFGVIHLDITTENGTKTYSYNRKEGEFAINWLVPIGEDSPASIKISV ------------------------------------------------------------ DELDQQRNIIEVPKLYSIDLDNQTLEQWKTQGNVSFSVTRPEHNIAISWPSVSYKAAQKE ------------------------------------------------------------ GSRHKRWAHWHTGLALCWLVPMDAIYNNCSYETVAGTPKVITVKQGIEQKPVEQRIHFSK ----------------2-----------2------------------------------- GNAMSALAAHRVCGVPLETLARSRKPRDLTDDLSCAYQAQNIVSLFVATRILFSHLDSVF ------------3---------------------3------------------------- TLNLDEQEPEVAERLSDLRRINENNPGMVTQVLTVARQIYNDYVTHHPGLTPEQTSAGAQ ------------------------------------------------------------ AADILSLFCPDADKSCVASNNDQANINIESRSGRSYLPENRAVITPQGVTNWTYQELEAT --------4------4-------------------------------------------- HQALTREGYVFVGYHGTNHVAAQTIVNRIAPVPRGNNTENEEKWGGLYVATHAEVAHGYA ------------------------------------------------------------ RIKEGTGEYGLPTRAERDARGVMLRVYIPRASLERFYRTNTPLENAEEHITQVIGHSLPL ------------------------------------------------------------ RNEAFTGPESAGGEDETVIGWDMAIHAVAIPSTIPGNAYEELAIDEEAVAKEQSISTKPP ------------------------------------------------------------ YKERK ----- >GLYCOPROTEIN D; SWP:P57083; PDB:1JMAA KYALADASLKMADPNRFRGKDLPVLDQLTDPPGVRRVYHIQAGLPDPFQPPSLPITVYYA ------------------------------------------------------------ VLERACRSVLLNAPSEAPQIVRGASEDVRKQPYNLTIAWFRMGGNCAIPITVMEYTECSY -----1---------------------------------------2-----------3-- NKSLGACPIRTQPRWNYYDSFSAVSEDNLGFLMHAPAFETAGTYLRLVKINDWTEITQFI ------3----------------------------------------------------- LEHRAKGSCKYALPLRIPPSACLSPQAYQQGVTVDSIGMLPRFIPENQRTVAVYSLKIAG --------1------------2-------------------------------------- WHGPKAPYTSTLLPPELSE ------------------- >NEUROTOXIN MAGI-5; SWP:P83561; PDB:2GX1A GCKLTFWKCKNKKECCGWNACALGICMPR -1------2-----31----2----3--- >C-C MOTIF CHEMOKINE 5; SWP:P13501; PDB:2VXWA FSPLSSQSSACCFAYIARPLPRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVR ----------12----------------------1---------------2--------- EYINSLEMS --------- >GLUTATHIONE PEROXIDASE-LIKE PROTEIN; SWP:Q869A5; PDB:2RM5A GMGSSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGF -------------------------------------1---------------------- TVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGI -------------------------1---------------------------------- LATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLGSARL ----------------------------------------------- >IMMUNOGLOBULIN HEAVY CHAIN; SWP:NA; PDB:2V7NB VQLVESGGGLVQPGGSLRLSCAASGFTFRNSAMHWVRQAPGKGLEWVSSIWYSGSNTYYA --------------------1--------------------------------------- DSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARFAGGWGAYDVWGQGTLVTVSSAS ----------------------------------1------------------------- TKGPSVFPLAPSSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLS --------------------2--------------------------------------- SVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP ----------------2----------------- >GROWTH-BLOCKING PEPTIDE; SWP:NA; PDB:2DJCA ENFAAGCATGYQRTADGRCKPTF ------1-----------1---- >RIBOSOMAL PROTEIN L37A; SWP:Q5QM99; PDB:1YSHD IVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAY -----------------------------1--2--------------1--2--------- TMNTASAVTVRST ------------- >KALATA-B1; SWP:P56254; PDB:2F2JA CGETCVGGTCNTPGCTCSKNKCTRNGLPV 1---2----3----1-2----3------- >H-2 class II histocompatibility antigen, A-B alpha chain; SWP:P14434; PDB:1LNUA IEADHVGTYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFGQLASFDPQGG ------------------------------------------------------------ LQNIAVVKHNLGVLTKRSNSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINI -----------------------------------------------1------------ TWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWE -------------------------------------------1---------------- PE -- >VALYL-TRNA SYNTHETASE; SWP:P96142; PDB:1GAXA MDLPKAYDPKSVEPKWAEKWAKNPFVANPKSGKPPFVIFMPPPNVTGSLHMGHALDNSLQ ------------------------------------------------------------ DALIRYKRMRGFEAVWLPGTDHAGIATQVVVERLLLKEGKTRHDLGREKFLERVWQWKEE ------------------------------------------------------------ SGGTILKQLKRLGASADWSREAFTMDEKRSRAVRYAFSRYYHEGLAYRAPRLVNWCPRCE ------------------------------------------------------------ TTLSDLEVETEPTPGKLYTLRYEVEGGGFIEIATVRPETVFADQAIAVHPEDERYRHLLG ------------------------------------------------------------ KRARIPLTEVWIPILADPAVEKDFGTGALKVTPAHDPLDYEIGERHGLKPVSVINLEGRM ------------------------------------------------------------ EGERVPEALRGLDRFEARRKAVELFREAGHLVKEEDYTIALATCSRCGTPIEYAIFPQWW ------------------------------------------------------------ LRMRPLAEEVLKGLRRGDIAFVPERWKKVNMDWLENVKDWNISRQLWWGHQIPAWYCEDC --------------------------------------------------------1--- QAVNVPRPERYLEDPTSCEACGSPRLKRDEDVFDTWFSSALWPLSTLGWPEETEDLKAFY --------------------1--------------------------------------- PGDVLVTGYDILFLWVSRMEVSGYHFMGERPFKTVLLHGLVLDEKGQKMSKSKGNVIDPL ------------------------------------------------------------ EMVERYGADALRFALIYLATGGQDIRLDLRWLEMARNFANKLYNAARFVLLSREGFQAKE ------------------------------------------------------------ DTPTLADRFMRSRLSRGVEEITALYEALDLAQAAREVYELVWSEFCDWYLEAAKPALKAG ------------------------------------------------------------ NAHTLRTLEEVLAVLLKLLHPMMPFLTSELYQALTGKEELALEAWPEPGGRDEEAERAFE ------------------------------------------------------------ ALKQAVTAVRALKAEAGLPPAQEVRVYLEGETAPVEENLEVFRFLSRADLLPERPAKALV ------------------------------------------------------------ KAMPRVTARMPLEGLLDVEEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAE ------------------------------------------------------------ EARLKENLEQAERIREALSQIG ---------------------- >Putative iron compound-binding protein of ABC transporter family; SWP:Q8XBR1; PDB:3BE5A EPVQVFTDDLGRKVTVPAHPKRIVSLHDLDITIPLIELGVPPVASHGRTRPDGSHFIRSG ------------------------------------------------------------ ALLTGVDFDNSSIAFIGTADIDIEAIVAAKPDLIITEPTRNTPIERLEKIAPTVSIDHLK ------------------------------------------------------------ GGAPEIYRKLAELTGTQSQLAILERRYQAQINALKATLDSQKITVSVIQANQGKINVHSY ------------------------------------------------------------ HSLGRVLRDAGFRFPPLIESIPEGGRDVSAERLPELDADFVFATWRGDTGGKPQDELATE ------------------------------------------------------------ KVPGWCQFLTACRSGRYVLISREEAISNSFASLGLAAQIQSQIAGRPLP -----1-----1------------------------------------- >PARALYTIC PEPTIDE; SWP:NA; PDB:1V28A ENFAGGCATGFMRTADGRCKPTF ------1-----------1---- >CD4M47, SCORPION-TOXIN MIMIC OF CD4; SWP:NA; PDB:2I5YM NLHFCQLRCKSLGLLGRCATCAC ----1---2-----------1-2 >TYPE-1 FIMBRIAL PROTEIN, A CHAIN; SWP:P04128; PDB:2JTYA AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLND --------------------1--------------------------------------- CDTNVASKAAVAFLGTAIDAGHTNVLALQSSAAGSATNVGVQILDRTGAALTLDGATFSS 1----------------------------------------------------------- ETTLNNGTNTIPFQARYFATGAATPGAANADATFKVQYQGGGGGGAATTVNGGTVHFKGE ------------------------------------------------------------ VVNA ---- >CYCLIC EXTENDED PEP.1; SWP:NA; PDB:2JRWA CAEPMTLPENYFSERPYHPPPPC 1---------------------1 >Tumor necrosis factor ligand superfamily member 18; SWP:Q9UNG2; PDB:2Q1MA PCMAKFGPLPSKWQMASSEPPCVNKVSDWKLEILQNGLYLIYGQVAPNANYNDVAPFEVR -1-------------------1-------------------------------------- LYKNKDMIQTLTNKSKIQNVGGTYELHVGDTIDLIFNSEHQVLKNNTYWGIILLAN -------------------------------------------------------- >MONOCLONAL ANTIBODY FAB FRAGMENT MN423; SWP:NA; PDB:2V17L DVQITQSPSYLAASPGETITINCRASKSIRKFLAWYREKPGKTNKLLIYSGSTLQSGTPS ----------------------1------------------------------------- RFSGSGSGTDFTLTISRLEPEDFAMYYCQQHNDYPLTFGAGTKLELKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >VARIANT SURFACE GLYCOPROTEIN ILTAT 1.24; SWP:P26329; PDB:2JWGA GKSPEAECNKITEEPKCSEEKICSWHKEVKAGEKNCQFNSTKASKS -------1--------2-----1------------2---------- >OREXIN-A; SWP:O43612; PDB:1R02A QPLPDCCRQKTCSCRLYELLHGAGNHAAGILTL -----12----1-2------------------- >NON-SPECIFIC LIPID TRANSFER PROTEIN; SWP:P83210; PDB:1L6HA AGCNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSS --1-------2-------------23--------1-4----------------------- CGIALPTCH 3------4- >Phosphoribosylaminoimidazole carboxylase ATPase subunit; SWP:O66608; PDB:2Z04A LTVGILGGGQLGWTILEGRKLGFKFHVLEDKENAPACRVADRCFRTGQISEFVDSCDIIT ------------------------------------1-----1----------------- YEFEHIKDEVLEKCESKLIPNPQALYVKKSRIREKLFLKKHGFPVPEFLVIPVVIKAEFI ------------------------------------------------------------ IEEFVKFEAEISCIGVRDREGKTYFYPQPFNKHEEGILIYNYVPYAKLKEAEEITKRLEL ------------------------------------------------------------ LDIVGVFTVEFFLLKDGRVLINEFAPRVHNTGHWTLDGAYTSQFENLLRAITEPLGSTEL ------------------------------------------------------------ KLPSGVNILGKSYEEIPLKEILSVEGAKLYWYGKEKKPRRKVGHVNVVGRSKEEVVEKVE ------------------------------------------------------------ RVFTL ----- >TYPE II ANTIFREEZE PROTEIN; SWP:A0ZT93; PDB:2ZIBA HHHALVCPAGWTLHGQRCFYSEATAMTWDLAEANCVNKGGHLASIHSLEEQLYIKDIVAG ------1----------1----------------2------------------------- IVWIGGSACKVAGAWSWTDGTPVDYRTWCPTKPNDILSDCCMQMTAAVDKCWDDLPCPAS --------3-------------------4----------35---------4-----5--- HASICAKAAI ----2----- >OMEGA-CONOTOXIN MVIIA; SWP:P05484; PDB:1DW4A CKGKGAKCSRLMYDCCTGSCRSGKC 1------2------31---2----3 >T-CELL SURFACE GLYCOPROTEIN CD3 EPSILON CHAIN; SWP:P07766; PDB:1XIWA QTPYKVSISGTTVILTCPQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQ ----------------1------------------------------------------- SGYYVCYPRGSKPEDANFYLYLRARVCENCM -----1------------------------- >FOLLISTATIN-LIKE 3; SWP:O95633; PDB:3B4VC GGVCWLQQGQEATCSLVLQTDVTRAECCASGNIDTAWSNLTHPGNKINLLGFLGLVHCLP ---1---------2------------13-----------------------------2-- CKDSCDGVECGPGKACRMPRCECAPDCSGLPARLQVCGSDGATYRDECELRAARCRGHPD 3---4----5-----4----5-6---7---------8----------7------6----- LSVMYRGRCRKSCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQELCGNNNVTY --------8---9----a-----9---------a--b----c----------d------- ISSCHMRQATCFLGRSIGVRHAGSCA ---c------b-------------d- >ABT-007 FAB FRAGMENT; SWP:NA; PDB:2JIXA DIQLTQSPSSLSASVGDRVTITCRASQGIRNDLGWYQQKPGKAPKRLIYAASSLQSGVPS ----------------------1------------------------------------- RFSGSGSGTEFTLTISSLQPEDFATYYCLQHNTYPPTFGQGTKVEIKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC -------------2-------------------- >OMEGA-CONOTOXIN MVIIC; SWP:P37300; PDB:1CNNA CKGKGAPCRKTMYDCCSGSCGRRGKC 1------2------31---2-----3 >6.5 KDA GLYCINE-RICH ANTIFREEZE PROTEIN; SWP:Q38PT6; PDB:2PNEA CKGADGAHGVNGCPGTAGAAGSVGGPGCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVG 1-----------2--------------1--------------2----------------- GRGGKGGSGTPKGADGAPGAP --------------------- >PHOSPHOLIPASE A2 CB1; SWP:P62022; PDB:2QOGB HLLQFNKMIKFETRKNAIPFYAFYGCYCGWGGRGRPKDATDRCCFVHDCCYGKLAKCNTK -------------------------1-2--------------32----45------6--- WDIYPYSLKSGYITCGKGTWCEEQICECDRVAAECLRRSLSTYKYGYMFYPDSRCRGPSE --------------7-----6----7-5------3-------------------1----- TC -4 >SHIKIMATE KINASE; SWP:O67925; PDB:2PT5A RIYLIGFCSGKSTVGSLLSRSLNIPFYDVDEEVQKREGLSIPQIFEKKGEAYFRKLEFEV -------1---------------------------------------------------- LKDLSEKENVVISTGGGLGANEEALNFKSRGTTVFIDIPFEVFLERCKDSKERPLLKRPL ----------------------------------------------1------------- DEIKNLFEERRKIYSKADIKVKGEKPPEEVVKEILLSLEGNAL ------------------------------------------- >CALCITONIN; SWP:P01262; PDB:1BKUA CSNLSTCVLGKLSQELHKLQTYPRTDVGAGTP 1-----1------------------------- >POTASSIUM CHANNEL TOXIN ALPHA-KTX 3.7; SWP:P55896; PDB:2CK4A GVIINVKCKISRQCLKPCKDAGMRFGKCMNGKCHCTPK -------1-----2---3---------1----2-3--- >SUPEROXIDE DISMUTASE [CU-ZN]; SWP:A0ZPR9; PDB:3CE1A IKAIAVLKGDSPVQGVITFTQEGPVTVSGEIKNMDANAQRGFHVHQFGDNSNGCTSAGPH -----------------------------------------------------1------ FNPTGTNHGDRTAEVRHVGDLGNVKTDASGVAKVQISDSQLSLVGPHSIIGRTIVIHAGE ------------------------------------------------------------ DDLGKTDHPESLKTGNAGARSACGVIGIAA ----------------------1------- >CARDIOTOXIN II; SWP:P01442; PDB:1CREA LKCNKLVPLFYKTCPAGKNLCYKMFMVSNLTVPVKRGCIDVCPKNSALVKYVCCNTDRCN --1----------2------1----------------2---3----------34----4- >OMEGA CONOTOXIN SO3; SWP:Q9XZK2; PDB:1FYGA CKAAGKPCSRIAYNCCTGSCRSGKC 1------2------31---2----3 >CONOTOXIN TVIIA; SWP:P58923; PDB:1EYOA SCSGRDSRCVCCMGLMCSRGKCVSIYGE -1------2-31----2----3------ >Viscotoxin A1; SWP:NA; PDB:3C8PA KSCCPSTTGRNIYNTCRLTGSSRETCAKLSGCKIISASTCPSNYPK --12-----------3---------3-----2-------1------ >PLATELET AGGREGATION INHIBITOR DISINTEGRIN; SWP:Q90WC0; PDB:1L3XA EAGEECDCGSPGNPCCDAATCKLRQGAQCAEGLCCDQCRFMKEGTICRRARGDDLDDYCN -----1-2------12----3-------4----53--5--------6-----------4- GISAGCPRNPFHA -----6------- >UNCHARACTERIZED PROTEIN CGL0972; SWP:Q8NRS3; PDB:2VQGA LSPQYNWVACGILEGGLKAAGVLEEGQYNRELAEAIAAKGEGFWTTQFPQIGDWNEDQAA ---------1-------------------------------------------------- ALADRAQTCGLVKADT --------1------- >DEFENSIN; SWP:Q17027; PDB:2NY8X ATCDLASGFGVGSSLCAAHCIARRYRGGYCNSKAVCVCRN --1------------2---3---------1-----2-3-- >GUAMERIN; SWP:P46443; PDB:3BG4D CGEKTCSPAQVCLNNECACTAIRCMIFCPNGFKVDENGCEYPCTCA 1----2-----1----2-3----4---5----------3---4-5- >GINKBILOBIN-2; SWP:A4ZDL6; PDB:2E79A ANTAFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRA ---------1-------------------------------------------------- TCKQSISQSDCTACLSNLVNRIFSICNNAIGARVQLVDCFIQYEQRSF -2--------2--3-----------1------------3--------- >SERINE-REPEAT ANTIGEN PROTEIN; SWP:Q9TY95; PDB:3CH2X NMFCNKEYCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALY ---1----1--------2-----------3----------------2------------- VANCYKGEHKDRCDEGSSPMEFLQIIEDYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLW ---4--------3-----------------------------------4----------- DNGKILHGKGYTAYESERFHDNMDAFVKIIKTEVMNKGSVIAYIKAENVMGYEFSGKKVQ ------------------------------------------------------------ NLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGPTHCHFN --5-----------------------------------------------------5--- FIHSVVIFNVDLPMNN ---------------- >HEI-TOE I; SWP:NA; PDB:1MCVI PCTLEYMRCKQDSDCLAGCVCGPNGFCG -1------2-----3---1-2-----3- >3'-5'-EXONUCLEASE; SWP:A6ZKP4; PDB:3E2VA PLKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTGSSIAESQSAIE ------------------------------------------------------------ LVSSVKDLSPLKLYHTIGVHPCCVNEFAEAYNESLYAKVISNPSFAQGKLKELYDLMNQQ ---------------------11------------------------------------- AKPHDTSFRSIGEIGLDYDRFHYSSKEMQKVFFEEQLKISCLNDKLSSYPLFLHMRSACD ------------------------------------------------------------ DFVQILERFVVGFTDEKDTFQLQKLSSSSGFYKFHPDRKLVVHSFTGSAIDLQKLLNLSP ------------------------------------------------------------ NIFIGVNGCSLRTEENLAVVKQIPTERLLLETDAPWCEIKRTHASFQYLAKYQEVRDFEY --------2---------------------------2----------------------- PAFKSVKKNKLADKLNAEELYMVKGRNEPCNMEQVAIVVSEVKDVDLATLIDTTWKTTCK ------------------------------------------------------------ IFG --- >HUMAN GROWTH HORMONE; SWP:P01241; PDB:1HGUA PTIPLSRLFQNAMLRAHRLHQLAFDTYEEFEEAYIPQKYSFLQAPQASLCFSESIPTPSN -------------------------------------------------1---------- REQAQQKSNLQLLRISLLLIQSWLEPVGFLRSVFANSLVYGASDSDVYDLLKDLEEGIQT ------------------------------------------------------------ LMGRLEDGSPRTGQAFKQTYAKFDANSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCR -----------------------------------------1----------------2- SVEGSCG -----2- >ANTIBODY FOR BETA2 ADRENOCEPTOR, LIGHT CHAIN; SWP:NA; PDB:2R4RL DIKMTQSPSSMYASLGERVTITCKASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPS ----------------------1------------------------------------- RFIGTGSGQDYSLTISSLDYADMGIYYCLQYDEFPYTFGGGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC -------------2-------------------- >2-KETO-3-DEOXY-(6-PHOSPHO-)GLUCONATE ALDOLASE; SWP:Q704D1; PDB:2R91A MEIVAPVITTFRGGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAA ------------------------------------------------------------ TSAARRVIVQVASLNADEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSA ---------------------------------------------------------1-- VSIPVFLYNYPAAVGRDVDARAAKELGCIRGVKDTNESLAHTLAYKRYLPQARVYNGSDS ---------------------------1-------------------------------- LVFASFAVRLDGVVASSANYLPELLAGIRDAVAAGDIERARSLQFLLDEIVESARHIGYA ------------------------------------------------------------ AAVYELVEIFQGYEAGEPRGPVYPLDPEEKAWLRAAVAKAKSQLRL ---------------------------------------------- >BONE MORPHOGENETIC PROTEIN 3; SWP:P12645; PDB:2QCQA EPRNCARRYLKVDFADIGWSEWIISPKSFDAYYCSGACQFPMPKSLKPSNHATIQSIVRA ----1----------------------------2---3---------------------- VGVVPGIPEPCCVPEKMSSLSILFFDENKNVVLKVYPNMTVESCACR -----------1-------------------------------2-3- >BERBERINE BRIDGE-FORMING ENZYME; SWP:P30986; PDB:3D2DA AEAGNDLLSCLTFNGVRNHTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSK ---------1-------------------------------------------------- EELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVE --------1--------------------------------------------------- SGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILI ------------------------------------------------------------ DANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEAT ------------------------------------------------------------ SLLHKWQFVAEELEEDFTLSVLGGADEKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVE ------------------------------------------------------------ EDYLEMSWGESFAYLAGLETVSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLS ------------------------------------------------------------ KEPNGFIALNGFGGQMSKISSDFTPFPHRSGTRLMVEYIVAWNQSEQKKKTEFLDWLEKV ------------------------------------------------------------ YEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNYERLIRA ------------------------------------------------------------ KTLIDPNNVFNHPQSIPPMA -------------------- >HEAVY CHAIN OF FAB 1A1D-2; SWP:NA; PDB:2R29H EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGYSKY ---------------------1-------------------------------------- DPKFQGKATITADTSSNAAYLQLSSLTSEDTAVYFCARDYEGFAYWGQGTLVTVSSAKTT -----------------------------------1------------------------ PPSVYPLAPGAAAATSSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTL ----------------------2------------------------------------- SSSVTVTSSTWPSQTITCNVAHPASSTKVDKKIEPR -----------------2------------------ >INSULIN A CHAIN; SWP:P01308; PDB:2JUVA GIEQCCTSICSLYQLENYCN ----1----1---------- >MU-CONOTOXIN GIIIA; SWP:P01523; PDB:1TCHA RDCCTKKCKDAQCKQRCCA --12---3----1---23- >FACTOR IX; SWP:P00740; PDB:1EDMB VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL -----1----2-----1--------2-3--------3-- >JINGZHAOTOXIN-3; SWP:P62520; PDB:2I1TA DGECGGFWWKCGRGKPPCCKGYACSKTWGWCAVEAP ---1------2------31----2------3----- >HUMAN MELANOMA INHIBITORY ACTIVITY PROTEIN; SWP:Q16674; PDB:1HJDA ADRKLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQG -----1----1-----------------2------------------------------- DYYGDLAARLGYFPSSIVREDQTLKPGKVDVKTDKWDFYCQ ---------------------------------------2- >CYTOCHROME C OXIDASE COPPER CHAPERONE; SWP:Q14061; PDB:2RN9A GSFTMPGLVDSNPAPPESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECM -----------------------------1---------2--------2---------1- RALGFKI ------- >AMARANTHUS CAUDATUS ANTIMICROBIAL PEPTIDE 2; SWP:NA; PDB:1ZUVA VGECVRGRCPSGMCCSQWGYCGKGPKYCGR ---1----2----31-----2------3-- >THIOREDOXIN DISULFIDE ISOMERASE; SWP:Q9Z6Y0; PDB:2JU5A ARRRASGENLQQTRPIAAANLQWESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQI -------------------------------------------------1--1------- LQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFIDAEGKQL ------------------------------------------------------------ ARMGFEPGGGAAYVSKVKSALKLR ------------------------ >BOVINE PANCREATIC TRYPSIN INHIBITOR; SWP:NA; PDB:2ZJXA RPDFCLEPPYTGPGKARIIRYFYNAKAGLAQTFVYGGARAKRNNFKSAEDALRTCGGA ----1-------------------------------------------------1--- >UDP-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE; SWP:P0ACC7; PDB:1FWYA NNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLL ------------------------------------------------------------ KQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILMLYGDVPLISVETLQRLRDAKP ------------------------------------------------------------ QGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATDEQRQIQEINTGILIANGADMKR ------------------------------------------------------------ WLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQSE ------------------------------------------------------------ QAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSV ------------------------------------------------------------ IGDDCEISPYTVVEDANLAAACTIGP ----1----------------1---- >TISSUE FACTOR PATHWAY INHIBITOR; SWP:P10646; PDB:1ADZA DYKDDDDKLKPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEEC -------------1--------2---------------3-------2------------3 KNICEDGPNGF ---1------- >GLUTATHIONE AMIDE REDUCTASE; SWP:NA; PDB:2R9ZA TQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKALGGTCVNVGCVPKKVMWYASHLAE ----------------------------------------1----1-------------- AVRDAPGFGVQASLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV ------------------------------------------------------------ EGQRLSADHIVIATGGRPIVPRLPGAELGITSDGFFALQQQPKRVAIIGAGYIGIELAGL ------------------------------------------------------------ LRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVA ------------------------------------------------------------ QDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDIT ------------------------------------------------------------ GRDQLTPVAIAAGRRLAERLFDGQSERKLDYDNIPTVVFAHPPLSKVGLSEPEARERLGD ------------------------------------------------------------ VLTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMG ------------------------------------------------------------ ATKADFDNTVAIHPGSAEELVTLKEPVRRPG ------------------------------- >PROCARBOXYPEPTIDASE B; SWP:P09955; PDB:1NSAA FEGEKVFRVNVEDENDISELHELASTRQIDFWKPDSVTQIKPHSTVDFRVKAEDILAVED -----------------------------------------------------------1 FLEQNELQYEVLINNLRSVLEAQFDSVSR ------------1---------------- >NEUROTOXIN CN11; SWP:P63019; PDB:1PE4A RDGYPLASNGCKFGCSGLGENNPTCNHVCEKKAGSDYGYCYAWTCYCEHVAEGTVLWGDS ----------1---2---------3---4----------2----3-4------------- GTGPCRS ----1-- >199aa long hypothetical Trp repressor binding protein; SWP:Q973M9; PDB:2ZKIA CKPNILVLFYGYGSIVELAKEIGKGAEEAGAEVKIRRVRETLPPEFQSRIPFDKVKDIPE 1----------------------------------------------------------- VTLDDMRWADGFAIGSPTRYGNMAGGLKTFLDTTAILWKDNVLYGKPVTFFTEASTVHGG ------------------------------------------------------------ HETTILTMSTYAYHFGMIIVPIGYGIPELFQTTTGGGPYGATHLGSKEELDEMERKIARF ------------------------------------------------------------ QGKRITEVAKAIKCCN -------------1-- >BOWMAN-BIRK TYPE TRYPSIN INHIBITOR; SWP:P01062; PDB:1SMFI CTKSIPPEC 1-------1 >RECEPTOR PROTEIN-TYROSINE KINASE ERBB-2; SWP:P04626; PDB:1N8ZC TQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQDIQEVQG ---1--------------------------1----------------------------- YVLIAHNQVRQVPLQRLRIVRGTQLFEDNYALAVLDNGDPLSPGGLRELQLRSLTEILKG ------------------------------------------------------------ GVLIQRNPQLCYQDTILWKDIFHKNNQLALTLIDTNRSRACHPCSPMCKGSRCWGESSED ----------2-----------------------------2--3---4----3------- CQSLTRTVCAGGCARCKGPLPTDCCHEQCAAGCTGPKHSDCLACLHFNHSGICELHCPAL 4-------5---6--5-------67---8---7-------8--9--------9---a--- VTYNTDTFESMPNPEGRYTFGASCVTACPYNYLSTDVGSCTLVCPLHNQEVTATQRCEKC -----------------------a---b-----------b---c------------c--d SKPCARVCYGLGMEHLREVRAVTSANIQEFAGCKKIFGSLAFLPESFDSNTAPLQPEQLQ ---d---e------------------------e--------------------------- VFETLEEITGYLYISAWPDSLPDLSVFQNLQVIRGRILHNGAYSLTLQGLGISWLGLRSL ------------------------------------------------------------ RELGSGLALIHHNTHLCFVHTVPWDQLFRNPHQALLHTANRPEDECVGEGLACHQLCARG ----------------f----------------------------f------g---h--- HCWGPGPTQCVNCSQFLRGQECVEECRVLQGLPREYVNARHCLPCHPECQPQNGSVTCFG -g-------h--i--------i---j---------------j--k---l--------k-- PEADQCVACAHYKDPPFCVARCPSIWKFPDEEGACQPCPIN -----l--m--------m---n------------n------ >NEUROLIGIN 4, X-LINKED; SWP:Q8N0W4; PDB:2VH8A DDDKLAAAQYPVVNTNYGKIRGLRTPLPNEILGPVEQYLGVPYASPPTGERRFQPPEPPS ------------------------------------------------------------ SWTGIRNTTQFAAVCPQHLDERSLLHDMLPIWFTANLDTLMTYVQDQNEDCLYLNIYVPT --------------1-----------------------------------1--------- EDDIHSKKPVMVYIHGGSYMEGTGNMIDGSILASYGNVIVITINYRLGILGFLSTGDQAA ------------------------------------------------------------ KGNYGLLDQIQALRWIEENVGAFGGDPKRVTIFGSGAGASCVSLLTLSHYSEGLFQKAII ------------------------------------------------------------ QSGTALSSWAVNYQPAKYTRILADKVGCNMLDTTDMVECLRNKNYKELIQQTITPATYHI ---------------------------2----------2--------------------- AFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGLKFVDGIVDNEDGVTPNDFDFS ------------------------------------------------------------ VSNFVDNLYGYPEGKDTLRETIKFMYTDWADKENPETRRKTLVALFTDHQWVAPAVATAD ------------------------------------------------------------ LHAQYGSPTYFYAFYHHCQSEMKPSWADSAHGDEVPYVFGIPMIGPTELFSCNFSKNDVM -----------------3---------------------------------3-------- LSAVVMTYWTNFAKTGDPNQPEEVAWSRYNPKDQLYLHIGLKPRVRDHYRATKVAFWLEL ------------------------------------------------------------ VPHL ---- >POTASSIUM CHANNEL TOXIN ALPHA-KTX 18.1; SWP:P60211; PDB:2JP6A GSTGPQTTCQAAMCEAGCKGLGKSMESCQGDTCKCKA --------1----2---3---------1----2-3-- >PROTEIN (THANATIN); SWP:P55788; PDB:8TFVA GSKKPVPIIYCNRRTGKCQRM ----------1------1--- >3H6 FAB LIGHT CHAIN; SWP:NA; PDB:3BQUC ETTVTQSPASLVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGY ---------------1-------------------------------------------- GTDFVFTSEDVADYYCLQSDNLPYTFGGGTNLRADAAPTVSIFPPSSEQLTSGGASVVCF ---------------1------------------------------------------2- LNNFYPKDINVKWKIDNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKS -----------------------------------------------------2------ PIVKSF ------ >INTERLEUKIN-23 SUBUNIT P19; SWP:Q9NPF7; PDB:3D85C PAWTQCQQLSQKLCTLAWSAHPLVDVPHIQCGDGCDPQGLRDNSQFCLQRIHQGLIFYEK ----------------------------------1-----------1------------- LLGSDIFTGEPSLLPDSPVGQLHASLLGLSQLLQPLSPSQPWQRLLLRFKILRSLQAFVA ------------------------------------------------------------ VAARVFAHGAATL ------------- >ENDOCHITINASE; SWP:P85084; PDB:3CQLA GIEKIISRSMFDQMLKHRNNPACPAKGFYTYDAFIAAAKSFPSFGTTGSTDVRKREIAAF ----------------------1------------------------------------- LGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPIQLS ------------------------1-----------2-------2--------------- WNYNYGPCGEALRVNLLGNPDLVATDRVISFKTALWFWMTPQAPKPSCHDVITGRWQPSA ------------------------------------------------------------ ADTAAGRLPGYGVITNIINGGLECGKGPNPQVADRIGFFRRYCGILGVGTGNNLDCYNQR -----------------------3-------------------------------3---- PFG --- >METALLOCARBOXYPEPTIDASE INHIBITOR; SWP:P01075; PDB:4CPAI HADPICNKPCKTHDDCSGAWFCQACWNSARTCGPYV -----1---2-----3-----1--2------3---- >CYCLOVIOLACIN O1; SWP:P82230; PDB:1DF6A SCVYIPCTVTALLGCSCSNRVCYNGIPCAE -1----2-------3-1----2-----3-- >Trans-acting T-cell-specific transcription factor GATA-3; SWP:P23772; PDB:3DFVD RRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQTRNR ---------1-----------------1---------------------------- >BOVINE PANCREATIC TRYPSIN INHIBITOR; SWP:NA; PDB:3CI7A RPAFCLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGARAKRNNFASAADALAACAAA ----1-------------------------------------------------1--- >MONOCLONAL ANTIBODY F-22-30; SWP:NA; PDB:2UYLB QVQLEQPGAELVKPGASVKLSCKASGYTFTSNWINWVKQRPGQGLEWIGHISPGSSSTNY ---------------------1-------------------------------------- NEKFKSKATLTVDTSSSTAYMQLSSLTSDDSAVYYCGREETVRASFGNWGQGTLVTVSAA -----------------------------------1------------------------ KTTPPSVYPLAPSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSV ------------------2----------------------------------------- TVPSSTWPSQTVTCNVAHPASSTKVDKKIVPRD -------------2------------------- >Sulfite reductase, dissimilatory-type subunit beta; SWP:Q59110; PDB:3C7BB EGVKTDFGPPYFRDLLHPVIAKNYGKWKYHEVVKPGVIKRVAESGDVIYVVRFGTPRLLS ------------------------------------------------------------ IYTVRELCDIADKYSDGYLRWTSRNNVEFFVTDESKIDDLINEVQERVGFPCGGTWDAVK ------------------------------------------------------------ GEYGLSNIVHTQGWIHCHTPAIDASGIVKAVMDELYEYFTDHKLPAMCRISLACCANMCG ------------------------------------------------------------ AVHASDIAIVGIHRTPPIPNDEAIRKTCEIPSTVAACPTGALKPDMKNKTIKVDVEKCMY ---------------------------1-------------------------------- CGNCYTMCPGMPLFDPENDGAAIMVGGKLSEARRMPELSKVVVPWVPNEPPRWPTLVKYV -------1---------------------------------------------------- KQILEAWAANANKHERLIEWVDRIGWERFFELTGLEFTQHLIDDYRITPYFYSEFRASTQ ------------------------------------------------------------ FKW --- >NEURAL CELL ADHESION MOLECULE 2; SWP:O15394; PDB:2VA4A SMPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTEL -------------------------1---------------------------------- TVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEG --------------1----------------------------------------2---- EPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRI -----------------------------------------------------2------ GGHQKSMYLDIE ------------ >RHOPTRY KINASE; SWP:NA; PDB:3BYVA QGPGDVVIEELFNRIPQANVRTTSEMQSAADSLVSTSLWNGQPFRVESELGERPRTLVRG ------------------------------------------------------------ TVLGQEDPYAYLEATDETGESFEVHVPYFTEPPSNAIKQMKEEVLRLRLLRGIKNQKQAK ------------------------------------------------------------ VHLRFIFPFDLVKDPQKKKMIRVMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHH ------------------------------------------------------------ ARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSR ------------------------------------------------------------ GFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPIGGSEWIFRSCKNI -----------------------------------------1--------------1--- PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLY --------------------------------------------- >ZINC METALLOPROTEINASE-DISINTEGRIN BOTHROPASIN; SWP:O93523; PDB:3DSLA QKYNPFRYVELFIVVDQGMVTKNNGDLDKIKARMYELANIVNEILRYLYMHAALVGLEIW ------------------------------------------------------------ SNGDKITVKPDVDYTLNSFAEWRKTDLLTRKKHDNAQLLTAIDFNGPTIGYAYIGSMCHP ---------------------------------------------------------1-- KRSVAIVEDYSPINLVVAVIMAHEMGHNLGIHHDTDFCSCGDYPCIMGPTISNEPSKFFS -------------------------------------2-3----3--------------- NCSYIQCWDFIMKENPQCILNEPLGTDIVSPPVCGNELLEVGEECDCGTPENCQNECCDA -2---------------1---------------4----------5-6-----6---75-- ATCKLKSGSQCGHGDCCEQCKFSKSGTECRASMSECDPAEHCTGQSSECPADVFHKNGQP --4-------8----98--7--------a------b-----9------a----------- CLDNYGYCYNGNCPIMYHQCYALFGADVYEAEDSCFKDNQKGNYYGYCRKENGKKIPCAP c------b----c------d--------------e------------f---------f-- EDVKCGRLYCKDNSPGQNNPCKMFYSNDDEHKGMVLPGTKCADGKVCSNGHCVDVA ----g----d----------e-------------------h-----g----h---- >BETA-1,3-GLUCANASE; SWP:NA; PDB:2JONA ATPTPTPKAAGSWCVPKPGVSDDQLTGNINYACSQGIDCGPIQPGGACFEPNTVKAHAAY -------------1------------------2-----2--------3------------ VMNLYYQHAGRNSWNCDFSQTATLTNTNPSYGACNFPSGSN ---------------1-----------------3------- >TUMOR NECROSIS FACTOR; SWP:P01375; PDB:2E7AA PSDMPVAHVVANPQAEGQLQWLNRRANALLANGVELRDNQLVVPSEGLYLIYSQVLFSGQ ------------------------------------------------------------ GCPSTHVLLTHTISRISTTHNQPVNLLSAIRSPCQRETPEGAEANPWYEPIYLGGVFQLE -1-------------------------------1-------------------------- PGDRLSAEINRPDYLDFAESGQVYFGIIAL ------------------------------ >GLUCOAMYLASE; SWP:NA; PDB:2VN4A SVDDFISTETPIALNNLLCNVGPDGCRAFGTSAGAVIASPSTIDPDYYYMWTRDSALVFK ------------------1------1---------------------------------- NLIDRFTETYDAGLQRRIEQYITAQVTLQGLSNPSGSLADGSGLGEPKFELTLKPFTGNW ------------------------------------------------------------ GRPQRDGPALRAIALIGYSKWLINNNYQSTVSNVIWPIVRNDLNYVAQYWNQTGFDLWEE ------------------------------------------------------------ VNGSSFFTVANQHRALVEGATLAATLGQSGSAYSSVAPQVLCFLQRFWVSSGGYVDSNIN -----------------------------------------2------------------ TNEGRTGKDVNSVLTSIHTFDPNLGCDAGTFQPCSDKALSNLKVVVDSFRSIYGVNKGIP -------------------------3-------3-------------------------- AGAAVAIGRYAEDVYYNGNPWYLATFAAAEQLYDAIYVWKKTGSITVTATSLAFFQELVP ------------------------------------------------------------ GVTAGTYSSSSSTFTNIINAVSTYADGFLSEAAKYVPADGSLAEQFDRNSGTPLSALHLT ------------------------------------------------------------ WSYASFLTATARRAGIVPPSWANSSASTIPSTCSGASVVGSYSRPTATSFPPSQTPKPGV --------------------------------2--------------------------- PSGTPYTPLPCATPTSVAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVNYAD ----------4------------------------------------------------- NHPLWIATVNLEAGDVVEYKYINVGQDGSVTWESDPNHTYTVPAVACVTQVVKEDTWQS ----------------------------------------------4------------ >INVASION-ASSOCIATED PROTEIN B; SWP:Q6G4Y3; PDB:3DTDA SLTETYGLWSINCGIQKVCFMHRQEVNDQNRVVVAMSVVLNADGVVSGNLTVPFGILVSK ------------1-----1----------------------------------------- PVRLQVDEGKAVIETGIRTCVPAGCIVPIVFDKNYVAALRAGKHLKLAMTIAAPGEPPLN -------------------2----2----------------------------------- DLFVQLNGFSNALNRLIALQKE ---------------------- >INFLUENZA B HEMAGGLUTININ (HA); SWP:Q84097; PDB:2RFTA DRICTGITSSNSPHVVKTATQGEVNVTGVIPLTTTPTKSHFANLKGTQTRGKLCPNCLNC -----------------------------------------------------1--1--2 TDLDVALGRPKCMGTIPSAKASILHEVKPVTSGCFPIMHDRTKIRQLPNLLRGYENIRLS -----------2---------------------3-------------------------- ARNVTNAETAPGGPYIVGTSGSCPNVTNGNGFFATMAWAVPKNKTATNPLTVEVPYICTK ----------------------3----------------------------------4-- GEDQITVWGFHSDDETQMVKLYGDSKPQKFTSSANGVTTHYVSQIGGFPNQAEDEGLPQS ------------------------------------------------------------ GRIVVDYMVQKPGKTGTIAYQRGVLLPQKVWCASGRSKVIKGSLPLIGEADCLHEKYGGL -------------------------------4-------------------5-------- NKSKPYYTGEHAKAIGNCPIWVKTPLKLANGTKYRPPAKLLK -----------------5------------------------ >CYANOVIRIN-N HOMOLOG; SWP:NA; PDB:2JZJA MQCNFANSCTGVELYGYILRGDCINEDGHPHATSINLNYYIGNDNGRLEYPGESFGSSCV --1-----2-------------2-----------------------------------3- KTALNDGHTLTASCKGADGQYHDSSMDLNYVVGNSYGYMEPCRASNADHVLKSSSE -------------3---------------------------1-------------- >HETEROPODATOXIN 2; SWP:P58426; PDB:1EMXA DDCGKLFSGCDTNADCCEGYVCRLWCKLDW --1------2-----31----2---3---- >OMEGA-CONOTOXIN GVIA; SWP:P01522; PDB:1OMCA CKSGSSCSTSYNCCRSCNYTKRCY 1-----2-----31--2-----3- >RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE EPSILON; SWP:P23469; PDB:2JJDA YFPIPVEHLEEEIRIRSREEFNSLPSGHIQGTFELANKEENREKNRYPNILPNDHSRVIL ------------------------------------------------------------ SQLGIPCSDYINASYIDGYKEKNKFIAAQGPKQETVNDFWRMVWEQKSATIVMLTNLKER ------------------------------------------------------------ KEEKCHQYWPDQGCWTYGNIRVCVEDCVVLVDYTIRKFCIQPKAPRLVSQLHFTSWPDFG -------------1--------1------------------------------------- VPFTPIGMLKFLKKVKTLNPVHAGPIVVHCSAGVGRTGTFIVIDAMMAMMHAEQKVDVFE ------------------------------------------------------------ FVSRIRNQRPQMVQTDMQYTFIYQALLEYYLYGDTELDVSSGLEEEFRKLTNVRIMKENM ------------------------------------------------------------ RTGNLPANMKKARVIQIIPYDFNRVILSMYTDYINASFIDGYRQKDYFIATQGPLAHTVE ------------------------------------------------------------ DFWRMIWEWKSHTIVMLTEVQEREQDKCYQYWPTEGSVTHGEITIEIKNDTLSEAISIRD ------------------------------------------------------------ FLVTLNGEQVRVVRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSAGA ------------------------------------------------------------ GRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDFID --------------------------------------------------------- >HUWENTOXIN-II; SWP:P82959; PDB:1I25A LFECSFSCEIEKEGDKPCKKKKCKGGWKCKFNMCVKV ---1---2---------1----3-----2----3--- >HYPOTHETICAL PROTEIN TT1886; SWP:NA; PDB:1WFRA GSSGSSGMELFTEAWAQAYCRKLNESEAYRKAASTWEGSLALAVRPDPKAGFPKGVAVVL -------------------1---------------------------------------- DLWHGACRGAKAVEGEAEADFVIEADLATWQEVLEGRLEPLSALMRGLLELKKGTIAALA ------1----------------------------------------------------- PYAQAAQELVKVAREVASGPSSG ----------------------- >Repeat Five Residue (Rfr) protein or pentapeptide repeat protein; SWP:NA; PDB:2O6WA ATNNLYRLELERECVGCNLEGVNLPRENFGLKYRIPSPLVTTPFGDKAKPVDLTRANLSN -------------1--1------------------------------------------- ANLYQSDLSSIILENAILVETNLSETDLENAILIGANLQGANLENANLQGANLENANLRG ------------------------------------------------------------ AILTGVNLEETHLKGIETDKNTVWD ------------------------- >METABOTROPIC GLUTAMATE RECEPTOR 7; SWP:P35400; PDB:2E4ZA PHSIRIEGDVTLGGLFPVHAKGPSGVPCGDIKRENGIHRLEAMLYALDQINSDPNLLPNV ---------------------------1-------------------------------- TLGARILDTCSRDTYALEQSLTFVQALIQKPEKVVGVIGASGSSVSIMVANILRLFQIPQ ---------1-------------------------------------------------- ISYASTAPELSDDRRYDFFSRVVPPDSFQAQAMVDIVKALGWNYVSTLASEGSYGEKGVE ------------------------------------------------------------ SFTQISKEAGGLCIAQSVRIPTIDFDRIIKQLLDTPNSRAVVIFANDEDIKQILAAAKRA ------------------------------------------------------------ DQVGHFLWVGSDSWGSKINPLHQHEDIAEGAITIQPKRATVEGFDAYFTSRTLENNRRNV ------------------------------------------------------------ WFAEYWEENFNCKKCTGQERIGKDSNYEQEGKVQFVIDAVYAMAHALHHMNKDLCYRGVC -----------2--2---------------------------------------3----3 PEMEQAGGKKLLKYIRHVNFNGSAGTPVMFNKNGDAPGRYDIFQYQTTNTTNPGYRLIGQ ------------------------------------------------------------ WTDELQLNIEDMQW -------------- >TITYUSTOXIN ALPHA-KTX; SWP:P83243; PDB:1JLZA ACGSCRKKCKGSGKCINGRCKCY -1--2---3-----1----2-3- >INSECT DEFENSIN A; SWP:P10891; PDB:1ICAA ATCDLLSGTGINHSACAAHCLLRGNRGGYCNGKGVCVCRN --1------------2---3---------1-----2-3-- >UNCHARACTERIZED PROTEIN CA_C3497; SWP:Q97DI0; PDB:3D0JA AKPDIYENNREGILCVYKNEKWLVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAIL --------------1---------1----------------------------------- ITAEKENDKFNIELTLEKGKVYNVPAECWFYSITQKDTKYVQDSNCSDNSDFCDLSKEEI ------------------------------------------------------------ EYIQTNARKLFEK ------------- >SEPTIN-7; SWP:Q16181; PDB:2QAGC ANLPNQVYRKSVKGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSTVQVEQSKVL ------------------------------------------------------------ QLLLTIVDTPWQPVIDYIDSKFEDYLNAESRNRRQMPDNVQCCLYFIAPGHGLKPLDIEF ------------------------------------------------------------ MKRLHEKVNIIPLIAKADTLTPEECQQFKKQIMKEIQEHKIKIYEFPLPLAVVGGRQYPW ------------------------1----------------------------------- GVAEVGEHCDFTILRNMLIRTHMQDLKDVTNNVHYENYRSRKLA --------1----------------------------------- >PFEMP1 VARIANT 2 OF STRAIN MC; SWP:Q25734; PDB:3C64A DKIMSYNAFFWMWVHDMLIDSIKWRDEHGCNKKCICFQKWVEQKKTEWGKIKDHFRKQKD ---------------------------------1-------------------------- IPKDWTHDDFLQTLLMKDLLLEIIQDTYGDANEIKRIEALLEQAGVGGIDFAALAGLYTK ------------------------------------------------------------ GFVAEKDTTIDKLLQHEQKEADKCLKTHTDDT -----------------------1-------- >DIR1 PROTEIN; SWP:Q8W453; PDB:2RKNA AIDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPE ----1---------2---------------23---------1-4---------------- LASALPKQCGLANAPTC --------3-------4 >DIHYDROLIPOYL DEHYDROGENASE; SWP:P90597; PDB:2QAEA NPYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYH ----------------------------------------1----1-------------- DAHANFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETA ------------------------------------------------------------ HSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVPKTMVVI ------------------------------------------------------------ GGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVV ------------------------------------------------------------ GGTNNGDSVSLEVEGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFE ------------------------------------------------------------ TSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAGKPGHVNYGVIPAVIYTMPEVASVG ------------------------------------------------------------ KSEDELKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGEL ------------------------------------------------------------ IGEACLAMEYGASSEDVGRTCHAHPTMSEALKEACMALFAKTINF --------------------------------------------- >PROTEIN A41; SWP:P24766; PDB:2VGAA CDSDNKEYMGIEVYVEATLDEPLRQTTCESKIHKYGASVSNGGLNISVDLLNCFLNFHTV 1--------------------------2------------------------3------- GVYTNRDTVYAKFASLDPWTTEPINSMTHDDLVKLTEECIVDIYLKCEVDKTKDFMKTNG --------------------------------------3-------4------------- NRLKPRDFKTVPPSNVGSMIELQSDYCVNDVTTYVKIYDECGNIKQHSIPTLRDYFTTKN --------------------------4-------------1------------------- GQPRKILKKKFDNC -------------2 >PANCREATIC LIPASE-RELATED PROTEIN 1; SWP:P54315; PDB:2PPLA MKEVCYEDLGCFSDTEPWGGTAIRPLKILPWSPEKIGTRFLLYTNENPNNFQILLLSDPS ----1-----1------------------------------------------------- TIEASNFQMDRKTRFIIHGFIDKGDESWVTDMCKKLFEVEEVNCICVDWKKGSQATYTQA --------------------------------2----------2---------------- ANNVRVVGAQVAQMLDILLTEYSYPPSKVHLIGHSLGAHVAGEAGSKTPGLSRITGLDPV ------------------------------------------------------------ EASFESTPEEVRLDPSDADFVDVIHTDAAPLIPFLGFGTNQQMGHLDFFPNGGESMPGCK ----------------------------------------------------------3- KNALSQIVDLDGIWAGTRDFVACNHLRSYKYYLESILNPDGFAAYPCTSYKSFESDKCFP ----------------------3-----------------------4----------4-- CPDQGCPQMGHYADKFAGREQQKFFLNTGEASNFARWRYGVSITLSGRTATGQIKVALFG 5----5------------------------------------------------------ NKGNTHQYSIFRGILKPGSTHSYEFDAKLDVGTIDKVKFLWNNNVINPTLPKVGATKITV ------------------------------------------------------------ QKGEEKTVYNFCSEDTVREDTLLTLTPCP -----------6---------------6- >KALIOTOXIN; SWP:P24662; PDB:1KTXA GVEINVKCSGSPQCLKPCKDAGMRFGKCMNRKCHCTP -------1-----2---3---------1----2-3-- >TCR B3K506 BETA CHAIN; SWP:NA; PDB:3C5ZB AVTQSPRSKVAVTGGKVTLSCHQTNNHDYMYWYRQDTGHGLRLIHYSYVADSTEKGDIPD --------------------1--------------------------------------- GYKASRPSQENFSLILELASLSQTAVYFCASIDSSGNTLYFGEGSRLIVVEDLKNVFPPE ----------------------------1------------------------------- VAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALN --------------------2--------------------------------------- DSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD -------------------------2---------------------------------- >PSI-CONOTOXIN PIIIF; SWP:P60245; PDB:1JLPA GCCLYGSCRFGCYNALCCRK -12----3---1----23-- >ENDOTHELIN-1; SWP:P05305; PDB:1EDNA CSCSSLMDKECVYFCHLDIIW 1-2-------2---1------ >JAGGED-1; SWP:P78504; PDB:2VJ2A CDDYYYGFGCNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPECNRAICRQGCSPKHGSCK 1--------1---2-----------2-------3--------3----4---5------4- LPGDCRCQYGWQGLYCDKCIPHPGCVHGICNEPWQCLCETNWGGQLCDKDLNYCGTHQPC ----5-6--------6--7-----8----7-----8-9--------9------a-----b LNGGTCSNTGPDKYQCSCPEGYSGPNCEI -----a---------b-c--------c-- >NKG2-A/NKG2-B TYPE II INTEGRAL MEMBRANE PROTEIN; SWP:P26715; PDB:3BDWB ARHCGHCPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLSIISPS ------1----------1----------------2------------------------- SWIGVFRNSSHHPWVTMNGLAFKHEIKAELNCAVLQVNRLKSAQCGSSIIYHCKHK -------------------------------3------------3-------2--- >DOMAIN III OF ENVELOPE PROTEIN E; SWP:P18356; PDB:2JSFA MDKLQLKGMSYSMCTGKFKVVKEIAETQHGTIVIRVQYEGDGSPCKIPFEIMDLEKRHVL -------------1------------------------------1--------------- GRLITVNPIVTEKDSPVNIEAEPPFGDSYIIIGVEPGQLKLNWFKKGSSLEHHHHHH --------------------------------------------------------- >THIOREDOXIN GLUTATHIONE REDUCTASE; SWP:Q962Y6; PDB:2V6OA SQWLRKTVDSAAVILFSKTTCPYCKKVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFS ------------------------------------------------------------ KIETVPQMFVRGKFIGDSQTVLKYYSNDELAGIVNESKYDYDLIVIGGGSGGLAAGKEAA ------------------------------------------------------------ KYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSLDR --------------------------1----1---------------------------- SKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVST ------------------------------------------------------------ ITGNKIILATGERPKYPEIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLAS ------------------------------------------------------------ LGGDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGL ------------------------------------------------------------ LLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSN ------------------------------------------------------------ VYAIGDINAGKPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGACGLSEE ------------------------------------------------------------ DAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEI ------------------------------------------------------------ TQGYAVAIKMGATKADFDRTIGIHPTCSETFTTLHVTKKSGVSPIV ---------------------------------------------- >ANTI-CIGUATOXIN ANTIBODY 10C9 FAB LIGHT CHAIN; SWP:NA; PDB:2Z91B ELVMTQTPAIMSASPGEKVTMTCSASSSVSSVHWYQQKSGTSPKRWIYDTSKLPSGVPGR ----------------------1------------------------------------- FSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPPTFGAGTKLEVKRADAAPTVSIFPPS --------------------------1--------------------------------- SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTL ------------2----------------------------------------------- TKDEYERHNSYTCEATHKTSTSPIVKSFNRN ------------2------------------ >PROGRAMMED CELL DEATH 1 LIGAND 2; SWP:Q9WUL5; PDB:3BOVA LFTVTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQ ----------------------1------2------------------------------ LPLGKALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASY ----------------------1---2----------------- >MTx-HsTx1; SWP:P80719; PDB:1WPDA VSCTGSKDCYAPCRKQTGCPYGKCMNRKCKCNRC --1-----2---3-----4----1----2-3--4 >VENOM ALLERGEN 3; SWP:P35778; PDB:2VZNA NYCNLQSCKRNNAIHTMCQYTSPTPGPMCLEYSNVGFTDAEKDAIVNKHNELRQRVASGK --1--------------1----------2------------------------------- EMRGTNGPQPPAVKMPNLTWDPELATIAQRWANQCTFEHDACRNVERFAVGQNIAATSSS ----------------------------------2------------------------- GNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFK -----------------------------------------------------3------ EPDNWTKHYLVCNYGPAGNVLGAPIYEIKKHHHHHH -----------3------------------------ >DNA-DIRECTED RNA POLYMERASE SUBUNIT N; SWP:Q980Z8; PDB:2PMZN MLIPIRCFTCGSLIADKWQSFITRVNAGENPGKVLDDLGVKRYCCRRMLLSHVDIINEVI ---------1----------------------------------1--------------- HYTR ---- >EAFP 2; SWP:P83597; PDB:1P9GA TCASRCPRPCNAGLCCSIYGYCGSGAAYCGAGNCRCQCRG -1---2---3----41-----3------4----5-2-5-- >FIMH PROTEIN; SWP:P08191; PDB:1KIUB FACKTANGTAIPIGGGSANVYVNLAPVVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQR --1----------------------------------------1---------------- GSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAI ------------------------------------------------------------ KAGSLIAVLILRNTNNYNSDDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVP ----------------------------------------2------------------- IPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTASFSPAQGVGVQLTRNGTIIPANNTVSL ------2----------------------------------------------------- GAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ --------------------------------------- >VIRAL INTERLEUKIN-10; SWP:P03180; PDB:1VLKA CDNFPQMLRDLRDAFSRVKTFFQTKDEVDNLLLKESLLEDFKGYLGCQALSEMIQFYLEE 1---------------------------------------------2------------- VMPQAENQDPEAKDHVNSLGENLKTLRLRLRRCHRFLPCENKSKAVEQIKNAFNKLQEKG --------------------------------1-----2--------------------- IYKAMSEFDIFINYIEAYMTIK ---------------------- >CALCIUM-BINDING PROTEIN; SWP:O42720; PDB:2JV7A DQPSVGDAFDKYNEAVRVFTQLSSAANCDWAACLSSLSASSAACIAAVGELGLDVPLDLA ---------------------------1----2----------3---------------- CAATATSSATEACKGCLW 3-----------2--1-- >167AA LONG HYPOTHETICAL DUTPASE; SWP:Q970G0; PDB:2YZJA ILSHQSIKNLLGKVILNYSEENVRENGYDLRICGDKYYELVQGAELPEKKATLREIEFKE --------------------------------1--------------------------- RAILSANHTYLFESCEEFNPADLAVLITLKSTLARNGFLAPPTVIDAGYKGKVNVAITAV --------------1--------------------------------------------- YNSSLKKGATHHLIFLKLDKPTERLYNGKYQGGILI ------------------------------------ >INTERLEUKIN-19; SWP:Q9UHD0; PDB:1N1FA NHGLRRCLISTDMHHIEESFQEIKRAIQAKDTFPNVTILSTLETLQIIKPLDVCCVTKNL ------1----------------------------------------------23----- LAFYVDRVFKDHQEPNPKILRKISSIANSFLYMQKTLRQCQQCHCRQEATNATRVIHDNY ---------------------------------------1--2-3--------------- DQLEVHAAAIKSLGELDVFLAWINKNHEVMSSA --------------------------------- >ENVELOPE GLYCOPROTEIN; SWP:Q3I0Y8; PDB:2HG0A FNCLGMSNRDFLEGVSGATWVDLVLEGDSCVTIMSKDKPTIDVKMMNMEAANLAEVRSYC --1--------------------------1-----------------------------2 YLATVSDLSTKAACPTMGEAHNDKRADPAFVCRQGVVDRGWGNGCGLFGKGSIDTCAKFA -------------3-----------------4------------3----------4---- CSTKAIGRTILKENIKYEVAIFVHGPTTVESHGNYSTQVGATQAGRFSITPAAPSYTLKL 2----------------------------------------------------------- GEYGEVTVDCEPRSGIDTNAYYVMTVGTKTFLVHREWFMDLNLPWSSAGSTVWRNRETLM ---------5-------------------------------------------------- EFEEPHATKQSVIALGSQEGALHQALAGAIPVEFSSNTVKLTSGHLKCRVKMEKLQLKGT -----------------------------------------------5------------ TYGVCSKAFKFLGTPADTGHGTVVLELQYTGTDGPCKVPISSVASLNDLTPVGRLVTVNP ----6------------------------------6------------------------ FVSVATANAKVLIELEPPFGDSYIVVGRGEQQINHHWHKS ---------------------------------------- >JUNCTIONAL ADHESION MOLECULE A; SWP:Q9Y624; PDB:3EOYG SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRV ----------------------1------------------------------------- TFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVL ---------------------1-------------------- >FAB OF ANTIBODY 7G10, LIGHT CHAIN; SWP:Q9NPF7; PDB:3D85A DIVMTQSPATLSVTPGDRVSLSCRASQSISDYLHWYRQKSHESPRLLIKYASQSISGIPS ----------------------1------------------------------------- RFSGSGSGSDFTLSINSVEPEDVGVYYCQNGHSFPFTFGSGTKLEIKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE -------------2------------------- >PHOSPHOLIPASE A2; SWP:P45881; PDB:2OQDA DLWQFGQMILKETGKLPFPYYTTYGCYCGWGGQGQPKDATDRCCFVHDCCYGKLTNCKPK -------------------------1-2--------------32----45------6--- TDRYSYSRENGVIICGEGTPCEKQICECDKAAAVCFRENLRTYKKRYMAYPDVLCKKPAE --------------7-----6----7-5------3-------------------1----- KC -4 >LACTOFERRIN; SWP:O77698; PDB:1BIYA APRKNVRWCTISQPEWLKCHRWQWRMKKLGAPSITCVRRAFVLECIRAITEKKADAVTLD --------1---------2----------------2--------1--------------- GGMVFEAGLDPYKLRPVAAEIYGTKESPQTHYYAVAVVKKGSNFQLDQLQGRNSCHTGLG ------------------------------------------------------3----- RSAGWNIPMGILRPYLSWTESLEPLQGAVAKFFSASCVPCVDRQAYPNLCQLCKGEGENQ ------------------------------------4--5---------6--4------- CACSPREPYFGYSGAFKCLQDGAGDVAFVKETTVFENLPEKADRDQYELLCLNNTRAPVD 6-5--------------3--------------------------------7--------- AFKECHLAQVPSHAVVARSVDGKEDLIWKLLSKAQEKFGKNKSGSFQLFGSPPGQRDLLF ----7------------------------------------------------------- KDSALGFLRIPSKVDSALYLGSRYLTALKNLRETAEEVQARRARVVWCAVGPEEQKKCQQ -----------------------------------------------8---------9-- WSQQSGQIVTCATASTTDDCIALVLKGEADALSLDGGYIYTAGKCGLVPVLAENRKSSKH ----------9--------8------------------------a--------------- SSLDCVLRPTEGYLAVAVVKKANEGLTWNSLKGKKSCHTAVDRTAGWNIPMGLIANQTGS ----b-------------------------------c----------------------- CAFDEFFSQSCAPGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDV d---------e----------f--e---------f----------------c-------- AFVKNDTVWENTNGESTADWAKNLNREDFRLLCLDGTRKPVTEAQSCHLAVAPNHAVVSL --------------------------------g-------------g------------- SERAAHVEQVLLHQQALFGENGKNCPDKFCLFKSETKNLLFNDNTECLAKLGGRPTYEEY ------------------------h----h----------------b------------- LGTEYVTAIANLKKCSTSPLLEACAFLTR --------------d--------a----- >PROTEIN (GROWTH FACTOR IGF-1); SWP:P01343; PDB:1B9GA GPETLCGAELVDALQFVCGDRGFYFNKPGIVDECCFRSCDLRRLEMYCAPLKPAKSA -----1-----------2---------------31---3--------2--------- >SAV_2001; SWP:Q82LK9; PDB:3DEXA HTHRVQIEYCTQCRWLPRAAWLAQELLTTFETELTELALKPGTGGVFVVRVDDEVVWDRR ---------1--1----------------------------------------------- EQGFPEPTAVKRLVRDRVA ------------------- >Oligosaccharyl transferase stt3 subunit related protein; SWP:Q8U4D2; PDB:2ZAGA ETSGWEDALKWLRENTPEYSTATSWWDYGYWIESSLLGQRRASADGGHARDRDHILALFL ------------------------------------------------------------ ARDGNISEVDFESWELNYFLVYLNDWAKFNAISYLGGAITRREYNGDESGRGAVTTLLPL ------------------------------------------------------------ PRYGEKYVNLYAKVIVDVSNSSVKVTVGDRECDPLVTFTPSGKTIKGTGTCSDGNAFPYV -------------------------------1------------------1--------- LHLTPTIGVLAYYKVATANFIKLAFGVPASTIPGFSDKLFSNFEPVYESGNVIVYRFTPF ------------------------------------------------------------ GIYKIEENINGTWKQVYNLTPGKHELKLYISAFGRDIENATLYIYAINNEKIIEKIKIAE ------------------------------------------------------------ ISHDYLNEYPIAVNVTLPNATSYRFVLVQKGPIGVLLDAPKVNGEIRSPTNILREGESGE ------------------------------------------------------------ IELKVGVDKDYTADLYLRATFIYLVRKSGKDNEDYDAAFEPQDVFFITKIGENIQLKEGE ------------------------------------------------------------ NTVKVRAELPEGVISSYKDELQRKYGDKLIIRGIRVEPVFIAEKEYLLEVSASA ------------------------------------------------------ >SIALIC ACID-BINDING IG-LIKE LECTIN 5; SWP:O15389; PDB:2ZG1A VYELQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPD ----------------1----2-------------------------------------- RRVKPETQGRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEV ---------------------2-------------------------------------- TALIEKPDIHEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPETTRSSELTLT ----------------------3-----1------------------------------- PRPEDHGTNLTCQMKRQTTERTVQLNVS -----------3---------------- >SUBTILISIN BPN'; SWP:P00782; PDB:3BGOP EKKYIVGFKQGFKSCAKKEDVISEKGGKLQKCFKYVDAASATLNEKAVEELKKDPSVAYV --------------1----------------1---------------------------- EEDKLYRALSA ----------- >KINESIN LIGHT CHAIN 2; SWP:Q9H0B6; PDB:3CEQA LVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIR ------------------------------------------------------------ EKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNL ------------------------------------------------------------ ALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYK ------------------------------------------------------------ EILTRAHEKEFGSVNGDNKPIWMHAEEREESKACKSPTVNTTLRSLGALYRRQGKLEAAH ---------------------------------1-------------------------- TLEDCASRNR ----1----- >POLLEN ALLERGEN OLE E 6; SWP:O24172; PDB:1SS3A DEAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKLENYKPKN -------1-------2---------2-------1---------------- >Advanced glycosylation end product-specific receptor; SWP:Q15109; PDB:2ENSA GSSGSSGLEEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPSPVLI -------------------------------1---------------------------- LPEIGPQDQGTYSCVATHSSHGPQESRAVSISIIEP -------------1---------------------- >PROTEIN SPAETZLE; SWP:P48607; PDB:3E07A DERFLCRSIRKLVYPKKDEYKQAIQIEECEGADQPCDFAANFPQSYNPICKQHYTQQTLA -----1----------------------2------3-------------1---------- SIKSDGELDVVQNSFKIPSCCKCALKTGLE --------------------2-3------- >Extracellular giant hemoglobin major globin subunit B1; SWP:Q5KSB7; PDB:2ZFOD ECCSRGDAEVVISEWDQVFNAAMAGSSESAIGVAIFDVFFTSSGVSPSMFPGGGDSSSAE --1--------------------------------------------------------- FLAQVSRVISGADIAINSLTNRATCDSLLSHLNAQHKAISGVTGAAVTHLSEAISSVVAQ ------------------------------------------------------------ VLPSAHIDAWGYCMAYIAAGIGAGL ------------1------------ >PROTEIN (INMUNOGLOBULINE); SWP:NA; PDB:1QGC4 DIVLTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLES ----------------------1------------------------------------- GIPDRFSGSGSRTDFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVS -------------------------------1---------------------------- IFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMS -----------------2------------------------------------------ STLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEEVMLVESGGGLVKPGGSLKLSCT -----------------2----------------------------------------3- ASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQM ------------------------------------------------------------ SSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMV ------------3----------------------------------------------- TLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCN ---4------------------------------------------------------4- VAHPASSTKVDKKIVPR ----------------- >MINI-COLLAGEN; SWP:Q00484; PDB:1ZPXA PCGSYCPSVCAPACAPVCCYP -1---2---3---1---32-- >FAB 83-14 HEAVY CHAIN; SWP:NA; PDB:2DTGC QVQLQQSGPELVKPGALVKISCKASGYTFTNYDIHWVKQRPGQGLEWIGWIYPGDGSTKY ---------------------1-------------------------------------- NEKFKGKATLTADKSSSTAYMHLSSLTSEKSAVYFCAREWAYWGQGTLVTVSAAKTTAPS -----------------------------------1------------------------ VYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSS -------------------2---------------------------------------- VTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC --------------2-------------------- >OMEGA-ATRACOTOXIN-HV2A; SWP:P82852; PDB:1G9PA LLACLFGNGRCSSNRDCCELTPVCKRGSCVSSGPGLVGGILGGIL ---1------2-----31-----2----3---------------- >SUBGROUP A ROUS SARCOMA VIRUS RECEPTOR PG800 AND PG950; SWP:P98162; PDB:1K7BA SCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCG -1------2---------1------3-----2--------3- >POTASSIUM CHANNEL TOXIN SHK; SWP:P29187; PDB:1BEIA RSCIDTIPKSRCTAFQCKHSMYRLSFCRKTCGTC --1--------2----3---------2---3--1 >Kalata-B7; SWP:P58457; PDB:2JWMA CGETCTLGTCYTQGCTCSWPICKRNGLPV 1---2----3----1-2----3------- >FACTOR VII; SWP:P08709; PDB:1BF9A SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHK -----1----2-----1--------2-3--------3---- >Fusion protein of Maltose-binding periplasmic protein and Parathyroid hormone/parathyroid hormone-related peptide receptor; SWP:Q03431; PDB:3C4MA RTAVINAASGRQTVDEALKDAQTNAAAEFDDVMTKEEQIFLLHRAQAQCEKRLKEVRPCL -------------------------------------------------1---------2 PEWDHILCWPLGAPGEVVAVPCPDYIYDFNHKGHAYRRCDRNGSWELVPGHNRTWANYSE --------3-------------4----------------5-------------------- CVKFL -6--- >VARIANT SURFACE GLYCOPROTEIN ILTAT 1.24; SWP:P26329; PDB:2JWHA GTKASKSGVPVTQTQTAGADTTAEKCKGKGEKDCKSPDCKWEGGTCKD -------------------------1-------2----1------2-- >lebetin 2 isoform alpha; SWP:Q7LZ09; PDB:1Q01A GDNKPPKKGPPNGCFGHKIDRIGSHSGLGCNKVDDNKG -------------1---------------1-------- >PROTEIN (FRACTALKINE); SWP:P78423; PDB:1B2TA MQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGKRAIILETRQHRLFCADPKEQWVK --------1---2---------------------1---------------2--------- DAMQHLDRQAAALTRNG ----------------- >ALPHA-CONOTOXIN MII; SWP:P56636; PDB:2AJWA GCCSNPVCHLEHSNLCGGAAGG -12----1-------2------ >PUTATIVE BLASTICIDIN S DEAMINASE; SWP:Q81Y61; PDB:3B8FA NIEQQLYDVVKQLIEQRYPNDWGGAAAIRVEDGTIYTSVAPDVINASTELCMETGAILEA --------------------------------------------------1--------- HKFQKKVTHSICLARENEHSELKVLSPCGVCQERLFYWGPEVQCAITNAKQDIIFKPLKE ------------------------------1----------------------------- LQPYHWTEAYHDEMVKEWSTR --------------------- >PROTEINASE A; SWP:P01094; PDB:1DP5A GGHDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHE ---------------------------------------------1----1--------- ASSSYKANGTEFAIQYGTGSLEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDG ------------------------------------------------------------ ILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDT ------------------------------------------- >EUKARYOTIC TRANSLATION INITIATION FACTOR 5A-1; SWP:P63241; PDB:3CPFA SATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTHAKVHLVGIDIFTGKKYEDICPSTHN -------1----------------------------------------------1----- MDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLGKEIEQKYDCGEEILITVL ------------------------------------------------------------ SAMTEEAAVAIK ------------ >Saratin; SWP:NA; PDB:2K13X EEREDCWTFYANRKYTDFDKSFKKSSDLDECKKTCFKTEYCYIVFEDTVNKECYYNVVDG -----1------------------------2---3-----3-----------2------- EELDQEKFVVDENFTENYLTDCEGKDAGNAAGTGDESDEVDED ---------------------1--------------------- >PROTEIN G; SWP:P22261; PDB:1BRVA VPCSTCEGNLACLSLCHIE --1--2-----2---1--- >INTESTINAL TREFOIL FACTOR; SWP:Q07654; PDB:1E9TA EEYVGLSANQCAVPAKDRVDCGYPHVTPKECNNRGCCFDSRIPGVPWCFKPLQEAECTF ----------1---------2---------3----21----------3----------- >LIPOPROTEIN RECEPTOR RELATED PROTEIN; SWP:Q07954; PDB:1D2LA GSPPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPALCHQH -----1------2----1------3-----2----------3--- >HUMAN IGG1 FAB FRAGMENT HEAVY CHAIN; SWP:NA; PDB:3DVGB EVQLVESGGGLVQPGGSLRLSCAASGFNVKTGLIHWVRQAPGKGLEWVAYITPYYGSTSY ---------------------1-------------------------------------- ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAREYYRWYTAIDYWGQGTLVTVSS -----------------------------------1------------------------ ASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSS --------------------------2--------------------------------- GLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK ----------------------2------------------ >GROWTH-BLOCKING PEPTIDE; SWP:NA; PDB:2DJ9A ENFAGGCLTGFMRTPDGRCKPTF ------1-----------1---- >PROCATHEPSIN L; SWP:P07711; PDB:1CJLA DHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFG -----------------1------------------------------------------ DMTSEEFRQVMNGLQNRKPRKGKVFQEPLFYE 1------------------------------- >YJEQ PROTEIN; SWP:A4PIH2; PDB:2YV5A MGKKELKRGLVVDREAQMIGVYLFEDGKTYRGIPRGKVLKKTKIYAGDYVWGEVVDPNTF ------------------------------------------------------------ AIEEVEERKNLLIRPKVANVDRVIIVETLKMPEFNNYLLDNMLVVYEYFKVEPVIVFNKI ------------------------------------------------------------ DLLNEEEKKELERWISIYRDAGYDVLKVSAKTGEGIDELVDYLEGFICILAGPSGVGKSS ------------------------------------------------------------ ILSRLTGEELRTQEVTTTGVRLIPFGKGSFVGDTPGFSKVEATMFVKPREVRNYFREFLR ------------------------------------------------------------ YQCKYPDCTHTNEPGCAVKEAVKNGEISCERYKSYLKIIKVYLEEIKELCRED ----------------------------1--------------------1--- >NA; SWP:Q96RJ3; PDB:1OQEK PTPCVPAECFDLLVRHCVACGLLRTPRPKPA ---1----2-------1--2----------- >LYSOZYME C-2; SWP:Q06283; PDB:2Z2FA KVFERCELARTLKKLGLDGYKGVSLANWLCLTKWESSYNTKATNYNPSSESTDYGIFQIN -----1-----------------------2------------------------------ SKWWCNDGKTPNAVDGCHVSCSELMENDIAKAVACAKHIVSEQGITAWVAWKSHCRDHDV ----3-----------4---3-------------4-------------------2----- SSYVEGCTL ------1-- >TCR YAE62 BETA CHAIN; SWP:NA; PDB:3C60B AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPD --------------------1--------------------------------------- GYKASRPSQENFSLILELATPSQTSVYFCASGDFWGDTLYFGAGTRLSVLEDLKNVFPPE ----------------------------1------------------------------- VAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALN --------------------2--------------------------------------- DSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAW -------------------------2------------------------------ >INTERFERON-GAMMA RECEPTOR ALPHA CHAIN; SWP:P15260; PDB:1FG9C VPTPTNVTIESYNMNPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACINISHHYCNIS ------------------------------------------------1-------1--- DHVGDPSNSLWVRVKARVGQKESAYAKSEEFAVCRDGKIGPPKLDIRKEEKQIMIDIFHP ---------------------------------2-------------------------- SVFVNGDEQEDPETTCYIRVYNVYVRMNGSEIQYKILTQKEDDCDEIQCQLAIPVSSLNS ---------------2---------------------------3----3----------- QYCVSAEGVLHVWGVTTEKSKEVCITIFNS --4--------------------4------ >SEVERIN; SWP:P10733; PDB:1SVQA EYKPRLLHISGDKNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSPQEKNKAAEV -------------------------------1---------------------------- ARAIDAERKGLPKVEVFCETDSDIPAEFWKLLGG -----------------1---------------- >PROTEIN (LACTOFERRIN); SWP:P02788; PDB:1B0LA GRRRSVQWCTVSQPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCIQAIAENRADAVTLD --------1---------2----------------2--------1--------------- GGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQLNELQGLKSCHTGLR ------------------------------------------------------3----- RTAGWNVPIGTLRPFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGTGENK ------------------------------------4------------5--4------- CAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVFEDLSDEAERDEYELLCPDNTRKPVD 5----------------3--------------------------------6--------- KFKDCHLARVPSHAVVARSVNGKEDAIWNLLRQAQEKFGKDKSPKFQLFGSPSGQKDLLF ----6------------------------------------------------------- KDSAIGFSRVPPRIDSGLYLGSGYFTAIQNLRKSEEEVAARRARVVWCAVGEQELRKCNQ -----------------------------------------------7---------8-- WSGLSEGSVTCSSASTTEDCIALVLKGEADAMSLDGGYVYTAGKCGLVPVLAENYKSQQS ----------8--------7------------------------9--------------- SDPDPNCVDRPVEGYLAVAVVRRSDTSLTWNSVKGKKSCHTAVDRTAGWNIPMGLLFNQT ------a-------------------------------b--------------------- GSCKFDEYFSQSCAPGSDPRSNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAG --c---------d----------e--d---------e----------------b------ DVAFVKDVTVLQNTDGNNNEAWAKDLKLADFALLCLDGKRKPVTEARSCHLAMAPNHAVV ----------------------------------f-------------f----------- SRMDKVERLKQVLLHQQAKFGRNGSDCPDKFCLFQSETKNLLFNDNTECLARLHGKTTYE --------------------------g----g----------------a----------- KYLGPQYVAGITNLKKCSTSPLLEACEFLRK ----------------c--------9----- >BOMBYXIN-II,BOMBYXIN A-2; SWP:P15411; PDB:1BOMA GIVDECCLRPCSVDVLLSYC -----1----1--------- >DISULFIDE BOND PROTEIN A; SWP:Q9EYL5; PDB:3BCIA GKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHA ------------1--1-------------------------------------------- VLMYAPKSFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSK ------------------------------------------------------------ SWKAAEKDKKIAKDNHIKTTPTAFINGEKVEDPYDYESYEKLLKD --------------------------------------------- >Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; SWP:Q5SLR0; PDB:2EQ6A MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLH ----------------------------------------1----1-------------- HLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEV ------------------------------------------------------------ EVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEE ------------------------------------------- >COAGULATION FACTOR VII LIGHT CHAIN; SWP:P08709; PDB:3ELAL DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTG --1----2-----1--------2-3--------3---------4------5---4----- TKRSCRCHEGYSLLADGVSCTPTVEYPCGKIPILE ----5-6------------6--------------- >BOOPHILIN; SWP:Q8WPI2; PDB:2ODYE QRNGFCRLPADEGICKALIPRFYFNTETGKCTMFSYGGCGGNENNFETIEECQKACGAPE -----1--------2---------------3-------2------------3---1---- RVNDFESADFKTGCEPAADSGSCAGQLERWFYNVQSGECETFVYGGCGGNDNNYESEEEC -------------4--------5---------------6-------5------------6 ELVCKNM ---4--- >CONSERVED HYPOTHETICAL PROTEIN; SWP:Q9X1V5; PDB:1P8CA RRELNEKVLSRGTLNTKRFFNLDSAVYRPGKLDVKTKELMGLVASTVLRCDDCIRYHLVR -------------------------------------------------1--1------- CVQEGASDEEIFEALDIALVVGGSIVIPHLRRAVGFLEELREMEKNGETIS --------------------------------------------------- >SUBGROUP A ROUS SARCOMA VIRUS RECEPTORS PG800 AND PG950; SWP:P98162; PDB:1JRFA GSSRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCGTS ----1------2---------1------3-----2--------3--- >ENVELOPE PROTEIN E; SWP:Q6J3P1; PDB:2JQMA MSALTLKGTSYKMCTDKMSFVKNPTDTGHGTVVMQVKVPKGAPCKIPVIVADDLTAAINK -------------1-----------------------------1---------------- GILVTVNPIASTNDDEVLIEVNPPFGDSYIIVGTGDSRLTYQWHKEGSSIGK ---------------------------------------------------- >GLUTAREDOXIN-2, MITOCHONDRIAL; SWP:P17695; PDB:3D4MA MVSQETVAHVKDLIGQKEVFVAAKTYCPYCKATLSTLFQELNVPKSKALVLELDEMSNGS --------------------------1--1------------------------------ EIQDALEEISGQKTVPNVYINGKHIGGNSDLETLKKNGKLAEILKPVFQ ------------------------------------------------- >METALLOPROTEINASE-2 INHIBITOR; SWP:P16035; PDB:1BR9A CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPEKDI 1-2---------3----------------------------------------------- EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSTTQKKSLNH -----------1----------------------------2------------------- RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKRSDGSCAWYRG -----3-4----5----5-------6--------------------6-------4----- AA -- >Advanced glycosylation end product-specific receptor; SWP:Q15109; PDB:2E5EA AMAQNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLP -----------------1------------------------------------------ NGSLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQIP ------------------1---------------------- >RELAXIN RECEPTOR 1; SWP:Q9HBX9; PDB:2JM4A GSQDVKCSLGYFPCGNITKCLPQLLHCNGVDDCGNQADEDNCG ------1------2-----1------3-----2--------3- >ADAMTS-5; SWP:Q9UNA0; PDB:2RJQA SRARQVELLLVADASMARLYGRGLQHYLLTLASIANRLYSHASIENHIRLAVVKVVVLGD ------------------------------------------------------------ KDKSLEVSKNAATTLKNFCKWQHQHNQLGDDHEEHYDAAILFTREDLCGHHSCDTLGMAD ------------------1----------------------------2----2------- VGTICSPERSCAVIEDDGLHAAFTVAHEIGHLLGLSHDDSKFCEETFGSTEDKRLMSSIL ----3-----1-------------------------------4----------------- TSIDASKPWSKCTSATITEFLDDGHGNCLLDLPRKQILGPEELPGQTYDATQQCNLTFGP -----------4---------------3-------------------------5------ EYSVCPGMDVCARLWCAVVRQGQMVCLTKKLPAVEGTPCGKGRICLQGKCVD ----6-----7----5---------6------------8-----7----8-- >INTIMIN; SWP:P19809; PDB:1E5UI TLTIDDGNIEIVGTGVKGKLPTVWLQYGQVNLKASGGNGKYTWRSANPAIASVDASSGQV ------------------------------------------------------------ TLKEKGTTTISVISSDNQTATYTIATPNSLIVPNMSKRVTYNDAVNTCKNFGGKLPSSQN -----------------------------------------------1------------ ELENVFKAWGAANKYEYYKSSQTIISWVQQTAQDAKSGVASTYDLVKQNPLNNIKASESN ------------------------------------------------------------ AYATCVK ----1-- >(NEO)PULLULANASE; SWP:Q5SI17; PDB:2Z1KA AWYEGAFFYQIFPDRFFRAGPPGRPAPAGPFEPWEAPPTLRGFKGGTLWGVAEKLPYLLD ------------------------------------------------------------ LGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFNH ------------------------------------------------------------ TGRGFFAFQHLENGEQSPYRDWYHVKGFPLKAYTAHPNYEAWWGNPELPKLKVETPAVRE ------------------------------------------------------------ YLLAVAEHWIRFGVDGWRLDVPNEIPDPTFWREFRQRVKGANPEAYIVGEIWEEADFWLQ ------------------------------------------------------------ GDFDAVNYPLARAVLGFVGGEALDRDLAAQTGLGRIEPLQALAFSHRLEDLFGRYRPEVV ------------------------------------------------------------ RAQNLLTSHDTPRLLSLRGSVERARLALALLFLLPGNPTVYYGEEVGAGGKDPENRGGVW ------------------------------------------------------------ EEARWQKDLRETVKRLARLRKEHPALRTAPYLRIYAQDGHLAFARGPYLAVVNASPHPFR ------------------------------------------------------------ QDFPLHGVFPRGGRAVDLLSGEVCTPQGGRLCGPVLPPFSLALWREA -----------------------1-------1--------------- >Mitochondrial import inner membrane translocase subunit TIM13; SWP:P53299; PDB:3CJHA ATELVNKISENCFEKCLTSPYATRNDACIDQCLAKYMRSWNVISKAYISRIQ -----------1---2-----------2---1-------------------- >Putative ABC transporter amino acid-binding protein; SWP:Q92WC8; PDB:2Q88A RDENKLEELKEQGFARIAIANEPPFTAVGADGKVSGAAPDVAREIFKRLGVADVVASISE ------------------------------------------------------------ YGAMIPGLQAGRHDAITAGLFMKPERCAAVAYSQPILCDAEAFALKKGNPLGLKSYKDIA --------------------------1----------2---------------------- DNPDAKIGAPGGGTEEKLALEAGVPRDRVIVVPDGQSGLKMLQDGRIDVYSLPVLSINDL ------------------------------------------------------------ VSKANDPNVEVLAPVEGAPVYCDGAAFRKGDEALRDAFDVELAKLKESGEFAKIIEPYGF ---------------------2-------------------------------------- SAKAAMSTTREKLCAAK -------------1--- >ANTILEUKOPROTEINASE; SWP:P03973; PDB:2Z7FI RRKPGKCPVTYGQCLMLNPPNFCEMDGQCKRDLKCCMGMCGKSCVSPVKA ------1------2--------3-----4-----31---2---4------ >METALLOPROTEINASE INHIBITOR 3; SWP:P35625; PDB:3CKIB CTCSPSHPQDAFCNSDIVIRAKVVGKKLVKEGPFGTLVYTIKQMKMYRGFTKMPHVQYIH 1-2---------3----------------------------------------------- TEASESLCGLKLEVNKYQYLLTGRVYDGKMYTGLCNFVERWDQLTLSQRKGLNYRYHLGC -------1--------------------------2------------------------3 N - >RECEPTOR ACTIVITY-MODIFYING PROTEIN 1; SWP:O60894; PDB:2YX8A CQEANYGALLRELCLTQFQVDEAVGETLWCDWGRTIRSYRELADCTWHAEKLGCFWPNAE 1------------2---------------3--------------2--------1------ VDRFFLAVHGRYFRSCPIS ---------------3--- >PROTEIN (INSULIN PRECURSOR); SWP:P01308; PDB:1IOGA GIGEQCCTSICSLYQLENYCN -----1----1---------- >RANASMURFIN; SWP:NA; PDB:2VH3A AACSFPPSEIPGSKECLAEALQKHQGFKKKSYALICAYLNYKEDAENYERAAEDFDSAVK --1------------2-------------------3------------------------ CTGCKEGVDLHEGNPELIEEGFEKFLASLKIDRKALGSLCTLFQKLAIPH 1--2-----------------------------------3---------- >CHITINASE A; SWP:Q9AMP1; PDB:3B8SA APTAPSIDMYGSNNLQFSKIELAMETTSGYNDMVKYHELAKIKVKFNQWSGTSGDTYNVY ------------------------------------------------------------ FDGVKVATGAITGSQTTASFEYGQGGLYQMEIEACDATGCSKSAPVEITIADTDGSHLKP ----------------------------------1----1-------------------- LTMNVDPNNKSYNTDPSIVMGTYFVEWGIYGRDYTVDNMPVDNLTHILYGFIPICGPNES ------------------------------------------------------2----- VKSVGGNSFNALQTACRGVNDYEVVIHDPWAAYQKSFPQAGHEYSTPIKGNYAMLMALKQ ---------------2-------------------------------------------- RNPDLKIIPSIGGWTLSDPFYDFVDKKNRDTFVASVKKFLKTWKFYDGVDIDWEFPGGGG ------------------------------------------------------------ AAADKGDPVNDGPAYIALMRELRVMLDELEAETGRTYELTSAIGVGYDKIEDVDYADAVQ ------------------------------------------------------------ YMDYIFAMTYDFYGGWNNVPGHQTALYCGSFMRPGQCDGGGVDENGEPYKGPAYTADNGI ---------------------------3--------3----------------------- QLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKLKGSTAQGVWEDGV ------------------------------------------------------------ IDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGELITFDDHRSVLAKGNYAKS ------------------------------------------------------------ LGLAGLFSWEIDADNGDILNAMHEGMA --------------------------- >I-SUPERFAMILY CONOTOXIN R11A; SWP:Q7Z094; PDB:2JRYA GSFCKADEKCEYHADCCNCCLSGICASTNWILPGCSTSSFKI ---1-----2-----31-42----3---------4------- >HEPCIDIN; SWP:P81172; PDB:1M4EA ICIFCCGCCHRSKCGMCCKT -1--23-44----3--21-- >DNAB-LIKE REPLICATIVE HELICASE; SWP:Q38152; PDB:3BGWA NEYAEQAVLGSILTEPELIKECPLTPEHFSPGKHFNIYFTMQDLDRKGQSVDFTSIAARV ---------------------1-------------------------------------- GEKLPQLGGFGYLTELAASVASTTTFKQHCQTVSEYFQKRKAISIAQQIIENVNVKPIQE -----------------------------1------------------------------ AVSELMEIEASGTDDDDGSIDEALVTVYEEIESADGNITGVPSGFTELDRMTYGYKRRNF ------------------------------------------------------------ VLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKENIKRLIVTAGSINAQKIKAA ------------------------------------------------------------ RRDFASEDWGKLSMAIGEISNSNINIFDKAGQSVNYIWSKTRQTKRKNPGKRVIVMIDYL ------------------------------------------------------------ QLLEPAKANDSRTNQISQISRDLKKMARELDVVVIALSQLSRQVEQRQDKRPMLSDLRES ------------------------------------------------------------ GQLEQDADIIEFLYRDDYYDKESESKNIVEVIIAKHRDGPVGTVSLAFIKEYGNFVNLE ----------------------------------------------------------- >TRANSCRIPTION REGULATOR PROTEIN BACH1; SWP:P97302; PDB:2Z8HA HMSVSESAVFAYESSVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYF ------------------------------------------------------------ HSRIVGQTDAELTVTLPEEVTVKGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIE -----------------------------------------------1------------ ESCFQFLKFKFLDSTS --1------------- >CHINITASE A; SWP:Q9KY99; PDB:3EBVA SLKHAVTGYWQNFNNGATVQKISDVPSAYDIIAVAFADATTTPGAVTFNLDSAGLGGYTV ------------------------------------------------------------ DQFKADVRAKQAAGKKVIISVGGEKGTVSVNSSASATNFANSVYSVREYGFDGVDIDLEN ------------------------------------------------------------ GLNPTYTQALRALSAKAGPDILTAPQTIDQSTQGGYFQTALNVKDILTVVNQYYNSGTLG ------------------------------------------------------------ CDGKVYAQGTVDFLTALACIQLEGGLAPSQVGLGLPASTRAAGGGYVSPSVVNAALDCLT 1-----------------1--------------------------------------2-- KATNCGSFKPSKTYPDLRGATWSTNWDATAGNAWSNSVGAHVHAL ----2---------------------------------------- >THIOREDOXIN REDUCTASE; SWP:Q9RSY7; PDB:2Q7VA TAPTAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEP ------------------------------------------------------------ IAGMELAQRMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGA ------------------------------------------------------------ DPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVI --------------------1--1------------------------------------ HRRDTLRANKVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGV ------------------------------------------------------------ FIFIGHVPNTAFVKDTVSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIYRQLATSVGAGT ------------------------------------------------------------ RAAMMTERQLAAL ------------- >cycloviolacin O1; SWP:P82230; PDB:1NBJA CAESCVYIPCTVTALLGCSCSNRVCYNGIP 1---2----3-------1-2----3----- >THIOREDOXIN-3; SWP:NA; PDB:2OE0A SYTSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDV --------------------------------1--1------------------------ DESPDIAKECEVTAMPTFVLGKDGQLIGKIIGANPTALEKGIKDL --------------------------------------------- >PUTATIVE THIOREDOXIN; SWP:Q8I2Z1; PDB:3CXGA SGRENLYFQGQSIYIELKNTGSLNQVFSSQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY ------------------------------------------1--1-------------- YVTLVDIDVDIHPKLNDQHNIKALPTFEFYFNLNNEWVLVHTVEGANQNDIEKAFQKYCL ------------------------------------------------------------ EK -- >NEUROTOXIN III; SWP:P01535; PDB:1ANSA RSCCPCYWGGCPWGQNCYPEGCSGPKV --12-3----2-----1----3----- >BETA-GALACTOSIDASE; SWP:Q8A799; PDB:3BGAA LPEWQSQYAVGLNKLAPHTYVWPYADASDIGKPGGYEQSPYYSLNGKWKFNWVKNPDNRP ------------------------------------------------------------ KDFYQPSYYTGGWADINVPGNWERQGYGTAIYVNETYEFDDKFNFKKNPPLVPFAENEVG ------------------------------------------------------------ SYRRTFKVPADWKGRRVVLCCEGVISFYYVWVNGKLLGYNQGSKTAAEWDITDVLSEGEN ------------------------------------------------------------ VVALEVYRWSSGAYLECQDWRLSGIERDVYLYSTPKQYIADYKVSASLDKEKYKEGIFNL ------------------------------------------------------------ EVTVEGPSATASSIAYTLKDASGKAVLQDAINIKSRGLSNFIAFDEKKIAEVKAWNAEHP ------------------------------------------------------------ NLYTLVLELKDAQGKVTELTGCEVGFRTSEIKDGRFCINGVPVLVKGTNRHEHSQLGRTV ------------------------------------------------------------ SKELEQDIRLKQHNINVRNSHYPTHPYWYQLCDRYGLYIDEANIESHGGYGPASLAKDST ------------------------------------------------------------ WLTAHDRTHRYERSKNHPAIVIWSQGNEAGNGINFERTYDWLKSVEKGRPVQYERAELNY ------------------------------------------------------------ NTDIYCRYRSVDEIKAYVGKKDIYRPFILCEYLHAGNSCGGKEYWEVFENEPAQGGCIWD -----1-----------------------1------------------------------ WVDQNFREIDKDGKWYWTYGGDYGPEGIPSFGNFCGNGLVNAVREPHPHLLEVKKIYQNI ------------------------------------------------------------ KATLSDRKNLKVCIKNWYDFSNLNEYILRWNVKGEDGTVLAEGTKEVDCEPHATVDVTLG ------------------------------------------------------------ AVKLPNTVREAYLNLSWSRKEATPLVDTDWEVAYDQFVLAGNKNTTAYRPQKAGETAFVV ------------------------------------------------------------ DKNTGALSSLTLDGKELLAAPITLSLFRPATDNDNRDRNGARLWRKAGLNNLTQKVVSLK ------------------------------------------------------------ EEKTSATVRAEILNGKGQKVGADFVYALDKNGALKVRTTFQPDTAIVKSARLGLTFRADA ------------------------------------------------------------ YNQVSYLGRGDHETYIDRNQSGRIGLYDTTVERFHYYATPQSTANRTDVRWAKLTDQAGE ------------------------------------------------------------ GVFESNRPFQFSIIPFSDVLLEKAHHINELERDGITIHLDAEQAGVGTATCGPGVLPQYL ------------------------------------------------------------ VPVKKQSFEFTLYPVKEGHHHHH ----------------------- >FABOX117 HEAVY CHAIN FRAGMENT; SWP:NA; PDB:3DIFB EVKLQQSGPELVKPGASVKISCKASGYSFTSYYIHWVKQRPGQGLEWIGWVFPGSGNTKY ---------------------1-------------------------------------- NEKFKGKATLTADTSSSTAYMQLSSLTSEDSAVYFCARGNYDRAWFAYWGQGTLVTVSAA -----------------------------------1------------------------ KTTPPSVYPLAPSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSV ------------------2----------------------------------------- TVPSSTWPSETVTCNVAHPASSTKVDKKIVP -------------2----------------- >PUTATIVE UNCHARACTERIZED PROTEIN ST0493; SWP:Q975B5; PDB:2RBGA YKNILTLISVNNDNFENYFRKIFLDVRSSGSKKTTINVFTEIQYQELVTLIREALLENID ------------------------------------------------------------ IGYELFLWKKNEVDIFLKNLEKSEVDGLLVYCDDENKVFSKIVDNLPTAIKRNLIKDFCR -------------------------------1--------------------------1- KLS --- >BONE MORPHOGENETIC PROTEIN 6; SWP:P22004; PDB:2R53A KRLKACRKHELYVSFQDLGWQDWIIAPKGYAANYCDGECSFPLNAHMNATNHAIVQTLVH -----1----------------------------2---3--------------------- LMNPEYVPKPCCAPTKLNAISVLYFDDNSNVILKKYRNMVVRACGCH -----------1-------------------------------2-3- >PROTEIN GIANT-LENS; SWP:Q00805; PDB:3C9AA DRDVRILYQVGDSEEDLPVCAPNAVCSKIDLYETPWIERQCRCPDGRTCPSSLGVEDGHT -------------------1-----2--------------1-3-----2----------- IADKTRHYKMCQPVHKLPVCKHFRDYTWTLTTAAELNVTEQIVHCRCPRNSVTYLTKREP ----------3--------4------------------------4-5------------- IGNDSPGYRYLFACSPLTRLRCQRKQPCKLFTVRKRQEFLDEVNINSLCQCPKGHRCPSH -------------5-------6-----7--------------------6-8-----7--- HTQSGVIAGESFLEDNIQTYSGYCMAND -----------------------8---- >PROTEIN DISULFIDE-ISOMERASE MPD1; SWP:Q12404; PDB:3ED3A HNFYDSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQ -------------------------------------1--1------------------- VAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPKISAHANEVYSGARTLAPIVDFSLSRIR -----2--------2--------------------------------------------- SYVKKFVRIDTLGSLLRKSPKLSVVLFSKQDKISPVYKSIALDWLGKFDFYSISNKKLKQ ------------------------------------------------------------ LTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGNSINKNDISKFL ------------------------------------------------------------ RDTFSITPNEGPFSRRSEYIAYLKTGK --------------------------- >THROMBOMODULIN; SWP:P07204; PDB:1FGEA CEAPEGYILDDGFICTDIDE 1-------------1----- >LETHAL(3)MALIGNANT BRAIN TUMOR-LIKE 2 PROTEIN; SWP:Q969R5; PDB:3CEYA QDALVLGFDWGKFLKDHSYKAAPVSCFKHVPLYDQWEDVMKGMKVEVLNSDRVYWIASVI ------------------------------------------------------------ QTAGYRVLLRYEGFENDASHDFWCNLGTVDVHPIGWCAINSKILVPPRTIHAKFTDWKGY ------------------------------------------------------------ LMKRLVGSRTLPVDFHIKMVESMKYPFRQGMRLEVVDKSQVSRTRMAVVDTVIGGRLRLL ------------------------------------------------------------ YEDDDDFWCHMWSPLIHPVGWSRRVGHGIKMCDAVPYLFKKVRAVYTEGGWFEEGMKLEA ------------------------------------------------------------ IDPLNLGNICVATVCKVLLDGYLMICVDDWFCYHASSHAIFPATFCQKNDIELTPPKTFN --------------1----------1---------------------------------- WENYLEKTKSKAAPSRLFNHGFKVGMKLEAVDLMEPRLICVATVKRVVHRLLSIHFDGWD ------------------------------------------------------------ SEYDQWVDCESPDIYPVGWCELTGYQLQPP ------------------------------ >KALATA B1; SWP:P56254; PDB:1NB1A CGETCVGGTCNTPGCTCSWPVCTRNGLPV 1---2----3----1-2----3------- >serotransferrin; SWP:P19134; PDB:1JNFA EKTVRWCAVNDHEASKCANFRDSMKKVLPEDGPRIICVKKASYLDCIKAIAAHEADAVTL ------1---------2-------------------2--------1-------------- DAGLVHEAGLTPNNLKPVVAEFYGSKENPKTFYYAVALVKKGSNFQLNELQGKKSCHTGL -------------------------------------------------------3---- GRSAGWNIPIGLLLCDLPEPRKPLEKAVASFFSGSCVPCADGADFPQLCQLCPGCGCSSV --------------4--------------------5--6---------7--5--7-6--- QPYFGYSGAFKCLKDGLGDVAFVKQETIFENLPSKDERDQYELLCLDNTRKPVDEYEQCH -----------3--------------------------------8-------------8- LARVPSHAVVARSVDGKEDLIWELLNQAQEHFGKDKSGDFQLFSSPHGKNLLFKDSAYGF ------------------------------------------------------------ FKVPPRMDANLYLGYEYVTAVRNLREGICPDPLQDECKAVKWCALGHHERLKCDEWSVTS ----------------------------4-------9-----a---------b------- GGLIECESAETPEDCIAKIMNGEADAMSLDGGYVYIAGQCGLVPVLAENYESTDCKKAPE -----b--------a------------------------c--------------d----- EGYLSVAVVKKSNPDINWNNLEGKKSCHTAVDRTAGWNIPMGLLYNRINHCRFDEFFRQG --------------------------e-----------------------f--------- CAPGSQKNSSLCELCVGPSVCAPNNREGYYGYTGAFRCLVEKGDVAFVKSQTVLQNTGGR g----------h--g-----h----------------e---------------------- NSEPWAKDLKEEDFELLCLDGTRKPVSEAHNCHLAKAPNHAVVSRKDKAACVKQKLLDLQ -----------------i-------------i------------------9--------- VEFGNTVADCSSKFCMFHSKTKDLLFRDDTKCLVDLRGKNTYEKYLGADYIKAVSNLRKC ---------j----j----------------d---------------------------f STSRLLEACTFHKH --------c----- >NEMATOCYST OUTER WALL ANTIGEN; SWP:Q8IT70; PDB:2NX7A AQNPCSLQQPGCSSACAPACRLSCCSLG ----1------2---3---1---32--- >SPASMODIC PROTEIN TX9A-LIKE PROTEIN; SWP:Q9GU57; PDB:1IXTA SCNNSCQSHSDCASHCICTFRGCGAVN -1---2-----3---1-2----3---- >ISOLEUCYL-TRNA SYNTHETASE; SWP:P56690; PDB:1ILEA MFKEVGEPNFPKLEEEVLAFWKREKIFQKSVENRKGGPRYTVYEGPPTANGLPHVGHAQA ------------------------------------------------------------ RSYKDLFPRYKTMRGYYAPRRAGWDTHGLPVELEVEKKLGLKSKREIEAYGIERFNQACR ------------------------------------------------------------ ESVFTYEKEWEAFTERIAYWVDLEDAYATLEPTYIESIWWSLKNLFDRGLLYRDHKVVPY ------------------------------------------------------------ CPRCGTPLSSHEVALGYKEIQDPSVYVRFPLKEPKKLGLEKASLLIWTTTPWTLPGNVAA 1--1-------------------------------------------------------- AVHPEYTYAAFQVGDEALILEEGLGRKLLGEGTQVLKTFPGKALEGLPYTPPYPQALEKG ------------------------------------------------------------ YFVVLADYVSQEDGTGIVHQAPAFGAEDLETARVYGLPLLKTVDEEGKLLVEPFKGLYFR ------------------------------------------------------------ EANRAILRDLRGRGLLFKEESYLHSYPHCWRCSTPLMYYATESWFIKNTLFKDELIRNNQ ----------------------------2--2---------------------------- EIHWVPPHIKEGRYGEWLKNLVDWALSRNRYWGTPLPIWVCQACGKEEAIGSFQELKARA ----------------------------------------3--3---------------- TKPLPEPFDPHRPYVDQVELACACGGTMRRVPYVIDVWYDSGAMPFASLHYPFEHEEVFR ---------------------4-4------------------------------------ ESFPADFIAEGIDQTRGWFNSLHQLGVMLFGSIAFKNVICHGLILDEKGQKMSKSKGNVV ------------------------------------------------------------ DPWDIIRKFGADALRWYIYVSAPPEADRRFGPNLVRETVRDYFLTLWNVYSFFVTYANLD ------------------------------------------------------------ RPDLKNPPPPEKRPEMDRWLLARMQDLIQRVTEALEAYDPTTSARALRDFVVEDLSQWYV ------------------------------------------------------------ RRNRRRFWKNEDALDREAAYATLYEALVLVATLAAPFTPFLAEVLWQNLVRSVRLEAKES ------------------------------------------------------------ VHLADWPEADPALADEALVAQMRAVLKVVDLARAARAKSGV ----------------------------------------- >3H6 Fab heavy chain; SWP:NA; PDB:3BQUD GVQLQQSGPELVKPGASVKMSCKASGYSFTDYFMHWVKQSHGKSLDWIGYINCYTGATNY ---------------------1-------------------------------------- SQKFKGKATFTVDTSSNTAYMQFNSLTSEDSAVYYCARTSIGYGSSPPFPYWGQGTLVTV -----------------------------------1------------------------ SAAKTTPPSVYPLAPGSSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYT -----------------------2------------------------------------ LSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPR ------------------2------------------ >OMEGA-CONOTOXIN GVIA; SWP:P01522; PDB:1TR6A CKSGSSCSKTSYNCCRSCNYTKRCY 1-----2------31--2-----3- >TRICYCLIC PEPTIDE RP 71955; SWP:P37046; PDB:1RPBA CLGIGSCNDFAGCGYAVVCFW 1-----2-----1-----2-- >PROSTASIN; SWP:Q16651; PDB:3DFJA ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQ -------------------------1---------------1------------------ LDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAANASFPN ------------------------------------------------------------ GLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNALYNIDAKPEEPHFVQEDMVCA ---2--------------------------------3---------------------3- GYVEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGDACGARNRPGVYTLASSYASWIQSK ---------4---------2-----------------4---------------------- VTELQLVP -------- >ERYTHROCYTE BINDING ANTIGEN 175; SWP:Q9NG63; PDB:2RJIA DDSTTKELIKKLAEINKCENEISAKYCDHMIHEEIPLKTCTKEKTRNLCCAVSDYCMSYF -----------------1--------2------------3--------21-----4---- TYDSEEYYDCTKREFDDPSYTCFR ---------4-----------3-- >16TH COMPLEMENT CONTROL PROTEIN; SWP:P08603; PDB:1HCCA EGLPCKSPPEISHGVVAHMSDSYQYGEEVTYKCFEGFGIDGPAIAKCLGEKWSHPPSCI ----1---------------------------2-------------1----------2- >KALLIKREIN; SWP:P00752; PDB:1HIAA IIGGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCKNDNYEVWLGRHNLFENE -------------------------1---------------1------------------ NTAQFFGVTADFPHPGFNLS -------------------- >AA-CONOTOXIN PIVA; SWP:P55963; PDB:1P1PA GCCGSYPNAACHPCSCKDRSYCGQ -12-------2--3-1-----3-- >CRUZAIN; SWP:P25779; PDB:1AIMA APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTD ---------------------1-------------------------------------- SGCSGGLMNNAFEWIVQENN --1----------------- >PROACTIVATOR POLYPEPTIDE; SWP:P07602; PDB:2R0RA GFCEVCEKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVAEYEPVLIEIL --1--2---------------------------3----------3--------------- VEVMDPSFVCLKIGACP ---------2-----1- >INACTIVATION-NO-AFTER-POTENTIAL D PROTEIN; SWP:Q24008; PDB:2QKTA LEKFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEG --------------------------1--------------------------------- LPFQVCYALFKGANGKVSMEVTRPK -----1------------------- >ANTI-LYSOZYME ANTIBODY FV REGION; SWP:NA; PDB:2EIZA EIVMTQSPATLSVSPGERATLSCRASQSIGNNLHWYQQKPGQAPRLLIYYASQSISGIPA ----------------------1------------------------------------- RFSGSGSGTEFTLTISSLQSEDFAVYYCQQSNSWPYTFGGGTKVEIK ---------------------------1------------------- >DUMPY; SWP:Q8IQ18; PDB:1OIGA RPECVLNSDCPSNQACVNQKCRDP ---1-----2-----1----2--- >TRICHOSURIN; SWP:Q29147; PDB:2R73A WEQLSRHWHTVVLASSDRSLIEEEGPFRNFIQNITVESGNLNGFFLTRKNGQCIPLYLTA ----------------------------------------------------1------- FKTEEARQFKLNYYGTNDVYYESSKPNEYAKFIFYNYHDGKVNVVANLFGRTPNLSNEIK ------------------------------------------------------------ KRFEEDFMNRGFRRENILDISEVDHC -------------------------1 >PROTEIN (PLASMATOCYTE-SPREADING PEPTIDE); SWP:O61704; PDB:1B1VA ENFNGGCLAGYMRTADGRCKPTF ------1-----------1---- >TRYPTASE INHIBITOR; SWP:P80424; PDB:1AN1I KVCACPKILKPVCGSDGRTYANSCIARCNGVSIKSEGSCP --1-2-------3----------2---1----------3- >GRANULIN-5; SWP:P28799; PDB:2JYTA VPCDNVSSCPSSDTCCQLTSGEWGCCPIPEAVCCSDHQHCCPQGYTCVAEGQCQK --1-----2-----1---------2--------3------4-----3-----4-- >DISINTEGRIN ECHISTATIN; SWP:P17347; PDB:1RO3A ECESGPCCRNCKFLKEGTICKRARGDDMDDYCNGKTCDCPRNPHKGPAT -1----23--1--------4-----------2----3-4---------- >TRANSCRIPTION ANTITERMINATION PROTEIN NUSG; SWP:O67757; PDB:1M1GA LEKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAQGKEKYRLSL ------------------------------------------------------------ KGNARDISVLGKKGVTTFRIENGEVKVVESVEGDTCVNAPPISKPGQKITCKENKTEAKI -----------------------------------1--------------1--------- VLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGGKPVPLKEEEVQNILNQIKRGV ------------------------------------------------------------ KPSKVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI ------------------------------------------------------------ >MUCOSAL ALPHA-DEFENSIN; SWP:NA; PDB:2K1IA RRTCHCRSRCLRRESNSGSCNINGRIFSLCCR ---1-2---3---------2---------31- >BETA-NERVE GROWTH FACTOR; SWP:P01138; PDB:1SG1A EFSVCDSVSVWVGDKTTATDIKGKEVMVLGEVNINNSVFKQYFFETKCRDGCRGIDSKHW ----1------------------------------------------2---3-------- NSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRK ---1---------------------------2-3----- >INSULIN-LIKE 3; SWP:P51460; PDB:2H8BA AAATNPARYCCLSGCTQQDLLTLCPY ---------1----1----------- >DNA REPAIR PROTEIN RHP9; SWP:P87074; PDB:2VXBA LIFDDCVFAFSGPVHEDAYDRSALETVVQDHGGLVLDTGLRPLFNDPFKKLRHLKPQKRS ------------------------------------------------------------ KSWNQAFVVSDTFSRKVKYLEALAFNIPCVHPQFIKQCLKMNRVVDFSPYLLASGYSHRL ------------------------------------------------------------ DCTLSQRIEPFDTTDSLYDRLLARKGPLFGKKILFIIPEQGQKALAHVYHALALGADVEI ------------------------------------------------------------ RPNVAHLECDLILTMDGNIVDETNCPVVDPEWIVECLISQSDIST --------1---------------1-------------------- >GLUTAMATE [NMDA] RECEPTOR SUBUNIT 3B; SWP:Q8VHN2; PDB:2RCAA RPKLRVVTLVEHPFVFTRESDEDGQCPAGQLCLDPGTNDSARLDALFAALVNGSVPRTLR -------------------------1-----2---------------------------- RCCYGYCIDLLERLAEDLAFDFELYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFS -12--------------------------------------------------------- INSARSQVVDFTSPFFSTSLGIMVRTRGTELSGIHDPKLHHPSQGFRFGTVWESSAEAYI ------------------------------------------------------------ KASFPEMHAHMRRHSAPTTPHGVAMLTSDPPKLNAFIMDKSLLDYEVSIDADCKLLTVGK ------------------------------------------------------------ PFAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWY ------------------------------------------ >SERINE PROTEASE INHIBITOR I; SWP:O46162; PDB:1KGMA EVTCEPGTTFKDKCNTCRCGSDGKSAACTLKACPQ ---1---------2--3-1--------3----2-- >2A8 FAB HEAVY CHAIN; SWP:NA; PDB:1Z3GH QLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGQGLEWIGMIHPHSGSTNYNE -------------------1---------------------------------------- KFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARGWDVAYWGQGTLVTVSAAKTTPPS ---------------------------------1-------------------------- VYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSS -------------------2---------------------------------------- VTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD --------------2------------------- >BETA-DEFENSIN 2; SWP:O15263; PDB:1E4QA PVTCLKSGAICHPVFCPRRYKQIGTCGLPGTKCCKKP ---1------2----3---------2------13--- >PHYTOTOXIC PROTEIN PCF; SWP:Q94FS7; PDB:2BICA EDPLYCQAIGCPTLYSEANLAVSKECRDQGKLGDDFHRCCEEQCGSTTPASA -----1----2--------------3------------31---2-------- >EPIDERMAL GROWTH FACTOR; SWP:P01132; PDB:1A3PA PGPSSYDGYCLNGGVMHIESLDSYTCNCVIGYSGDRCQTRDLR ---------1---------------1-2--------2------ >Leukocyte immunoglobulin-like receptor subfamily A member 2; SWP:Q8N149; PDB:2OTPA LPKPTLWAEPGSVIIQGSPVTLRCQGSLQAEEYHLYRENKASWVRRIQEPGKNGQFPIPS -----------------------1------------------------------------ ITWEHAGRYHCQYYSHNHSSEYSDPLELVVTGAYSKPTLSALPSPVVTLGGNVTLQCVSQ ----------1------------------------------------------------- VAFDGFILCKEGEDEHPQCLNSHSHARGWSWAIFSVGPVSPSRRWSYRCYAYDSNSPYVW --------2---------2----------------------------------------- SLPSDLLELLVPG ------------- >C-TYPE LECTIN DOMAIN FAMILY 4 MEMBER K; SWP:Q9UJ71; PDB:3BBSA QGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAGGLIYWIGLT --------------------------1--------------------------------- KAGMEGDWSWVDDTPFNKVQSVRFWIPGEPNNAGNNEHCGNIKAPSLQAWNDAPCDKTFL --------------------------------------2---------------2----- FICKRPYVP --1------ >ANTIBODY 7D11 HEAVY CHAIN; SWP:NA; PDB:2I9LB QVQLQQSGAELAKPGASVKMSCKASGYTFTRYWMHWVKQRPGQGLEWIGYINPSTGYTEY ---------------------1-------------------------------------- NQKFKDKATLTADKSSSTVYMQLSSLTSEDSAVYYCARTTVDGYDFAYWGQGTLVTVSAA -----------------------------------1------------------------ KTTAPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDL -------------------------2---------------------------------- YTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR --------------------2------------------ >25mer peptide from Vacuolar ATP synthase subunit a, vacuolar isoform; SWP:P32563; PDB:2NVJA EFCLNCVSHTASYLRLWALSLAHAQ --1--1------------------- >CELLULASE; SWP:NA; PDB:3B7MA STVELCGQWDTRTVAGGRYTVSNNVWGAETAQCIEVGLETGNFTITRAEHDNGNNVAAYP -----1--------------------------1--------------------------- NIQFAIPQPRRVQELSDVRTSWTLTPITTGRWNAAYDIFFAANPNHVTYSGDAELMIWLN ------------------------------------------------------------ KNGDVMPIGSRVATVELAGATWEVWYADNGAMNVISYVRTTPTTSVTELDLKAFIDDAVA ------------------------------------------------------------ RGYIRPEWYLLSVQTGFELFTGGAGLRSADFSVTVQ ------------------------------------ >PROTEIN SPITZ; SWP:Q01083; PDB:3C9AC PTYKCPETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE ----1--------2-----1------------2-3--------3---- >INSULIN RECEPTOR; SWP:P06213; PDB:2DTGE PGEVCPGMDIRNNLTRLHELENCSVIEGHLQILLMFKTRPEDFRDLSFPKLIMITDYLLL ----1-----------------1------------------------------------- FRVYGLESLKDLFPNLTVIRGSRLFFNYALVIFEMVHLKELGLYNLMNITRGSVRIEKNN ------------------------------------------------------------ ELCYLATIDWSRILDSVEDNHIVLNKDDNEECGDICPGTAKGKTNCPATVINGQFVERCW --2----------------------------2---3---------4------------3- THSHCQKVCPTICKSHGCTAEGLCCHSECLGNCSQPDDPTKCVACRNFYLDGRCVETCPP ----4---5---6----5-----67---8---7--------8--9--------9---a-- PYYHFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMNSSNLLCTP ---------a-----b------c-------c---------b---d------------d-- CLGPCPKVCHLLEGEKTIDSVTSAQELRGCTVINGSLIINIRGGNNLAAELEANLGLIEE e---e---f--------------------f------------------------------ ISGYLKIRRSYALVSLSFFRKLRLIRGETLEIGNYSFYALDNQNLRQLWDWSKHNLTITQ ------------------------------------------------------------ GKLFFHYNPKLCLSEIHKMEEVSGTKGRQERNDIALKTNGDQASCENELLKFSYIRTSFD -----------g--------------------------------g--------------- KILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDP ----------------------------------------h------------------- KSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPIS ------------------------------------------------------------ VSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSELFELDYCLKGLKLPSEHRPFEKV -------------------------------------------i---------------- VNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVTHEI -----------------------j--------j--------------------------- FENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPGNY -------------------------------------i---------------------- SVRIRATSLAGNGSWTEPTYFYVTDYL --------------------------- >BETA-SECRETASE 2; SWP:Q9Y5Z0; PDB:2EWYA LAMVDNLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYIDTYFDTERSST ------------------------------------------------------------ YRSKGFDVTVKYTQGSWTGFVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGIL ------------------------------------------------------------ GLAYATLAKPSSSLETFFDSLVTQANIPNVFSMQMCGANGGSLVLGGIEPSLYKGDIWYT -----------------------------------1------------------------ PIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARA -------------------------2---------------------------------- SLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQLYIQPMMG -----------------3------------------------------------------ AGLNYECYRFGISPSTNALVIGATVMEGFYVIFDRAQKRVGFAASPCAEIAGAAVSEISG ------3---------------------------------------1------------- PFSTEDVASNCVPA ----------2--- >CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-AW68); SWP:P01891; PDB:1TMCA GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYW ------------------------------------------------------------ DRNTRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYRQDAYDG ----------------------------------------1------------------- KDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQWRAYLEGTCVEWLRRYLENG -------------------------------------------1----------- >ENDO-1,3-BETA-GLUCANASE; SWP:Q9L816; PDB:3DGTA SAPAPPSGWSQVFLDDFDGAAGSSVNTANWQFDTGTSYPGGAGNWGTGEVESMTSSTSNV ------------------------------------------------------------ SLDGNGDLLITPRRDASGNWTSGRIETTRTDFQPPAGGKLRVEARLQMPNVTGDAAAGYW ------------------------------------------------------------ PAFWMLGAPFRGNYQNWPGVGELDIMENVQGLNKTWATMHCGTSPGGPCNETSGIGNSTA ----------------------------------------1-------1----------- CPNTTCQSGFHTYTMEWDRSVSPEAIRFSVDGVTYQTVTANQMDAATWTNATNHGFFVIL 2----2------------------------------------------------------ NVAMGGGFPGAFGGGPTGATEPGHPMVVDYVQVTSLSP -------------------------------------- >PHOSPHOLIPASE D; SWP:Q53728; PDB:2ZE4A PPTPHLDAIERSLRDTSPGLEGSVWQRTDGNRLDAPDGDPAGWLLQTPGCWGDAGCKDRA -------------------------------------------------1-----1---- GTRRLLDKMTRNIADARHTVDISSLAPFPNGGFEDAVVDGLKASVAAGHSPRVRILVGAA ------------------------------------------------------------ PIYHLNVVPSRYRDELIGKLGAAAGKVTLNVASMTTSKTSLSWNHSKLLVVDGKTAITGG ------------------------------------------------------------ INGWKDDYLDTAHPVSDVDMALSGPAARSAGKYLDTLWDWTCRNASDPAKVWLATSNGAS -----------------------------------------2------------------ CMPSMEQDEAGSAPAEPTGDVPVIAVGGLGVGIKESDPSSGYHPDLPTAPDTKCTVGLHD 2----------------------------------------------------3------ NTNADRDYDTVNPEENALRSLIASARSHVEISQQDLNATCPPLPRYDIRTYDTLAGKLAA ---------------------------------------3-------------------- GVKVRIVVSDPANRGAVGSGGYSQIKSLDEISDTLRTRLVALTGDNEKASRALCGNLQLA -----------------------------------------------------4------ SFRSSDAAKWADGKPYALHHKLVSVDDSAFYIGSKNLYPAWLQDFGYIVESPAAAQQLKT ------------------------------------------------------------ ELLDPEWKYSQQAAATPAGCP -------------------4- >AMYLOID BETA A4 PROTEIN; SWP:P05067; PDB:1OWTA SDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVE ---------1----------2-------------3---------------2--------- FVCCPL --31-- >CASSIICOLIN; SWP:P84902; PDB:2HGOA TCVSCVNFGNGFCGDNCGNSWACSGC -1--2-------3---1-----3--2 >INTERFERON-GAMMA BINDING PROTEIN C4R; SWP:Q66793; PDB:3BESR TITSYKFESVNFDSKIEWTGNGLYNISLRNYGIKTWQTMYTNVPEGTYDISGFPNNDFVS ------------------------------------------------------------ FWVKFEQGDYKVDKYCTGLCIEVKIGPPTVTLTEYDDHINLYIEHPYATRGSKKIPIYKR -------------------1---------------------------------------- NDMCDIYLLYTANFTFGDSEEPVIYDIDDYDCTSTGCSIDFATTEKVCVMAQGATEGLLD ---1---------------------------2----2----------3------------ KITPWSSEVCLTPKKNVYTCAIRSKEDVPNFKEKMTRVIKRKFNKQSHSYLTKFLGSTSN ---------3-------------------------------------------------- DITTFLSMLD ---------- >ALPHA-BUNGAROTOXIN; SWP:P60615; PDB:2ABXA IVCHTTATIPSSAVTCPPGENLCYRKMWCDAFCSSRGKVVELGCAATCPSKKPYEEVTCC --1------------2------1-----3---3----------2---4----------45 STDKCNHPPKRQPG ----5--------- >ANTILIPOPOLYSACCHARIDE FACTOR; SWP:NA; PDB:2JOBA EAYVQGWEAVAAAVASKIVGLWRNEKTELLGHECKFTVKPYLKRFQVYYKGRMWCPGWTA ---------------------------------1--------------------1----- IRGEASTRSQSGVAGKTAKDFVRKAFQKGLISQQEANQWLSS ------------------------------------------ >BETA-GLUCOSIDASE; SWP:Q42975; PDB:2RGLA WLGGLSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATD ------------------------------------------------------------ QYHRYKEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPY ------------------------------------------------------------ VNLYHYDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGY ------------------------------------------------------------ DQGTNPPKRCTKCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFN ---------1--1----------------------------------------------- WYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKG ------------------------------------------------------------ SADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWG ------------------------------------------------------------ MYGCVNYIKQKYGNPTVVITENGMDQPANLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGA ------------------------------------------------------------ NVAGYFAWSLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDMLKH --------------------------------------------------- >VIOLACIN 1; SWP:NA; PDB:2FQAA SAISCGETCFKFKCYTPRCSCSYPVCK ----1---2----3----1-2----3- >VIR165; SWP:Q72502; PDB:2JNRA LEAIPCSIPPCFAFNKPFVF -----1----1--------- >TH10AOX; SWP:NA; PDB:1IC9A SKYEYTISYTFRGPGCPTLKPITVRCE ---------------1---------1- >THIOREDOXIN N-TERMINALLY FUSED TO PUF60(UHM); SWP:P0AA27; PDB:3DXBA PMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKL ---------------------------------1--1----------------------- NIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGSAMESTVMV ------------------------------------------------------------ LRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASET ------------------------------------------------------------ HKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA ---------------------------------- >INTERLEUKIN-15 RECEPTOR ALPHA CHAIN; SWP:Q60819; PDB:2PSMF TCPPPVSIEHADIRVKNYSVNSRERYVCNSGFKRKAGTSTLIECVINKNTNVAHWTTPSL -1-------------------------2---------------1---------------- KCIRDPSL -2------ >TRYPSIN INHIBITOR II; SWP:P12071; PDB:2ETIA GCPRILMRCKQDSDCLAGCVCGPNGFCG -1------2-----3---1-2-----3- >ANGIOGENIN; SWP:P03950; PDB:1A4YB QDNSRYTHFLTQHYDAKPQGRDDRYCESIMRRRGLTSPCKDINTFIHGNKRSIKAICENK -------------------------1------------2-----------------3--- NGNPHRENLRISKSSFQVTTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDQSIF --------------------1----------2--------------3------------- RRP --- >PROTEIN (GELATINASE A); SWP:P08253; PDB:1CK7A PSPIIKFPGDVAPKTDKELAVQYLNTFYGCPKESCNLFVLKDTLKKMQKFFGLPQTGDLD -----------------------------1----1------------------------- QNTIETMRKPRCGNPDVANYNFFPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARAFQV ------------------------------------------------------------ WSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDD ------------------------------------------------------------ ELWTLGEGQVVRVKYGNADGEYCKFPFLFNGKEYNSCTDTGRSDGFLWCSTTYNFEKDGK ------------------------------------------------------------ YGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDYDRDKKYG --------------------2-------------3-----------2------------- FCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFC -3----------------4-------------5-----------4--------------5 PDQGYSLFLVAAHAFGHAMGLEHSQDPGALMAPIYTYTKNFRLSQDDIKGIQELYGASPL ------------------------------------------------------------ GPVTPEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKID -------6---------------------------------------------------- AVYEAPQEEKAVFFAGNEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTY ------------------------------------------------------------ IFAGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLE ------------------------------------------------------------ NQSLKSVKFGSIKSDWLGC ------------------6 >TRYPSIN/CHYMOTRYPSIN BOWMAN-BIRK INHIBITOR; SWP:P01055; PDB:1BBIA DDESSKPCCDQCACTKSNPPQCRCSDMRLNSCHSACKSCICALSYPAQCFCVDITDFCYE -------12--3-4-------4-2-------5---6--5-7-------7-6------3-- PCKPSEDDKEN -1--------- >RIBOSOMAL PROTEIN L30; SWP:Q5I7K9; PDB:1YSHC KAKKSGENINNKLQLVMKSGKYTLGYKTVLKTLRSSKGKLIILANNCPPLRKSEIEYYAM ----------------------------------------------1------------- LAKISVHHFHGNNVDLGTACGKYYRVCCLSILDPGDSDIISTTT --------------------------1----------------- >PROTEIN AFAD; SWP:Q47038; PDB:2FVNA SAELHLESRGGSGTQLRDGAKVATGRIICREAHTGFHVWMNERQVDGRAERYVVQSKDGR ----------------------------1------------------------------- HELRVRTGGDGWSPVKGEGGKGVSRPGQEEQVFFDVMADGNQDIAPGEYRFSVGGACVVP --------------------------------------------------------1--- QEDNKQGFTPSGTTGTTKLTVT ---------------------- >NEUREXIN-1-ALPHA; SWP:Q28146; PDB:2R16A ATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGR ------------------------------------------------------------ VKLTVNLGKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEF ------------------------------------------------------------ HNIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGF --------------------------------------1-------1-------- >EPHRIN-A1; SWP:P20827; PDB:3CZUB ADRHTVFWNSSNPKFRNEDYTIHVQLNDYVDIICPHYESVADAAMEQYILYLVEHEEYQL ---------------------------------1-------------------------- CQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGKEFKEGHSYYYISKPIHQHEDR 2-----------1----------------------------------------------- CLRLKVTVSG 2--------- >VK1 O18/O8 GERMLINE LIGHT CHAIN VARIABLE DOMAIN; SWP:NA; PDB:2Q20A TDIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVP -----------------------1------------------------------------ SRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPYTFGQGTKLEIK ----------------------------1------------------- >CANDIDAPEPSIN-1; SWP:P28872; PDB:2QZWA QAIPVTLNNEHVSYAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDKPRPGQSADFCK ----------------------------------------------1-----------1- GKGIYTPKSSTTSQNLGTPFYIGYGDGSSSQGTLYKDTVGFGGASITKQVFADITKTSIP ------------------------------------------------------------ QGILGIGYKTNEAAGDYDNVPVTLKNQGVIAKNAYSLYLNSPNAATGQIIFGGVDKAKYS ------------------------------------------------------------ GSLIAVPVTSDRELRITLNSLKAVGKNINGNIDVLLDSGTTITYLQQDVAQDIIDAFQAE ------------------------------------------------------------ LKSDGQGHTFYVTDCQTSGTVDFNFDNNAKISVPASEFTAPLSYANGQPYPKCQLLLGIS --------------2-------------------------------------2------- DANILGDNFLRSAYLVYDLDDDKISLAQVKYTSASNIAALT ----------------------------------------- >GENTISATE 1,2-DIOXYGENASE; SWP:Q5LLB1; PDB:3BU7A RDTPELEAYYDDLAKIETGALWTVANDIEPWEPTPKSAPVHWKWSDLRREVLRAIDLVRP ------------------------------------------------------------ EDAGRRVVYLRNPQRKDVSAACGWLFSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTI ---------------------1-------------------------------------- VDGHKVELGANDFVLTPNGTWHEHGILESGTECIWQDGLDIPLTNCLEANFYEVHPNDYQ ------------------------------------------------------------ TTDIPLNDSPLTYGGPALLPQLDKWDKPYSPLLKYSWEPTYEALLNYAKASDGSPYDGLI ------------------------------------------------------------ LRYTNPQTGGHPMLTMGASMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIVGGKRFDWSE ------------------------------------------------------------ HDIFCVPAWTWHEHCNTQERDDACLFSFNDFPVMEKLGFWAEQALEDNGGHQIVA ----1-------------------------------------------------- >Metal-dependent hydrolases of the beta-lactamase superfamily II; SWP:Q8R8V2; PDB:2P4ZA HGSVEVQVLIENVVFARNFVAEHGLSLLLKKGNKEIVVDTGQSENFIKNCGLMGIDVGRI ------------------------------------------------------------ KKVVLTHGHYDHIGGLKGLLERNPEVKIYTHKEILNKKYAMRKGGQFEEIGFDLSFYEKY ------------------------------------------------------------ KNNFVLIDKDAEIEEGFYVITNTDITYDNEFTTKNFFVEKEGKRIPDKFLDEVFVVVKEE ------------------------------------------------------------ DGINVVTGCSHAGILNILETARNRFGVSYIKSLIGGFHLRGMEEEKVKDIARKIEEYGVK --------1--------------------------------------------------- KVLTGHCTGIDEYGFLKSVLKDKISYLTTSSSIVV ------1---------------------------- >SH3 DOMAIN-CONTAINING KINASE-BINDING PROTEIN 1; SWP:Q96B97; PDB:2K6DA KSKDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLL -----1----------------------------2------------------------- PP -- >AMYLOID LAMBDA 6 LIGHT CHAIN VARIABLE REGION PIP; SWP:NA; PDB:3B5GA NFMLTQSHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVP ---------------------1-------------------------------------- DRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNHVVFGGGTKLTVL ------------------------------1-------------------- >BOWMAN-BIRK TYPE PROTEINASE INHIBITOR; SWP:P01058; PDB:1TABI SESSKPCCDQCSCTKSMPPKCRCSDIRNDFCYEPCK ------12--3-4-------4-2-------3---1- >I-309; SWP:P22362; PDB:1EL0A SKSMQVPFSRCCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQ ----------12--------------3-------1---------------2--------- RHRKMLRHCPSKRK --------3----- >TH1OX; SWP:NA; PDB:1ICLA SKYEYTVSYTFRGPGCPTVKPISLRCE ---------------1---------1- >Leukocyte immunoglobulin-like receptor subfamily B member 2; SWP:Q8N423; PDB:2DYPD IPKPTLWAEPDSVITQGSPVTLSCQGSLEAQEYRLYREKKSASWITRIRPELVKNGQFRI -----------------------1------------------------------------ PSITWEHTGRYGCQYYSRARWSELSDPLVLVMTGAYPKPTLSAQPSPVVTSGGRVTLQCE ------------1---------------------------------------------2- SQVAFGGFILCKEEHPQCLNSQSSRAIFSVGPVSPNRRWSHRCYGYDLNSPYVWSSPSDL ----------3------3------------------------2----------------- LELLV ----- >SERINE PROTEASE INHIBITOR I; SWP:O46162; PDB:1KIOA EVTCEPGTTFKDKCNTCRCGSDGKSAACTRMACPQ ---1---------2--3-1--------3----2-- >MINICOLLAGEN-5; SWP:NA; PDB:2OQ9A APMQAPVQAAPACMASCAPQCCGR ------------1---2---21-- >Obtustatin; SWP:P83469; PDB:1MPZA CTTGPCCRQCKLKPAGTTCWKTSLTSHYCTGKSCDCPLYPG 1----23--1--------4---------2----3-4----- >PROTEIN (PEPTIDYLGLYCINE ALPHA-HYDROXYLATING MONOOXYGENASE); SWP:P14925; PDB:1OPMA NECLGTIGPVTPLDASDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMD --1---------------------------------2----------------------- TVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGS ---------3-----------2----3--------------------------------- KYFVLQVHYGDISAFRDNHKDCSGVSVHLTRVPQPLIAGMYLMMSVDTVIPPGEKVVNAD ---------------------1-------------------------------------- ISCQYKMYPMHVFAYRVHTHHLGKVVSGYRVRNGQWTLIGRQNPQLPQAFYPVEHPVDVT --4--------------------------------------------------------- FGDILAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKYALSFMTCTKNVAPDMFR --------5---------------------5------------------4---------- TIPAEANIPI ---------- >SMALL-INDUCIBLE CYTOKINE B10; SWP:P17515; PDB:2R3ZA IPLARTVRCNCIHIDDGPVRMRAIGKLEIIPASLSCPRVEIIATMKKNDEQRCLNPESKT --------1-2------------------------1----------------2------- IKNLMKAF -------- >GLUCAGON-LIKE PEPTIDE 1 RECEPTOR; SWP:P43220; PDB:3C59A TVSLWETVQKWREYRRQCQRSLTEDPPPATDLFCNRTFDEYACWPDGEPGSFVNVSCPWY -----------------1---------------2--------1-------------3--- LPWASSVPQGHVYRFCTAEGLWLQKDNSSLPWRDLSECEESKR ---------------2---------------------3----- >TCR B3K506 ALPHA CHAIN; SWP:P14434; PDB:3C5ZA DSVTQTEGNVALSEEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRG ---------------------1-------------------------------------- FEATYDKGTTSFHLRKASVQESDSAVYYCALVISNTNKVVFGTGTRLQVLPNIQNPDPAV ----------------------------1------------------------------- YQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKS -------------2---------------------------------------------- DFACANAFNNSIIPEDTFFPSP ---2------------------ >METHYLAMINE DEHYDROGENASE, HEAVY CHAIN; SWP:P29894; PDB:1MG2A EAETQAQETQGQAAARAAAADLAAGQDDEPRILEAPAPDARRVYVNDPAHAAAVTQQFVI ------------------------------------------------------------ DGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTAD ------------------------------------------------------------ IELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHI --------------------------------------------------------1--- FPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPT -----------1------------------------------------------------ YTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEW ------------------------------------------------------------ RHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG ------------------------------------------------------------ EELRSVNQLGHGPQVITTADMG ---------------------- >PARALYTIC PEPTIDE I; SWP:P30253; PDB:1HRLA ENFAGGCATGYLRTADGRCKPTF ------1-----------1---- >OVOMUCOID THIRD DOMAIN; SWP:P01003; PDB:1OVOA LAAVSVDCSEYPKPACPKDYRPVCGSDNKTYSNKCNFCNAVVESNGTLTLNHFGKC -------1-------2-------3----------2--1-----------------3 >COMPONENT OF SODIUM-DRIVEN POLAR FLAGELLAR MOTOR; SWP:P74944; PDB:2ZF8A VMGKRYVATPQQSQWEMVVNTPLECQLVHPIPSFGDAVFSSRANKKINLDFELKMRRPMG ------------------------1----------------------------------- ETRNVSLISMPPPWRPGEHADRITNLKFFKQFDGYVGGQTAWGILSELEKGRYPTFSYQD ------------------------------------------------------------ WQSRDQRIEVALSSVLFQNKYNAFSDCISNLLKYSFEDIAFTILHYERQGDQLTKASKKR --------------------------1--------------------------------- LSQIADYIRHNQDIDLVLVATYSASQSLSERRAESLRDYFQSLGLPEDRIQVQGYGRVVI ------------------------------------------------------------ SLGRTQ ------ >CODAKINE; SWP:Q3KVL7; PDB:2VUVA GCPDGWTQFLDLCYIYQSAKASWASAQSSCQALGGILAEPDTACENEVLIHMCKENGDAG -1----------1----------------2-------------3---------------- SFGPWLGGQKVGGAWQWSSSGAAFDYLRWGNEPNNSGGNEDCLHYNWLSWNDLRCHYQAS -----------------------------------------4------------4----- YLCQRAAE --2----- >PROTEIN (EPO MIMETICS PEPTIDE 33); SWP:NA; PDB:1EBAC TSCHFGPLTWVCKPQ --1--------1--- >PROTEIN FIMG; SWP:P08190; PDB:3BFQG AKPCTVSTTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADST ---1-------------------------------------1------------------ GYYKNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGT ------------------------------------------------------------ IQAVISITYTYS ------------ >COLLAGEN TYPE VI; SWP:P12111; PDB:1KNTA TDICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCA ---1--------2---------------3-------2------------3---1- >CHIMERIC MINI-PROTEIN; SWP:NA; PDB:1D5QA CNLARCQLSCKSLGLKGGCQGSFCTCG 1----2---3--------1----2-3- >VITAMIN-K DEPENDENT PROTEIN C; SWP:P04070; PDB:1LQVC ANSFLLRHSSLRCIICDFAKIFQN ------------1--1-------- >DIPEPTYDIL-PEPTIDASE I EXCLUSION DOMAIN; SWP:P53634; PDB:1K3BA DTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQEKKVVVYLQKLDTAYDDLGNSGHF -----1-----------------------2------------------------------ TIIYNQGFEIVLNDYKWFAFFKYKEEGSKVTTYCNETMTGWVHDVLGRNWACFTGKKVG ---------------------------------1-----------------2------- >SVIB; SWP:P28881; PDB:1MVJA CKLKGQSCRKTSYDCCSGSCGRSGKC 1------2------31---2-----3 >BETA-GALACTOSIDE ALPHA-2,6-SIALYLTRANSFERASE; SWP:A8QYL1; PDB:2Z4TA TQSIIKNDINKTIIDEEYVNLEPINQSNISFTKHSWVQTCGTQQLLTEQNKESISLSVVA ---------------------------------------1-------------------- PRLDDDEKYCFDFNGVSNKGEKYITKVTLNVVAPSLEVYVDHASLPTLQQLMDIIKSEEE ---------1-------------------------------------------------- NPTAQRYIAWGRIVPTDEQMKELNITSFALINNHTPADLVQEIVKQAQTKHRLNVKLSSN ------------------------------------------------------------ TAHSFDNLVPILKELNSFNNVTVTNIDLYDDGSAEYVNLYNWRDTLNKTDNLKIGKDYLE ------------------------------------------------------------ DVINGINEDTSNTGTSSVYNWQKLYPANYHFLRKDYLTLEPSLHELRDYIGDSLKQMQWD ------------------------------------------------------------ GFKKFNSKQQELFLSIVNFDKQKLQNEYNSSNLPNFVFTGTTVWAGNHEREYYAKQQINV ------------------------------------------------------------ INNAINESSPHYLGNSYDLFFKGHPGGGIINTLIMQNYPSMVDIPSKISFEVLMMTDMLP ------------------------------------------------------------ DAVAGIASSLYFTIPAEKIKFIVFTSTETITDRETALRSPLVQVMIKLGIVKEENVLFWA ------------------------------------------------------------ DLPNCETGVCIAV ----2----2--- >PROTEIN (LOW DENSITY LIPOPROTEIN RECEPTOR RELATED PROTEIN); SWP:Q07954; PDB:1CR8A PGGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCEGV ---1------2-----1------3-----2--------3--- >AGGRETIN BETA CHAIN; SWP:Q9I840; PDB:2VRPB DCPSGWSSYEGHCYKPFNEPKNWADAERFCKLQPKHSHLVSFQSAEEADFVVKLTRPRLK -1----------1----------------2------------------------------ ANLVWMGLSNIWHGCNWQWSDGARLNYKDWQEQSECLAFRGVHTEWLNMDCSSTCSFVCK -----------------------------------3--------------3-------2- FKA --- >TRANSCRIPTION FACTOR PF0095; SWP:Q8U4J2; PDB:2QLZA EPDLFYILGNKVRRDLLSHLTCECYFSLLSSKVSVSSTAVAKHLKIEREGVLQSYEKEET ---------------------1-1------------------------------------ KKYYKISIAKSYVFTLTPEFWYKGLDLGDAELRDFEISLSGLDTEPSTLKEITDFIKANK ------------------------------------------------------------ ELEKVLEAFKTIESYRSSLRKIKEAYLKEIGDTQLAILHYLLLNGRATVEELSDRLNLKE ------------------------------------------------------------ REVREKISEARFVPVKIINDNTVVLDEDQILR -------------------------------- >H-2 class II histocompatibility antigen, E-K alpha chain; SWP:P01903; PDB:2FSEA EHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANI ------------------------------------------------------------ AVDKANLEIMTKRSNYTPITNVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLR -------------------------------------------1---------------- NGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYDCEVDHWGLEEPLRKHWEFE ---------------------------------------1------------------ >KALATA B1; SWP:P56254; PDB:1JJZA NGLPVCGETCVGGTCNTPGCTCSWPVCTR -----1---2----3----3-2----1-- >MYELOPEROXIDASE; SWP:P05164; PDB:1CXPA CPEQDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVAL 1------------1---------------------------------------------- ARAVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPA -------------------------------------------- >Tumor necrosis factor receptor superfamily member 13C; SWP:Q96RJ3; PDB:2HFGR APAPTPCNPAECFDPLVRHCVACGLLR ------1----2-------1--2---- >R9; SWP:NA; PDB:1SJVA GGGLVQAGESLKLSCAASGGFMGWYRQAPGKQRELVATINSRGITNYADFVKGRFTISRD --------------1--------------------------------------------- NAKKTVYLEMNSLEPEDTAVYYCYTHYFRSYWGQGTQVTVSS ----------------------1------------------- >MITOCHONDRIAL UBIQUINOL-CYTOCHROME C REDUCTASE; SWP:NA; PDB:3CWBH EEEELVDPLTTIREHCEQTEKCVKARERLELCDARVSSRSHTEEQCTEELFDFLHARDHC ---------------1---------------2-------------2-------------1 VAHKLFNKLK ---------- >LACCASE; SWP:NA; PDB:2QT6A AVGPVADLTVTNANIVPDGFERAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKT ------------------------------------------------------------ TSIHWHGFFQKGTNWADGPAFINQCPIASGNSFLYDFQVPGQAGTFWYHSHLSTQYCDGL ------------------------1-------------------------------2--- RGPFVVYDPNDPHANLYDVDDESTVITLADWYHVAAKLGPRFPKGADSTLINGLGRSTST ------------------------------------------------------------ PTADLAVISVTKGKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFA ------------------------2----------------------------------- AQRYSFVLNANQDVDNYWIRANPNFGTTGFADGVNSAILRYDDADPVEPVTNQTGTTLLL ------------------------------------------------------------ ETDLHPLTSMPVPGNPTQGGADLNLNMAFNFDGTNFFINGESFTPPTVPVLLQIISGANT ------------------------------------------------------------ AQDLLPSGSVYSLPSNSSIEITFPATTAAPGAPHPFHLHGHVFAVVRSAGSTSYNYDDPV ------------------------------------------------------------ WRDVVSTGTPQAGDNVTIRFQTDNPGPWFLHCHIDFHLDAGFAVVMAEDIPNTVNANPVP ------------------------------------------------------------ QAWSNLCPTYDALEPSNE ------1----------- >VBETA8.2; SWP:NA; PDB:2Q86B AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPD --------------------1--------------------------------------- GYKASRPSQENFSLILELATPSQTSVYFCASGGGGTLYFGAGTRLSVLEDLRNVTPPKVS ----------------------------1------------------------------- LFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVCTDPQAYKESNYSYCL ------------------2----------------------------------------- SSRLRVSATFWHNPRNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRA -------------------2--------------------------------- >HEPATOCYTE GROWTH FACTOR RECEPTOR; SWP:P08581; PDB:1SSLA GSAMGCRHFQSCSQCLSAPPFVQCGWCHDKCVRSEECLSGTWTQQICL -----1-----2--3--------1--4---3-----4---------2- >ADAMTS-4; SWP:O75173; PDB:2RJPA ASLSRFVETLVVADDKMAAFHGAGLKRYLLTVMAAAAKAFKHPSIRNPVSLVVTRLVILE ------------------------------------------------------------ GPQVGPSAAQTLRSFCAWQRGLNTPEDSDPDHFDTAILFTRQDLCGVSTCDTLGMADVGT ---------------1----------------------------2----2---------- VCDPARSCAIVEDDGLQSAFTAAHQLGHVFNMLHDNSKPCISLNGPLSTSRHVMAPVMAH -3-----1-------------------------------4-------------------- VDPEEPWSPCSARFITDFLDNGYGHCLLDKPEAPLHLPVTFPGKDYDADRQCQLTFGPDS ---------4---------------3-------------------------5-------- RHCPQLPPPCAALWCSGHLNGHAMCQTKHSPWADGTPCGPAQACMGGRCLH --6------7----5---------6------------8-----7----8-- >GITR LIGAND; SWP:Q80YG2; PDB:2Q8OA IESCMVKFELSSSKWHMTSPKPHCVNTTSDGKLKILQSGTYLIYGQVIPVDKKYIKDNAP ---1-------------------1------------------------------------ FVVQIYKKNDVLQTLMNDFQILPIGGVYELHAGDNIYLKFNSKDHIQKNNTYWGIILMPD ------------------------------------------------------------ LPFIS ----- >GLUTAMATE [NMDA] RECEPTOR SUBUNIT 3A; SWP:Q9R1M7; PDB:2RC7A KLHLRVVTLIEHPFVFTREVDDEGLCPAGQLCLDPMTNDSSMLDRLFSSLHSSNDTVPIK -------------------------1-----2---------------------------- FKKCCYGYCIDLLEQLAEDMNFDFDLYIVGDGKYGAWKNGHWTGLVGDLLSGTANMAVTS ---12------------------------------------------------------- FSINTARSQVIDFTSPFFSTSLGILVRTRGTELSGIHDPKLHHPSQGFRFGTVRESSAED ------------------------------------------------------------ YVRQSFPEMHEYMRRYNVPATPDGVQYLKNDPEKLDAFIMDKALLDYEVSIDADCKLLTV ------------------------------------------------------------ GKPFAIEGYGIGLPPNSPLTSNISELISQYKSHGFMDVLHDKWY -------------------------------------------- >PROLACTIN-INDUCIBLE PROTEIN; SWP:P12273; PDB:3ES6B QDNTRKIIIKNFDIPKSVRPNDEVTAVLAVQTELKECMVVKTYLISSIPLQGAFNYKYTA ------------------------------------1----------------------- CLCDDNPKTFYWDFYTNRTVQIAAVVDVIRELGICPDDAAVIPIKNNRFYTIEILKVE 2-1-------------------------------2----------------------- >DICKKOPF-RELATED PROTEIN 2; SWP:Q9QYZ8; PDB:2JTKA MPHIKGHEGDPCLRSSDCIDGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRC -----------1-----2----31--------2---------4----------------3 DCAKGLSCKVWKDATYSSKARLHVCQKI -5-----4----------------5--- >NUCLEOCAPSID PROTEIN; SWP:P18042; PDB:1NC8A AQQRKVIRCWNCGKEGHSARQCRAPRRQG --------1------------1------- >RNASE ZF-1A; SWP:NA; PDB:2VQ8A QPEHVKERYKNFLNQHVGPDMSVQRCNSEIGPNNRKITLSGTDNGCKPVNTFILANKRLI -------------------------1-------------------2-------------- KTVCGRAGSPQGNMVRSNQPFPVVKCVLNNGERHPYCEYRGTRSTRYIVLKCEEGWPVHY ---3---------------------1----------2--------------3-------- HEDEVN ------ >PARALYTIC PEPTIDE; SWP:Q95YI2; PDB:1IRRA ENFVGGCATGFKRTADGRCKPTF ------1-----------1---- >Fab fragment of anti-osteopontin antibody 23C3, Heavy chain; SWP:NA; PDB:3CXDH EVQLVESGGGLVQPKGSLKISCAASGFTFNIYAMNWVRQAPGKGLEWVARIRSQSNNYTT ---------------------1-------------------------------------- YYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVRQMGDYWGQGTTLTVSSAVKT -------------------------------------1---------------------- PPSVYPLAPGGGAISNSMVTLGCLVNGYFPEPVTVTWNAGSLGSGVHTFPAVLQSDLYTL ----------------------2------------------------------------- SSSVTVPVSTWPSEAVTCNVAHPASATSVDKAISPV -----------------2------------------ >INTERLEUKIN-6 RECEPTOR BETA CHAIN; SWP:P40189; PDB:1I1RA LLDPCGYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIIN ----1-------------------2-----1----------------------------- RTASSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMR -------------------2------------------------------3--------- CEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENA 3---------------------------4---------4--------------------- LGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRT ------------------------------------------------------------ KDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE ------------------------------------------------------------ D - >IMMUNOGLOBULIN IOTA CHAIN; SWP:P12018; PDB:2H32A QPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQ ---------------------1-------------------------------------- GPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGARSSEKEERERE -----------------------------------1--------------- >Major histocompatibility complex class I glycoprotein haplotype B21; SWP:Q95601; PDB:3BEVA ELHTLRYIRTAMTDPGPGLPWFVDVGYVDGELFMHYNSTARRAVPRTEWIAANTDQQYWD ------------------------------------------------------------ RETQIVQGSEQINRENLDILRRRYNQTGGSHTVQWMSGCDILEDGTIRGYHQAAYDGRDF --------------------------------------1--------------------- VAFDKGTMTLTAAVPEAVPTKRKWEEGGYAEGLKQYLEETCVEWLRRYVEYGKAELGRRE ----------------------------------------1------------------- RPEVRVWGKEADGILTLSCRAHGFYPRPIVVSWLKDGAVRGQDAQSGGIVPNGDGTYHTW ------------------2----------------------------------------- VTIDAQPGDGDKYQCRVEHASLPQPGLYSWRSGG --------------2------------------- >SIGNAL REGULATORY PROTEIN GAMMA; SWP:Q9P1W8; PDB:2JJWA LQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQKEGHFPRVTTV ---------------------1-------------------------------------- SDLTKRNNMDFSIRISSITPADVGTYYCVKFRKNVEFKSGPGTEMALGAKP ---------------------------1----------------------- >UL18 PROTEIN; SWP:Q4A1U8; PDB:3D2UA HVLRYGYTGIFDDTSHMTLTVVGIFDGQHFFTYHVQSSDKASSRANGTISWMANVSAAYP ------------------------------------------------------------ TYLDGERAKGDLIFNQTEQNLLELEIALGYRSQSVLTWTHECNTTENGSFVAGYEGFGWD -----------------------------------------1------------------ GETLMELKDNLTLWTGPNYEISWLKQQKTYIDGKIKNISEGDTTIQRNYLKGNCTQWSVI -----------------------------------------------------1------ YSGFQPPVTHPVVKGGVRNQNDNRAEAFCTSYGFFPGEIQITFIHYGDKVPEDSEPQCNP ----------------------------2----------------------------3-- LLPTLDGTFHQGCYVAIFSNQNYTCRVTHGNWTVEIPISVT ------------3-----------2---------------- >APICAL MEMBRANE ANTIGEN 1; SWP:P22621; PDB:1YXEA NAKFGLWVDGNCEDIPHVNEFPAIDLFECNKLVFELSASDQPKQYEQHLTDYEKIKEGFK -----------1----------------2------------------------------- NKNASMIKSAFLPTGAFKADRYKSHGKGYNWGNYNTETQKCEIFNVKPTCLINNSSYIAT ----------------------------------------2--------1---------- TALSHPIE -------- >Tyrosine-protein phosphatase non-receptor type substrate 1; SWP:P97797; PDB:2YZ1A ELKVTQPEKSVSVAAGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTN ----------------------1------------------------------------- VSDATKRNNMDFSIRISNVTPEDAGTYYCVKFQKGPSEPDTEIQSGGGTEVYVL ----------------------------1------------------------- >SYLVATICIN; SWP:NA; PDB:2POSA WEETKECAFTEFFKLAPLASNPALSVCQDASGWQMLPPAGYPTPEQLKLMCGTAECFTLI ------1-------------------2-----------------------3----2---- DAIKALNPNDCILVFGDVRLNVKKLVTEFEPSCF ----------1---------------------3- >NEMATOCYST OUTER WALL ANTIGEN; SWP:Q8IT70; PDB:2HM4A GSQITGTCPSGCSGDCYPECPPGCCGQVNLN -------1---2---3---1---32------ >CHLORIDE INTRACELLULAR CHANNEL PROTEIN 2; SWP:O15247; PDB:2PERA DPEIELFVKAGSDGESIGNCPFCQRLFMILWLKGVKFNVTTVDMNPPFLVYNKELKTDFI -------------------1--1------------------------------------- KIEEFLEQTLAPPRYPHLSPKYKESFDVGCNLFAKFSAYIKNTQKEANKNFEKSLLKEFK ------------------------------------------------------------ RLDDYLNTPLLDEIDPDSAEEPPVSRRLFLDGDQLTLADCSLLPKLNIIKVAAKKYRDFD ------------------------------------------------------------ IPAEFSGVWRYLHNAYAREEFTHTCPEDKEIENTYANVAKQK ------------------------------------------ >NOVEL IMMUNE-TYPE RECEPTOR 10; SWP:Q8UWK5; PDB:2QHLA DIKELHVKTVKRGENVTMECSMSKVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEG -------------------1---------------------------------------- FKDSRFSMTVNDQKFDLNIIGTREDDGGEYFCGEVEGNTIKFTSGTRLQF -------------------------------1------------------ >ROBUSTOXIN; SWP:P01478; PDB:1QDPA CAKKRNWCGKNEDCCCPMKCIYAWYNQQGSCQTTITGLFKKC 1------2-----314---2----------3----------4 >S1P4 FIRST EXTRACELLULAR LOOP PEPTIDOMIMETIC; SWP:P53365; PDB:2DCOA GSYDAYRTDCEELSGARTFRLAPAQWSCRETFQA ---------1-----------------1------ >FAB FRAGMENT MOR03268 HEAVY CHAIN; SWP:NA; PDB:2JB5H QLVQSGAEVKKPGSSVKVSCKASGGTFSNYAINWVRQAPGQGLEWMGNIEPYFGTANYAQ -------------------1---------------------------------------- KFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARYFMSYKHLSDYWGQGTLVTVSSAS ---------------------------------1-------------------------- TKGPSVFPLAPSSKSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL ---------------------2-------------------------------------- SSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS -----------------2------------------- >Saccharopine dehydrogenase [NAD+, L-lysine-forming; SWP:P38998; PDB:2Q99A AAVTLHLRAETKPLEARAALTPTTVKKLIAKGFKIYVEDSPQSTFNINEYRQAGAIIVPA ------------------------------------------------------------ GSWKTAPRDRIIIGLKEPETDTFPLVHEHIQFAHCYKDQAGWQNVLRFIKGHGTLYDLEF ------------------------------------------------------------ LENDQGRRVAAFGFYAGFAGAALGVRDWAFKQTHSDDEDLPAVSPYPNEKALVKDVTKDY ------------------------------------------------------------ KEALATGARKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGPFDEIPQA ---------------------1-------------------------------------- DIFINCIYLSKPIAPFTNEKLNNPNRRLRTVVDVSADTTNPHNPIPIYTVATVFNKPTVL -----1------------------------------------------------------ VPTTAGPKLSVISIDHLPSLLPREASEFFSHDLLPSLELLPQRKTAPVWVRAKKLFDRHC ------------------------------------------------------------ ARVKRSSRL --------- >MATUZUMAB FAB LIGHT CHAIN; SWP:NA; PDB:3C08L MTQSPSSLSASVGDRVTITCSASVTYMYWYQQKPGKAPKLLIYDTSNLASGVPSRFSGSG -------------------1---------------------------------------- SGTDYTFTISSLQPEDIATYYCQQWSSHIFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLK ---------------------1-------------------------------------- SGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADY -------2---------------------------------------------------- EKHKVYACEVTHQGLSSPVTKSFNRG -------2------------------ >CHEMOSENSORY PROTEIN CSP2; SWP:Q9NG96; PDB:1K19A EDKYTDKYDNINLDEILANKRLLVAYVNCVMERGKCSPEGKELKEHLQDAIENGCKKCTE ----------------------------1------1------------------2--2-- NQEKGAYRVIEHLIKNEIEIWRELTAKYDPTGNWRKKYEDRAKAAGIVIPEE ---------------------------------------------------- >NA; SWP:Q02223; PDB:1OQDK CSQNEYFDSLLHACIPCQLRCSSNTPPLTCQRYCNASVT 1------------1--2---3--------2---3----- >DISINTEGRIN ACOSTATIN-BETA; SWP:Q805F6; PDB:3C05B ANPCCDAATCKLTTGSQCADGLCCDQCKFMKEGTVCRRARGDDLDDYCNGISAGCPRNP ---1-------------2----32--1--------4-----------3------4---- >DAMAGE-SPECIFIC DNA BINDING PROTEIN 1; SWP:NA; PDB:2B5LA MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK -----------------1------------------------------------------ IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI ------------------------------------------------------------ IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF ------------------------------------------------------------ VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH ------------------------------------------------------------ NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL ------------------------------------------------------------ RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV ------------1----------------------------------------------- DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE ------------------------------------------------------------ TYDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS ------------------------------------------------------------ QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC ------------------------------------------------------------ LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH ------------------------------------------------------------ YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY ------------------------------------------------------------ SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES ------------------------------------------------------------ PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSTSFGEEV ------------------------------------------------------------ EVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQG ------------------------------------------------------------ RIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKDVRTECNHY ------------------------------------------------------------ NNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFL ------------------------------------------------------------ GAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGSTPTQGSV ------------------------------------------------------------ LFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGF ------------------------------------------------------------ IDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH ---------------------------------------------------- >VERONICA HEDERIFOLIA TRYPSIN INHIBITOR; SWP:NA; PDB:2CMYB CKVMCYAQRSPELLRRCLDNC 1---2-----------2---1 >COAGULATION FACTOR XA; SWP:P00742; PDB:1FJSA IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTE ------1----1--------------2---------------2----------------- QEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLM ------------------------------------------------------------ >BETA-LACTAMASE TEM; SWP:P62593; PDB:2V1ZA PETLVKVKDAEDQLCRTSHRPCRVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAV --------------1------1----------------------------------2--- LSRIDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLT ------------------------------------------2----------------- TIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLT ------------------------------------------------------------ LASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGRRGSRGIIAALGPDGKPSRIVV ------------------------------------------------------------ IYTTGSRKKTDERNRQIAEIGASLIKHWGL ------------------------------ >CIRCULARLY PERMUTED (1-3,1-4)-BETA-D-GLUCAN 4-GLUCANOHYDROLASE; SWP:P23904; PDB:1AJKA NTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTKVQFNYYTNGVGGHEKVISLGFDASKG ------------------------------------------------------------ FHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMMNLWNGTDDWLGSYNGANPLYAE ------------------------------------------------------------ YDWVKYTSNQTGGSFFEPFNSYNSGTWEKADGYSNGGVFNCTWRANNVNFTNDGKLKLGL ----------------------------------------1------------------- TSSAYNKFDCAEYRSTNIYGYGLYEVSMKPAK ---------1---------------------- >FD GENE 3 PROTEIN; SWP:P03661; PDB:1FGPA ETVESCLAKPHTENSFTNVWKDDKTLDRYANYEGCLWNATGVVVCTGDETQCYGTWVPIG -----1----------------------------1---------2------2-------- LAIPENAAAH ---------- >MDC-SIGN2 TYPE I ISOFORM; SWP:NA; PDB:1K9JA CRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNR ---1----------1----------------2---------------------------- FSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVD -------------------------------------------3------------3--- NYWICKKPAA ----2----- >SINGLE-CHAIN FV FRAGMENT 1696; SWP:NA; PDB:1JP5A DILMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRF ----------------------1------------------------------------- SGVPDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKEVQLQQSG --------------------------------1--------------------------- PELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRF -------------2---------------------------------------------- AFSLDTSTSTAFLQINNLKNEDTATYFCVRDRHDYGEIFTYWGQGTTVTVSS ---------------------------2------------------------ >ROUNDABOUT HOMOLOG 1; SWP:Q9Y6N7; PDB:2V9QA LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRM ----------------------------1------------------------------- LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVM --------------------------1--------------------------------- VAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVC ----------2------------------------------------------------2 VGTNMVGERESEVAELTVLERPSFVKAA ---------------------------- >anti egfr antibody fab, heavy chain; SWP:NA; PDB:2Z4QB QVQLQQSGSEMARPGASVKLPCKASGDTFTSYWMHWVKQRHGHGPEWIGNIYPGSGGTNY ---------------------1-------------------------------------- AEKFKNKVTLTVDRSSRTVYMHLSRLTSEDSAVYYCTRSGGPYFFDYWGQGTSLTVSSAK -----------------------------------1------------------------ TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLY ------------------------2----------------------------------- TLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR -------------------2------------------ >METHANOL DEHYDROGENASE LIGHT SUBUNIT; SWP:P38540; PDB:1G72B YDGQNCKEPGNCWENKPGYPEKIAGSKYDPKHDPVELNKQEESIKAMDARNAKRIAN -----1-----1--------------------------------------------- >POLYPHENOL OXIDASE, CHLOROPLAST; SWP:P43311; PDB:2P3XA APIQAPDISKCGTATVPDGVTPTNCCPPVTTKIIDFQLPSSGSPMRTRPAAHLVSKEYLA ----------1-------------21---------------------------------- KYKKAIELQKALPDDDPRSFKQQANVHCTYCQGAYDQVGYTDLELQVHASWLFLPFHRYY ---------------------------2-------------------------------- LYFNERILAKLIDDPTFALPYWAWDNPDGMYMPTIYASSPSSLYDEKRNAKHLPPTVIDL ------------------------------------------------------------ DYDGTEPTIPDDELKTDNLAIMYKQIVSGATTPKLFLGYPYRAGDAIDPGAGTLEHAPHN ------------------------------------------------------------ IVHKWTGLADKPSEDMGNFYTAGRDPIFFGHHANVDRMWNIWKTIGGKNRKDFTDTDWLD ------------------------------------------------------------ ATFVFYDENKQLVKVKVSDCVDTSKLRYQYQDIPIPWLP --------------------------------------- >SERINE PROTEINASE INHIBITOR KAZAL TYPE 5; SWP:Q9NQ38; PDB:1UVFA DSEMCKDYRVLPRIGYLCPKDLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKCE ----1------------2-------3----------2--1-----------------3- >INTERCELLULAR ADHESION MOLECULE 5; SWP:Q9UMF0; PDB:3BN3B EPFWADLQPRVAFVERGGSLWLNCSTNCPRPERGGLETSLRRNGTQRGLRWLARQLVDIR -----------------------1---2-------------------------------- EPETQPVCFFRCARRTLQARGLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRA -------1---2--------------------------------------3--------- SLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLARREDHGANFSCRAELDLRPHGLGL ----------------------------------------------3------------- FENSSAPRELRTFSLS ---------------- >DIPEPTIDYL PEPTIDASE IV; SWP:P95782; PDB:2ECFA KLTLEAITGPLPLSGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVD ------------------------------------------------------------ SKVVLAMTGIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP ------------------------------------------------------------ KGGFVSFIRGRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS ------------------------------------------------------------ AIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDL ------------------------------------------------------------ GKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNS ------------------------------------------------------------ LRFLDDGSILWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAGIE ------------------------------------------------------------ SARESQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEK ------------------------------------------------------------ IATLVENDLADPKHPYARYREAQRPVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAV ------------------------------------------------------------ YVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTV ------------------------------------------------------------ EVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGL -----------------------------------------------1------------ YDSHYTERYMDLPARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQ ------------------------------------------------------------ KRGQPFELMTYPGAKHGLSGADALHRYRVAEAFLGRCLKP ------------------------------------1--- >ANTIMICROBIAL PEPTIDE 2; SWP:P27275; PDB:1MMCA VGECVRGRCPSGMCCSQFGYCGKGPKYCGR ---1----2----31-----2------3-- >NEW ANTIGEN RECEPTOR ANCESTRAL; SWP:NA; PDB:2I26N RVDQTPQTITKETGESLTINCVLRDSNCALSSTYWYRKKSGSTNEESISKGGRYVETVNS --------------------1------2-------------------------------- GSKSFSLRINDLTVEDSGTYRCKPESRYGSYDAECAALNDQYGGGTVVTVNAAAHHHH ---------------------1------------2----------------------- >Coagulation factor X-activating enzyme light chain 2; SWP:Q4PRD2; PDB:2E3XB DCPPDSSLYRYFCYRVFKEHKTWEAAERFCMEHPNNGHLVSIESMEEAEFVAKLLSNTTT -1----------1----------------2------------------------------ HFWIGLMIKDKEQECSSEWSDGSSVSYDKLGKQEFRKCFVLEKESGYRMWFNRNCEERYL -------------------------------------3----------------3----- FVCKVPPEC --2------ >DELTA-CONOTOXIN TXVIA; SWP:P18511; PDB:1FU3A WCKQSGEMCNLLDQNCCDGYCIVLVCT -1------2------31---2----3- >TGF-BETA RECEPTOR TYPE-1; SWP:P36897; PDB:2PJYC ALQCFCHLCTKDNFTCVTDGLCFVSVTETTDKVIHNSSCIAEIDLIPRDRPFVCAPSSKT ---1-2--2------3-----1----------------3--------------4------ GSVTTTYCCNQDHCNKIEL -------45----5----- >OMEGA-CONOTOXIN MVIIC; SWP:P37300; PDB:1V4QA CKGKGAPCRKTMYDCCKGRCGRRGRC 1------2------31---2-----3 >PUTATIVE 4-AMINO-4-DEOXYCHORISMATE LYASE; SWP:Q5SKM2; PDB:2ZGIA RLLNGTPLALALPEAFLYHGASVFTTLRAEGGRPLWLEEHLARLRRHALALGLSYPGDEA ------------------------------------------------------------ FLEDLEALLRAFPKAPCLRLRFTVGEGVRLSEARPYAPLPLSLYREGVRVRLTGYRVHPD ----------------1------------------------------------------- LARYKTGNYLPYRLALEEARKEGAFEGLLLDAFGHVVDGSRTSPLLFREGTLYLLEGGLE ------------------------------------------------------------ GITREKVAEAARGLGLRVERGLFRPEGLRGHLLLAGSGVGLLPVRPPPPELLPLIERFLP ------------------------------------------------------------ ACY -1- >VIOLA HEDERACEA ROOT PEPTIDE 1; SWP:NA; PDB:1VB8A CAESCVWIPCTVTALLGCSCSNKVCYNGIP 1---2----3-------1-2----3----- >IMMUNOGLOBULIN LIGHT CHAIN; SWP:NA; PDB:2V7NA DIVLTQSPATLSLSPGERATLSCRASQSVSSNYLAWYQQKPGQAPRLLIYDSSSRATGVP ----------------------1------------------------------------- ARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVEIKRTVAAPSVFIFP ----------------------------1------------------------------- PSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTL --------------2--------------------------------------------- TLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG --------------2------------------ >PROTEIN ALPHA; SWP:P12870; PDB:2Q23A AALTRLSQPGLAFLKCAFAPPDFNTDPGKGIPDRFEGKVVSRKDVLNQSISFTAGQDTFI ---------------1-------------------------------------------- LIAPTPGVAYWSASVPAGTFPTSATTFNPVNYPGFTSMFGTTSTSRSDQVSSFRYASMNV ------------------------------------------------------------ GIYPTSNLMQFAGSITVWKCPVKLSTVQFPVATDPATSSLVHTLVGLDGVLAVGPDNFSE ------------------------------------------------------------ SFIKGVFSQSACNEPDFEFNDILEGIQTLPPANVSLGSTGQPFTMDSGAEATSGVVGWGN ------------------------------------------------------------ MDTIVIRVSAPEGAVNSAILKAWSCIEYRPNPNAMLYQFGHDSPPLDEVALQEYRTVARS ------------------------1----------------------------------- LPVAVIAAQTASMWERVKSIIKSSL ------------------------- >PUTATIVE UNCHARACTERIZED PROTEIN; SWP:Q8KM22; PDB:3D4TA AELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFT ------------1--1-------------------------------------------- PTFVLMAGDVESGRLEGYPGEDFFWPMLARLIGQAEP ------------------------------------- >METHANOL DEHYDROGENASE SUBUNIT 2; SWP:P29898; PDB:1LRWB YDGTNCKAPGNCWEPKPDYPAKVEGSKYDPQHDPAELSKQGESLAVMDARNEWRVWNMKK -----1-----1------------------------------------------------ TGKFEYDVKKIDGYDETKAPPAE ----------------------- >DNA DC->DU-EDITING ENZYME APOBEC-3G; SWP:Q9HC16; PDB:2JYWA DPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVKLNQRRGFLANQAPHKHGFLEGRH ------------------------------------------------------------ AELCFLDVIPFWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIKTARIYDD ------------------------------1--1-------------------------- QGRAQEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGAPFQPWDGLDEHSQDLSGRLRA ------------------------------------------------------------ ILQNQEN ------- >KALLIKREIN-7; SWP:P49862; PDB:2QXGA IIDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHCKMNEYTVHLGSDTLGDRR ------1------------------2---------------2------------------ AQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPSRCEPPGTTCTVSGW ------------------------------------------------------------ GTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSMLCAGIPDS ---------------1----------3-------------3------ >IMC-11F8 FAB HEAVY CHAIN; SWP:NA; PDB:3B2UH QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGKGLEWIGYIYYSGSTD ---------------------1-------------------------------------- YNPSLKSRVTMSVDTSKNQFSLKVNSVTAADTAVYYCARVSIFGVGTFDYWGQGTLVTVS ------------------------------------1----------------------- SASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS ----------------------2------------------------------------- LSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK ------------------2------------------ >VARIABLE LYMPHOCYTE RECEPTOR DIVERSITY REGION; SWP:NA; PDB:3E6JA AACPSQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELY --1---2-1------2-------------------------------------------- LGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRG -------------------------------------------------33--------- IERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECRDIMYLRNWVADHTS ------------------------------------------4-5--------------- IAMRWDGKAVNDPDSAKCAGTNTPVRAVTEASTSPSKCP -----------------4-------------------5- >DEFENSIN, MUTANT DEF-BBB; SWP:Q17027; PDB:2E3EA ATCDLASFSSQWVTPNDSLCAAHCLVKGYRGGYCKNKICHCRDKF --1----------------2---3---------1----2-3---- >PROTEIN (IGG1 ANTIBODY 1696 (constant heavy chain)); SWP:P01869; PDB:1CL7I SMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETV ------1----------------------------------------------------- TCNVAHPASSTKVDKKIVPRDC -1-------------------- >HEMORRHAGIC PROTEIN-RHODOSTOMIN; SWP:P30403; PDB:1Q7JA GKECDCSSPENPCCDAATCKLRPGAQCGEGLCCEQCKFSRAGKICRIAKGDWNDDRCTGQ ---1-2------32----1-------4----54--3--------6-----------5--- SADCPRYH ---6---- >SECRETED CATHEPSIN L 1; SWP:Q7JNQ9; PDB:2O6XA NDDLWHQWKRMYNKEYNGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMT ------------------------------------------------------------ FEEFKAKYLTEMSRASDILSHGVPYEAVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGT ------------------------------------------------1----------- MEGQYMKNERTSISFSEQQLVDCSRPWGNNGCGGGLMENAYQYLKQFGLETESSYPYTAV ----------------------2--------1---------------------------- EGQCRYNKQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVESDFMMYRSGIYQSQ ---2-------------------------------------------------------- TCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLASLP -3------------------------------------------------3--------- MVARFP ------ >B-LYMPHOCYTE ANTIGEN CD20; SWP:P11836; PDB:2OSLP CEPANPSEKNSPSTQYCYSI 1---------------1--- >EGF-LIKE MODULE OF BLOOD COAGULATION FACTOR X; SWP:P00743; PDB:1APOA KDGDQCEGHPCLNQGHCKDGIGDYTCTCAEGFEGKNCEFSTR -----1----2-----1--------2-3--------3----- >CROSSVEINLESS 2; SWP:Q5D734; PDB:3BK3C LITGTEASCENEGEVLHIPNITDNPCISCVCLNQKAECKQEKCAPLAEDCALVVKQTGAC --------1----------------2--3-1------3----4------5---------2 CEKCKG 4--5-- >HYBRID ATRACOTOXIN; SWP:NA; PDB:2H1ZA GSCVPVDQPCSLNTQPCCDDATCTQERNENGHTVYYCRA --1------2------31----2-------------3-- >CHITOOLIGOSACCHARIDE DEACETYLASE; SWP:Q8SU65; PDB:2VYOA EADVPDVCTNSGMIAINFVDGPVRGVTDRILNTLDELGVKATFSFTVNQKAVGNVGQLYR -------1---------------------------------------------------- RAVEEGHNVALRVDPSMDEGYQCLSQDALENNVDREIDTIDGLSGTEIRYAAVPICNGQV ------------------------------------------------------------ NSEMYNILTERGVLPVGYTFCPYDYDDPVGEFESMIEGSDPKHHSFIILMHDGQEADTSR ------------------------------------------------------------ LENMVKIGKDKGYRFVNMDECLQGYK --------------------1----- >COVALITOXIN-I; SWP:NA; PDB:1V5AA RCLPSGKACAGVTQKIPCCGSCVRGKCS -1------2--------31--2----3- >HAEMADIN; SWP:Q25163; PDB:1E0FI IRFGMGKVPCPDGEVGYTCDCGEKICLYGQSCNDGQCSGDPKPSSEFEEFEIDEEEK ---------1--------1-2----3-----2----3-------------------- >FICOLIN-2; SWP:Q15485; PDB:2J0GA GPRTCKDLLDRGHFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWA ----1---------------------------1--------------------------- TYKQGFGSRLGEFWLGNDNIHALTAQGTSELRTDLVDFEDNYQFAKYRSFKVADEAEKYN ------------------------------------------------------------ LVLGAFVEGSAGDSLTFHNNQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHTSNLNGRYL ------------------------------------2------------2---------- RGTHGSFANGINWKSGKGYNYSYKVSEMKVRP -------------------------------- >TRYPTASE INHIBITOR; SWP:Q1EG59; PDB:2UUXA AAECTVPIGWSEPVKGLCKARFTRYYCMGNCCKVYEGCYTGGYSRMGECARNCPG ---1-------------2--------3---14-----2----------4---3-- >fusion protein of CRFR1 extracellular domain and MBP; SWP:P34998; PDB:3EHSA NAASGRQTVDEALKDAQTNAAAEFSLQDQHCESLSLASNISGLQCNASVDLIGTCWPRSP -------------------------------1-------------2---------3---- AGQLVVRPCPAFFYGVRYNTTNNGYRECLANGSWAARVNYSECQEILNE ---------4------------------5--------------6----- >LATROPHILIN 1; SWP:Q5U4D5; PDB:2JX9A GLPFGLMRRELACEGYPIELRCPGSDVIMVENANYGRTDDKICDADPFQMENVQCYLPDA ------------1--------2--------------------1-----------3----- FKIMSQRCNNRTQCVVVAGSDAFPDPCPGTYKYLEVQYDCVPYKVE -------4-----4------------3------------2------ >PROBABLE THIOL PEROXIDASE; SWP:P80864; PDB:2JSYA MAEITFKGGPVTLVGQEVKVGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVC -----------------------------------------------------------1 DAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVY ---------------------------------1-------------------------- IKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALVK ----------------------------------------------- >INSULIN-LIKE GROWTH FACTOR-BINDING PROTEIN 6; SWP:NA; PDB:2JM2A ALARCPGCGQGVQAGCPGGCVEEEDGGSPAEGCAEAEGCLRREGQ ----1--1-------2---2------------3-----3------ >DISINTEGRIN ACOSTATIN ALPHA; SWP:Q805F7; PDB:3C05A NPCCDAATCKLTPGSQCAEGLCCDQCKFIKAGKICRRARGDNPDYRCTGQSGDCPRKHF --1-------------2----32--1--------4-----------3------4----- >TERTIAPIN; SWP:P56587; PDB:1TERA ALCNCNRIIIPHMCWKKCGKK --1-2--------1---2--- >LOW-DENSITY LIPOPROTEIN RECEPTOR; SWP:P01130; PDB:1AJJA PCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCA -1------2----1------3-----2--------3- >PHOSPHOLIPASE A2 CB2; SWP:P24027; PDB:2QOGA SLLQFNKMIKFETRKNAVPFYAFYGCYCGWGGQGRPKDATDRCCFVHDCCYGKLAKCNTK -------------------------1-2--------------32----45------6--- WDIYRYSLKSGYITCGKGTWCKEQICECDRVAAECLRRSLSTYKNEYMFYPDSRCREPSE --------------7-----6----7-5------3-------------------1----- TC -4 >NOVEL IMMUNE-TYPE RECEPTOR 11; SWP:Q8UWK4; PDB:2QQQA IKELHVKTVKRGENVTMECSMSKVTNKNNLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGF ------------------1----------------------------------------- KDSRFSMTVNDQKFDLNIIGAREDDGGEYFCGEVEGIIIKFTSGTRLQF ------------------------------1------------------ >TRYPSIN INHIBITOR II; SWP:P82409; PDB:1HA9A SGSDGGVCPKILKKCRRDSDCPGACICRGNGYCG -------1------2-----3---1-2-----3- >PROTEIN (API); SWP:Q40378; PDB:1CE3A MKACTLNCDPRIAYGVCPRSEEKKNDRICTNCCAGTKGCKYFSDDGTFVCEGES ---1---2--------3-----------2--41-----3----------4---- >ARENICIN-2; SWP:Q5SC59; PDB:2JNIA RWCVYAYVRIRGVLVRYRRCW --1----------------1- >CYSTATIN C; SWP:P01034; PDB:1G96A VGGPMDASVEEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELG ------------------------------------------------------------ RTTCTKTQPNLDNCPFHDQPHLKRKAFCSFQIYAVPWQGTMTLSKSTCQDA ---1---------1-------------2-------------------2--- >BACTERIOCIN CURVACIN A; SWP:P0A311; PDB:2A2BA ARSYGNGVYCNNKKCWVNRGEATQSIIGGMISGWASGLAGM ---------1----1-------------------------- >NEUROPILIN-2; SWP:O60462; PDB:2QQJA QCNVPLGMESGRIANEQISASSTYSDGRWTPQQSRLHGDDNGWTPNLDSNKEYLQVDLRF -1---------------------------------------------------------- LTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVL ------------------------------------------------------------ NKLHAPLLTRFVRIRPQTWHSGIALRLELFGCRVTDAPCSNMLGMLSGLIADSQISASST -------------------------------1------2--------------------- QELWSPSAARLVSSRSGWFPRIPQAQPGEEWLQVDLGTPKTVKGVIIQGARGGAVEARAF ------------------------------------------------------------ VRKFKVSYSLNGKDWEYIQDPRTQQPKLFEGNMHYDTPDIRRFDPIPAQYVRVYPERWSP ------------------------------------------------------------ AGIGMRLEVLGCDWT -----------2--- >PULLULANASE; SWP:NA; PDB:2FGZA DVVVRLPDDAFRAAFGVALADAHWVDKTTLLWPGGENKPIVRLYYSHSSKVAADSNGEFS ------------------------------------------------------------ DKYVKLTPTTVNQQVSMRFPHLASYPAFKLPDDVNVDELLQGETVAIAAESDGILSSATQ ------------------------------------------------------------ VQTAGVLDDTYAAAAEALSYGAQLTDSGVTFRVWAPTAQQVELVIYSADKKVIASHPMTR ------------------------------------------------------------ DSASGAWSWQGGSDLKGAFYRYAMTVYHPQSRKVEQYEVTDPYAHSLSTNSEYSQVVDLN ------------------------------------------------------------ DSALKPEGWDGLTMPHAQKTKADLAKMTIHESHIRDLSAWDQTVPAELRGKYLALTAQES ------------------------------------------------------------ NMVQHLKQLSASGVTHIELLPVFDLATVNEFSDKVADIQQPFSRLCEVNSAVKSSEFAGY ---------------------------------------------1-------------- CDSGSTVEEVLTQLKQNDSKDNPQVQALNTLVAQTDSYNWGYDPFHYTVPEGSYATDPEG 1----------------------------------------------------------- TARIKEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTGS ------------------------------------------------------------ VESATCCSDSAPEHRMFAKLIADSLAVWTTDYKIDGFRFDLMLYHPKAQILSAWERIKAL -----22----------------------------------------------------- NPDIYFFGEGWDSNQSDRFEIASQINLKGTGIGTFSDRLRDAVRGGGPFDSGDALRQNQG ------------------------------------------------------------ VGSGAGVLPNELTTLSDDQARHLADLTRLGMAGNLADFVLIDKDGAVKRGSEIDYNGAPG ------------------------------------------------------------ GYAADPTEVVNYVSKHDNQTLWDMISYKAAQEADLDTRVRMQAVSLATVMLGQGIAFDQQ ------------------------------------------------------------ GSELLRSKSFTRDSYDSGDWFNRVDYSLQDNNYNVGMPRSSDDGSNYDIIARVKDAVATP ------------------------------------------------------------ GETELKQMTAFYQELTALRKSSPLFTLGDGATVMKRVDFRNTGADQQTGLLVMTIDDGMQ ------------------------------------------------------------ AGASLDSRVDGIVVAINAAPESRTLQDFAGTSLQLSAIQQAAGDRSLASGVQVAADGSVT ------------------------------------------------------------ LPAWSVAVLELPQGESQGAGLPVSSK -------------------------- >MU-CONOTOXIN SMIIIA; SWP:NA; PDB:1Q2JA RCCNGRRGCSSRWCRDHSRCC -12-----3----1-----23 >ANTI-CIGUATOXIN ANTIBODY, LIGHT CHAIN; SWP:NA; PDB:2E27L IQMTQSPSSLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSR ---------------------1-------------------------------------- FSGSGSGRDYSFSISNLEPEDAATYYCLQYDNFTWTFGGGTKLEIKR --------------------------1-------------------- >INSULIN; SWP:P01308; PDB:1XW7A GILEQCCTSICSLYQLENYCN -----1----1---------- >RNA POLYMERASE-ASSOCIATED PROTEIN RAPA; SWP:P60240; PDB:3DMQA PFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVFNPGDTIT ------------------------------------------------------------ SHDGWQQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRD ------------------------------------------------------------ RFALRYRARKYSSEQFRPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTI ------------------------------------------------------------ EAGILHQQLLSGAAERVLIIVPETLQHQWLVELRRFNLRFALFDDERYAEAQHDAYNPFD ------------------------------------------------------------ TEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVP ------------------------------------------------------------ GVLLLTATPEQLGESHFARLRLLDPNRFHDFAQFVEEQKNYCPVADAVALLAGNKLSNDE ------------------------------------------------------------ LNLGEIGEQDIEPLLQAANSDSEDAQSARQELVSLDRHGTSRVLFRNTRNGVKGFPKREL ------------------------------------------------------------ HTIKLPLPTQYQTAIKVSGIGARKSAEDRARDLYPERIYQEFEGDNATWWNFDPRVEWLG ------------------------------------------------------------ YLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGSIIERDRAAAWFAEEDTGA -------------1---------------------------------------------- QVLLCSEIGSEGRNFQFASHVFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQS ----1------------------------------------------------------- VLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKA ------------------------------------------------------------ QLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFANLFDIIGINQDDRGDNIVLT ------------------------------------------------------------ PSDHLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTIS ------------------------------------------------------------ LLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRLLDKNGNNLAAQVEFETFNR ------------------------------------------------------------ QLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEA ------------------------------------------------------------ LRAVNPNIRDDELTAIESNRQQVESLDQAGWRLDALRL -------------------------------------- >DNA-DIRECTED RNA POLYMERASE SUBUNIT A; SWP:Q980R2; PDB:2PMZA KNIKGIKFGILSPDEIRKMSVTAIITPMDPRLGVIEPGQKCPTCGNTLGNCPGHFGHIEL ----------------------------------------1---------1--------- VRPVIHVGLVKHIYEFLKAKLTPSDIRERLEKIPDSDVEILGYDPTTSRPEWMILTVLPV ------------------------------------------------------------ PPITIRPSEDDLTHKLVDIVRINERLKESIDAGAPQLIIEDLWDLLQYHVATYFDNEIPG ------------------------------------------------------------ LPPSKHRSGRPLRTLAQRLKGKEGRFRGNLSGKRVDFSSRTVISPDPNISIDEVGVPEII ------------------------------------------------------------ AKTLTVPERITPWNIEKLRQFVINGPDKWPGANYVIRPDGRRIDLRYVKDRKELASTLAP ------------------------------------------------------------ GYIIERHLIDGDIVLFNRQPSLHRISMMAHRVRVLKGLTFRLNLLVCPPYNADFDGDEMN ------------------------------------------------------------ LHVPQSEEAIAEAKEIMLVHKNIITPRYGGPIIGAAQDYISGAYLLTVKTTLLTKEEAQQ ------------------------------------------------------------ ILGVADVKIDLGEPAILAPREYYTGKQVISAFLPKDFNFHGQANVSSGPRLCKNEDCPHD ------------------------------------------------------------ SYVVIKNGILLEGVFDKKAIGNQQPESILHWLIKEYSDEYGKWLMDNLFRVFIRFVELQG ------------------------------------------------------------ FTMRLEDVSLGDDVKKEIYNEIDRAKVEVDNLIQKYKNGELEPIPGRTLEESLENYILDT ------------------------------------------------------------ LDKLRSTAGDIASKYLDPFNFAYVMARTGARGSVLNITQMAAMLGQQSVRGERIKRGYMT ------------------------------------------------------------ RTLPHFKPYDISPEARGFIYSSFRTGLKPTELFFHAAGGREGLVDTAVRTSQSGYMQRRL ------------------------------------------------------------ INALSDLRAEYDGTVRSLYGEVVQVAYGDDGVFPMYSAHGKTVDVNRIFERVVGWK -------------------------------------------------------- >ALPHA-A-CONOTOXIN EIVA; SWP:P58782; PDB:1PQRA GCCGPYNAACHCGCKVGRYCDRSGG -12------2-3-1-----3----- >PRION PROTEIN; SWP:P04156; PDB:1E1GA LGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPVDEYSNQNNFVHDCVNITI ------------------------------------------------------1----- KQHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQR -----------------------------1-------------- >STROMAL CELL-DERIVED FACTOR 1; SWP:P48061; PDB:2K01A KPVSLSYRCPCRFFESHVARANVKHLKILNTPNCACQIVARLKNNNRQVCIDPKLKWIQE --------1-2----------------------1---------------2---------- YLEKCLNK -------- >Myeloid differentiation primary response protein MyD88; SWP:Q99836; PDB:2JS7A MGITTLDDPLGHMPERFDAFICYCPSDIQFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCV -----------------------------------------------1------------ WSIASELIEKRCRRMVVVVSDDYLQSKECDFQTKFALSLSPGAHQKRLIPIKYKAMKKEF -----------1------------------------------------------------ PSILRFITVCDYTNPCTKSWFWTRLAKALSLPLEHHHHHH ---------------------------------------- >COAGULATION FACTOR IX; SWP:P00740; PDB:1CFHA YNSGKLEEFVQGNLERECMEEKCSFEEAREVFENTERTTEFWKQYVD -----------------1----1------------------------ >BETA-DEFENSIN 1; SWP:P60022; PDB:2PLZA DHYNCVSSGGQCLYSACPIFTRIQGTCYRGRARCCR ----1------2----3---------2------13- >PROTEIN (V3 LOOP OF HIV-1 ENVELOPE PROTEIN); SWP:P20871; PDB:1CE4A CTRPNNNTRKSIHIGPGRAFYTTGEIIGDIRQAHC 1---------------------------------1 >PROLYL-4 HYDROXYLASE; SWP:NA; PDB:2JIGA EEWRGEVVHLSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTS ------------------------------------------------------------ TGTWFAKGEDSVISKIEKRVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGP ------------------------------------------------------------ EHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYSL ---------------------------------------1-------------------- KPDGSNDPASLHGSCPTLKGDKWSATKWIHVAPIGG --------------1--------------------- >TRYPSIN INHIBITOR A; SWP:P10295; PDB:1F2SI RICPRIWMECKRDSDCMAECICVMGHCG --1------2-----3---1-2----3- >FAB LIGHT CHAIN; SWP:NA; PDB:3CLEL DIVMTQSQKFMSTSVGDRVSISCKASQNVGNIIAWYQQKPGQSPKALIYLASYRYSGVPD ----------------------1------------------------------------- RFTGSGSGTDFTLTISNVQSEDLAEYFCQQYSSFPLTFGAGTKLELKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRN -------------2------------------ >NEMATOCYST OUTER WALL ANTIGEN; SWP:Q8IT70; PDB:2NX6A GSSSCPQFPSCSPSCAPQCSQQCCQQP ----1-----2---3---1---32--- >PROTEIN (RANTES); SWP:P13501; PDB:1B3AA PYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREY --------12----------------------1---------------2----------- INSLEMS ------- >PROTEIN (ALPHA-LYTIC PROTEASE); SWP:P00778; PDB:1BOQA ANIVGGIEYSINNASLCSVGFSVTRGATKGFVTAGHCGTVNATARIGGAVVGTFAARVFP ----------------1-------------------1----------------------- GNDRAWVSLTSAQTLLPRVANGSSFVTVRGSTEAAVGAAVCRSGRTTGYQCGTITAKNIT ----------------------------------------2---------2--------- ANYAEGAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQSNGNNCGIPASQRSSL ----------------3--------------------------------3---------- FERLQPILSQYGLSLVTG ------------------ >MONOCLONAL ANTIBODY; SWP:NA; PDB:2V7HB QAQLQQSGAELMKPGASVKISCKATGYTFSNYWIDWIKQRPGHGLEWIGEILPGSGSTNY ---------------------1-------------------------------------- NEKFRGKATFTADTSSNTAYMQLSSLTSEDSAVYYCTRRGYWAYDFDYWGQGTTLTVSSA -----------------------------------1------------------------ KTTPPSVYPLAPGSASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLS ---------------------2-------------------------------------- SSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRD ----------------2------------------- >RADICAL SAM ENZYME; SWP:O59412; PDB:2YX0A KITVQANPNMPKEVAELFRKQHYEIVGRHSGVKLCHWLKKSLTEGRFCYKQKFYGIHSHR ------------------------------------------------------------ CLQMTPVLAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKPKVD --------------1--1------------------------------------------ KKKFEEAWNPTHAAISLSGEPMLYPYMGDLVEEFHKRGFTTFIVTNGTIPERLEEMIKED ------------------------------------------------------------ KLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRFLELMRDLPTRTVVRLTLVKGENMH ------------------------------------------------------------ SPEKYAKLILKARPMFVEAKAYMNRLTINNMPSHQDIREFAEALVKHLPGYHIEDEYEPS ------------------------------------------------------------ RVVLIMRDDVDPQGTGVEGRFIKH ------------------------ >Relaxin 3 (Prorelaxin H3) (Insulin-like peptide INSL7) (Insulin-like peptide 7); SWP:Q8WXF3; PDB:2FHWA DVLAGLSSSCCKWGCSKSEISSLC ---------1----1--------- >Major allergen I polypeptide, fused chain 2, chain 1; SWP:P30440; PDB:1PUOA ETCPIFYDVFFAVANGNELLLDLSLTKVNATEPERTAMKKIQDCYVENGLISRVLDGLVM --1----------------------------------------2---------------- TTISSSKDCEICPAVKRDVDLFLTGTPDEYVEQVAQYKALPVVLENARILKNCVDAKMTE --------3--3----------------------------------------2------- EDKENALSLLDKIYTSPLCLE ------------------1-- >METHANOL DEHYDROGENASE SMALL SUBUNIT; SWP:Q4AE23; PDB:2D0VB YDGTHCKAPGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQVESRKGEEERNANRAEHFKK -----1-----1------------------------------------------------ TGKWVYDVKK ---------- >Neutrophil defensin 1 (HNP-1) (HP-1) (HP1) (Defensin, alpha 1); SWP:P59665; PDB:2PM4A DCYCRIPACIAGEKKYGTCIYQGKLWAFCC -1-2----3---------2---------31 >SARAFOTOXINS PRECURSOR; SWP:P13208; PDB:1SRBA CSCKDMTDKECLYFCHQDVIW 1-2-------2---1------ >LIPASE A; SWP:NA; PDB:2VEOA AALPNPYDDPFYTTPSNIGTFAKGQVIQSRKVPTDIGNANNAASFQLQYRTTNTQNEAVA ------------------------------------------------------------ DVATVWIPAKPASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWA ------------------------------1----------------------------- LQQGYYVVSSDHEGFKAAFIAGYEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHAT ------------------------------------------------------------ VWATSLADSYAPELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMES ------------------------------------------------------------ FIEARLNAKGQQTLKQIRGRGFCLPQVVLTYPFLNVFSLVNDTNLLNEAPIAGILKQETV ----------------------1------------------------------------- VQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAE ---------------------------------------2-------------------- IFGLVPSLWFIKQAFDGTTPKVICGTPIPAIAGITTPSADQVLGSDLANQLRSLNGKQSA -----------------------2------------------------------------ FGKPFGPITP ---------- >LECTIN-RELATED NK CELL RECEPTOR LY49G1; SWP:Q9JHV6; PDB:3CADA EKYWFCYGIKCYYFDMDRKTWSGCKQTCQISSLSLLKIDNEDELKFLQNLAPSDISWIGF -----1----1------------2---3-------------------------------- SYDNKKKDWAWIDNGPSKLALNTTKYNIRDGLCMSLSKTRLDNGDCGKSYICICGKRLDK --------------------------------4------------4-----2-3------ FPH --- >MYELOID PROGENITOR INHIBITORY FACTOR-1; SWP:P55773; PDB:1G91A MDRFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ ----------12---------3------------1---------------2--------- VCMRMLKLDTRIKTRKN -3--------------- >PIRIN-LIKE PROTEIN YHAK; SWP:P42624; PDB:2VECA ARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYPKVDILN ---1-------------------------------------------------------- VILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDAPQREN ------------------------------------------------------------ PLIQKLALNMGKQQLIASPEGAMGSLQLRQQVWLHHIVLDKGESANFQLHGPRAYLQSIH ------------------------------------------------------------ GKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV ----------------1----------------------------- >TRYPSIN INHIBITOR A; SWP:P30709; PDB:1MCTI RICPRIWMECTRDSDCMAKCICVAGHCG --1------2-----3---1-2----3- >BONE MORPHOGENETIC PROTEIN RECEPTOR TYPE IA; SWP:P36894; PDB:2QJBC TLPFLKCYCSHHCPEDAINNTCITNGHCFTMIEEDDQGETTLTSGCLGLEGSDFQCRDTP ------1-2---2--------3-----1-----------------3---------4---- IPHQRRSIECCRTNLCNQYLQPTLP ---------45----5--------- >ENVELOPE PROTEIN; SWP:Q9J7C6; PDB:3EGPA MSYVMCTGSFKLEKEVAETQHGTVLVQVKYEGTDAPCKIPFSTQDEKGATQNGRLITANP -----1------------------------------1----------------------- IVTDKEKPVNIEAEPPFGESYIVVGAGEKALKLSWFKKGSSI ------------------------------------------ >PROTEIN (VIRAL MACROPHAGE INFLAMMATORY PROTEIN-II); SWP:Q98157; PDB:1CM9A SWHRPDKCCLGYQKRPLPQVLLSSWYPTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLQ -------12----------------------1---------------2------------ QLPVTAR ------- >NEUROLIGIN-2; SWP:Q69ZK9; PDB:3BL8A QKPVVNTAYGRVRGVRRELNNEILGPVVQFLGVPYATPPLGARRFQPPEAPASWPGVRNA ------------------------------------------------------------ TTLPPACPQNLHGALPAIMLPVWFTDNLEAAATYVQNQSEDCLYLNLYVPTEDGPLTKKD ------1----------------------------------1------------------ SGKKPVMLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTLNYRLGVLGFLSTGDQAAKGNY ------------------------------------------------------------ GLLDQIQALRWLSENIAHFGGDPERITIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGT ------------------------------------------------------------ AISSWSVNYQPLKYTRLLAAKVGCDREDSTEAVECLRRKSSRELVDQDVQPARYHIAFGP -----------------------2----------2------------------------- VVDGDVVPDDPEILMQQGEFLNYDMLIGVNQGEGLKFVEDSAESEDGVSASAFDFTVSNF ------------------------------------------------------------ VDNLYGYPEGKDVLRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAD ------------------------------------------------------------ YQSPVYFYTFYHHCQAEGRPEWADAAHGDELPYVFGVPMVGATDLFPCNFSKNDVMLSAV -------------3---------------------------------3------------ VMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWSKFNSKEKQYLHIGLKPRVRDNY ------------------------------------------------------------ RANKVAFWLELVPHLH ---------------- >HAINANTOXIN-3; SWP:P83464; PDB:2JTBA GCKGFGDSCTPGKNECCPNYACSSKHKWCKVYL -1------2------31----2------3---- >PSEUDOPILIN GSPK; SWP:A7ZRI8; PDB:3CI0K GRTRSQQEYQQALWYSASAESLALSALSLSLKNEKRVHLEQPWASGPRFFPLPQGQIAVT ------------------------------------------------------------ LRDAQACFNLNALAQPTTASRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQ ------1----------------------------------------------------- TRLGREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMTRQQINI ------------------------------------------------1----------- NTLDVTQSVILEALFDARALLQQRPAKGWEDVDQFLAQPLLADVDERTKKQLKTVLSVDS ------------------------------------------------------------ NYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQTGES ---------------------------------------- >Fab heavy chain; SWP:NA; PDB:2R8SH EVQLVESGGGLVQPGGSLRLSCAASGFNLYSSSIHWVRQAPGKGLEWVAYISSSYGYTYY ---------------------1-------------------------------------- ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRAAGMSTYGFDYWGQGTLVTVS -----------------------------------1------------------------ SASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS ----------------------2------------------------------------- LSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC ------------------2-------------------- >SINGLE-CHAIN ANTIBODY FRAGMENT; SWP:P01751; PDB:1NQBA VQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYN --------------------1--------------------------------------- EKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSD ----------------------------------1------------------------- IELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFS ---------------------2-------------------------------------- GVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR -------------------------------2-------------------- >HEPCIDIN; SWP:P82951; PDB:1S6WA GCRFCCNCCPNMSGCGVCCRF -1--23-44-----3--21-- >HUWENTOXIN-X; SWP:P68424; PDB:1Y29A KCLPPGKPCYGATQKIPCCGVCSHNKCT -1------2--------31--2----3- >CARBOXYPEPTIDASE B2; SWP:Q2KIG3; PDB:3D4UA SYYEQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKNAMWIDCGIHA -------------------------------------------------------1---- REWISPAFCLWFVGSVTYYYGKNLLKHMDFYIMPVVNVDGYDYTWKKDRMWRKNRSLHEK --------1--------------------------------------------------- NACVGTDLNRNFASKH ---------------- >DEFENSIN, MUTANT DEF-ABB; SWP:Q17027; PDB:2NY9X ATCDLASGFGVGSSLCAAHCLVKGYRGGYCKNKICHCRDKF --1------------2---3---------1----2-3---- >FIBRILLIN; SWP:P35555; PDB:1APJA SAQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWGDPCELCPTEPDEAFRQIC ---------1--------2------------134----------2--3-----------4 PYGSGIIVGPDDSA -------------- >CONNECTIVE TISSUE ACTIVATING PEPTIDE-III; SWP:P02775; PDB:1F9PA NLAKGKEESLDSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRK -------------------1-2-----------------------1-------------- ICLDPDAPRIKKIVQKKLAGD -2------------------- >LACTOFERRIN; SWP:Q29477; PDB:1JW1A APRKNVRWCAISLPEWSKCYQWQRRMRKLGAPSITCVRRTSVLECIRAIAGKNADAVTLD --------1---------2----------------2--------1--------------- DGMVFEAGRDPYKLRPVAAEIYGTEKSPQTHYYAVAVVKKGSNFKLDQLQGQKSCHMGLG ------------------------------------------------------3----- RSAGWNIPVGILRPPLSWTESAEPLQGAVARFFSASCVPCVDGKAYPNLCQLCKGVGENK ------------------------------------4--5---------6--4------- CACSSQEPYFGYSGAFKCLQDGAGDVAFVKETTVFENLPEKADRDQYELLCLNNTRAPVD 6-5--------------3--------------------------------7--------- AFKECHLAQVPSHAVVARSVDGKENLIWELLRKAQEKFGKNKSQRFQLFGSPEGRRDLLF ----7------------------------------------------------------- KDSALGFLRIPSKVDSALYLGSRYLTALKNLRETAEEVKARCTRVVWCAVGPEEQSKCQQ -----------------------------------------------8---------9-- WSEQSGQNVTCATASTTDDCIALVLKGEADALSLDGGYIYTAGKCGLVPVMAENRKSSKH ----------9--------8------------------------a--------------- SSLDCVLRPTEGYLAVAVVKKANEGLTWNSLKGKKSCHTAVDRTAGWNIPMGLIANQTGS ----b-------------------------------c----------------------- CAFDEFFSQSCAPGADPKSSLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDV d---------e----------f--e---------f----------------c-------- AFVKNDTVWENTNGESSADWAKNLNREDFRLLCLDGTTKPVTEAQSCYLAVAPNHAVVSR --------------------------------g-------------g------------- SDRAAHVEQVLLHQQALFGKNGKNCPDKFCLFKSETKNLLFNDNTECLAKLGGRPTYEKY ------------------------h----h----------------b------------- LGTEYVTAIANLKKCSTSPLLEACAFLTR --------------d--------a----- >GLIAL CELL LINE-DERIVED NEUROTROPHIC FACTOR; SWP:P39905; PDB:2V5EB QRGKNRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTYDKILKNLSRNRRLV -------1--------------------------2---3--------------------- SDKVGQACCRPIAFDDDLSFLDDNLVYHILRKHSAKRCGCI --------1----------------------------2-3- >INSULIN A; SWP:P01308; PDB:1J73A GIVEQCCSICSLYQLENYCN -----1---1---------- >CIIC1 ANTICOLLAGEN FAB; SWP:NA; PDB:2VL5A QVQLQQPGADLVRPGVSVKLSCKASGYTFTSYWMNWVKQRPGQGLEWIGMIHPSDSETRL ---------------------1-------------------------------------- SQKFKDKATLTVDKSSSTAYMQLSSPTSEDSAVYYCARLKPGGTWFAYWGQGTLVTVSAA -----------------------------------1------------------------ KTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDL -------------------------2---------------------------------- YTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP --------------------2----------------- >INFLUENZA B HEMAGGLUTININ (HA); SWP:Q84097; PDB:2RFTB GFFGAIAGFLEGGWEGMIAGWHGYTSHGAHGVAVAADLKSTQEAINKITKNLNSLSELEV ------------------------------------------------------------ KNLQRLSGAMDELHNEILELDEKVDDLRADTISSQIELAVLLSNEGIINSEDEHLLALER ------------------------------------------------------------ KLKKMLGPSAVDIGNGCFETKHKCNQTCLDRIAAGTFNAGEFSLPTFDS -----------------------1---1--------------------- >HALOTOLERANCE PROTEIN HAL3; SWP:Q9SWE5; PDB:1E20A RKPRVLLAASGSVAAIKFGNLCHCFTEWAEVRAVVTKSSLHFLDKLSLPQEVTLYTDEDE ------------------------------------------------------------ WSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFV ----------------------------------------1-----1------------- APAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYGNGAMAEPSLIYSTVRLFW ------------------------------------------------------------ ESQAH ----- >PUTATIVE ACETYLTRANSFERASE TA0821; SWP:Q9HJZ0; PDB:3C26A IVFDRGSPSDIDEIKTFTSNTWKVGYYTDLYSKLADTGTDDYVDKVIERWVNDGSVYVLR ------------------------------------------------------------ VSGRPVATIHEKLPDGSVLGGLRVHPEYRGSRLGSIQETIQFLRGKTERLRSAVYSWNEP ------------------------------------------------------------ SLRLVHRLGFHQVEEYPIYTFQGGSALKPVNERYAGRWRCFFIDWKYCSDDPDIIHEEYS ---------------------------------------1-------1------------ NNLIVDGSTFVYFDIYEGGIDLFVNDSDDASSFIEKYRSNGRITFYVRKALANGLPYVPA ------------------------------------------------------------ SSLTVWEYRY ---------- >HEMAGGLUTININ; SWP:NA; PDB:1RD8B GLFGAIAGFIEGGWTGMIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMN ------------------------------------------------------------ TQFTAVGKEFNNLERRIENLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVRNLYE ------------------------------------------------------------ KVKSQLKNNAKEIGNGCFEFYHKCDDACMESVRNGTYDYPKYSEESKLNREEIDG -----------------------1---1--------------------------- >COMPLEMENT C1R COMPONENT; SWP:P00736; PDB:1GPZA IKCPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHR --1----------------------------2-------------------1-------- AMPRCKIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTEQGVYTCTAQG ----2----3-----------------------------4---------------3---- IWKNEQKGEKIPRCLPVCGKPVNPVEQRQQIIGGQKAKMGNFPWQVFTNIHGRGGGALLG -------------4---5------------------------------------------ DRWILTAAHTLYPKEHASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDI ------------------------------------------------------------ ALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGIAHDLRFVRLPVANPQACENS ------------------5-------------------------------------6--- QNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYV ----6----------7-----------------------------7-------------- DWIKKEME -------- >CONSERVED PROTEIN O27018; SWP:O27018; PDB:3BEYA RFLEELPEVAESFKNFREAVRSEGKLTEREKLLISVACSVAVRCDACTRRHAEEALEAGI -------------------------------------------1--1------------- TEGELAEAAAVAALIRAGSANTASAIFR ---------------------------- >BOWMAN-BIRK TYPE TRYPSIN INHIBITOR; SWP:P01062; PDB:1G9II EPCCDSCRCTKSIPPQCHCANI --12--1-3-------3-2--- >CHIR AB1; SWP:Q5ZJ90; PDB:2VSDA LPQPSLSLHPSQGVSLGDTVTLRCHLPRMAAWVQLWLNGTLRFDKEKDKEQDAAEFSFAV -----------------------1------------------------------------ TNLEDAGTYQCRYQVSEPLWTSNQSDPVELVLT ----------1---------------------- >HEMAGGLUTININ-NEURAMINIDASE; SWP:O89343; PDB:2VSKA ICLQKTTSTILKPRLISEGVCITDPLLAVDNGFFAYSHLEKIGSCTRGIAKQRIIGVGEV -1------------------2-----------------------2--------------- LDRGDKVPSMFMTNVWTPPNPSTIHHCSSTYHEDFYYTLCAVSHVGDPILNSTSWTESLS --------------------------3------------3-------------------- LIRLAVRPDYNQKYIAITKVERGKYDKVMPYGPSGIKQGDTLYFPAVGFLPRTEFQYNDS ------------------------------------------------------------ NCPIIHCKYSKAENCRLSMGVNSKSHYILRSGLLKYNLSLIILQFIEIADNRLTIGSPSK -4----5-------4--------------------------------------------- IYNSLGQPVFYQASYSWDTMIKLGDVDTVDPLRVQWRNNSVISRPGQSQCPRFNVCPEVC -------------------------------------------------6-----5---6 WEGTYNDAFLIDRLNWVSAGVYLNSNQTAENPVFAVFKDNEILYQVPLAEDDTNAQKTIT ------------------------------------------------------------ DCFLLENVIWCISLVEIYDTGDSVIRPKLFAVKIPAQCSE -7--------7--------------------------1-- >CYSTEINE-RICH SECRETORY PROTEIN-2; SWP:P16563; PDB:2A05A GSCASCPNNCENGLCTNSCDFEDLLSNCESLKTSAGCKHELLKTKCQATCLCEDKIH --1--2---1----2---3--------4--------5--------4---5-3----- >BONE MORPHOGENETIC PROTEIN 6; SWP:P22004; PDB:2QCWA TACRKHELYVSFQDLGWQDWIIAPKGYAANYCDGECSFPLNAHMNATNHAIVQTLVHLMN --1----------------------------2---3------------------------ PEYVPKPCCAPTKLNAISVLYFDDNSNVILKKYRNMVVRACGCH --------1-------------------------------2-3- >REPRESSOR PROTEIN CI101-229DM-K192A; SWP:Q7B004; PDB:2HNFA GSHMYEYPVFSHVQAGMFSPELRTFTKGDAERWVSTTKKASDSAFWLEVEGNSMTTPKTS ------------------------------------------------------------ FPDGMLILVDPEQAVEPGDFCIARLGGDEFTFAKLIRDSGQVFLQPLNPQYPMIPCNESC -------------------------------------------------------1---1 SVVGKVIASQ ---------- >IGE FAB FRAGMENT, LIGHT CHAIN; SWP:NA; PDB:2R56L DIVMTQSPSSLSASVGDRVTITCRASQGISSRLAWYQQKPGKAPKLLIYAASSLQSGVPS ----------------------1------------------------------------- RFSGSGSGTEFTLTISSLQPEDFATYYCQQYHSYPWTFGQGTKLEIKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNR -------------2----------------- >HEVEIN; SWP:P02877; PDB:1HEVA EQCGRQAGGKLCPNNLCCSQWGWCGSTDEYCSPDHNCQSNCKD --1--------2----31-----2------3-----4---4-- >CIRCULARLY PERMUTED (1-3,1-4)-BETA-D-GLUCAN 4-GLUCANOHYDROLASE CPA16M-127; SWP:P23904; PDB:1AJOA GHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMMNLWNGTG ------------------------------------------------------------ VDDWLGSYNGANPLYAEYDWVKYTSNQTGGSFFEPFNSYNSGTWEKADGYSNGGVFNCTW ---------------------------------------------------------1-- RANNVNFTNDGKLKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTY --------------------------1--------------------------------- TGPAHGTQWDEIDIEFLGKDTTKVQFNYYTNG -------------------------------- >LEIUROTOXIN; SWP:NA; PDB:2DDLA AFCNLRMCQLSCRKSLGCLLGKCIGDKCKCYGC --1----2---3-----4----1----2-3--4 >ATRIAL NATRIURETIC FACTOR; SWP:P01160; PDB:1YK0E SCFGGRMDRIGAQSGLGCNSF -1---------------1--- >CERVICAL EMMPRIN; SWP:Q54A51; PDB:3B5HA AGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQW ------------------1----------------------------------------- GEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKI ----1--------------------------------------2---------------- TDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV ------------------------------------------2----------------- R - >PUTATIVE FIMBRIAL BIOGENESIS AND TWITCHING MOTILITY PROTEIN; SWP:Q9JZ41; PDB:2VQ2A ANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQE ------------------------------------------------------------ SFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICS -----------------------1----------------------------------1- AKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQAD ------------------------------------------------------------ DLLLGWKIAKALGNAQAAYEYEAQLQANFPYSEELQTVLT ---------------------------------------- >SUSHI DOMAIN CONTAINING 2; SWP:Q9DBX3; PDB:2CQWA GSSGSSGIPGPGFTAGAQGSCSLRCGAQDGLCSCHPTCSGLGTCCEDFLDYCLEILPSSG --------------------1---2------3-1---4-----43------2-------- SMMGGKDFVVQHLKWTDPSGPSSG ------------------------ >PROTEIN B15; SWP:P24772; PDB:2VVYA HVFSPQHCGCDRLTSIDDVRQCLTEYIYWSSYAYRNRQCAGQLYSTLLSFRDDAELVFID -------1------------------------------1--------------------- IRELVKNPWDDVKDCAEIIRCYIPDEQKTIREISAIIGLCAYAATYWGGEDHPTSNSLNA ------------------------------------------------------------ LFVLELNYVDYNIIFRRN ------------------ >MINI-COLLAGEN; SWP:Q00484; PDB:1SOPA PCPPVCVAQCVPTCPQYCCPAKRK -1---2---3---2---13----- >H-2 class II histocompatibility antigen, A beta chain; SWP:P14483; PDB:1LNUB FEAQKAKANKAVDGGGGSLVPRGSGGGGSERHFVYQFMGECYFTNGTQRIRYVTRYIYNR ----------------------------------------1------------------- EEYVRYDSDVGEHRAVTELGRPDAEYWNSQPEILERTRAELDTVCRHNYEGPETHTSLRR --------------------------------------------1--------------- LEQPNVVISLSRTEALNHHNTLVCSVTDFYPAKIKVRWFRNGQEETVGVSSTQLIRNGDW -----------------------2------------------------------------ TFQVLVMLEMTPRRGEVYTCHVEHPSLKSPITVEWKA -------------------2----------------- >NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 1; SWP:P46531; PDB:1PB5A EEACELPECQEDAGNKVCSLQCNNHACGWDGGDCS ---1----2--------3---2----1------3- >SCARABAECIN; SWP:Q86SC0; PDB:1IYCA ELPKLPDDKVLIRSRSNCPKGKVWNGFDCKSPFAFS -----------------1----------1------- >ALPHA-L-ARABINOFURANOSIDASE; SWP:O69262; PDB:2VRKA ASRVVVNADRVKGTINRNIYGHFSEHLGRCIYEGLWVGEDSPIPNTNGIRNDVLEALKQK ------------------------------------------------------------ IPVLRWPGGCFADEYHWKDGVGPREKRKRVNTHWGGVIENNHFGTHEFLCELLGCEPYIS ---------1-------------------------------------------------- GNVGSGTVQESEWVEYITFDGESPANWRRENGREKPWRIKYWGVGNENWGCGGNRAEYYA --------------------------------------------------1--------- DLYRQFQTYLRNYGDNKLHKIACGANTADYHWTEVLKQAAPFHGLSLHYYTVPGPWEKKG ------------------------------------------------------------ PATGFTTDEWWVTLKKALFDRLVTKHSAIDVYDPDKRIDLIVDEWGTWYDVEPGTNPGFL ------------------------------------------------------------ YQQNSIRDALVAGATLHIFHRHCDRVRANIAQLVNVLQSVILTEGERLLTPTYHVFNFKV ------------------------------------------------------------ HQDAELLDTWESVERTGPEGELPKVSVSASRAADGKIHISLCNLDFETGASVDIELRGLN ------------------------------------------------------------ GGVSATGTTLTSGRIDGHNTFDEPERVKPAPFRDFKLEGGHLNASLPPSVTVLELTAG ---------------------------------------------------------- >Q97W15_SULSO; SWP:Q97W15; PDB:3D5NA NIGVIILAAGEGKRFGGDKLLAKIDNTPIIRTIRIYGDLEKIIIVGKYVNELPLLDQIVI ------------------------------------------------------------ YNPFWNEGISTSLKLGLRFFKDYDAVLVALGDPFVTKEDVNKIINTFKPNCKAVIPTHKG --------------------------------------------------1--------- ERGNPVLISKSLFNEIEKLRGDVGARVILNKIKIEELCFIECSEGVLIDIDKK -------------------------------------1--------------- >CYCLIN HOMOLOG; SWP:Q01043; PDB:1BU2A RVLNNLKLRELLLPKFTSLWEIQTEVTVDNRTILLTWMHLLCESFELDKSVFPLSVSILD ------------------------------------------------------------ RYLCKKQGTKKTLQKIGAACVLIGSKIRTVKPMTVSKLTYLSCDCFTNLELINQEKDILE ------------------------------------------------------------ ALKWDTEAVLATDFLIPLCNALKIPEDLWPQLYEAASTTICKALIQPNIALLSPGLICAG ------------------------------------------------------------ GLLTTIETDNTNCRPWTCYLEDLSSILNFSTNTVRTVKDQVSEAFSLYD ------------1----1------------------------------- >Fab fragment of anti-osteopontin antibody 23C3, Light chain; SWP:NA; PDB:3CXDL YIQMTQSPASLSVSVGETVTITCRASENIYSFLAWYQQKQGKSPQLLVYAATNLADGVPS ----------------------1------------------------------------- RFSGSGSGTQFSLKINSLQSEDFGTYYCQHFWGTPFTFGSGTKLEIKRSDAAPTVSIFPP ---------------------------1-------------------------------- SAAQLSSGGGSVVCFLNNFYPKDINVKWKIDGAERGNGVLNSWTSQDSADSTYSMSSTLT -------------2---------------------------------------------- SGGDEYERHNSYTCEATHKTSTSPIVKSFNRAA -------------2------------------- >Mu-conotoxin PIIIA; SWP:P58925; PDB:1R9IA RLCCGFKSCRSRQCKHRC --12---------1---2 >THIOL:DISULFIDE INTERCHANGE PROTEIN DSBD; SWP:P58162; PDB:1UC7A AQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA --------------------------------------1--1------------------ DTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLR ------------------------------------------------------------ DRQP ---- >FAB OF ANTIBODY 7G10, HEAVY CHAIN; SWP:NA; PDB:3D85B EVQLQQSGPELVKPGASVKMSCKASGYTFTSNVMHWVKQKPGQGLEWIGYINPYNDGTKY ---------------------1-------------------------------------- NEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARNWDVAYWGQGTLVTVSAASTKG -----------------------------------1------------------------ PSVFPLAPSSKTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLS --------------------2--------------------------------------- SVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS ----------------2------------------- >ANTIBODY LIGHT CHAIN; SWP:NA; PDB:2QQNL DIQMTQSPSSLSASVGDRVTITCRASQYFSSYLAWYQQKPGKAPKLLIYGASSRASGVPS ----------------------1------------------------------------- RFSGSGSGTDFTLTISSLQPEDFATYYCQQYLGSPPTFGQGTKVEIKRTVAAPSVFIFPP ---------------------------1-------------------------------- SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLT -------------2---------------------------------------------- LSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC -------------2-------------------- >SEC24 RELATED GENE FAMILY, MEMBER D; SWP:Q8IYI7; PDB:3EFOB AMGSPIQVIENDRASRGGQVYATNTRGQIPPLVTTDCMIQDQGNASPRFIRCTTYCFPCT ----------------------------------------------------------1- SDMAKQAQIPLAAVIKPFATIPSNESPLYLVNHGESGPVRCNRCKAYMCPFMQFIEGGRR ------------------------------------------------------------ YQCGFCNCVNDVPPFYFQHLDHIGRRLDHYEKPELSLGSYEYVATLDYCRKSKPPNPPAF ------------------------------------------------------------ IFMIDVSYSNIKNGLVKLICEELKTMLEKIPKEEQEETSAIRVGFITYNKVLHFFNVKSN ------------------------------------------------------------ LAQPQMMVVTDVGEVFVPLLDGFLVNYQESQSVIHNLLDQIPDMFADSNENETVFAPVIQ ------------------------------------------------------------ AGMEALKAADCPGKLFIFHSSLPTAEAPGKLKNRDDKKLVNTDKEKILFQPQTNVYDSLA ------------------------------------------------------------ KDCVAHGCSVTLFLFPSQYVDVASLGLVPQLTGGTLYKYNNFQMHLDRQQFLNDLRNDIE ------------------------------------------------------------ KKIGFDAIMRVRTSTGFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFKHDDKLSEDSG ------------------------------------------------------------ ALIQCAVLYTTISGQRRLRIHNLGLNCSSQLADLYKSCETDALINFFAKSAFKAVLHQPL --------------------------1--------------------------------- KVIREILVNQTAHMLACYRKNCASPSAASQLILPDSMKVLPVYMNCLLKNCVLLSRPEIS ------------------------------------------------------------ TDERAYQRQLVMTMGVADSQLFFYPQLLPIHTLDVKSTMLPAAVRCSESRLSEEGIFLLA ------------------------------------------------------------ NGLHMFLWLGVSSPPELIQGIFNVPSFAHINTDMTLLPEVGNPYSQQLRMIMGIIQQKRP ------------------------------------------------------------ YSMKLTIVKQREQPEMVFRQFLVEDKGGSSYVDFLCCVHKEICQLLN ----------------------------------------------- >NATRIURETIC PEPTIDES B; SWP:P16860; PDB:1YK1E GCFGRKMDRISSSSGLGCKVL -1---------------1--- >INTERLEUKIN-13 RECEPTOR ALPHA-1 CHAIN; SWP:P78552; PDB:3BPNC ETQPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIAPETRRSIEVP --------------------------------1--------------------------- LNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPG -----2------1--------------2----------------3---------3----- RNTSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVQHSVQIMVKDNAGKIKP -----------------------4-----------4------------------------ SFNIVPLTSRVKPDPPHIKNLSFHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVF -----------------------------------------5------------------ YVQEAKCEENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGK ------6-----6-----------------------5------------------ >PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN; SWP:Q74TY5; PDB:2Z23A ANVPTGVQLAEKQVLVRNNGSEPQSLDPHKIEGVPESNISRDLLEGLVINDPNGNIVPGA ------------------------------------------------------------ AESWDNKDFKVWTFNIRKDAKWSNGDPVTAQDFVYSWQRLADPKTVSPYASYLQYAHLTN ------------------------------------------------------------ IDDIITGKAAPDTLGVKALDDHTLEVTLSEPVPYLDKLLAHPLMSPVNKTVVEKFGEKWT ------------------------------------------------------------ QPQNFVGNGAYKLKDWIVNERIVLERSPTYWDNAKTVINQVTYLPISSEVTDVNRYRSGE ------------------------------------------------------------ IDMTYNNMPIELFQKLKKEIPDQVHVDPYLCTYYYEINNQKAPFTDARVREALKLGMDRD ------------------------------1----------------------------- IIVNKVKNQGDLPAYGFTPPYTSGAELTPPEWFSWTQEKRNEVAKKLLAEAGYTKDNPLK ------------------------------------------------------------ FSLLYNTSDLHKKLAIAAASIWKKNLGVDVKLENQEWKTFLDTRHQGTYDVARAAWCADY --------------------------------------------------------1--- NEPSSFLNMMLSNSSNNTTHYKSSVFDKLIEDTLKVKSEKERADLYQQAEIQLDKDSAIV ------------------------------------------------------------ PVFYYVSARLVKPYVGGYTGKDPLDNMHVKDLYIIKQ ------------------------------------- >FIBROBLAST (INTERSTITIAL) COLLAGENASE (MMP-1); SWP:P21692; PDB:1FBLA FVLTPGNPRWENTHLTYRIENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVSEGQADI ------------------------------------------------------------ MISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKNFRDYNLYRVAAHE ------------------------------------------------------------ LGHSLGLSHSTDIGALMYPNYIYTGDVQLSQDDIDGIQAIYGPSENPVQPSGPQTPQVCD ----------------------------------------------------------1- SKLTFDAITTLRGELMFFKDRFYMRTNSFYPEVELNFISVFWPQVPNGLQAAYEIADRDE ------------------------------------------------------------ VRFFKGNKYWAVRGQDVLYGYPKDIHRSFGFPSTVKNIDAAVFEEDTGKTYFFVAHECWR ------------------------------------------------------------ YDEYKQSMDTGYPKMIAEEFPGIGNKVDAVFQKDGFLYFFHGTRQYQFDFKTKRILTLQK ------------------------------------------------------------ ANSWFNC ------1 >HEMAGGLUTININ; SWP:Q83531; PDB:2RKCA SGPTTIRGQFSNMSLSLLDLYLGRGYNVSSIVTMTSQGMYGGTYLVEKPIQLSMYRVFEV ------------------------------------------------------------ GVIRNPGLGAPVFHMTNYLEQPVSNDLSNCMVALGELKLAALCHGEDSITIPYQGVSFQL -----------------------------1------------1----------------- VKLGVWKSPTDMQSWVPLSTDDPVIDRLYLSSHRGVIADNQAKWAVPTTRTDDKLRMETC -----------------------------------------------------------2 FQQACKGKIQALCENPEWAPLKDNRIPSYGVLSVDLSTVELKIKIASGFGPLITHGSGMD ----3-------3----------------------------------------------- LYKSNHNNVYWLTIPPMKNLALGVINTLEWIPRFKVSPYLFTVPIKEAGEDCHAPTYLDG ---------------------------------------------------2-------- DVKLSSNLVILPGQDLQYVLATYDTSRVEAVVYYVYSPSRSFSYFYPFRLPIKGVPIELQ ------------------------------------------------------------ VECFTWDQKLWCRHFCVLADSESGGHITHSGMVGMGVSC --4--------4--------------------------- >putative Cobalamin biosynthesis protein G homolog; SWP:Q97WD0; PDB:3EEQA SLIENLWRGICIISASEDAFSAGETIKEKLKSFEIPVVHYRYKDAEIETIWKCYDAIVFV ----------------------------------------------------1------- MALEGATRIVCKYAKSKTEDPAIVCIDDKINYVIPLLGGHWGANDIARELSVILNSTPII ------------------------------------------------------------ TKLSIERIANILIAKIINPENIVKINAALLRDESICIDGIDVNVNFPENIKVCSYIISLR -----------------------------------2----------------2------- GDKEYKDKIVVWLKPLKISIGIGSKKDVKMEEIRDGIYKVLERLNLKRERIGIIASIREE ------------------------------------------------------------ VKKIADEFNVRFRLVNEEEINNFMNPCLTPPSKTKGVAEISALIAGGRNSKLILRKIAIS --------------------------1--------------------------------- RNSTIAVATYE ----------- >RIBOSOME-INACTIVATING PROTEIN PD-L4; SWP:P84854; PDB:2QESA VNTITFDVGNATINKYATFMESLRNEAKDPTLKCYGIPMLPDSNLTPKYVLVKLQDASSK ---------------------------------1-------------------------- TITLMLRRNNLYVMGYSDLYNGKCRYHIFNDISSTESTDVENTLCPNSNSREKKAINYNS -----------------------2--------------------2--------------- QYSTLQNKAGVSSRSQVQLGIQILNSDIGKISGVSTFTDKTEAEFLLVAIQMVSEAARFK ------------------------------------------------------------ YIENQVKTNFNRAFNPNPKVLSLEENWGKISLAIHNAKNGALTSPLELKNADDTKWIVLR ------------------------------------------------------------ VDEIKPDMGLLNYVSGTCQTT -----------------1--- >MATUZUMAB FAB HEAVY CHAIN; SWP:NA; PDB:3C08H QVQLVQSGAEVKKPGASVKVSCKASHWMHWVRQAPGQGLEWIGEFNPSNGRTNYNEKFKS ---------------------1-------------------------------------- KATMTVDTSTNTAYMELSSLRSEDTAVYYCASRDYDYDGRYFDYWGQGTLVTVSSASTKG -----------------------------1------------------------------ PSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL ---------------------2-------------------------------------- SSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS -----------------2------------------- >ENXYN11A; SWP:NA; PDB:2VGDA AQTCLTSSQTGTNNGFYYSFWKDSPGTVNFCLQSGGRYTSNWSGINNWVGGKGWQTGSRR ---1--------------------------1----------------------------- NITYSGSFNSPGNGYLALYGWTTNPLVEYYVVDSWGSWRPPGSDGTFLGTVNSDGGTYDI ------------------------------------------------------------ YRAQRVNAPSIIGNATFYQYWSVRQSKRVGGTITTGNHFDAWASVGLNLGTHNYQIMATE ------------------------------------------------------------ GYQSSGSSDITVSEG --------------- >NRDH-REDOXIN; SWP:O69271; PDB:1R7HA MSITLYTKPACVQCTATKKALDRAGLAYNTVDISLDDEARDYVMALGYVQAPVVEVDGEH ----------1--1---------------------------------------------- WSGFRPERIKQLQA -------------- >PROTEIN (TRYPSIN INHIBITOR C2); SWP:Q40378; PDB:1QH2B RICTNCCAGKKGCKYFSDDGTFICEGES -----1-----------------1---- >LEUKOCYTE SURFACE ANTIGEN CD47; SWP:Q08722; PDB:2JJSC LLFNKTKSVEFTFGNDTVVIPCFVTNMEAQNTTEVYVKWKFKGRDIYTFDGALNKSTVPT ---------------------1-------------------------------------- DFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELTREGETIIELKYRVV ----------------------------------1-------------------- >CALCICLUDINE; SWP:P81658; PDB:1BF0A WQPPWYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCLGK ------1--------2---------------3-------2------------3---1--- >Fruit-specific protein; SWP:P14903; PDB:2HLGA LCNEPCSSNSDCIGITLCQFCKEKTDQYGLTYRTCNLLP -1---2-----3-----1--2-------------3---- >PROTEIN (MANNOSE-BINDING PROTEIN A); SWP:P19999; PDB:1BUUA AIEVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTNHERMPFSKVKALCSELR -------------------------------------------------------1---- GTVAIPRNAEENKAIQEVAKTSAFLGITDEVTEGQFMYVTGGRLTYSNWKKDEPNDHGSG ------------------------------------------------------------ EDCVTIVDNGLWNDISCQASHTAVCEFPA --2-------------2-------1---- >SYNTHETIC PEPTIDE ANALOGUE OF SHK TOXIN; SWP:P29187; PDB:1C2UA RSIDTIPKSRCTAFQCKHSAKYRLSFCRKTCGT ----------1----2----------1---2-- >ABT-007 FAB FRAGMENT; SWP:NA; PDB:2JIXD QVQLQESGPGLVKPSETLSLTCTVSGASISSYYWSWIRQPPGKGLEWIGYIGGEGSTNYN ---------------------1-------------------------------------- PSLKSRVTISVDTSKNQFSLKLRSVTAADTAVYYCARERLGIGDYWGQGTLVTVSSASTK ----------------------------------1------------------------- GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS ----------------------2------------------------------------- LSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK ------------------2------------------ >HLA class II histocompatibility antigen, DRB1-1 beta chain; SWP:P04229; PDB:2FSEB PRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQ ----------1------------------------------------------------- KDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPTVTVYPTKTQPLQHHNLLVCSVSDFYP --------------1-------------------------------------2------- GNIEVRWFRNGKEEETGIVSTGLVRNGDWTFQTLVMLETVPQSGEVYTCQVEHPSLTDPV ------------------------------------------------2----------- TVEWKA ------ >MALTASE-GLUCOAMYLASE, INTESTINAL; SWP:O43451; PDB:2QLYA VNELERINCIPDQPPTKATCDQRGCCWNPQGAVSVPWCYYSKNHSYHVEGNLVNTNAGFT --------1---------------1----------------------------------- ARLKNLPSSPVFGSNVDNVLLTAEYQTSNRFHFKLTDQTNNRFEVPHEHVQSFSGNAAAS ------------------------------------------------------------ LTYQVEISRQPFSIKVTRRSNNRVLFDSSIGPLLFADQFLQLSTRLPSTNVYGLGEHVHQ ------------------------------------------------------------ QYRHDMNWKTWPIFNRDTTPNGNGTNLYGAQTFFLCLEDASGLSFGVFLMNSNAMEVVLQ ------------------------------------------------------------ PAPAITYRTIGGILDFYVFLGNTPEQVVQEYLELIGRPALPSYWALGFHLSRYEYGTLDN ------------------------------------------------------------ MREVVERNRAAQLPYDVQHADIDYMDERRDFTYDSVDFKGFPEFVNELHNNGQKLVIIVD ------------------------------------------------------------ PAISNNSSSSKPYGPYDRGSDMKIWVNSSDGVTPLIGEVWPGQTVFPDYTNPNCAVWWTK ------------------------------------------------------------ EFELFHNQVEFDGIWIDMNEVSNFVDGSVSGCSTNNLNNPPFTPRILDGYLFCKTLCMDA ------------------------------------------------------------ VQHWGKQYDIHNLYGYSMAVATAEAAKTVFPNKRSFILTRSTFAGSGKFAAHWLGDNTAT ------------------------------------------------------------ WDDLRWSIPGVLEFNLFGIPMVGPDICGFALDTPEELCRRWMQLGAFYPFSRNHNGQGYK --------------------------2----------2---------------------- DQDPASFGADSLLLNSSRHYLNIRYTLLPYLYTLFFRAHSRGDTVARPLLHEFYEDNSTW ------------------------------------------------------------ DVHQQFLWGPGLLITPVLDEGAEKVMAYVPDAVWYDYETGSQVRWRKQKVEMELPGDKIG ------------------------------------------------------------ LHLRGGYIFPTQQPNTTTLASRKNPLGLIIALDENKEAKGELFWDDGETKDTVANKVYLL ------------------------------------------------------------ CEFSVTQNRLEVNISQSTYKDPNNLAFNEIKILGTEEPSNVTVKHNGVPSTSPTVTYDSN ------------------------------------------------------------ LKVAIITDIDLLLGEAYTVEWAH ----------------------- >CARBOXYPEPTIDASE B2; SWP:Q96IY4; PDB:3D66A AQSGQVLAALPRTSRQVQVLQNLTTTYEIVLWQPVTADLIVKKKQVHFFVNASDVDNVKA ------------------------------------------------------------ HLNVSGIPCSVLLADVEDLIQQQISNDTVSPRASASYYEQYHSLNEIYSWIEFITERHPD ------------------------------------------------------------ MLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWIDCGIHAREWISPAFCLWFIGHITQFY -----------------------------------1------------1----------- GIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKKNRMWRKNRSFYANNHCIGTDLNRNFASK -----------------------------------------------2------------ HWCEEGASSSSCSETYCGLYPESEPEVKAVASFLRRNINQIKAYISMHSYSQHIVFPYSY --3--------2----3------------------------------------------- TRSKSKDHEELSLVASEAVRAIEKTSKNTRYTHGHGSETLYLAPGGGDDWIYDLGIKYSF ------------------------------------------------------------ TIELRDTGTYGFLLPERYIKPTCREAFAAVSKIAWHVIRNV ----------------------------------------- >MAJOR OUTER ENVELOPE GLYCOPROTEIN GP350; SWP:Q9QP87; PDB:2H6OA ALLVCQYTIQSLIQLTRDDPGFFNVEILEFPFYPACNVCTADVNATINFDVGGKKHKLNL ----1------------------------------2--2--------------------- DFGLLTPHTKAVYQPRGAFGGSENATNLFLLELLGAGELALTMRSKKLPINITAGEEQQV ------------------------------------------------------------ SLESVDVYFQDVFGTMWCHHAEMQNPVYLIPETVPYIKWDNCNSTNITAVVRAQGLDVTL -----------------1-----------------------3------------------ PLSLPTSAQDSNFSVKTEMLGNEIDIECIMEDGEISQVLPGDNKFNITCSGYESHVPSGG ---------------------------4--------------------4----------- ILTSTSPVATPIPGTGYAYSLRLTPRPVSRFLGNNSILYVFYSGNGPKASGGDYCIQSNI ------------------------------------------------------3----- VFSDEIPASQDMPTNTTDITYVGDNATYSVPMVTSEDANSPNVTVTAFWAWPNNTETDFK ------------------------------------------------------------ CKWTLTSGTPSGCENISGAFASNRTFDITVSGLGTAPKTLIITRTATNATTTTHKVIFSK 5-----------5----------------------------------------------- APESTTTSPTLNTTGFAAPN -------------------- >APICAL MEMBRANE ANTIGEN 1; SWP:Q94661; PDB:1HN6A EVENNFPCSLYKDEIMKEIERESKRIKLNDNDDEGNKKIIAPRIFISDDKDSLKCPCDPE -------1----------------------------------------------2-3--- MVSNSTCRFFVCKCVERRAEVTSNNEVVVKEEYKDEYADIPEHKPTYDKM ------1----2-3------------------------------------ >ENDOPOLYGALACTURONASE; SWP:NA; PDB:2IQ7A ASCTFTDAAAAIKGKASCTSIILNGIVVPAGTTLDMTGLKSGTTVTFQGKTTFGYKEWEG --1--------------1------------------------------------------ PLISFSGTNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLN ------------------------------------------------------------ TPVQAFSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLA ---------------------------------------------------------2-- INSGTNITFTGGTCSGGHGLSIGSVGGRSDNTVKTVTISNSKIVNSDNGVRIKTVSGATG -------------2---------------------------------------------- SVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTPTNGVPITGLTLSKITGSVASSGTNV ------------------------------------------------------------ YILCASGACSNWKWSGVSVTGGKKSTKCSNIPSGSGAAC ---3----3------------------4----------4 >RHOPTRY KINASE DOMAIN; SWP:NA; PDB:3DZOA NLYFQGFRGTDPGDVVIEELFNRIPQANVRTTSEYAADSLVSTSLWNTGQPFRVESELGE ------------------------------------------------------------ RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERAIKQMKEEVLRLRLLRGIK ------------------------------------------------------------ NQKQAKVHLRFIFPFDLVKDPQVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARL ------------------------------------------------------------ QLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFA ------------------------------------------------------------ PPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCK -------------------------------------1--------------------1- NIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLYQ ------------------------------------------------ >NADH-QUINONE OXIDOREDUCTASE CHAIN 2; SWP:Q56221; PDB:2FUG2 FFDDKQDFLEETFAKYPPEGRRAAIMPLLRRVQQEEGWIRPERIEEIARLVGTTPTEVMG ------------------------------------------------------------ VASFYSYYQFVPTGKYHLQVCATLSCKLAGAEELWDYLTETLGIGPGEVTPDGLFSVQKV ------------------------------------------------------------ ECLGSCHTAPVIQVNDEPYVECVTRARLEALLAGLRAGKRLEEIELPGKCGHHVHEVE ---------------------1---------------------------1-------- >LEUKEMIA INHIBITORY FACTOR; SWP:P15018; PDB:1EMRA LMNQIRSQLAQLNGSANALFILYYTAQGEPFPNNLEKLCGPNVTDFPPFHANGTEKAKLV --------------------------------------1--------------------- ELYRIVVYLGTSLGNITRDQKILNPSALSLHSKLNATADILRGLLSNVLCRLCSKYHVGH ------------------------------------------------------------ VDVTYGPDTSGKDVFQKKKLGCQLLGKYKQVISVLAQAF ---------------------1----------------- >APO-OVOTRANSFERRIN; SWP:P56410; PDB:1AOVA APPKTTVRWCTISSAEEKKCNSLKDHMQQERVTLSCVQKATYLDCIKAISNNEADAISLD -------------------1---------------1------------------------ GGQVFEAGLAPYKLKPIAAEVYERSGGSTTSYYAVAVVKKGTDFMIKDLRGKTSCHTGLG ------------------------------------------------------2----- RSAGWNIPIGTLIHREDIEWEGIESGISEQAVAKFFSASCVPGATIEQKLCRQCKGDAKT ------------------------------------------------------------ KCLRNGPYSGYSGAFQCLKDGKGDVAFVKHTTVQENAPEEKDEYELLCLDGSRQPVDSYK ----------------2------------------------------3------------ TCNWARVAAHAVVARDDSKIDDIWSFLGMQAYSLGVDTTSDFHLFGPPGKKDPVLKDLLF -3---------------------------------------------------------- KDSAIMLKRVPELMDSQLYLGFEYYSAIQSLRKDQLTVGPRENKIQWCAVGKDEKSKCDR -----------------------------------------------4------------ WSVVSNGEVECTILDDNKDCIVKITKGEADAISLDGGFVYTAGVCGLVPVVGESYEDETQ -------------------4------------------------5--------------- CSKDEEQPAYYFAVAVVKKSSAITWNNLQGKKSCHTAVGRTAGWNIPMGLIHNKTGSCDF ---------------------------------6-----------------------7-- DDYFSEGCAPGSPPNSRLCKLCQGSGENLLEKCVASSHEKYYGYTGALRCLVEQGDVAFI -------8----------9--8----------9----------------6---------- KHSTVGENVSGSNKDDWAKGLTRDDFELLCTNGKRAKTMDYKTCHLAKVPTHAVVARPEK -----------------------------a-------------a---------------- ANKIRELLEGQEKLFGLHGTEKERFMMFQSQTKDLLFKALTKCLVKLRQGITYKEFLGDE ------------------------------------------------------------ YYASVASLNTCNPSDLLQVCTFLEDK ----------7--------5------ >PF4-M2 CHIMERA; SWP:P02776; PDB:1PFMA MSAKELRCQCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKK -------1-2-----------------------1---------------2---------- IIKKLLES -------- >COMPLEMENT COMPONENT C8 ALPHA CHAIN; SWP:P07357; PDB:2RD7A DCSQYEPIPGSQKAALGYNILTQEDAQSVYDASYYGGQCETVYNGEWRELRYDSTCERLY -1------------------------------------1--------------------- YGDDEKYFRKPYNFLKYHFEALADTGISSEFYDNANDLLSKVKKDKSDSFGVTIGIGSPL ------------------------------------------------------------ LVGVGVSHSQDTSFLNELNKYNEKKFIFTRIFTKVQTAHFKMRKDDIMLDEGMLQSLMEL ------------------------------------------------------------ PDQYNYGMYAKFINDYGTHYITSGSMGGIYEYILVIDKAKMESLGITSRDITTCFGGSLG -----------------------------------------------------2------ IQYDHCKKFGGGKTERARKAMAVEDIISRVRGGSSTITYRSWGRSLKYNPVVIDFEMQPI -----2------------------------------------------------------ HEVLRHTSLGPLEAKRQNLRRALDQYLM ---------------------------- >T-cell immunoglobulin and mucin domain-containing protein 4; SWP:Q6U7R4; PDB:3BI9X MSEDTIIGFLGQPVTLPCHYLSWSQSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKST -----------------1------------2-----3----2------------------ KYTLLGKVQFGEVSLTISNTNRGDSGVYCCRIEVPGWFNDVKKNVRLELRRALV ----------------------------31------------------------ >2-OXOGLUTARATE DEHYDROGENASE E3 COMPONENT; SWP:Q5SLK6; PDB:2EQ7A MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYE ---------------------------------------1----1--------------- AKKGLLGAKVKGVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVL ------------------------------------------------------------ VEETGEELEARYILIATGSAPLIPPWAQVDYERVVTSTEALSFPEVPKRLIVVGGGVIGL ------------------------------------------------------------ ELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKG ------------------------------------------------------------ ARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAI ------------------------------------------------------------ GDVVRGPMLAHKASEEGIAAVEHMVRGFGHVDYQAIPSVVYTHPEIAAVGYTEEELKAQG ------------------------------------------------------------ IPYKVGKFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFF ------------------------------------------------------------ KASAEDLGRAPHAHPSLSEILKEAALAAWERP -------------------------------- >GLUTAMATE RECEPTOR DELTA-2 SUBUNIT; SWP:Q63226; PDB:2V3TA GVVLRVVTVLEEPFVVSENVLGKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPT ------------------------------------------------------------ WNGLVGELVFKRADIGISALTITPDRENVVDFTTRYDYSVGVLLRRSIQSLQDLSKQTDI ------------------------------------------------------------ PYGTVLDSAVYQHVRKGLNPSYSQWRINNNVLESQAGIQKVKYGNYAFVWDAAVLEYVAI ------------------------------------------------------------ NDPDCSFYTVTVADRGYGIALQHGSPYRDVFSQRILELQQSGDDILKHKWWPKNGQCD ----1---------------------------------------------------1- >ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE 2; SWP:O35795; PDB:3CJ1A PALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYANDPSKAGQS ---------------------------------------1-------------------- LVRCLEQALRDVPRDRHASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFR ---1-------------------------------------------------------- GARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFETTS ------------------------------------------------------------ PSEDPGNEVHLRLYGQHYRVYTHSFLCYGRDQILLRLLASALQIHRFHPCWPKGYSTQVL --------------------------2----------------------3---------- LQEVYQSPCTMGQSAIVSLSGTSNATLCRDLVSRLFNISSCPFSQCSFNGVFQPPVAGNF --------2------------------3------------4----4-------------- IAFSAFYYTVDFLTTVMGLPVGTLKQLEEATEITCNQTWTELQARVPGQKTRLADYCAVA ----------------------------------5---------------------5--- MFIHQLLSRGYHFDERSFREVVFQKKAADTAVGWALGYMLNLTNLIPADLPGLRKGTHF ----------------------------------------------------------- >ERYTHROCYTE MEMBRANE PROTEIN 1; SWP:Q6UDW7; PDB:3BQIA SCDLNATNYIRGCQSKTYDGKIFPGKGGEKQWICKDTIIHGDTNGACIPPRTQNLCVGEL -1----------2--------------------3------------3--------2---- WDKSYGGRSNIKNDTKELLKEKIKNAIHKETELLYEYHDTGTAIISKNDPNGLPKGFCHA ---------------------------------------------------------4-- VQRSFIDYKNMILGTSVNIYEHIGKLQEDIKKIIEKGTPQQSTENVNAWWKGIEREMWDA ------------------------------------------------------------ VRCAITKINKKNNNSIFNGDECGVSPPTDQSVSWFKEWGEQFCIERLRYEQNIREACTEK --1------------------4--------------------5-------------6--- KCINSDKIQGACKRKCEKYKKYISEKKQEWDKQKTKYENKYVGKSASDLLKENYPECISA -7---------6---8----------------------------------------5--- NFDFIFNDNIEYKTYYPYGDYSSICSCE ------------------------8-7- >TCR YAE62 ALPHA CHAIN; SWP:P14434; PDB:3C60A DSVTQMQGQVTLSENDFLFINCTYSTTGYPTLFWYVQYSGEGPQLLLQVTTANNKGSSRG ---------------------1-------------------------------------- FEATYDKGTTSFHLQKTSVQEIDSAVYYCAANSGTYQRFGTGTKLQVVPNIQNPDPAVYQ ----------------------------1------------------------------- LRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDF -----------2------------------------------------------------ ACANAFNNSIIPEDTFFPS -2----------------- >MONOCLONAL ANTIBODY FAB FRAGMENT MN423; SWP:NA; PDB:2V17H EVNLVESGGGLEQSGGSLSLSCAASGFTFTDYYMSWVRQPPGKALEWLALIRNKAKGYTT ---------------------1-------------------------------------- EYSASVKGRFTISRDNSQSILYLQMNALRAEDSAIYYCARDNGAARATFAYWGQGTLVTV -------------------------------------1---------------------- SAAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQ ----------------------------2------------------------------- SGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPS -----------------------2------------------ >TETRANECTIN; SWP:P05452; PDB:1HTNA LKSRLDTLSQEVALLKEQQALQTVCLKGTKVHMKCFLAFTQTKTFHEASEDCISRGGTLS ------------------------1---------1----------------2-------- TPQTGSENDALYEYLRQSVGNEAEIWLGLNDMAAEGTWVDMTGARIAYKNWETEITAQPD ------------------------------------------------------------ GGKTENCAVLSGAANGKWFDKRCRDQLPYICQFGIV ------3---------------3-------2----- >Ectonucleotide pyrophosphatase/phosphodiesterase family member 1; SWP:P22413; PDB:2YS0A GSSGSSGWTCNKFRCGEKRLTRSLCACSDDCKDQGDCCINYSSVCQGEKSSGPSSG ---------1----2---------3-1---4-----43------2----------- >HEMAGGLUTININ-ESTERASE; SWP:P15776; PDB:3CL4A FDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSI -------------------------1--------------------1------------- FRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMA ----------------------------------2------------------------- VYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYYKVEADFYLSGCD -----------------------2----------------------------------3- EYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTETITTGFDFNCHYLVLPSGN ------4-------------------------------------------4--------- YLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSDNMTAVACQPPYCYFRNST -----------------3------------------------------5----5------ TNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVSSVWPLYSYGRCPTAAD ----------------------------6-----------------------6----- >GLYCOGEN OPERON PROTEIN GLGX; SWP:P95868; PDB:2VNCA DRPLRPGDPYPLGSNWIEDDDGVNFSLFSENAEKVELLLYSLTNQKYPKEIIEVKNKTGD ------------------------------------------------------------ IWHVFVPGLRPGQLYAYRVYGPYKPELGLRFNPNKVLIDPYAKAINGSVIWNDAVFGYKI ------------------------------------------------------------ GDQNQDLTYDERDSGEYVPKSVVINPYFEWDDEDFIKGKKVPLKDTVIYEVHVKGFTKLR ------------------------------------------------------------ LDLPENIRGTYEGLASEQMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPIN ------------------------------------------------------------ FFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVIIDVVYNHTAEGNHLGPTLSFRGID -----1------1----------------------------------------------- NTAYYMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGFRFDLAAAL ------------------------------------------------------------ ARELYSVNMLNTFFIALQQDPILSQVKLIAEPWDVGQGGYQVGNFPYQWAEWNGKYRDSI ------------------------------------------------------------ RRFWRGEALPYSEIANRLLGSPDIYLGNNKTPFASINYVTSHDGFTLEDLVSYNQKHNEA ------------------------------------------------------------ NGFNNQDGMNENYSWNCGAEGPTNDQNVVICREKQKRNFMITLLVSQGTPMILGGDELSR ----------------2-------------2----------------------------- TQRGNNNAFCQDNEITWFDWNLDERKSKFLEFVKKMIQFYRAHPAFRRERYFDVTFYTLE ------------------------------------------------------------ GREVDEKTWSSPTQLVIFVLEGSVMDEINMYGERIADDSFLIILNANPNNVKVKFPKGKW ------------------------------------------------------------ ELVISSYLREIKPEERIIEGEKELEIEGRTALVYRRIEL --------------------------------------- >Toll-like receptor 4, Variable lymphocyte receptor B; SWP:O00206; PDB:2Z63A EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLS --1----------1---------------------------------------------- RCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPI ------------------------------------------------------------ GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL ------------------------------------------------------------ SLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNE ------------------------------------------------------------ GNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDF --------------2------------------------2-------------------- SYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLS ------------------------------------------------------------ FKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL ---33------------------------------------------------------- RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC ------------------------------------------------------------ QLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL ---------------------------------------------------4-------- SRWLNKNSQKEQGSAKCSGSGKPVRSIICP ----------------4------------- >RELAXIN, A-CHAIN; SWP:NA; PDB:6RLXA SALANKCCHVGCTKRSLARFC ------1----1--------- >SPONDIN-1; SWP:Q9HCB6; PDB:2ZOTA CSRILRAQGTRREGYTEFSLRVEGDPDFYKPGTSYRVTLSAAPPSYFRGFTLIALRENRE 1----------------------------------------------------------- EEDHAGTFQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPPAGTGCVILKASIVQK ---------------------1---------------------------2---------- RIIYFQDEGSLTKKLCEQ ---------------2-- >CYTOCHROME BC1 COMPLEX; SWP:P13272; PDB:1BE3E SHTDIKVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVS ------------------------------------------------------------ SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP ------------------------------------------------------------ QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL -----------------------1---------------1-------------------- EVPSYEFTSDDMVIVG ---------------- >BDELLASTASIN; SWP:P82107; PDB:1C9PB CGPVTCSGAQMCEVDKCVCSDLHCKVKCEHGFKKDDNGCEYACICADAPQ 1----2-----1----2-3----4---5----------3---4-5----- >HYPOTHETICAL PROTEIN RV0098/MT0107; SWP:P64685; PDB:2PFCA PIAEELLARVLEPYSCKGCRYLIDAQYSATEDSVLAYGNFTIGESAYIRSTGHFNAVELI ------------------------------------------------------------ LCFNQLAYSAFAPAVLNEEIRVLRGWSIDDYCQHQLSSMLIRKASSRFRKPLNPQKFSAR ------------------------------------------------------------ LLCRDLQVIWRYLKVPCVIEFWDNGGAASGEIELAALNIP --1-------------1----------------------- >PROTEIN (INSULIN PRECURSOR); SWP:P01308; PDB:1IOHA GIVEQCCHSICSLYQLENYCN -----1----1---------- >RIBONUCLEASE PH; SWP:Q10628; PDB:3B4TA SKREDGRLDHELRPVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPATGLGWLTAEY ------------------------------------------------------------ AMLPSATHSRSDRESVRGRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADG -------------------------------------1---------------------- GTRTAAITGAYVALADAVTYLSAAGKLSDPRPLSCAIAAVSVGVVDGRIRVDLPYEEDSR ----------------------------------1------------------------- AEVDMNVVATDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALALPYPG ------------------------------------------------------------ VLP --- >FAB56 (HEAVY CHAIN); SWP:NA; PDB:2ZJSH QVQLQQSGAELMKPGASVKISCKATGYTFSSYWIAWVKQRPGHGLEWIGEILPGSGSTNY ---------------------1-------------------------------------- NEKFKGKATFTADTSSNTAYMQLSSLTSEDSAVYYCARSPYYYGNWDYWGQGTTLTVSSA -----------------------------------1------------------------ KTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDL -------------------------2---------------------------------- YTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD --------------------2------------------- >CHARYBDOTOXIN, ALPHA CHIMERA; SWP:P13487; PDB:1CMRA CTTSKECWSVCQRLHNTSKGWCDHRGCICES 1-----2---3----------1----2-3-- >PROTEIN (IGG3-KAPPA ANTIBODY (LIGHT CHAIN)); SWP:NA; PDB:1R24A DIQMTQITSSLSVSLGDRVIISCRASQDIGNFLNWYQQKPDGSLKLLIYYTSRLQSGVPS ----------------------1------------------------------------- RFSGWGSGTDYSLTISNLEEEDIATFFCQQGKTLPYTFGGGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIV -------------2------------ >Neutrophil defensin 1 (HNP-1) (HP-1) (HP1) (Defensin, alpha 1); SWP:P59665; PDB:2PM1A ACYCRIPACIAGEYGTCIYQGLWAFCC -1-2----3-------2--------31 >CONTACTIN 2; SWP:Q02246; PDB:2OM5A TFGPVFEDQPLSVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGG ---------------------------1-------------------------------- NLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKAHEGWGVML -----------------1------------------------------------------ PCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM -2---------------------------------------------------2------ DFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPRIKW -----------------------------------------------3------------ RKVAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSN ----------------------3------------------------------------- LRWGCAAAGKPRPTVRWLRNGEPLASQNRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGT ----4----------------------------------------------4-------- IYASAELAVQA ----------- >FIMF; SWP:P08189; PDB:2JMRA MADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNA ----------------1---------------------------------------1--- VSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNEQQNQIPLNAPSSALSWTTLTP ------------------------------------------------------------ GKPNTLNFYARLMATQVPVTAGHINATATFTLEYQDNHHHHHHKQADSTITIRGYVRDN ----------------------------------------------------------- >TOLL-LIKE RECEPTOR 3; SWP:Q99MB1; PDB:3CIGA QCTVRYNVADCSHLKLTHIPDDLPSNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNS -1--------1------------------------------------------------- ISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQ --------2--------------------------2------------------------ KNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSS ------------------------------------------------------------ NPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSES ------------------------------------------------------------ TFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRY ------------------------------------------------------------ LSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSL ------------------------------------------------------------ SKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQK ------------------------------------------------------------ LSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLR ------------------------------------------------------------ NLTILDLSNNNIANINEDLLEGLENLEILDFQHNNLARLWVNFLKGLSHLHILNLESNGL ------------------------------------------------------------ DEIPVGVFKNLFELKSINLGLNNLNKLEPFIFDDQTSLRSLNLQKNLITSVEKDVFGPPF ------------------------------------------------------------ QNLNSLDMRFNPFDCTCESISWFVNWINQTHTNISELSTHYLCNTPHHYYGFPLKLFDTS --------------3-4-------------------------3----------------- SCK -4- >T-CELL RECEPTOR BETA CHAIN; SWP:P01850; PDB:1YMME GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQ ----------------------1------------------------------------- GVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVLED ---------------------------------1-------------------------- LKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQP ----------------------------2------------------------------- LKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVS ---------------------------------2-------------------------- AEAWGR ------ >LIPOCALIN; SWP:Q09JR9; PDB:3BRNA AQCDFGGPFQAYKSVNGPGNGGYYLRKTTKPGTPECAYVLVPQNTLSEGQSTSFTYGKLQ --1--------------------------------2------------------------ NGQMIQLTATVTVNGDKIEVTGAGQDLSGTTTVLFSDYRSCDVMRGPDGNYELWVHSSAI ----------------------------------------3------------------- NLQSYGCCDTKFAQVAGGRPIHHTWQTYCPPLP ------13--------------------2---- >Agelenin; SWP:P31328; PDB:2E2SA GGCLPHNRFCNALSGPRCCSGLKCKELSIWDSRCL --1------2-------31----2---------3- >CHARYBDOTOXIN; SWP:P13487; PDB:1BAHA FTNVSCTTSKEWSVCQRLHNTSRGKCMNKKRCYS -----1--------2----------1-----2-- >SCYTALIDOPEPSIN B; SWP:P15369; PDB:1S2BA TVESNWGGAILIGSDFDTVSATANVPSASGGSSAAGTAWVGIDGDTCQTAILQTGFDWYG ----------------------------------------------1------------- DGTYDAWYEWEVSITISEGDSIQMSVTATSDTSGSATLENLTTGQKVSKSFSNESSGSLC -----------------------------------------------------------1 RTNAEFIIEDFEECNSNGSDCEFVPFASFSPAVEFTDCSVTSDGESVSLDDAQITQVIIN -------------2------2--------------------------------------- NQDVTDCSVSGTTVSCSYV ------3--------3--- >462AA LONG HYPOTHETICAL SELENIUM-BINDING PROTEIN; SWP:Q976Y0; PDB:2ECEA RDPTFYPSPKMAMKAPPEDLAYVACLYTGTGINRADFIAVVDVNPKSETYSKIVHKVELP ------------------------------------------------------------ YINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIE -------------1----2----------------------------------------- PEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQ -----------------1------------------------------------------ YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG ------------------------------------------------------------ EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEG ------------------------------------------------------------ NLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGI ------------------------------------------------------------ FHRADHPAGHKLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSG ------------------------------------------------------------ GLEIDKEFFVDFGEARSHQVRLSGGDASSDSYCYP --------------------------------2-- >MYTILIN-B; SWP:P81613; PDB:2EEMA SCASRCKGHCRARRCGYYVSVLYRGRCYCKCLRC -1---2---3----4-----------1-2-3--4 >HIRUDIN VARIANT-1; SWP:P01050; PDB:2JOOA VVYTDCTESGQNLCLCEGSNVCGQGNKCILGRGDSKNQCVTGEGTPKPQSH -----1-------1-2-----3-----2----------3------------ >RFR-DOMAIN; SWP:NA; PDB:2F3LA ASYEDVKLIGEDFSGKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGADLTN ------------------------------------------------------------ GLAYLTSFKGADLTNAVLTEAIRTKFDDAKITGADFSLAVLDVYEVDKLCDRADGVNPKT -------------------------------------------------1---------- GVSTRESLRC ---------1 >PRM; SWP:O09234; PDB:3C5XC FHLTTRNGEPHMIVSRQEKGKSLLFKTEDGVNMCTLMAMDLGELCEDTITYKCPLLRQNE ---------------------------------1----------2-------3------- PEDIDCWCNSTSTWVTYGTCT -----3-1-----------2- >CHEMOSENSORY PROTEIN CSP1; SWP:Q8MMK7; PDB:2JNTA YTDKYDKINLQEILENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQE -------------------------1------1------------------2--2----- KGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKYEDRAKAKGIVIPE ------------------------------------------------ >Neopetrosiamide A; SWP:NA; PDB:2JUYA FFCPFGCALVDCGPNRPCRDTGFSCDC --1---2----2-----3------1-3 >BM-40; SWP:P09486; PDB:1BMOA PCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKC -1----2-----1---------2-3-----4----------5----------4------3 TLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTE ------------------5-----6----------------------------------- KQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHT ------------------------------------------------------------ ELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDIDKDLVI --------------6-------7---------------7-------------- >FAB 83-14 LIGHT CHAIN; SWP:NA; PDB:2DTGD DIQMTQSPSSLSASLGERVSLTCRASQDIGGNLYWLQQGPDGTIKRLIYATSSLDPGVPK ----------------------1------------------------------------- RFSGSRSGSDYSLTISSLKSEDFVDYYCLQYSSSPWTFGGGTKLEIKRADAAPTVSIFPP ---------------------------1-------------------------------- SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT -------------2---------------------------------------------- LTKDEYERHNSYTCEATHKTSTSPIVKSFNRGEC -------------2-------------------- >TYPE IIA BACTERIOCIN CARNOBACTERIOCIN B2; SWP:P38580; PDB:1CW5A VNYGNGVSCSKTKCSVNWGQAFQERYTAGINSFVSGVASGAGSIGRRP --------1----1---------------------------------- >Phospholipase A2 homolog, ammodytin L; SWP:P17935; PDB:3DIHA SVIEFGKMIQEETDKNPLTSYSFYGCHCGLGNKGKPKDATDRCCFVHSCCYAKLSDCSPK -------------------------1-2--------------32----45------6--- TNRYEYHRENGAIVCGSSTPCKKQICECDRAAAICFRENLKTYNKKYKVYLRFKCKGVSE --------------7-----6----7-5------3-------------------1----- KC -4 >SKI2-TYPE HELICASE; SWP:NA; PDB:2VA8A WMPIEDLKLPSNVIEIIKKRGIKKLNPPQTEAVKKGLLEGNRLLLTSPTGSGKTLIAEMG ------------------------------------------------------------ IISFLLKNGGKAIYVTPLRALTNEKYLTFKDWELIGFKVAMTSGDYDTDDAWLKNYDIII ------------------------------------------------------------ TTYEKLDSLWRHRPEWLNEVNYFVLDELHYLNDPERGPVVESVTIRAKRRNLLALSATIS ------------------------------------------------------------ NYKQIAKWLGAEPVATNWRPVPLIEGVIYPERKKKEYNVIFKDNTTKKVHGDDAIIAYTL ------------------------------------------------------------ DSLSKNGQVLVFRNSRKMAESTALKIANYMNFVSLDENALSEILKQLDDIEEGGSDEKEL ------------------------------------------------------------ LKSLISKGVAYHHAGLSKALRDLIEEGFRQRKIKVIVATPTLAAGVNLPARTVIIGDIPI ------------------------------------------------------------ MEYKQMSGRAGRPGFDQIGESIVVVRDKEDVDRVFKKYVLSDVEPIESKLGSERAFYTFL ------------------------------------------------------------ LGILSAEGNLSEKQLENFAYESLLAKQLVDVYFDRAIRWLLEHSFIKEEGNTFALTNFGK ------------------------------------------------------------ RVADLYINPFTADIIRKGLEGHKASCELAYLHLLAFTPDGPLVSVGRNEEEELIELLEDL -------------------------1---------------------------------- DCELLIEEPYEEDEYSLYINALKVALIMKDWMDEVDEDTILSKYNIGSGDLRNMVETMDW -1---------------------------------------------------------- LTYSAYHLSRELKLNEHADKLRILNLRVRDGIKEELLELVQISGVGRKRARLLYNNGIKE ------------------------------------------------------------ LGDVVMNPDKVKNLLGQKLGEKVVQEAARLLN -------------------------------- >NIFU-LIKE PROTEIN; SWP:O67045; PDB:2Z7EA MSFEYNEKVLDHFLNPRNVGVLEDANGVGQCGNPACGAAMLFTIKVNPENDVIEDVRFKT ------------------------------1----2------------------------ FGCGSAIAVSSMLTEMVKGKPIQYALNLTYKDIFEELGGLPPQKIHCTNLGLETLHVAIK ----------------------------------------------2------------- DYLMKQGRVEEASKIPDCY -----------------1- >TRNA-SPLICING ENDONUCLEASE; SWP:Q9HIY5; PDB:2OHCA MEQGICGSHVFFIEDGKSKNYIIGKYKIGYLSGDNLILDPYECLYLYFKGRISFQNSDSF -----1------------------------------------1----------------- RDLFDTVTFDRYVAYEILKNKGYRVKEDSGLIYFRKGTEKPLSLRVMREYDRIQFSDLVE ------------------------------------------------------------ NPVDYYFTVDEEGDPTVYSSQEIFPGGRNLVSPVSAPVVRMGGRSFGAGDLEWWIGTAFH ------------------------------------------------------------ GFRLLTENEANYISGNHSASQVDMVYSDLVGRGCIVKTGFKYGANFRVYLGRDSQHAEYL ------------------------------------------------------------ VSVMPEEERWYSISRGVRVASSVRKTMIYASIYKNEVRYVALKRVKDII ------------------------------------------------- >CIRCULAR PERMUTANT OF AVIDIN; SWP:NA; PDB:2JGSA ESPLHGTQNTINKRTQPTFGFTVNWKFSESTTVFTGQCFIDKEVLKTMWLLRSSVNDIGD -------------------------------------1---------------------- DWKATRVGIMIFTRCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVT --------------1---------------------------------- >BETA-GALACTOSIDASE; SWP:Q8A2X6; PDB:3DECA QPEWQSQYAVGLNKLDPHTYVWPYADASEVEKGTFEQSPYYSLNGQWKFHWVKNPDTRPK ------------------------------------------------------------ DFYKPSYYTGGWADIKVPGNWERQGYGTAIYVNETYEFDDKFNFKKNPPLVPYKENEVGS ------------------------------------------------------------ YRRTFKVPAGWEGRRVVLCCEGVISFYYVWVNGEFLGYNQGSKTAAEWDITDKLTDGENT ------------------------------------------------------------ IALEVYRWSSGAYLECQDWRLSGIERDVYLYSTPEQYIADYKVTSLLEKEHYKEGIFELE ------------------------------------------------------------ VAVGGTTSSIAYTLKDASDKTVLEGSRKNLIVFDEQRLPDVRRWNAEHPELYTLLLELKD ------------------------------------------------------------ AGGKVTEITGTKVGFRTSEIKNGRFCINGVPVLVKGVNRHEHSQLGRTVSKELEQDIRLK ------------------------------------------------------------ QHNINTVRNSHYPAHPYWYQLCDRYGLYVIDEANIESHGGPASLAKDSTWLPAHIDRTRR ------------------------------------------------------------ YERSKNHPSVVIWSLGNEAGNGINFERTYDWLKSVEKNRPVQYERAEENYNTDIYCRYRS -------------------------------------------------------1---- VDVIRNYVVRKDIYRPFILCEYLHAGNSCGGKEYWEVFENEPAQGGCIWDWVDQSFREVD -------------------1---------------------------------------- KDGKWYWTYGGDYGPKDVPSFGNFCCNGLVNAVREPHPHLLEVKKIYQNIKSTLIDKKNL ------------------------------------------------------------ TVRVKNWFDFSDLNEYILHWKVTGDDGTVLAEGNKEVACEPHATVELTLGAVQLPKTIRE ------------------------------------------------------------ AYLDLGWTRKKSTPLVDTAWEIAYDQFVLPASGKVWNGKPSEAGKTTFEVDENTGALKSL ------------------------------------------------------------ CLDGEELLASPVTISLFRPATDNDNRDRGAKLWRKAGLHTLTQKVVSLKESKTSATAQVN ------------------------------------------------------------ ILNVTGKKVGDATLEYTLNHNGSLKVQTTFQPDTTWVKSIARLGLTFENDTYGNVTYLGR ------------------------------------------------------------ GEHETYIDRNQSGKIGIYTTTPEKFHYYVIPQSTGNRTDVRWVKLADDSGKGCWIESDSP ------------------------------------------------------------ FQFSALPFSDLLLEKALHINDLERNGRITVHLDAKQAGVGTATCGPGVLPPYLVPLGKQT ------------------------------------------------------------ FTFTIYPVK --------- >TITIN; SWP:NA; PDB:2RIKA APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATL ------------------------------------------------------------ TVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKI ------------------------------------------------------------ GGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASS ------------------------------------------------------------ STSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMS ------------------------------1----------------------------- ENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLKA --------------------------------1-------- >YDR362CP; SWP:Q06339; PDB:2J04B SARDKIERIYGLNKEKLLLLAKVKEGFETSVFDFPFKNIQPDSPYFVCLDPPCKKESAYN ------------------------------------------------------------ KVIGDKNRTVYHEINKTEFENMIKLRTKRLKLLIGEVDAEVSTGDKIEFPVLANGKRRGF ------------------------------------------------------------ IYNVGGTDIAWLNIEENTDIGKDIQYLAVAVSQSSCIQIFKMNTSTLHCVKVQTIVHSFG ------------------------------------------------------------ EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSL ----------1-------1----------------------------------------- ITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVST ------------------------------------------------------------ VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAF ------------------------------------------------------------ AVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIQKSLRLWKWDYSIK ------------------------------------------------------------ DDKYRIDSSYEVYPHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEH ---------------------------------------------------- >WW DOMAIN-CONTAINING PROTEIN 1; SWP:Q8IX03; PDB:2Z0UA GATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRP -----------------------------------------------1-----1------ LDASDTLVFNEVFWVSSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERST ------------------------------2---------2------------------- RWYNLLS ------- >EPHRIN TYPE-A RECEPTOR 4; SWP:P54764; PDB:3CKHA NEVTLLDSRSVQGELGWIASPLEGGWEEVSIDEKNIRTYQVCNVMEPSQNNWLRTDWITR -----------------------------------------1------------------ EGAQRVYIEIKFTLRDCNSLPGVMGTCKETFNLYYYESDNDKERFIRENQFVKIDTIAAD ----------------2---------2--------------------------------- ESFTQVDIGRIMKLNTEIRDVGPLSKKGFYLAFQDVGACIALVSVRVFYK --------------------------------------1----------- >antibody for beta2 adrenoceptor, heavy chain; SWP:NA; PDB:2R4RH EVQLQQSGAELARPGASVKLSCKASGYIFTDYYINWVRQRTGQGFEWIGEIYPGSGNIDY ---------------------1-------------------------------------- NERFKDKATLTADKSSSTAYMQLSSLTSEDSAVYFCVRGFGYWGQGTTLTVSSAKTTPPS -----------------------------------1------------------------ VYPLAPGSAAQTNSAVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSS -------------------2---------------------------------------- VTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGC --------------2---------------------- >HUMAN GROWTH HORMONE; SWP:P01241; PDB:1HUWA FPTIPLSRLADNAWLRADRLNQLAFDTYQEFEEAYIPKEQIHSFWWNPQTSLCPSESIPT ----------------------------------------------------1------- PSNKEETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEG ------------------------------------------------------------ IQTLMGRLEALLKNYGLLYCFNKDMSKVSTYLRTVQCRSVEGSCGF -------------------1----------------2------2-- >PROTEIN (GROWTH-BLOCKING PEPTIDE); SWP:Q27913; PDB:1BQFA ENFSGGCVAGYMRTPDGRCKPTFYQ ------1-----------1------ >VITRONECTIN; SWP:P04004; PDB:2JQ8A DQESCKGRCTEGFNVDKKCQCDELCSYYQSCCTDYTAECKPQVTRGD ----1---2---------3-1---4-----43------2-------- >GLUXYN-1; SWP:P23904; PDB:1AXKA FDCAEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTKV --1--------------------------------------------------------- QFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGK ------------------------------------------------------------ IMMNLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNASTDYWQNWTDGGGIVNAVNGSGG ------------------------------------------------------------ NYSVNWSNTGNFVVGKGWTTGSPFRTINYNAGVWAPNGNGYLTLYGWTRSPLIEYYVVDS ------------------------------------------------------------ WGTYRPTGTYKGTVKSDGGTYDIYTTTRYNAPSIDGDRTTFTQYWSVRQSKRPTGSNATI ------------------------------------------------------------ TFSNHVNAWKSHGMNLGSNWAYQVMATEGYQSSGSSNVTVWGSVFWEPKSYFNPSTWEKA ------------------------------------------------------------ DGYSNGGVFNCTWRANNVNFTNDGKLKLGLTSS ----------1---------------------- >INTERLEUKIN-22 RECEPTOR SUBUNIT ALPHA-1; SWP:Q9HB22; PDB:3DGCR DLLQHVKFQSSNFENILTWDSGPEGTPDTVYSIEYKTYGERDWVAKKGCQRITRKSCDLT ------------------------------------------------1-------1--- VETGDLQELYYARVTAVSAGGRSATKMTDRFSSLQHTTLKPPDVTCISKVRSIQMIVHPT ---------------------------------------------2-------------- PTPIRAGDGHRLTLEDIFHDLFYHLELQVNRTYQMHLGGKQREYEFFGLTPDTEFLGTIM ------------------------------------------------------------ ICVPTWAKESAPYMCRVKTLPD --------------2------- >CYTOCHROME C OXIDASE; SWP:P00429; PDB:1OCCH YQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVS ------------------1---------2-------------2----------1------ TWDDRRAEGTFPGKI --------------- >CATHEPSIN F; SWP:Q9UBX1; PDB:1M6DA APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMD ---------------------1-------------------------------------- KACMGGLPSNAYSAIKNLGLETEDDYSYQ --1-------------------------- >SAPOSIN C; SWP:P07602; PDB:1M12A SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILS ----1--2---------------------------3----------3------------- ILLEEVSPELVCSMLHLCSGLVPR -----------2-----1------ >MONOCYTE CHEMOTACTIC PROTEIN 2; SWP:P80075; PDB:1ESRA PDSVSIPITCCFNVINRKIPIQRLESYTRITNIQCPKEAVIFKTQRGKEVCADPKERWVR ---------12-----------------------1---------------2--------- DSMKHLDQIFQNLKP --------------- >PROTEIN (HEMAGGLUTININ PRECURSOR); SWP:P03437; PDB:1HA0A STATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLID -----1-------------------------------------2-----------3---- ALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWT -------3--------------------4------------------------------- GVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGIHHPSTN ----------4------------------------------------------------- QEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSN ------------------------------------------------------------ GNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKY ----------------------------2---5-----------------------5--- VKQNTLKLATGMRNVPEKQTQGLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLK ------------------------------------------------------------ STQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELL ------------------------------------------------------------ VALENQHTIDLTDSEMNKLFEKTRRQLRENAEEMGNGCFKIYHKCDNACIESIRNGTYDH -------------------------------------1------6---6----------- DVYRNEALNNRFQI -------------- >INSULIN-LIKE GROWTH FACTOR-BINDING PROTEIN 2; SWP:P18065; PDB:2H7TA GPPPARTPCQQELDQVLERISTMRLPDERGPLEHLYSLHIPNCDKHGLYNLKQCKMSLNG --------1---------------------------------1----------2------ QRGECWCVNPNTGKLIQGAPTIRGDPECHLFYNEQQEARGVHTQRMQ ----2-3--------------------3------------------- >ANTI-LYSOZYME ANTIBODY FV REGION; SWP:NA; PDB:2EIZB QVQLQESGPGLMKPSETLSLTCSVSGDSIRSDYWSWIRQPPGKGLEYIGYVSYSGSTYYN ---------------------1-------------------------------------- PSLKSRVTISVDTSKNRFSLKLNSVTAADTAVYYCARWDGDYWGQGILVTVSS ----------------------------------1------------------ >NEMATOCYST OUTER WALL ANTIGEN; SWP:Q8IT70; PDB:2HM6A GSQITGTCPSVCSGDCYPECPPGCCGQVNLN -------1---2---3---2---13------ >PILX; SWP:NA; PDB:2OPDA EFEKGYQSQLYTEMVGINNISKQFILKNPLDDNQTIKSKLERFVSGYKMNPKIAEKYNVS ------------------------------------------------------------ VHFVNKEKPRAYSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASARAHLETLSSDVGCEA --------------------------------------1------------------1-- F - >KALATA B1; SWP:P56254; PDB:1KALA SWPVCTRNGLPVCGETCVGGTCNTPGCTC ----1-------2---3----1----2-3 >XENAVIDIN; SWP:NA; PDB:2UYWA QKCNLQGQWRNKLGSNLIIESVSQNGEFTGTYFTSVSLTNSTIRISPLTGYQKLTEKPTF --1--------------------------------------------------------- GFTVHWAFSDSITVWTGQCFLNEKGEEILHTMWLLRSSQEKEQDNWTGTRVGANTFTRL ------------------1---------------------------------------- >AMARANTHUS CAUDATUS ANTIMICROBIAL PEPTIDE 2 (ACMP2); SWP:P27275; PDB:1ZWUA VGECVRGRCPSGMCCSQGYCGKGPKYCGR ---1----2----31----2------3-- >tricyclon A; SWP:NA; PDB:1YP8A CGESCFLGTCYTKGCSCGEWKLCYGTNGGTIFD 1---2----3----1-2-----3---------- >TRYPSIN INHIBITOR II; SWP:P12071; PDB:2LETA GCPRLLMRCKQDSDCLAGCVCGPNGFCG -1------2-----3---1-2-----3- >RIBONUCLEOTIDE REDUCTASE, SMALL CHAIN; SWP:Q7RIF3; PDB:2P1IA MYPEVWNFYKKAEASFWTAEEIDLSSDLKDFEKLNVNEKHFIKHVLAFFAASENLASKFL ------------------------------------------------------------ REVEIIEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNLFHAIENIPAIKNKALWA ------------------------------------------------------------ AKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTD ------------------------------------------------------------ FNCLIYSLLENKLPENVVQNIVKEAVEVERSFICESLPCDLIGMNSRLMSQYIEFVADRL --1--------------------------------------------------------- LECLGCSKVFHSKNPFNW --1--------------- >PANCREATIC SECRETORY TRYPSIN INHIBITOR (KAZAL TYPE) VARIANT 3; SWP:P00995; PDB:1CGII DSLGREAKCYNELNGCTYEYRPVCGTDGDTYPNECVLCFENRKRQTSILIQKSGPC --------1------2-------3----------2--1-----------------3 >INSULIN; SWP:P01308; PDB:1A7FA GIVEQCCTSICSLYQLENYCN -----1----1---------- >M11L PROTEIN; SWP:Q85295; PDB:2JBXA PSRLKTAVYDYLNDVDITECTEDLLCQLSNCCDFINETYAKNYDTLYDIERDILSYNIVN ------------------------------1----------------------------- IKNTLTFALRDASPSVKLATLTLLASVIKKLNKIQHTDAAFSEVIDGIVAEEQQVIGFIQ ------------------------------------------------------------ KKCKYNT --1---- >CYSTEINE PROTEASE; SWP:Q95PM0; PDB:2P7UA APAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDTID ---------------------1---------------------------------2---- FGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQ --1-------------------------------------2------------------- DEDAIAAYLAENGPLAIAVDATSFMDYNGGILTSCTSEQLDHGVLLVGYNDASNPPYWII ----------------------------------3------------------------- KNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVVG ----------------------3------------ >IGG2A FAB FRAGMENT CNJ206; SWP:NA; PDB:1KNOB DVKLVESGGGLVQPGGSRKLSCAASGFTFSSFGMHWVRQAPEKGLEWVAYISSGSSTIYY ---------------------1-------------------------------------- ADTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARGDYYGSRGAYWGQGTLVTVSAA -----------------------------------1------------------------ KTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDL -------------------------2---------------------------------- YTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRG --------------------2------------------- >INTERLEUKIN-15; SWP:P48346; PDB:2PSMA GNWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHPSCKVTAMNCFLLELQVILHEYSNMTL -----------------------------------1------2----------------- NETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQSFIRIVQMFINTS -------------------------1--2-------------------------- >BACTERIOCIN SAKACIN P; SWP:P35618; PDB:1OG7A KYYGNGVHCGKHSCTVDWGTAIGNIGNNAAANWATGGNAGWNK --------1----1----------------------------- >TRYPSIN INHIBITOR II; SWP:P12071; PDB:1H9HI GCPRILIRCKQDSDCLAGCVCGPNGFCGSP -1------2-----3---1-2-----3--- >SERINE PROTEASE HEPSIN; SWP:P05981; PDB:1O5EL PLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTA ---------------------------1------------2------------------- GAAGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLP ---------3------------------3-1---------2--------- >IG GAMMA CHAIN C REGION; SWP:P01870; PDB:2VUOA PPPELLGGPSVFIFPPKPKDTLMISRTPEVTCVVVDVSQDDPEVQFTWYINNEQVRTARP -------------------------------1---------------------------- PLREQQFNSTIRVVSTLPIAHQDWLRGKEFKCKVHNKALPAPIEKTISKARGQPLEPKVY -------------------------------1---------------------------- TMGPPREELSSRSVSLTCMINGFYPSDISVEWEKNGKAEDNYKTTPAVLDSDGSYFLYSK -----------------2------------------------------------------ LSVPTSEWQRGDVFTCSVMHEALHNHYTQKSISRS ---------------2------------------- >DING; SWP:NA; PDB:2Q9TA MDINGGGATLPQALYQTSGVLTAGFAQYIGVGSGNGKAAFLNNDYTKFQAGVTNKNVHWA ------------------------------------------------------------ GSDSKLSATELSTYASAKQPTWGKLIQVPSVGTSVAIPFNKSGSAAVDLSVQELCGVFSG ------------------------------------------------------1----- RINTWDGISGSGRTGPIVVVYRSESSGTTELFTRFLNAKCNAETGNFAVTTTFGTSFSGG ---------------------------------------1-------------------- LPAGAVAATGSQGVMTALAAGDGRITYMSPDFAAPTLAGLDDATKVARVGKNVATNTQGV ------------------------------------------------------------ SPAAANVSAAIGAVPVPAAADRSNPDAWVPVFGPDNTAGVQPYPTSGYPILGFTNLIFSQ ------------------------------------------------------------ CYADATQTTQVRDFFTKHYGASNNNDAAITANAFVPLPTAWKATVRASFLTASNALSIGN 2----------------------------------------------------------- TNVCNGIGRPLLEH ---2---------- >OmTx3; SWP:NA; PDB:1WQEA NDPCEEVCIQHTGDVKACEEACQ ---1---2---------2---1- >neuronal acetylcholine receptor protein, alpha-7 chain; SWP:P22770; PDB:1KC4B IPGKRTESFYECCKEPYPD -----------11------ >EXOPOLYGALACTURONASE; SWP:NA; PDB:2UVEA DAPQQLQVPTLAYDESSIVLVWKAPEDTRKIVDYQIFSAGKLLGKASDNNDNFSPAKPYI ------------------------------------------------------------ DHFYVNDKDNFQHKIVMQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAKPQ ------------------------------------------------------------ IVNVRDFGAIDDGKTLNTKAIQQAIDSCKPGCRVEIPAGTYKSGALWLKSDMTLNLQAGA ---------------------------1---1---------------------------- ILLGSENPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWL ------------------------------------------------------------ RAKTAEITDELGRSLPQYVASKNSKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRSSLMT ------------------------------------------------------------ LRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFN ------------------------------------------------------------ NFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAEN ------------------------------------------------------------ NVMYLTDIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKI ------------------------------------------------------------ PAQFYDFTLKNVTVDNSTGKNPSIEIKGDTANKAWHRLVHVNNVQLNNVTPTAISDLRDS ------------------------------------------------------------ EFNKVTFTELRGDTPWHFSEVKNVKVDGKPV ------------------------------- >Heparan sulfate glucosamine 3-O-sulfotransferase 5; SWP:Q8IZT8; PDB:3BD9A SHMQQLPKAIIIGVRKGGTRALLEMLNLHPAVVKASQEIHFFDNDENYGKGIEWYRKKMP ------------------------------------------------------------ FSYPQQITIEKSPAYFITEEVPERIYKMNSSIKLLIIVREPTTRAISDYTQVLEGKERKN ------------------------------------------------------------ KTYYKFEKLAIDPNTCEVNTKYKAVRTSIYTKHLERWLKYFPIEQFHVVDGDRLITEPLP ------------------------------------------------------------ ELQLVEKFLNLPPRISQYNLYFNATRGFYCLRFNEIFNKCLARIHPEVDPSVITKLRKFF -----------------------------1---------1-------------------- HPFNQKFYQITGRTLNWP ------------------ >CIRCULIN A; SWP:P56871; PDB:1BH4A CGESCVWIPCISAALGCSCKNKVCYRNGIP 1---2----3------1-2----3------ >PROBABLE CONSERVED LIPOPROTEIN LPPA; SWP:P95010; PDB:2V7SA PDTSRRLTGEQKIQLIDSRNKGSYEAARERLTATARIIADRVSAAIPGQTWKFDDDPNIQ ------------------------------------------------------------ QSDRNGALCDKLTADIARRPIANSVFGATFSAEDFKIAANIVREEAAKYGATTESSLFNE --------1--------------------------------------------------- SAKRDYDVQGNGYEFRLLQIKFATLNITGDCFLLQKVLDLPAGQLPP ------------------------------1---------------- >HEREGULIN-ALPHA; SWP:Q02297; PDB:1HAEA SHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQEKAE -----1-------2-----1-------------2-3--------3--------------- ELY --- >PANCREATIC LIPASE RELATED PROTEIN 1; SWP:P06857; PDB:1RP1A KEVCYEQIGCFSDAEPWAGTAIRPLKVLPWSPERIGTRFLLYTNKNPNNFQTLLPS ---1-----1---------------------------------------------- >FIBRONECTIN; SWP:P02751; PDB:2EC3A GSSGSSGGSGHFRCDSSRWCHDNGVNYKIGEKWDRQGENGQMMSCTCLGNGKGEFKCDPH -------------------1------------------------2-1---------2--- EATCYDDG -------- >RANATUERIN-2CSA; SWP:NA; PDB:2K10A GILSSFKGVAKGVAKDLAGKLLETLKCKITGC --------------------------1----1 >Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; SWP:P0A9Q6; PDB:2F9YB VWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEPKDV -----------------------1--1--------------------------------- LKFRDSKKYKQKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQ ------------------------------------------------------------ ALEDNCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSA ------------------------------------------------------------ SFAMLGDLNIAEPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRL ------------------------------------------------------------ KLASILAKLMNLPAPNP ----------------- >FAB FRAGMENT MOR03268 LIGHT CHAIN; SWP:NA; PDB:2JB5L ALTQPASVSGSPGQSITISCTGTSSDVGSNNYVSWYQQHPGKAPKLMIYGGSNRPSGVSN -------------------1---------------------------------------- RFSGSKSGNTASLTISGLQAEDEADYYCRSWDSNLSYSVFGGGTKLTVLGQPKAAPSVTL ---------------------------1-------------------------------- FPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSY ----------------2------------------------------------------- LSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT ---------------2---------------- >MU-CONOTOXIN GIIIA; SWP:P01523; PDB:1TCGA RDCCTKKCKDRQCKQRCCA --12---3----1---23- >COMPLEMENT CONTROL PROTEIN; SWP:P68638; PDB:1E5GA RRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAPIC --1-------------------------2-------------1----------------2 ESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSDPPTCQI ----3---------------------------4-------------3----------4-- >NA; SWP:NA; PDB:3CVHL IQVTQSSSSFSVSLGDRVTITCKASEDIYNRLAWYQQKPGNAPRLLISGATSLETGVPDR ---------------------1-------------------------------------- FSGSGSRKDYTLIITSLQTEDVATYYCQQYWSTPLTFGAGTKLELKRADAAPTVSIFPPS --------------------------1--------------------------------- SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTL ------------2----------------------------------------------- TKDEYERHNSYTCEATHKTSTSPIVKSFN ------------2---------------- >THIOL-DISULFIDE INTERCHANGE PROTEIN; SWP:P24991; PDB:1UN2A QTIRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKY ------------------------------------------------------------ QLNPQGMDTSNMDVFVQQYADTVKYLSEYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCY -------------------------------------------------------1--1- QFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALGVEDKVTVPLFE ------------------------------------------------------------ GVQKTL ------ >Mitochondrial import inner membrane translocase subunit TIM8; SWP:P57744; PDB:3CJHB NSKQKVQMSIHQFTNICFKKCVESVNDSNLSSQEEQCLSNCVNRFLDTNIRIVNGLQNT ----------------1---2---------------2---1------------------ >PUTATIVE GLYCINE BETAINE-BINDING ABC TRANSPORTER PROTEIN; SWP:Q92N37; PDB:2REGA EPESCGTVRFSDVGWTDITATTATATTILEALGYETDVKVLSVPVTYTSLKNKDIDVFLG ----1------------------------------------------------------- NWMPTMEADIAPYREDKSVETVRENLAGAKYTLATNAKGAELGIKDFKDIAAHKDELDGK ------------------------------------------------------------ IYGIEPGNDGNRLIIDMVEKGTFDLKGFEVVESSEQGMLAQVARAEKSGDPIVFLGWEPH ------------------------------------------------------------ PMNANFKLTYLSGGDDVFGPNYGGATVHTNVRAGYTTECPNVDKLLQNLSFSLQMENEIM --------------------------------------1--------------------- GKILNDGEDPEKAAAAWLKDNPQSIEPWLSGVATKDGGDGLAAVKAALGL -------------------------------------------------- >TRANSCRIPTIONAL REGULATOR, CRP/FNR FAMILY; SWP:NA; PDB:3DV8A ENYFPLWNDLNTAQKKLISDNLITQHVKKGTIIHNGNDCTGLLLVKSGQLRTYILSDEGR --------------------------------------1--------------------- EITLYRLFDDCLLSASCIRSIQFEVTIEAEKDTDLWIIPAEIYKGIKDSAPVANYTNELA ----------------1------------------------------------------- TRFSDVWLIEQIWKSLDKRVASFLLEETSIEGTNELKITHETIANHLGSHREVITRLRYF ------------------------------------------------------------ QVEGLVKLSRGKITILDSKRLETLQRS --------------------------- >LOW AFFINITY IMMUNOGLOBULIN EPSILON FC RECEPTOR; SWP:P06734; PDB:1T8CA SGFVCNTCPEKWINFQRKCYYFGKGTKQWVHARYACDDMEGQLVSIHSPEEQDFLTKHAS ----1--2----------2----------------3------------------------ HTGSWIGLRNLDLKGEFIWVDGSHVDYSNWAPGEPTSRSQGEDCVMMRGSGRWNDAFCDR -------------------------------------------4-------------4-- KLGAWVCDRLATCTPPASEGSAE ------3-----1---------- >CORTICOTROPIN RELEASING FACTOR RECEPTOR 2; SWP:Q60748; PDB:1U34A GSGMKETAAAKFERQHMDSPDLGTTLLEQYCHRTTIGNFSGPYTYCNTTLDQIGTCWPQS ------------------------------1--------------2---------1---- APGALVERPCPEYFNGIKYNTTRNAYRECLENGTWASRVNYSHCEPILDDKQRKYDLHY ---------3------------------2--------------3--------------- >IgE Fab Fragment, heavy chain; SWP:NA; PDB:2R56H QVSLRESGGGLVQPGRSLRLSCTASGFTFRHHGMTWVRQAPGKGLEWVASLSGSGTKTHF ---------------------1-------------------------------------- ADSVKGRFTISRDNSNNTLYLQMDNVRDEDTAIYYCAKAKRVGATGYFDLWGRGTLVTVS -----------------------------------1------------------------ SASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS ---------------------------2-------------------------------- SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEP -----------------------2----------------- >IGG2A-KAPPA 26-10 FV (LIGHT CHAIN); SWP:P01631; PDB:1MAJA DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLNWYLQKAGQSPKLLIYKVSNRF ----------------------1------------------------------------- SGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCSQTTHVPPTFGGGTKLEIKR --------------------------------1-------------------- >Coagulation factor X-activating enzyme heavy chain; SWP:Q7LZ61; PDB:2E3XA QFNKIFIELVIIVDHSMAKKCNSTATNTKIYEIVNSANEIFNPLNIHVTLIGVEFWCDRD --------------------1-----------------------------------1--- LINVTSSADETLNSFGEWRASDLMTRKSHDNALLFTDMRFDLNTLGITFLAGMCQAYRSV -----------------------------------------------------2------ GIVQEQGNRNFKTAVIMAHELSHNLGMYHDGKNCICNDSSCVMSPVLSDQPSKLFSNCSI ---------------------------------3-4----4----------------3-- HDYQRYLTRYKPKCIFNPPLRKDIVSPPVCGNEIWEEGEECDCGSPANCQNPCCDAATCK -------------2---------------5----------6-7-----7---86----5- LKPGAECGNGLCCYQCKIKTAGTVCRRARDECDVPEHCTGQSAECPRDQLQQNGKPCQNN ------9----a9--8--------b------c-----a------b-----------d--- RGYCYNGDCPIMRNQCISLFGSRANVAKDSCFQENLKGSYYGYCRKENGRKIPCAPQDVK ---c----d------e--------------f------------g---------g------ CGRLFCLNNSPRNKNPCNMHYSCMDQHKGMVDPGTKCEDGKVCNNKRQCVDVNTAY h----e----------f-------------------i-----h-----i------- >AGGRETIN ALPHA CHAIN; SWP:Q9I841; PDB:2VRPA DCDFGWSPYDQHCYQAFNEQKTWDEAEKFCRAQENGAHLASIESNGEADFVSWLISQKDE -1----------1----------------2------------------------------ LADEDYVWIGLRAQNKEQQCSSEWSDGSSVSYENLIDLHTKKCGALEKLTGFRKWVNYYC ------------------------------------------3----------------3 EQMHAFVCKLLPY -------2----- >BETA-LACTAMASE GES-1; SWP:Q9KJY7; PDB:2QPNA KLTFKTDLEKLEREKAAQIGVAIVDPQGEIVAGHRMAQRFAMCSTFKFPLAALVFERIDS ------------------------------------------1----------------- GTERGDRKLSYGPDMIVEWSPATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREIGGP ------------------------------------------------------------ AAMTQYFRKIGDSVSRLDRKEPEMGDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTH ------------------------------------------------------------ TIERWLIGNQTGDATLRAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAVYTTAP --------------------------------1--------------------------- KLSAVERDELVASVGQVITQLILST ------------------------- >IG GAMMA-2B HEAVY CHAIN; SWP:P01867; PDB:2RGSA GPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDY ------------------------1----------------------------------- NSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAE ------------------------1----------------------------------- QLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSK ----------2------------------------------------------------- WEKTDSFSCNVRHEGLKNYYLKKTIS --------2----------------- >SULFITE REDUCTASE, DISSIMILATORY-TYPE SUBUNIT BETA; SWP:P45575; PDB:2V4JB AFISSGYNPEKPMANRITDIGPRKFDEFFPPVIAKNFGSWLYHEILEPGVLMHVAESGDK ------------------------------------------------------------ VYTVRVGAARLMSITHIREMCDIADKYCGGHLRFTTRNNVEFMVADEASLKALKEDLASR ------------------------------------------------------------ KFDGGSLKFPIGGTGAGVSNIVHTQGWVHCHTPATDASGPVKAIMDEVFEDFQSMRLPAP ------------------------------------------------------------ VRISLACCINMCGAVHCSDIGVVGIHRKPPMIDHEWTDQLCEIPLAVASCPTAAVRPTKL ----------------------------------------1------------------- EIGDKKVNTIAIKNERCMYCGNCYTMCPALPISDGEGDGVVIMVGGKVSNRISMPKFSKV --------------------------1--------------------------------- VVAYIPNEPPRWPSLTKTIKHIIEVYSANAYKYERLGEWAERIGWERFFSLTGLEFSHHL ------------------------------------------------------------ IDDFRDPAYYTWRQSTQFKF -------------------- >RNASE 1; SWP:A5HAK0; PDB:2VQ9A IRRRYEHFLTQHVYGGITEQTCDRVMRQRRITRFPTGNDCKEVNTFIQANGNHVRTVCTG ---------------------1-----------------2-----------------3-- GGTRQTDNRDLYMSNDQFTVITCTLRSGERHPNCRYRGKESSRKIVVACEGEWPAHYERG ----------------------1----------2--------------3----------- VIV --- >PROTEIN (CUA AZURIN); SWP:P00282; PDB:1CC3A AECSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVV --1----------------------1---------------------------------- TDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCSELCGINH ------------------------------------------------------------ ALMKGTLTLK ---------- >OMEGA-CONOTOXIN MVIIA; SWP:P05484; PDB:1TT3A CKGKGAKCSKLMYDCCTGSCRSGKC 1------2------31---2----3 >FORMYLGLYCINE GENERATING ENZYME; SWP:Q9F3C7; PDB:2Q17A ARPRSTRGQVRLPGGEFAMGDAFGEGYPADGETPVHTVRLRPFHIDETAVTNARFAAFVK ------------------------------------------------------------ ATGHVTDAERFGSSAVFHLVVAAPDADVLGSAAGAPWWINVRGAHWRRPEGARSDITGRP ------------------------------------------------------------ NHPVVHVSWNDATAYARWAGKRLPTEAEWEYAARGGLAGRRYAWGDELTPGGRWRCNIWQ ------------------------------------------------------------ GRFPHVNTAEDGHLSTAPVKSYRPNGHGLWNTAGNVWEWCSDWFSPTYYAESPTVDPHGP ------------------------------------------------------------ GTGAARVLRGGSYLCHDSYCNRYRVAARSSNTPDSSSGNLGFRCANDA --------------1----1---------------------------- >ZN-DEPENDENT ARGININE CARBOXYPEPTIDASE; SWP:NA; PDB:3BE7A SEDFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIGKINTKDATVISIPDLILIPGLMDSH ------------------------------------------------------------ VHIVGNDSKGEESIADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANYADVSVRDAIERG ------------------------------------------------------------ VINGPTMLVSGPALGITGGHCDHNLLPPEFNYSSEGVVDSPWEARKMVRKNRKYGADLIK --------------------1--------------------------------------- FCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLIGIKAAIKAGVDSVE -1---------------------------------------------------------- HASFIDDETIDMAIKNNTVLSMDIFVSDYILGEGAKAGIREESLNKERLVGKKQRENFMN ------------------------------------------------------------ AHRRGAIITFGTDAGIFDHGDNAKQFAYMVEWGMTPLEAIQASTIKTATLFGIENIGQIK ------------------------------------------------------------ EGFDADIVGVIENPLANIRTLEEVAFVMKEGKVYKREG -------------------------------------- >CELLOBIOHYDROLASE I; SWP:P62694; PDB:1AZKA TQSHYGQCGGIGYSGPTVCASGTTCQVLNPYASQCL -------1----------2-----1---------2- >GRANULIN A; SWP:P28799; PDB:2JYEA AMDVKCDMEVSCPDGYTCCRLQSGAWGCCPFTQAVCCEDHIHCCPAGFTCDTQKGTCEQK -----1-----2-----13--------24------35-----46-----5------6--- LAAALEHHHHHH ------------ >PHB DEPOLYMERASE PHAZ7; SWP:Q939Q9; PDB:2VTVA LTCGTNSGFVCKGTQTQYAGGFAPGVGYGGFGGGSCTATKTPVIFIHGNGDNAISFDMPP --1-------1------------------------------------------------- GNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKTFIDK ------------------------------------------------------------ VKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIRGLYSCYYTGYANAA ------------------------------------------------------------ APTCGSQNYYNSYTFGFFPEGWYYGVWVSNPWTGSGSTNSMRDMPAKRTAVSFYTLSAGF ------------------------------------------------------------ KDQVGCATASFWAGCDSAAKFASTTSNVKAQINVGAGSNATQADYDWADGMPAGGGDTTN -----2--------2--------------------------------------------- GVGHFRTKTNTGAIIQRMLLTTCTGLDCAAEYTTGPKAAY ----------------------3----3------------ >MCOTI-II; SWP:P82409; PDB:2PO8A CPKILKKCRRDSDCPGACICRGNGYCGSGSDGGV -------1-----2-----1-----2-------- >INSULIN A CHAIN; SWP:P01308; PDB:2JUMA GITEQCCTSICSLYQLENYCN -----1----1---------- >KAPPA-PVIIA; SWP:P56633; PDB:1AV3A CRINQKCFQHLDDCCSRKCNRFNKCV 1-----2------31---2-----3- >SLIT HOMOLOG 2 PROTEIN N-PRODUCT; SWP:O94813; PDB:2V70A ACPEKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKIN -1---2-1------2--------------------------------------------- FSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGND ------------------------------------------------------------ SFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRI -------------------------------------------3-4-------------- VTGNPRCQKPYFLKEIPIQDVAIQDFTCDD ------3--------------------4-- >NEUROTOXIN BMP03; SWP:Q9U8D1; PDB:1WM8A VGCEECPMHCKGKNANPTCDDGVCNCNV --1--2---3--------1----2-3-- >STROMAL CELL-DERIVED FACTOR 1; SWP:P48061; PDB:1VMCA RCPCRFFESHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKALN -1-2----------------------1---------------2----------------- K - >ADP-RIBOSYL CYCLASE 1; SWP:P56528; PDB:2EG9A LLVWTGEPTTKHFSDIFLGRCLIYTQILRPEMRDQNCQEILSTFKGAFVSKNPCDITRED --------------------1---------------1----------------2------ YAPLVKLVTQTIPCDKTLFWFTLEDTLLGYIADDLRWCGDPSTSDMNYVSCPHCPNNPIT -------------3-----------------------4------------4--2------ MFWKVISQKFAEDACGVVQVMLDGSLREPFYKDSTFGSVEVFSLDPNKVHKLQAWVMHDI --------------3--------------------------------------------- EGASSNACSSSSLNELKMIVQKRNMIFACVDNY -------5--------------------5---- >CARBOXYPEPTIDASE A1; SWP:P15085; PDB:2V77A ARSTDTFNYATYHTLEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKFSTGGSKRP ------------------------------------------------------------ AIWIDTGIHSREWVTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTH ------------------------------------------------------------ STNRMWRKTRSHTAGSLCIGVDPNRNWDAGFGLSGASSNPCSETYHGKFANSEVEVKSIV -----------------1----------------------1------------------- DFVKDHGNIKAFISIHSYSQLLMYPYGYKTEPVPDQDELDQLSKAAVTALASLYGTKFNY ------------------------------------------------------------ GSIIKAIYQASGSTIDWTYSQGIKYSFTFELRDTGRYGFLLPASQIIPTAKETWLALLTI ------------------------------------------------------------ MEHTLNHP -------- >THIOREDOXIN H-TYPE; SWP:P85801; PDB:3D21A GNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVI ----------------------------------1--1---------------------- DVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKITAILDSL --------------------------------------------------- >LACTOFERRICIN; SWP:P24627; PDB:1LFCA FKCRRWQWRMKKLGAPSITCVRRAF --1----------------1----- >Toxin CgNa; SWP:P0C280; PDB:2H9XA GVCRCDSDGPSVHGNTLSGTVWVGSCASGWHKCNDEYNIAYECCKQ --1-2--------------------3------2---------13-- >NEMATOCYST OUTER WALL ANTIGEN; SWP:Q8IT70; PDB:2HM3A TCPSGCSGDCYPECKPGCCGQVNLN -1---2---3---1---32------ >THYMUS AND ACTIVATION-REGULATED CHEMOKINE; SWP:Q92583; PDB:1NR2A RECCLEYFKGAIPLRKLKTWYQTSEDCSRDAIVFVTVQGRAICSDPNNKRVKNAVKYLQS --12----------------------1---------------2----------------- LE -- >ATRIAL NATRIURETIC PEPTIDE FACTOR; SWP:P01161; PDB:1T34H CFGGRIDRIGAQSGLGCNSFR 1---------------1---- >E131 ZETA PEPTIDE; SWP:NA; PDB:1KCOA VQCPHFCYELDYELCPDVCYV --1---2-------2---1-- >INSULIN A CHAIN (PH 7); SWP:P01317; PDB:1APHA GIVEQCCASVCSLYQLENYCN -----1----1---------- >ARENICIN-1; SWP:Q5SC60; PDB:2JSBA RWCVYAYVRVRGVLVRYRRCW --1----------------1- >SUBTILASE CYTOTOXIN, SUBUNIT B; SWP:Q3ZTX8; PDB:3DWAA EWTGDARDGFSGVVITQFHTGQIDNKPYFCIEGKQSAGSSISACSKNSSVWGASFSTLYN -----------------------------1-------------1---------------- QALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPDRKKNS ----------------------------------------2-----2--------- >Juvenile hormone binding protein; SWP:Q8ITP4; PDB:2RCKA SKLNLSTEPCDVSDIECISKATQVFLDNTYQGIPEYNIKKLDPITIPSLEKSIEKINLNV ---------1------1------------------------------------------- RYNNLKVTGFKNQKISHFTLVRDTKAVNFKTKVNFTAEGKLVIELPKSSKTYTGEVTIEA ------------------------------------------------------------ SAEGGAAYSYSVKTDDKGVEHYEAGPETVSCEIFGEPTLSVSSTLEDALKLDSDFKKIFT ------------------------------2----------------------------- EYGKQLTEGRKQTACRIVETVYAVSVHNIRAAARILPKSAY --------------2-------------------------- >EBOLA VIRUS ENVELOPE PROTEIN CHIMERA CONSISTING OF A FRAGMENT OF GCN4 ZIPPER CLONED N-TERMINAL TO A FRAGMENT OF GP2; SWP:Q913A3; PDB:1EBOA QIEDKIEEILSKIYHIENEIARIKKLIGEADGLIEGLRQLANETTQALQLFLRATTELRT ------------------------------------------------------------ FSILNRKAIDFLLQRWGGTCHILGPDCRIEPHDWTKNITDKIDQIIHDFVDK -------------------1------1------------------------- >Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, N-terminal eight Ig domains; SWP:NA; PDB:3DMKA QKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGK -------------------------1---------------------------------- LVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNS ---------------------1-------------------------------------- AVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSY ----2------------------------------------------------------- QCRTKHRLTGETRLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQGY -2----------------------------------------------------3----- PVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVE -----------------------------------------------3------------ TVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIES -----------------------------4------------------------------ VKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGG ----------4--------------------------------------------5---- NPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGV ---------------------------------------------------5-------- AEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKV --------------------------------6--------------------------- FPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQ ---------------------6-------------------------------------- YLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCH -----7----------------------------------------------------7- ARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDT ----------------------------------------8------------------- PGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQA ----------------------------------8-------------------- >HIV-1 CAPSID; SWP:P12497; PDB:1A43A TSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGP --------------------------------------------------1--------- GATLEEMMTACQ ----------1- >ZHAOERMIATOXIN; SWP:P84776; PDB:2PH4A SLIELTKMVFQETGKNPVTYYTLYGCNCGVGRRGKPKDATDRCCFVHRCCYKKLTGCDPK -------------------------1-2--------------32----45------6--- KDRYSYSWENKAIVCGEKNPCLKELCECDKAVAICLRKNLGTYDKNYRFTMKFLCDKPEK --------------7-----6----7-5------3-------------------1----- C 4 >TRYPSIN INHIBITOR II; SWP:P12071; PDB:1H9II GCPRILIRCKQDSDCLAGCVCTNNKFCGSP -1------2-----3---1-2-----3--- >LEUKEMIA INHIBITORY FACTOR; SWP:P09056; PDB:1LKIA NATCAIRHPCHGNLMNQIKNQLAQLNGSANALFISYYTAQGEPFPNNVEKLCAPNMTDFP ---1-----2-----------------------------------------3-------- SFHGNGTEKTKLVELYRMVAYLSASLTNITRDQKVLNPTAVSLQVKLNATIDVMRGLLSN ------------------------------------------------------------ VLCRLCNKYRVGHVDVPPVPDHSDKEAFQRKKLGCQLLGTYKQVISVVVQAF --2--1----------------------------3----------------- >TH10BOX; SWP:NA; PDB:1ICOA SKYEYTISYTFRGPGCPTVKPVTIRCE ---------------1---------1- >T-CELL SPECIFIC RANTES PROTEIN; SWP:P13501; PDB:1EQTA GYSSDTTPCCFAYIARPMPRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREY --------12----------------------1---------------2----------- INSLEMS ------- >OMSVP3; SWP:P67954; PDB:1IY6A AVSVDCSEYPKCACTMEYRPLCGSDNKTYGNKCNFCCAVVESNGTLTLSHFGKC -----1-----2-3-------4----------3--12----------------4 >Putative two-component system transcriptional response regulator; SWP:Q5F5Q1; PDB:3CO5A GNSAAIQENREVEAAAKRTSPVFLTGEAGSPFETVARYFHKNGTPWVSPARVEYLIDPEL ------------------------------------------------------------ LQKAEGGVLYVGDIAQYSRNIQTGITFIIGKAERCRVRVIASCSYAAGSDSCEEKLAGLF ------------------------------------------1--------1-------- SESVVRIPPLS ----------- >TCR 2W20 ALPHA CHAIN; SWP:P14434; PDB:3C6LA QQVRQSPQSLTVWEGETAILNCSYEDSTFDYFPWYHQFPGESPALLIAIRPVSNKKEDGR ---------------------1-------------------------------------- FTIFFNKREKKFSLHIADSQPGDSATYFCAASDNRIFFGDGTQLVVKPNIQNPEPAVYQL ----------------------------1------------------------------- KDPRSQDSTLCLFTDFDSQINVPKTMESGTFITDKTVLDMKAMDSKSNGAIAWSNQTSFT ----------2------------------------------------------------- CQDIF 2---- >DEFENSIN, MUTANT DEF-DAA; SWP:Q17027; PDB:2E3GA ATCDLASKWNWNHTLCAAHCIARRYRGGYCNSKAVCVCRN --1------------2---3---------1-----2-3-- >PROGRAMMED CELL DEATH 1 LIGAND 1; SWP:Q9NZQ7; PDB:3BIKA AFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQ ----------------------1------------------------------------- HSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMISYGGADYKRITVKVNAPYNKI ------------------------------------1----------------------- NQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTL -----------------2------------------------------------------ RINTTTNEIFYCTFRRLDPEENHTAELVIPEL -----------2-------------------- >LIPOCALIN; SWP:Q09JX9; PDB:3BS2A QQCDTVSAWQSLRGPGTGGYYLFKTTEGGKTDCTYVKGSNFNDAAQTATYTYGNLGSGNQ --1-----------------------------2--------------------------- LTQQTASASISGNAIVVGTDHSEVLYSDGSTCDVVRLNGQIELWIHSSATSNTGNLNSCC -------------------------------3--------------------------13 TDKFNQEKGSRPEHVVYRSTCPNLPA --------------------2----- >ALPHA-AMYLASE/SUBTILISIN INHIBITOR; SWP:P29421; PDB:2QN4A APPPVYDTEGHELSADGSYYVLPASPGHGGGLTMAPRVLPCPLLVAQETDERRKGFPVRF ----------------------------------------1------------------- TPWGGAAAPEDRTIRVSTDVRIRFNAATICVQSTEWHVGRRVVTGPLGRENAFRVEKYGG -----------------------------1------------------------------ GYKLVSCRDSCQDLGVSRDGARAWLGASQPPHVVVFKKA ------2---2---------------------------- >RING-BOX PROTEIN 1; SWP:P62877; PDB:1LDJB KKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHA --------------------------1--------------------------------- FHFHCISRWLKTRQVCPLDNREWEFQKY ----1----------------------- >NEURAL CELL ADHESION MOLECULE 2; SWP:O15394; PDB:2V44A ALLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRL -----------------------1------------------------------------ TIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRV --------------1------------------------------------------2-- SSSPAPAVSWLYHNVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRD ---------------------------------------------2-------------- IIVIVNV ------- >BOWMAN-BIRK TYPE BRAN TRYPSIN INHIBITOR; SWP:Q0JR25; PDB:2QN5B MERPWKCCDNIKRLPTKPDPPQWRCNDELEPSQCCKSCRICEDIYWGADPGPFCTPRPWG ------12----------------2--------34--3--4------------1------ DCCDKAFCNKMNPPTCRCVKECADACKDCQRVESSECKDRFTGHPGPVCK -56----7-------7-6---8---9--8-------9-----------5- >PROTEIN (ANDROCTONIN); SWP:P56684; PDB:1CZ6A RSVCRQIKICRRRGGCYYKCTNRPY ---1-----2-----2---1----- >CATION-INDEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR; SWP:P11717; PDB:2V5NA CQVTNPSTGHLFDLSSLSGRAGFTAAYSEKGLVYSICGENENCPPGVGACFGQTRISVGK 1-----------------------------------1-----2------2---------- ANKRLRYVDQVLQLVYKDGSPCPSKSGLSYKSVISFVCRPEAGPTNRPLISLDKQTCTLF ---------------------3---------------4------------------3--- FSWHTPLACEQATECSVRNGSSIVDLSPLIHRTGGYEAYNPDFYINICQPLNPHAVPCPA --------4-----5--------------------------------5---------6-- GAAVCKVPIDGPPIDIGRVAGPPILNPIANEIYLNFESSTPCLADKHFNYTSLIAFHCKR ----6------------------------------------7---------------8-- GVSGTPKLLRTSECDFVFEWETPVVCPD -------------7-----------8-- >BONE MORPHOGENETIC PROTEIN RECEPTOR TYPE IA; SWP:P36894; PDB:2QJ9D TLPFLKCYCSGHCPDDAINNTCITNGHCFAIIEEDDQGETTLASGCMKYEGSDFQCRDTP ------1-2---2--------3-----1-----------------3---------4---- IPHQRRSIECCRTNLCNQYLQPTLPPVVIGPFF ---------45----5----------------- >DIPEPTYDIL-PEPTIDASE I LIGHT CHAIN; SWP:P53634; PDB:1K3BB LPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVS ------------------------1----------------------------------- CSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGG 2------1----------------------3---------2-----3------------- FYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLR -------------------------------------------- >Toll-like receptor 2, Variable lymphocyte receptor B; SWP:O60603; PDB:2Z7XA SLSCDRNGICKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSN ---1-----1-------------------------------------------------- GINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFS ------------------------------------------------------------ HLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILH ------------------------------------------------------------ MKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESL ------------------------------------------------------------ FQVMKLLNQISGLLELEFDDCTLNGVGNFRASDNDRVIDPGKVETLTIRRLHIPRFYLFY ------------------------------------------------------------ DLSTLYSLTERVKRITVENSKVFLVPCLLSQHLKSLEYLDLSENLMVEEYLKNSACEDAW --------------------------2----------------------------2---- PSLQTLILRQNHLASLEKTGETLLTLKNLTNIDISKNSFHSMPETCQWPEKMKYLNLSST ---------------------------------------------3-------------- RIHSVTGCIPKTLEILDVSNNNLNLFSLNLPQLKELYISRNKLMTLPDASLLPMLLVLKI -------3---------------------------------------------------- SRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKCSGSG ------------------------------4-5----------------------4---- KPVRSIICP -------5- >Coagulation factor X-activating enzyme light chain 1; SWP:Q4PRD1; PDB:2E3XC DCPSGWLSYEQHCYKGFNDLKNWTDAEKFCTEQKKGSHLVSLHSREEEKFVVNLISENLE -1----------1----------------2------------------------------ YPATWIGLGNMWKDCRMEWSDRGNVKYKALAEESYCLIMITHEKVWKSMTCNFIAPVVCK -----------------------------------3--------------3-------2- >FAB LIGHT CHAIN; SWP:NA; PDB:3CMOL DIVMTQSSSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVELLIYYTSRLQSGVPS ----------------------1------------------------------------- RFSGSGSGSDYSLTISNLVPEDIATYYCQQYSKLFTFGSGTKLEIKRADAAPTVSIFPPS ---------------------------1-------------------------------- SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTL ------------2----------------------------------------------- TKDEYERHNSYTCEATHKTSTSPIVKSFNR ------------2----------------- >CLASS A BETA-LACTAMASE SED1; SWP:Q93PQ0; PDB:3BFCA VQQVQKKLAALEKQSGGRLGVALINTADNSQVLYRADERFAMCSTSKVMTAAAVLKQSET ------------------------------------------1----------------- HDGILQQKMTIKKADLTNWNPVTEKYVGNTMTLAELSAATLQYSDNTAMNKLLAHLGGPG ------------------------------------------------------------ NVTAFARSIGDTTFRLDRKEPELNTAIPGDERDTTSPLAMAKSLRKLTLGDALAGPQRAQ ------------------------------------------------------------ LVDWLKGNTTGGQSIRAGLPAHWVVGDKTGACDYGTTNDIAVIWPEDRAPLVLVTYFTQP -------------------------------1---------------------------- QQDAKWRKDVLAAAAKIVTEGK ---------------------- >GRANZYME A; SWP:P12544; PDB:1OP8A IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLNKRSQVILGAHSITRE -------------------------1---------------1------------------ EPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMC ------------------------------------------------------------ QVAGWGRTHNSASWSDTLREVNITIIDRKVCNDRN ----------------------------------- >DIAPAUSIN; SWP:Q8T0W8; PDB:2E2FA AVRIGPCDQVCPRIVPERHECCRAHGRSGYAYCSGGGMYCN ------1---2---------13----------2------3- >Low-density lipoprotein receptor-related protein 2; SWP:P98158; PDB:2I1PA GAMVLNCTSAQFKCADGSSCINSRYRCDGVYDCRDNSDEAGCPTRPPG ------1------2-----1------3-----2--------3------ >ERGIC-53 PROTEIN; SWP:Q62902; PDB:1R1ZA HHHHSSGLVPRGSHMAGTQAHRRFEYKYSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRI ------------------------------------------------------------ APSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGRIGADGLAIWYTENQGLDGPVFGSAD ------------------------------------------------------------ MWNGVGIFFDSFDNDGKKNNPAIVVVGNNGQINYDHQNDGATQALASCQRDFRNKPYPVR -----------------------------------------------1------------ AKITYYQKTLTVMINNGFTPDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSF ---------------------------1-------------------------------- LTFQLTE ------- >NEW ANTIGEN RECEPTOR VARIABLE DOMAIN; SWP:NA; PDB:2YWZA AWVDQTPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVD ---------------------1------2------------------------------- KGSKSFSLRISDLRVEDSGTYKCQADYSPSCYSYPSLESAVEGAGTVLTVK ----------------------1-------2-------------------- >PHEROMONE-BINDING PROTEIN; SWP:P20797; PDB:1QWVA SPEIMKNLSNNFGKAMDQCKDELSLPDSVVADLYNFWKDDYVMTDRLAGCAINCLATKLD ------------------1------------------------------2---1------ VVDPDGNLHHGNAKDFAMKHGADETMAQQLVDIIHGCEKSAPPNDDKCMKTIDVAMCFKK ------------------------------------3----------2--------3--- EIHKLNWVPNMDLVIGEVLAEV ---------------------- >MAJOR ENVELOPE GLYCOPROTEIN; SWP:P17501; PDB:3DUZA EHCNAQMKTGPYKIKNLDITPPKETLQKDVEITIVETDYNENVIIGYKGYYQAYAYNGGS ------------------------------------------------------------ LDPNTRVEETMKTLNVGKEDLLMWSIRQQCEVGEELIDRWGSDSDDCFRDNEGRGQWVKG -----------------------------1----------------2------------- KELVKRQNNNHFAHHTCNKSWRCGISTSKMYSRLECQDDTDECQVYILDAEGNPINVTVD ----------------2-----1------------3------3----------------- TVLHRDGVSMILKQKSTFTTRQIKAACLLIKDDKNNPESVTREHCLIDNDIYDLSKNTWN --------------------------4-----------------4--------------- CKFNRCIKRKRAKYTEGDTATKGDLMHIQEELMYENDLLKMNIELMHAHINKLNNMLHDL 5----5------------------------------------------------------ IVSVAKVDERLIGNLMNNSVSSTFLSDDTFLLMPCTNPPAHTSNCYNNSIYKEGRWSSQC --------------------------------------------6--------------6 IDFSNYKELAIDDDVEFWIPTIGNTTYHDSWKDASGWSFIAQQKSNLITTMENTKFGG ---------------------------------------------------------- >IGG1 PFC' FC; SWP:NA; PDB:1PFCA RTISKAKGPPRIPEVYLLPPPRNELSKKKVSLTCMITGFYPADINVEWDSSEPSDYKNTP ---------------------------------1-------------------------- PVFDTDGSFFLYSRLKVDTDAWNNGESFTCSVMHEALPNHVIQKSISRSPG -----------------------------1--------------------- >BETA-2-MICROGLOBULIN; SWP:P21611; PDB:3BEVB MDLTPKVQVYSRFPASAGTKNVLNCFAAGFHPPKISITLMKDGVPMEGAQYSDMSFNDDW ------------------------1----------------------------------- TFQRLVHADFTPSSGSTYACKVEHETLKEPQVYKWDPEF -------------------1------------------- >LEUKEMIA INHIBITORY FACTOR RECEPTOR; SWP:P42703; PDB:2Q7NA DLKCTTNNMRVWDCTWPAPLGVSPGTVKDICIKDRFHSCHPLETTNVKIPALSPGDHEVT ---1---------1----------------2-------2--------------------- INYLNGFQSKFTLNEKDVSLIPETPEILDLSADFFTSSLLLKWNDRGSALPHPSNATWEI ------------------------------------------------------------ KVLQNPRTEPVALVLLNTMLSGKDTVQHWNWTSDLPLQCATHSVSIRWHIDSPHFSGYKE --------------------------------------3--------------------- WSDWSPLKNISWIRNTETNVFPQDKVVLAGSNMTICCMSPTKVLSGQIGNTLRPLIHLYG -----------------------------------3------------------------ QTVAIHILNIPVSENSGTNIIFITDDDVYGTVVFAGYPPDVPQKLSCETHDLKEIICSWN ----------------------------------------------4---------4--- PGRITGLVGPRNTEYTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRN ------------------------------------------------------------ PLGQAQSAVVINVTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKAN ---------------------------------------------------5-------- SKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSSKTFWKWSRWSDEKRHLTTEAT ------------------------------------5----------------------- >ALPHA-LACTALBUMIN; SWP:P12065; PDB:1ALCA KQFTKCELSQNLYDIDGYGRIALPELICTMFHTSGYDTQAIVENDESTEYGLFQISNALW -----1---------------------2-------------------------------- CKSSQSPQSRNICDITCDKFLDDDITDDIMCAKKILDIKGIDYWIAHKALCTEKLEQWLC 3-----------4---3-------------4-------------------2--------1 EK -- >BISPECIFIC ALPHA/BETA TCR; SWP:NA; PDB:2P1YA AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPD --------------------1--------------------------------------- GYKASRPSQENFSLILELATPSQTSVYFCASGDRLFFGHGTKLSVLGSADDAKKDAAKKD ----------------------------1------------------------------- GQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGR ---------------------2-------------------------------------- FTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTNAYKVIFGKGTHLHVLP ----------------------------2---------------------- >HEMAGGLUTININ-NEURAMINIDASE; SWP:Q9IH62; PDB:2VSMA ICLQKTSNQILKPKLISYTLGQSGTCITDPLLAMDEGYFAYSHLERIGSCSRGVSKQRII -1-----------------------2-----------------------2---------- GVGEVLDRGDEVPSLFMTNVWTPPNPNTVYHCSAVYNNEFYYVLCAVSTVGDPILNSTYW -------------------------------3------------3--------------- SGSLMMTRLAVKPKSNGGGYNQHQLALRSIEKGRYDKVMPYGPSGIKQGDTLYFPAVGFL ------------------------------------------------------------ VRTEFKYNDSNCPITKCQYSKPENCRLSMGIRPNSHYILRSGLLKYNLSDGENPKVVFIE -----------4----5-------4----------------------------------- ISDQRLSIGSPSKIYDSLGQPVFYQASFSWDTMIKFGDVLTVNPLVVNWRNNTVISRPGQ ------------------------------------------------------------ SQCPRFNTCPEICWEGVYNDAFLIDRINWISAGVFLDSNQTAENPVFTVFKDNEILYRAQ --6-----5---6----------------------------------------------- LASEDTNAQKTITNCFLLKNKIWCISLVEIYDTGDNVIRPKLFAVKIPEQCTH --------------7--------7--------------------------1-- >C-TYPE NATRIURETIC PEPTIDE; SWP:P23582; PDB:1JDPH GCFGLKLDRIGSMSGLGC -1---------------1 >TERATOCARCINOMA-DERIVED GROWTH FACTOR; SWP:NA; PDB:2J5HA KEHCGSILHGTWLPKKCSLCRCWHGQLHCLPQTFLPGCD ---1------------2--3-1------3--------2- >influenza virus infectivity neutralizing antibody (light chain); SWP:NA; PDB:1KENL QIVLTQSPAIMSASPGEKVTLTCSASSTITSSFLYWYQQKPGSSPKLWIYSTSNLASGVP ----------------------1------------------------------------- ARFSGSGSGTSYSLTISSLEAEDGASYFCHQWETFPRTFGGGTKLEIKRADAAPTVSIFP ----------------------------1------------------------------- PSKIQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTL --------------2--------------------------------------------- TLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN --------------2------------------ >CELLULOSE 1,4-BETA-CELLOBIOSIDASE; SWP:Q8J0K6; PDB:2RFWA RAGNETPENHPPLTWQRCTAPGNCQTVNAEVVIDANWRWLHDDNMQNCYDGNQWTNACST -----------------1-----1-----------------------2---------3-- ATDCAEKCMIEGAGDYLGTYGASTSGDALTLKFVTKHEYGTNVGSRFYLMNGPDKYQMFN ---3---2---------------------------------------------------- LMGNELAFDVDLSTVECGINSALYFVAMEEDGGMASYPSNQAGARYGTGYCDAQCARDLK ----------------4---------------------------------5---6----- FVGGKANIEGWKSSTSDPNAGVGPYGSCCAEIDVWESNAYAFAFTPHACTTNEYHVCETT ---------------------------65-------------------7-------8--- NCGGTYSEDRFAGKCDANGCDYNPYRMGNPDFYGKGKTLDTSRKFTVVSRFEENKLSQYF -8------------7----9---------------------------------------- IQDGRKIEIPPPTWEGMPNSSEITPELCSTMFDVFNDRNRFEEVGGFEQLNNALRVPMVL ---------------------------9-------------------------------- VMSIWDDHYANMLWLDSIYPPEKEGQPGAARGDCPTDSGVPAEVEAQFPDAQVVWSNIRF ---------------------------------4-------------------------- GPIGSTYDF --------- >TRIGGERING RECEPTOR EXPRESSED ON MYELOID CELLS 1; SWP:Q9NP99; PDB:1Q8MA MELRAATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSK -------------------------1---------------------------------- NSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVTL -------------------------------------1---------------------- E - >ARAGONITE PROTEIN AP7; SWP:Q9BP37; PDB:2JYPA TRHSFRRPFHECALCYSITDPGERQRCIDMYCSYTN --------------1-----------1--------- >PROD1; SWP:NA; PDB:2JVEA MALKCFTRNGDDRTVTTCAEEQTRCLFVQLPYSEIQECKTVQQCAEVLEEVTAIGYPAKC ----1------------2------1------------2-----3---------------3 CCEDLCNRSEQ 4----4----- >ANTIBODY HEAVY CHAIN; SWP:NA; PDB:2NR6D EIQLQQSGAELVKPGASVKLSCTASGFNIKDTYIHWVKQRPEQGLEWIGRIDPANGNTRY ---------------------1-------------------------------------- GPKFLGKATITADTSSNTAYLHLNSLTSEDTAVYFCARWVRQMDYWGQGTSVTVSSAKTT -----------------------------------1------------------------ PPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL ----------------------2------------------------------------- SSSVTVPSSTWPSETVTCNVAHPASSTKVDKKI -----------------2--------------- >AMARANTHUS CAUDATUS ANTIMICROBIAL PEPTIDE 2; SWP:NA; PDB:1ZNTA VGECVRGRCPSGMCCSQGCGKGPKYCGR ---1----2----31---2------3-- >L-SELECTIN; SWP:P14151; PDB:3CFWA WTYHYSEKPMNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSRSYYWIGIRKIGGIW ------------------1----------------------------------------- TWVGTNKSLTEEAENWGDGEPNNKKNKEDCVEIYIKRNKDAGKWNDDACHKLKAALCYTA -----------------------------2------------------2-------1--- SCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQFV -3----4-----3--------4-5--------5--- >PECTATE LYASE II; SWP:Q8P6Z9; PDB:2QX3A GPVGYGAATTGGGNKVPVNVATFEAMQSAIDSYSGSGGLVLNYTGKFDFGTIKDVCAQWK -------------------------------------------------------1---- LPAKTVQIKNKSDVTIKGANGSAANFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEG ------------------------------------------------------------ NSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALN ----------------------1------------------------------------- GYSDSDTKNSAARTTYHHNRFENVESRVPLQRRGLSHIYNNYFNNVTTSGINVRMGGIAK ------------------------------------------------------------ IESNYFENIKNPVTSRDSSEIGYWDLINNYVGSGITWGTPDGSKPYANATNWISTKVFPE ------------------------------------------------------------ SLGYIYTVTPAAQVKAKVIATAGAGKNLAE ------------------------------ >BONE MORPHOGENETIC PROTEIN RECEPTOR TYPE-2; SWP:Q4ZG08; PDB:2HLQA ALCAFKDPYQQDLGIGESRISHENGTILCSKGSTCYGLWEKSKGDINLVKQGCWSHIGDP --1-------------------------2-----1-----------------2------- QECHYEECVVTTTPPSIQNGTYRFCCCSTDLCNVNFTENF --3----4----------------435----5-------- >INSULIN-LIKE PEPTIDE INSL5; SWP:Q9Y5Q6; PDB:2K1VA DLQTLCCTDGCSMTDLSALC -----1----1--------- >DISPERSIN; SWP:NA; PDB:2JVUA GGSGWNADNVDPSQCIKQSGVQYTYNSGVSVCMQGLNEGKVRGVSVSGVFYYNDGTTSNF --------------1----------------1---------------------------- KGVVTPSTPVNTNQDINKTNKVGVQKYRALTEWVGSRS -------------------------------------- >PROCARBOXYPEPTIDASE A PCPB; SWP:NA; PDB:1PCAB ARTTSTFNYATYHTLEEIYDFMDILVAEHPALVSKLQIGRSYEGRPIYVLKFSTGGSNRP ------------------------------------------------------------ AIWIDSGIHSREWITQASGVWFAKKITENYGQNSSFTAILDSMDIFLEIVTNPNGFAFTH ------------------------------------------------------------ SDNRLWRKTRSKASGSLCVGSDSNRNWDAGFGGAGASSSPCAETYHGKYPNSEVEVKSIT -----------------1----------------------1------------------- DFVKNNGNIKAFISIHSYSQLLLYPYGYKTQSPADKSELNQIAKSAVAALKSLYGTSYKY ------------------------------------------------------------ GSIITVIYQASGGVIDWTYNQGIKYSFSFELRDTGRRGFLLPASQIIPTAQETWLALLTI ------------------------------------------------------------ MEHTLNNS -------- >KAPPA-HEFUTOXIN 1; SWP:P82850; PDB:1HP9A GHACYRNCWREGNDEETCKERC ---1---2---------2---1 >CCL14; SWP:Q16627; PDB:2Q8RE GPYHPSECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYI -------12----------------------1---------------2------------ KDMKEN ------ >PROTEIN LP49; SWP:Q8F0X1; PDB:3BWSA GTEIVKFSIHPYKGTVIRLGEEILPFKVLEMDKNIALVEAIPVYKDEKEIELKLSSPGFQ ------------------------------------------------------------ NSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDEGDV ------------------------------------------------------------ LDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQQANAVHVFDLKTLAYKATVDL ------------------------------------------------------------ TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELY ------------------------------------------------------------ IAQFSASNQESGGGRLGIYSDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDCCSKIEVYD ---------------------------------------------------11------- LKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD ------------------------------------------------------------ TVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDGF ------------------------------------------ >VALPHA14 TCR; SWP:NA; PDB:2Q86A KTQVEQSPQSLVVRQGENCVLQCNYSVTPDNHLRWYKQDTGKGLVLLTVLVDQKDKTSNG ----------------------1------------------------------------- RYSATLDKDAKHSTLHITATLLDDTATYFCVVGDRGSALFGSGTQLIVIPYIQNPEPAVY -----------------------------1------------------------------ QLKDPRSQDSTLCLFTDFDSQINVPKTMESGTFITDKCVLDMKSKSNGAIAWSNQTSFTC ------------2----------------------------------------------2 QDIFKETNA --------- >Anti-coagulant protein 5; SWP:Q16940; PDB:2P3FN YPECGENEWLDDCGTQKPCEAKCNEEPPEEEDPICRSRGCLLPPACVCKDGFYRDTVIGD ---1--------2-----3---4-----------3----2-----1-5------------ CVREEECDQHEIIH 5-----4------- >FIBRONECTIN; SWP:P02751; PDB:1O9AA SKPGCYDNGKHYQINQQWERTYLGNALVCTCYGGSRGFNCESKPEAEETCFDKYTGNTYR ----1-----------------------2-1--------2---------3---------- VGDTYERPKDSMIWDCTCIGAGRGRISCTIANR ---------------4-3---------4----- >DELTA-PALUTOXIN IT1; SWP:P83256; PDB:1V90A GCLGEGEKCADWSGPSCCDGFYCSCRSMPYCRCRNNS -1------2-------31----2-4-----4-3---- >TISSUE FACTOR; SWP:P13726; PDB:3ELAT TVAAYNLTWKSTNFKTILEWEPKPVNQVYTVQISTKSGDWKSKCFYTTDTECDLTDEIVK -------------------------------------------1-------1-------- DVKQTYLARVFSYPAGNVESTGSAGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVNV ------------------------------------------------------------ TVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKTAKTNTNEFLIDVCFSVQAVIPSRTV -----------------------------------------------2------------ NRKSTDSPVEC ----------2 >OMEGA-CONOTOXIN TXVII; SWP:P56714; PDB:1F3KA CKQADEPCDVFSLDCCTGICLGVCMW 1------2------31---2---3-- >INSULIN; SWP:P01317; PDB:2BN3A GIVEQCCTSVCSLYQLENYCN -----1----1---------- >LITHOSTATHINE; SWP:P05451; PDB:1LITA CPEGTNAYRSYCYYFNEDRETWVDADLYCQNMNSGNLVSVLTQAEGAFVASLIKESGTDD 1----------1----------------2------------------------------- FNVWIGLHDPKKNRRWHWSSGSLVSYKSWGIGAPSSVNPGYCVSLTSSTGFQKWKDVPCE -----------------------------------------3----------------3- DKFSFVCKFKN ------2---- >MAJOR PRION PROTEIN; SWP:P04925; PDB:1AG2A GLGGYMLGSAMSRPMIHFGNDWEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNIT -------------------------------------------------------1---- IKQHTVTTTTKGENFTETDVKMMERVVEQMCVTQYQKESQAYY ------------------------------1------------ >Light chain of Fab 1A1D-2; SWP:NA; PDB:2R29L DIVLTQSPASLAVSLGQRATISCRASESVVRYGNSFMHWYQQKPGQPPKLLIYRASSLES ----------------------1------------------------------------- GIPTRFSGSGSRTDFTLTINPVEADDVATYYCQQTNVDPWAFGGGTKLEIKRADAAPTVS -------------------------------1---------------------------- IFPPSSLTSGGASVVCFLNNFYPKDINVKWKIDRQNGVLNSWTDQDSTYSMSSTLTLTKD ---------------2-------------------------------------------- EYERHNSYTCEATSPIVKSFNRNE ---------2-------------- >Amyloidogenic immunoglobulin light chain protein AL-09; SWP:NA; PDB:2Q1EA TDIQMTQSPSSLSASVGDRVTITCQASQDINNYLIWYQQKPGQAPKLLIYDASTLETGVP -----------------------1------------------------------------ SRFSGSGSGTEFTFTISSLQPEDLATYHCQQYDNLPYTFGQGTKLEIK ----------------------------1------------------- >VITRONECTIN; SWP:P04004; PDB:1OC0B ESCKGRCTEGFNVDKKCQCDELCSYYQSCCTDYTAEC --1---2---------3-1---4-----43------2 >osteocalcin; SWP:Q8HYY9; PDB:1Q8HA PDPLPRRVCLNPDCDELADHIGFQEAYRRFYGIA --------1----1-------------------- >KALATA B1; SWP:P56254; PDB:1N1UA AGETCVGGTCNTPGATCSWPVCTRNGLPV ----1----2------1----2------- >MUSCARINIC M1-TOXIN1; SWP:Q8QGR0; PDB:2VLWA LTCVKSNSIWFPTSEDCPDGQNLCFKRWQYISPRMYDFTRGCAATCPKAERDVINCCGTD --1-------------2------1-----------------2---3---------34--- KCNK -4-- >CYANOVIRIN-N; SWP:P81180; PDB:1LOMA LGKFSQTCYNSAIQGSVLTSTCERTNGGYNTSSIDLNSVIENVDGSLKWQSPNFIETCRN -------1-------------1-----------------------------------2-- TQLAGSSELAAECKTRAQQFVSTKINLDDHIANIDGTLKYE ------------2---------------------------- >CONOTOXIN Y-PIIIE; SWP:P56529; PDB:1AS5A HCCLYGKCRRYGCSSASCCQR -12----3----1----23-- >SPIKE GLYCOPROTEIN E1; SWP:P03316; PDB:1LD4M YEHATTVPNVPQIPYKALVERAGYAPLNLEITVMSSEVLPSTNQEYITCKFTTVVPSPKI ------------------------------------------------------------ KCCGSLECQPAAHADYTCKVFGGVYPFMWGGAQCFCDSENSQMSEAYVELSADCASDHAQ --1--------------------------------1------------------------ AIKVHTAAMKVGLRIVYGNTTSFLDVYVNGVTPGTSKDLKVIAGPISASFTPFDHKVVIH ------------------------------------------------------------ RGLVYNYDFPEYGAMKPGAFGDIQATSLTSKDLIASTDIRLLKPSAKNVHVPYTQASSGF ------------------------------------------------------------ EMWKNNSGRPLQETAPFGCKIAVNPLRAVDCSYGNIPISIDIPNAAFIRTSDAPLVSTVK ------------------2-----------2----------------------------- CEVSECTYSMATLQYVSDREGQCPVHSHSSTATLQESTVHVTVHFSTASPQANFI ------------------------------------------------------- >MEGF/TGFALPHA44-50 CHIMERA; SWP:P01132; PDB:1GK5A NSYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCEHADLLA -----1-------2-----1----------2-3--------3------- >TIME INTERVAL MEASURING ENZYME TIME; SWP:Q08J22; PDB:2E46A MHHGFTTPSRAIAVLSTETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSG ------------------------------------------------------------ GCLSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGR -1---------------------------------------------------------- AVVLHEKADDYGKSDHPDSRKTGNAGGRVACGVIGIL ------------------------------1------ >SUPEROXIDE DISMUTASE; SWP:NA; PDB:2Q2LA MAKGVAVLSSSEGVAGTILFTQEGDGPTTVTGNISGLKPGLHGFHVHALGDTTNGCMSTG -------------------------------------------------------1---- PHFNPAGKEHGSPEDETRHAGDLGNITVGDDGTACFTIVDKQIPLTGPHSIIGRAVVVHA ------------------------------------------------------------ DPDDLGKGGHELSKSTGNAGGRIACGIIGLQG ------------------------1------- >DEFENSIN, MUTANT DEF-BAT; SWP:Q17027; PDB:2E3FA ATCDLASFSSQWVTPNDSLCAAHCIARRYRGGYCNGKRVCVCR --1----------------2---3---------1-----2-3- >PROTEIN-GLUTAMINASE; SWP:Q9AQQ8; PDB:2Z8TX LASVIPDVATLNSLFNQIKNQSCGTSTASSPCITFRYPVDGCYARAHKMRQILMNNGYDC ----------------------1--------1---------------------------- EKQFVYGNLKASTGTCCVAWSYHVAILVSYKNASGVTEKRIIDPSLFSSGPVTDTAWRNA ---------------23------------------------------------------- CVNTSCGSASVSSYANTAGNVYYRSPSNSYLYDNNLINTNCVLTKFSLLSGCSPSPAPDV -----3----------------------------------4----------2-------- SSCGF --4-- >DERMONECROTIC TOXIN; SWP:P17452; PDB:2EBFX LGGSPYSPFRIGLEGVWTPEVLKARASVIGKPIGESYKRILAKLQRIHNSNILDERQGLM ------------------------------------------------------------ HELMELIDLYEESQPSSERLNAFRELRTQLEKALYLPEMEALKKQILQIPNKGSGAARFL ------------------------------------------------------------ LRTAMNEMAGKTSESTADLIRFALQDTVISAPFRGYAGAIPEAIDFPVKYVIEDISVFDK ------------------------------------------------------------ IQTNYWELPAYESWNEGSNSALLPGLLRESQSKGMLSKCRIIENSLYIGHSYEEMFYSIS ------------------------------------------------------------ PYSNQVGGPYELYPFTFFSMLQEVQGDLGFEQAFATRNFFNTLVSDRLSLMENTMLLTES ------------------------------------------------------------ FDYTPWDAIYGDINYDEQFAAMSINERIEKCMNTYRGVAFQNSSKSIDFFLNNLTTFIDN ------------------------------------------------------------ GLTEIAISDLPYDIVQQEISQFLQGSNEWKTLDAMLFNLDKGDINGAFRKLLQSAKDNNI ------------------------------------------------------------ KFRAIGHSDNSVPPFNNPYKSLYYKGNIIAEAIEKLDREGQKFVVFADSSLLNSTPGTGR ------------------------------------------------------------ PMPGLVQYLKIPATVVDSDGAWQFLPDVASSRVPIEVTELENWQVLTPPQGKILGLKQFK ------------------------------------------------------------ LTAGFPTEQSRLPLLENSVSEDLREELMQKIDAIKNDVKMNSLVCMEAGSCDSVSPKVAA --------------------------------------------1-----1--------- RLKDMGLEAGMGASITWWRREGGMEFSHQMHTTASFKFAGKEFAVDASHLQFVHDQLDTT ------------------------------------------------------------ ILILPVDDWALEIAQRNRAINPFVEYVSKTGNMLALFMPPLFTKPRLTRAL --------------------------------------------------- >BMP02 NEUROTOXIN; SWP:Q9NJP7; PDB:1DU9A VGCEECPMHCKGKNAKPTCDDGVCNCNV --1--2---3--------1----2-3-- >THIOREDOXIN; SWP:Q9U1G7; PDB:2VIMA MRVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQ ------------------------------1--1-------------------------- NEEAAAKYSVTAMPTFVFIKDGKEVDRFSGANETKLRETITRHK -------------------------------------------- >GAEGURIN-4; SWP:P80398; PDB:2G9LA GILDTLKQFAKGVGKDLVKGAAQGVLSTVSCKLAKTC ------------------------------1-----1 >ACETYLCHOLINE RECEPTOR PROTEIN; SWP:P02711; PDB:1L4WB EERGWKHWVYYTCCPDTPYLDITEE ------------11----------- >PANCREATIC TRYPSIN INHIBITOR; SWP:P00974; PDB:1LD6A RPDFCLEPPYAGACRAAAARYFYNAKAGLCQTFAYGACAAKRNNFKSAEDCLRTCGGA ----1--------2---------------3-------2------------3---1--- >KIT LIGAND; SWP:P20826; PDB:2O26A ICGNPVTDNVKDITKLVANLPNDYMITLNYVAGMDVLPSHCWLRDMVIQLSLSLTTLLDK -1--------------------------------------2------------------- FSNISEGLSNYSIIDKLGKIVDDLVLCMEENAPKNIKESPKRPETRSFTPEEFFSIFNRS --------------------------1--------------------------------- IDAFKDFMVASDTSDCVLSHHHHH ---------------2-------- >MANNAN-BINDING LECTIN SERINE PROTEASE 2; SWP:O00187; PDB:1Q3XA TIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCEADGFWTSS ----1-----------------------------2---------------1--------- KGEKSLPVCEPVCGLSARTIYGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAV --------2---3----------------------------------------------- YEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVIN ------------------------------------------------------------ SNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKP ------3---------------------------------------------4------- PYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQ ------------4----------5------------------------------5----- YGVYTKVINYIPWIENIISDF --------------------- >ABC TRANSPORTER ATP-BINDING PROTEIN; SWP:Q9UZA4; PDB:3BK7A MVRKMRIAVIDYDKCNPDKCGHFLCERVCPVNRMGGEAIIIDEENYKPIIQEASCTGCGI ------------------------------------------------------------ CVHKCPFNAISIVNLPEQLDEDCVHRYGVNAFVLYRLPIVKDGMVVGIVGPNGTGKTTAV ----------------------1------------------------------------- KILAGQLIPNLCEDNDSWDNVIRAFRGNELQNYFERLKNGEIRPVVKPQYVDLLPKAVKG -----------1------------------------------------------------ KVRELLKKVDEVGKFEEVVKELELENVLDRELHQLSGGELQRVAIAAALLRKAHFYFFDE ------------------------------------------------------------ PSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVVYGEPGVYGIFSKP ------------------------------------------------------------ KGTRNGINEFLQGYLKDENVRFRPYEIRFTKLSERVDVERETLVEYPRLVKDYGSFKLEV ------------------------------------------------------------ EPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLTVAYKPQYIKAEYEGTV ------------------------------------------------------------ YELLSKIDSSKLNSNFYKTELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLRDADIYL ------------------------------------------------------------ LDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGRHGR ------------------------------------------------------------ ALPPMGMREGMNRFLASVGITFRRDPDSGRPRANKEGSVKDREQKARGEYYYA ----------------------------------------------------- >SMALL-INDUCIBLE CYTOKINE A13; SWP:Q99616; PDB:2RA4A DALNVPSTCCFTFSSKKISLQRLKSYVITTSRCPQKAVIFRTKLGKEICADPKEKWVQNY --------12----------------------1---------------2----------- MKHLG ----- >BETA-1,4-MANNANASE; SWP:Q5PSP8; PDB:2QHAA HTVSPVNPNAQQTTKTVMNWLAHLPNRTENRVLSGAFGGYSHDTFSMAEADRIRSATGQS ------------------------------------------------------------ PAIYGCDYARGWLETANIEDSIDVSCNSDLMSYWKNGGIPQISLHLANPAFQSGHFKTPI -----1-------------------1---------------------------------- TNDQYKKILDSSTAEGKRLNAMLSKIADGLQELENQGVPVLFRPLHEMNGEWFWWGLTSY ------------------------------------------------------------ NQKDNERISLYKQLYKKIYHYMTDTRGLDHLIWVYSPDANRDFKTDFYPGASYVDIVGLD ------------------------------------------------------------ AYFQDAYSINGYDQLTALNKPFAFTEVGPQTANGSFDYSLFINAIKQRYPKTIYFLAWND ------------------------------------------------------------ EWSPAVNKGASALYHDSWTLNKGEIWNGDSLTPIVE ------------------------------------ >EPHRIN TYPE-A RECEPTOR 2; SWP:P29317; PDB:3C8XA KEVVLLDFAAALGWLTHPYGKGWDLMQNIMNDMPIYMYSVCNVMSGDQDNWLRTNWVYRG ----------------------------------------1------------------- EAERIFIELKFTVRDCNSFPGGASSCKETFNLYYAESDLDYGTNFQKRLFTKIDTIAPDH ---------------2---------2---------------------------------- VKLNVEERSVGPLTRKGFYLAFQDIGACVALLSVRVYYKK ---------------------------1------------ >PRO-SFTI-1; SWP:Q4GWU5; PDB:2AB9A GYKTSISTITIEDNGRCTKSIPPICFPDGRP ----------------1-------1------ >LEUKEMIA INHIBITORY FACTOR RECEPTOR; SWP:P42702; PDB:3E0GA DLKCVTNNLQVWQCSWKAPSGTGRGTDYEVCIEQRSRSCYQLEKTSIKIPALSHGDYEIT ---1---------1----------------2-------2--------------------- INSLHDFSKFTLNEQNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVIWEIK ------------------------------------------------------------ VLRKESMELVKLVTHQTTLNGKDTLHHWSWASDMPLECAIHFVEIRCYIDNLHFSGLEEW -------------------------------------3---------------------- SDWSPVKQISWIPDSQTKVFPQDKVILVGSDITFCCVSQEKVLSALIGHTNCPLIHLDGE ----------------------------------3------------------------- NVAIKIRNISVSASSGTNVVFTTEDNIFGTVIFAGYPPDTPQQLNCETHDLKEIICSWNP ---------------------------------------------4---------4---- GRVTALVGPRATSYTLVESFSGKYVRLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNP ------------------------------------------------------------ LGRSQSTILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNS --------------------------------------------------5--------- VQEQRNVTIQGVENSSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHLTTEAS -----------------------------------5----------------------- >MITOCHONDRIAL UBIQUINOL-CYTOCHROME C REDUCTASE; SWP:NA; PDB:3CWBE VHNDVTVPDFSAYRREDVMDATTSSQTSSEDRKGFSYLVTATACVATAYAAKNVVTQFIS ------------------------------------------------------------ SLSASADVLALSKIEIKLSDIPEGKNVAFKWRGKPLFVRHRTQAEINQEAEVDVSKLRDP ------------------------------------------------------------ QHDLDRVKKPEWVILVGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPAPYNL -----------------------1---------------1-------------------- EVPTYQFVGDDLVVVG ---------------- >PENAEIDIN-4D; SWP:Q962A7; PDB:1XV3A HSSGYTRPLRKPSRPIFIRPIGCDVCYGIPSSTARLCCFRYGDCCHL ----------------------1--2----------13-----23-- >GRANULIN-2; SWP:P28799; PDB:2JYVA AIQCPDSQFECPDFSTCCVMVDGSWGCCPMPQ ---1------2-----1---------2-----